Details for: HNRNPC

Gene ID: 3183

Symbol: HNRNPC

Ensembl ID: ENSG00000092199

Description: heterogeneous nuclear ribonucleoprotein C

Associated with

Cells (max top 100)

(Marker Score score is uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)

  • Cell Name: GABAergic neuron (CL0000617)
    Fold Change: 4.22
    Marker Score: 17585
  • Cell Name: cord blood hematopoietic stem cell (CL2000095)
    Fold Change: 4.18
    Marker Score: 3156.5
  • Cell Name: erythroid progenitor cell (CL0000038)
    Fold Change: 3.93
    Marker Score: 4095
  • Cell Name: fibroblast of mammary gland (CL0002555)
    Fold Change: 3.85
    Marker Score: 130970
  • Cell Name: radial glial cell (CL0000681)
    Fold Change: 3.82
    Marker Score: 1407
  • Cell Name: mesenchymal stem cell (CL0000134)
    Fold Change: 3.74
    Marker Score: 5753
  • Cell Name: mesodermal cell (CL0000222)
    Fold Change: 3.68
    Marker Score: 48484
  • Cell Name: basal cell of prostate epithelium (CL0002341)
    Fold Change: 3.58
    Marker Score: 8755
  • Cell Name: fibroblast of connective tissue of nonglandular part of prostate (CL1000304)
    Fold Change: 3.49
    Marker Score: 2975
  • Cell Name: skeletal muscle satellite stem cell (CL0008011)
    Fold Change: 3.37
    Marker Score: 3594.5
  • Cell Name: microfold cell of epithelium of small intestine (CL1000353)
    Fold Change: 3.34
    Marker Score: 799
  • Cell Name: mature T cell (CL0002419)
    Fold Change: 3.31
    Marker Score: 32810.5
  • Cell Name: thyroid follicular cell (CL0002258)
    Fold Change: 3.29
    Marker Score: 2577
  • Cell Name: erythroblast (CL0000765)
    Fold Change: 3.27
    Marker Score: 2043
  • Cell Name: chondrocyte (CL0000138)
    Fold Change: 3.26
    Marker Score: 1469
  • Cell Name: glycinergic neuron (CL1001509)
    Fold Change: 3.24
    Marker Score: 3910
  • Cell Name: decidual natural killer cell, human (CL0002343)
    Fold Change: 3.24
    Marker Score: 8939
  • Cell Name: interstitial cell of ovary (CL0002094)
    Fold Change: 3.17
    Marker Score: 20604.5
  • Cell Name: glycinergic amacrine cell (CL4030028)
    Fold Change: 3.14
    Marker Score: 2963
  • Cell Name: late pro-B cell (CL0002048)
    Fold Change: 3.14
    Marker Score: 3702
  • Cell Name: melanocyte (CL0000148)
    Fold Change: 3.13
    Marker Score: 1267
  • Cell Name: ependymal cell (CL0000065)
    Fold Change: 3.12
    Marker Score: 1088
  • Cell Name: type I NK T cell (CL0000921)
    Fold Change: 3.11
    Marker Score: 2442
  • Cell Name: alpha-beta T cell (CL0000789)
    Fold Change: 3.08
    Marker Score: 2331
  • Cell Name: kidney loop of Henle thin descending limb epithelial cell (CL1001111)
    Fold Change: 3.05
    Marker Score: 3293
  • Cell Name: CD8-positive, alpha-beta memory T cell, CD45RO-positive (CL0001203)
    Fold Change: 3.05
    Marker Score: 8556.5
  • Cell Name: Bergmann glial cell (CL0000644)
    Fold Change: 3.03
    Marker Score: 1235
  • Cell Name: kidney loop of Henle epithelial cell (CL1000909)
    Fold Change: 3.01
    Marker Score: 1885
  • Cell Name: cell in vitro (CL0001034)
    Fold Change: 3
    Marker Score: 104070
  • Cell Name: CD8-alpha-alpha-positive, alpha-beta intraepithelial T cell (CL0000915)
    Fold Change: 3
    Marker Score: 4249
  • Cell Name: mature alpha-beta T cell (CL0000791)
