Details for: CL0008019

Cell ID: CL0008019

Cell Name: mesenchymal cell

Marker Score Threshold: 1700
(Derived using integrated single-cell and genomic data)

Description: A non-polarised cell precursor cell that is part of some mesenchyme, is associated with the cell matrix but is not connected to other cells and is capable of migration.

Synonyms: mesenchyme cell

Genes (max top 100)

(Marker Score score is uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)

  • Gene Symbol: APOA1 (ENSG00000118137)
    Fold Change: 5.53
    Ensembl ID: ENSG00000118137
  • Gene Symbol: APOA4 (ENSG00000110244)
    Fold Change: 4.82
    Ensembl ID: ENSG00000