    Fold Change: 3
    Marker Score: 158595
  • Cell Name: germinal center B cell (CL0000844)
    Fold Change: 3
    Marker Score: 1823
  • Cell Name: epithelial cell of urethra (CL1000296)
    Fold Change: 3
    Marker Score: 2360
  • Cell Name: fibroblast of connective tissue of glandular part of prostate (CL1000305)
    Fold Change: 2.99
    Marker Score: 1245.5
  • Cell Name: mature gamma-delta T cell (CL0000800)
    Fold Change: 2.98
    Marker Score: 9418
  • Cell Name: podocyte (CL0000653)
    Fold Change: 2.98
    Marker Score: 1101
  • Cell Name: blood cell (CL0000081)
    Fold Change: 2.97
    Marker Score: 34543
  • Cell Name: malignant cell (CL0001064)
    Fold Change: 2.97
    Marker Score: 39855
  • Cell Name: CD4-positive helper T cell (CL0000492)
    Fold Change: 2.96
    Marker Score: 3215
  • Cell Name: naive B cell (CL0000788)
    Fold Change: 2.95
    Marker Score: 2633.5
  • Cell Name: CD14-positive, CD16-negative classical monocyte (CL0002057)
    Fold Change: 2.93
    Marker Score: 163726
  • Cell Name: endothelial cell of hepatic sinusoid (CL1000398)
    Fold Change: 2.92
    Marker Score: 639
  • Cell Name: theca cell (CL0000503)
    Fold Change: 2.92
    Marker Score: 2091
  • Cell Name: naive thymus-derived CD8-positive, alpha-beta T cell (CL0000900)
    Fold Change: 2.91
    Marker Score: 5197
  • Cell Name: ciliary muscle cell (CL1000443)
    Fold Change: 2.91
    Marker Score: 6383.5
  • Cell Name: epicardial adipocyte (CL1000309)
    Fold Change: 2.9
    Marker Score: 1409
  • Cell Name: neuroblast (sensu Vertebrata) (CL0000031)
    Fold Change: 2.9
    Marker Score: 1822
  • Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
    Fold Change: 2.88
    Marker Score: 11116
  • Cell Name: IgG-negative class switched memory B cell (CL0002117)
    Fold Change: 2.88
    Marker Score: 2837
  • Cell Name: retinal pigment epithelial cell (CL0002586)
    Fold Change: 2.87
    Marker Score: 845
  • Cell Name: Schwann cell (CL0002573)
    Fold Change: 2.86
    Marker Score: 993
  • Cell Name: pro-B cell (CL0000826)
    Fold Change: 2.86
    Marker Score: 2759
  • Cell Name: epithelial cell of uterus (CL0002149)
    Fold Change: 2.84
    Marker Score: 651
  • Cell Name: activated CD4-positive, alpha-beta T cell, human (CL0001043)
    Fold Change: 2.83
    Marker Score: 1286
  • Cell Name: effector CD8-positive, alpha-beta T cell (CL0001050)
    Fold Change: 2.82
    Marker Score: 2372
  • Cell Name: microglial cell (CL0000129)
    Fold Change: 2.82
    Marker Score: 5132
  • Cell Name: neural progenitor cell (CL0011020)
    Fold Change: 2.81
    Marker Score: 10878
  • Cell Name: basal cell (CL0000646)
    Fold Change: 2.81
    Marker Score: 3622
  • Cell Name: conjunctival epithelial cell (CL1000432)
    Fold Change: 2.81
    Marker Score: 2953
  • Cell Name: pigmented epithelial cell (CL0000529)
    Fold Change: 2.8
    Marker Score: 11739
  • Cell Name: supporting cell (CL0000630)
    Fold Change: 2.8
    Marker Score: 5265
  • Cell Name: luminal cell of prostate epithelium (CL0002340)
    Fold Change: 2.8
    Marker Score: 1628
  • Cell Name: myoepithelial cell of mammary gland (CL0002324)
    Fold Change: 2.79
    Marker Score: 13714.5
  • Cell Name: medullary thymic epithelial cell (CL0002365)
    Fold Change: 2.78
    Marker Score: 4567
  • Cell Name: myofibroblast cell (CL0000186)
    Fold Change: 2.78
    Marker Score: 3435
  • Cell Name: neutrophil (CL0000775)
    Fold Change: 2.78
    Marker Score: 1694
  • Cell Name: enteroendocrine cell of small intestine (CL0009006)
    Fold Change: 2.78
    Marker Score: 793
  • Cell Name: kidney interstitial fibroblast (CL1000692)
    Fold Change: 2.77
    Marker Score: 5325
  • Cell Name: epithelial cell of nephron (CL1000449)
    Fold Change: 2.76
    Marker Score: 5754
  • Cell Name: B-1 B cell (CL0000819)
    Fold Change: 2.75
    Marker Score: 4792.5
  • Cell Name: memory B cell (CL0000787)
    Fold Change: 2.74
    Marker Score: 2073
  • Cell Name: granulocyte (CL0000094)
    Fold Change: 2.74
    Marker Score: 1226
  • Cell Name: renal principal cell (CL0005009)
    Fold Change: 2.73
    Marker Score: 2105
  • Cell Name: choroid plexus epithelial cell (CL0000706)
    Fold Change: 2.73
    Marker Score: 2504.5
  • Cell Name: early pro-B cell (CL0002046)
    Fold Change: 2.72
    Marker Score: 27608
  • Cell Name: mesenchymal cell (CL0008019)
    Fold Change: 2.72
    Marker Score: 4626
  • Cell Name: mature NK T cell (CL0000814)
    Fold Change: 2.72
    Marker Score: 1260
  • Cell Name: tonsil germinal center B cell (CL2000006)
    Fold Change: 2.72
    Marker Score: 8064.5
  • Cell Name: stromal cell (CL0000499)
    Fold Change: 2.72
    Marker Score: 3184.5
  • Cell Name: pro-T cell (CL0000827)
    Fold Change: 2.72
    Marker Score: 11117.5
  • Cell Name: cortical cell of adrenal gland (CL0002097)
    Fold Change: 2.71
    Marker Score: 48142.5
  • Cell Name: endothelial tip cell (CL0000704)
    Fold Change: 2.71
    Marker Score: 631
  • Cell Name: muscle precursor cell (CL0000680)
    Fold Change: 2.7
    Marker Score: 700
  • Cell Name: gamma-delta T cell (CL0000798)
    Fold Change: 2.7
    Marker Score: 1814
  • Cell Name: DN3 thymocyte (CL0000807)
    Fold Change: 2.69
    Marker Score: 1346
  • Cell Name: centroblast (CL0009112)
    Fold Change: 2.69
    Marker Score: 1324
  • Cell Name: tendon cell (CL0000388)
    Fold Change: 2.68
    Marker Score: 660
  • Cell Name: granulosa cell (CL0000501)
    Fold Change: 2.68
    Marker Score: 26983
  • Cell Name: paneth cell of epithelium of small intestine (CL1000343)
    Fold Change: 2.68
    Marker Score: 664
  • Cell Name: lung neuroendocrine cell (CL1000223)
    Fold Change: 2.67
    Marker Score: 754
  • Cell Name: club cell (CL0000158)
    Fold Change: 2.66
    Marker Score: 3102
  • Cell Name: secretory cell (CL0000151)
    Fold Change: 2.65
    Marker Score: 4835
  • Cell Name: promonocyte (CL0000559)
    Fold Change: 2.65
    Marker Score: 1706
  • Cell Name: hepatocyte (CL0000182)
    Fold Change: 2.65
    Marker Score: 1807
  • Cell Name: Unknown (CL0000548)
    Fold Change: 2.65
    Marker Score: 1928
  • Cell Name: rod bipolar cell (CL0000751)
    Fold Change: 2.64
    Marker Score: 1380.5
  • Cell Name: hematopoietic stem cell (CL0000037)
    Fold Change: 2.64
    Marker Score: 1391
  • Cell Name: dendritic cell (CL0000451)
    Fold Change: 2.64
    Marker Score: 1811
  • Cell Name: fibroblast of breast (CL4006000)
    Fold Change: 2.64
    Marker Score: 1506
  • Cell Name: Sertoli cell (CL0000216)
    Fold Change: 2.64
    Marker Score: 15642

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Other Information

**Key characteristics:** * HNRNPC is a large protein (140 kDa) with a molecular weight of 140 kDa. * It is a multi-functional protein with multiple domains. * It is a key regulator of mRNA splicing and translation. * It is involved in the regulation of cell proliferation, differentiation, and apoptosis. * It is also involved in the regulation of inflammation and cancer. **Pathways and functions:** * HNRNPC is involved in the regulation of mRNA splicing and translation. It is a key factor in the formation of intron-containing pre-mRNAs, which are processed to produce mature mRNAs. * It also plays a role in the regulation of the Rhobtb1 gtpase cycle, which is involved in the production of the Rhobtb1 GTPase protein. * HNRNPC is also involved in the Rhobtb2 gtpase cycle, the Rhobtb gtpase cycle, the Rho gtpase cycle, and the Rna binding pathway. * It is involved in the regulation of cell proliferation, differentiation, and apoptosis. **Clinical significance:** HNRNPC is a key gene in human health. Mutations in HNRNPC genes have been linked to a number of diseases, including cancer, neurodegenerative diseases, and developmental disorders. * In cancer, HNRNPC mutations can lead to the activation of oncogenes and the formation of tumors. * In neurodegenerative diseases, HNRNPC mutations can lead to the accumulation of abnormal RNA species, which can disrupt normal cellular function. * HNRNPC is a promising target for the treatment of a variety of diseases.

Genular Protein ID: 2539948658

Symbol: HNRPC_HUMAN

Name: Heterogeneous nuclear ribonucleoproteins C1/C2

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 2557628

Title: Primary structures of the heterogeneous nuclear ribonucleoprotein A2, B1, and C2 proteins: a diversity of RNA binding proteins is generated by small peptide inserts.

PubMed ID: 2557628

DOI: 10.1073/pnas.86.24.9788

PubMed ID: 3110598

Title: Primary structure of human nuclear ribonucleoprotein particle C proteins: conservation of sequence and domain structures in heterogeneous nuclear RNA, mRNA, and pre-rRNA-binding proteins.

PubMed ID: 3110598

DOI: 10.1128/mcb.7.5.1731-1739.1987

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 2587210

Title: Primary structure differences between proteins C1 and C2 of HeLa 40S nuclear ribonucleoprotein particles.

PubMed ID: 2587210

DOI: 10.1093/nar/17.21.8441

PubMed ID: 8264621

Title: The C-protein tetramer binds 230 to 240 nucleotides of pre-mRNA and nucleates the assembly of 40S heterogeneous nuclear ribonucleoprotein particles.

PubMed ID: 8264621

DOI: 10.1128/mcb.14.1.518-533.1994

PubMed ID: 7567451

Title: A T to G mutation in the polypyrimidine tract of the second intron of the human beta-globin gene reduces in vitro splicing efficiency: evidence for an increased hnRNP C interaction.

PubMed ID: 7567451

DOI: 10.1093/nar/23.17.3419

PubMed ID: 11687588

Title: Nuclear DNA helicase II/RNA helicase A binds to filamentous actin.

PubMed ID: 11687588

DOI: 10.1074/jbc.m109393200

PubMed ID: 11991638

Title: Purification and characterization of native spliceosomes suitable for three-dimensional structural analysis.

PubMed ID: 11991638

DOI: 10.1017/s1355838202021088

PubMed ID: 12564933

Title: Basal and hydrogen peroxide stimulated sites of phosphorylation in heterogeneous nuclear ribonucleoprotein C1/C2.

PubMed ID: 12564933

DOI: 10.1021/bi0268091

PubMed ID: 12509468

Title: Heterogeneous nuclear ribonucleoprotein C modulates translation of c-myc mRNA in a cell cycle phase-dependent manner.

PubMed ID: 12509468

DOI: 10.1128/mcb.23.2.708-720.2003

PubMed ID: 14654843

Title: Proteomic characterization of the human centrosome by protein correlation profiling.

PubMed ID: 14654843

DOI: 10.1038/nature02166

PubMed ID: 15082759

Title: SUMO modification of heterogeneous nuclear ribonucleoproteins.

PubMed ID: 15082759

DOI: 10.1128/mcb.24.9.3623-3632.2004

PubMed ID: 16010978

Title: Regulation of urokinase receptor mRNA stability by hnRNP C in lung epithelial cells.

PubMed ID: 16010978

DOI: 10.1007/s11010-005-7644-2

PubMed ID: 17081983

Title: Global, in vivo, and site-specific phosphorylation dynamics in signaling networks.

PubMed ID: 17081983

DOI: 10.1016/j.cell.2006.09.026

PubMed ID: 16807684

Title: Phosphoproteomic analysis of the human pituitary.

PubMed ID: 16807684

DOI: 10.1007/s11102-006-8916-x

PubMed ID: 17693683

Title: Quantitative phosphoproteome profiling of Wnt3a-mediated signaling network: indicating the involvement of ribonucleoside-diphosphate reductase M2 subunit phosphorylation at residue serine 20 in canonical Wnt signal transduction.

PubMed ID: 17693683

DOI: 10.1074/mcp.m700120-mcp200

PubMed ID: 17289661

Title: Molecular composition of IMP1 ribonucleoprotein granules.

PubMed ID: 17289661

DOI: 10.1074/mcp.m600346-mcp200

PubMed ID: 19367720

Title: Phosphorylation analysis of primary human T lymphocytes using sequential IMAC and titanium oxide enrichment.

PubMed ID: 19367720

DOI: 10.1021/pr800500r

PubMed ID: 18691976

Title: Kinase-selective enrichment enables quantitative phosphoproteomics of the kinome across the cell cycle.

PubMed ID: 18691976

DOI: 10.1016/j.molcel.2008.07.007

PubMed ID: 18669648

Title: A quantitative atlas of mitotic phosphorylation.

PubMed ID: 18669648

DOI: 10.1073/pnas.0805139105

PubMed ID: 18318008

Title: Large-scale phosphoproteome analysis of human liver tissue by enrichment and fractionation of phosphopeptides with strong anion exchange chromatography.

PubMed ID: 18318008

DOI: 10.1002/pmic.200700884

PubMed ID: 19413330

Title: Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach.

PubMed ID: 19413330

DOI: 10.1021/ac9004309

PubMed ID: 19690332

Title: Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions.

PubMed ID: 19690332

DOI: 10.1126/scisignal.2000007

PubMed ID: 20068231

Title: Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.

PubMed ID: 20068231

DOI: 10.1126/scisignal.2000475

PubMed ID: 21269460

Title: Initial characterization of the human central proteome.

PubMed ID: 21269460

DOI: 10.1186/1752-0509-5-17

PubMed ID: 21406692

Title: System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation.

PubMed ID: 21406692

DOI: 10.1126/scisignal.2001570

PubMed ID: 22814378

Title: N-terminal acetylome analyses and functional insights of the N-terminal acetyltransferase NatB.

PubMed ID: 22814378

DOI: 10.1073/pnas.1210303109

PubMed ID: 23186163

Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.

PubMed ID: 23186163

DOI: 10.1021/pr300630k

PubMed ID: 24275569

Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.

PubMed ID: 24275569

DOI: 10.1016/j.jprot.2013.11.014

PubMed ID: 25218447

Title: Uncovering global SUMOylation signaling networks in a site-specific manner.

PubMed ID: 25218447

DOI: 10.1038/nsmb.2890

PubMed ID: 25114211

Title: Mapping of SUMO sites and analysis of SUMOylation changes induced by external stimuli.

PubMed ID: 25114211

DOI: 10.1073/pnas.1413825111

PubMed ID: 25678563

Title: Peptidylprolyl isomerase A governs TARDBP function and assembly in heterogeneous nuclear ribonucleoprotein complexes.

PubMed ID: 25678563

DOI: 10.1093/brain/awv005

PubMed ID: 25772364

Title: SUMO-2 orchestrates chromatin modifiers in response to DNA damage.

PubMed ID: 25772364

DOI: 10.1016/j.celrep.2015.02.033

PubMed ID: 25755297

Title: System-wide analysis of SUMOylation dynamics in response to replication stress reveals novel small ubiquitin-like modified target proteins and acceptor lysines relevant for genome stability.

PubMed ID: 25755297

DOI: 10.1074/mcp.o114.044792

PubMed ID: 25719671

Title: N(6)-methyladenosine-dependent RNA structural switches regulate RNA-protein interactions.

PubMed ID: 25719671

DOI: 10.1038/nature14234

PubMed ID: 25944712

Title: N-terminome analysis of the human mitochondrial proteome.

PubMed ID: 25944712

DOI: 10.1002/pmic.201400617

PubMed ID: 28112733

Title: Site-specific mapping of the human SUMO proteome reveals co-modification with phosphorylation.

PubMed ID: 28112733

DOI: 10.1038/nsmb.3366

PubMed ID: 37599448

Title: Nucleo-cytoplasmic shuttling of 14-3-3 epsilon carrying hnRNP C promotes autophagy.

PubMed ID: 37599448

DOI: 10.1080/15384047.2023.2246203

PubMed ID: 1385725

Title: 1H, 13C, and 15N NMR assignments and global folding pattern of the RNA-binding domain of the human hnRNP C proteins.

PubMed ID: 1385725

DOI: 10.1021/bi00142a013

PubMed ID: 1380452

Title: Interaction of the RNA-binding domain of the hnRNP C proteins with RNA.

PubMed ID: 1380452

DOI: 10.1002/j.1460-2075.1992.tb05407.x

PubMed ID: 11162094

Title: An antiparallel four-helix bundle orients the high-affinity RNA binding sites in hnRNP C: a mechanism for RNA chaperonin activity.

PubMed ID: 11162094

DOI: 10.1006/jmbi.2000.4331

PubMed ID: 15936032

Title: Solution structure of the symmetric coiled coil tetramer formed by the oligomerization domain of hnRNP C: implications for biological function.

PubMed ID: 15936032

DOI: 10.1016/j.jmb.2005.05.002

Sequence Information:

  • Length: 306
  • Mass: 33670
  • Checksum: 17BBC78690C69C5C
  • Sequence:
  • MASNVTNKTD PRSMNSRVFI GNLNTLVVKK SDVEAIFSKY GKIVGCSVHK GFAFVQYVNE 
    RNARAAVAGE DGRMIAGQVL DINLAAEPKV NRGKAGVKRS AAEMYGSVTE HPSPSPLLSS 
    SFDLDYDFQR DYYDRMYSYP ARVPPPPPIA RAVVPSKRQR VSGNTSRRGK SGFNSKSGQR 
    GSSKSGKLKG DDLQAIKKEL TQIKQKVDSL LENLEKIEKE QSKQAVEMKN DKSEEEQSSS 
    SVKKDETNVK MESEGGADDS AEEGDLLDDD DNEDRGDDQL ELIKDDEKEA EEGEDDRDSA 
    NGEDDS

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. For the full schema, download it here.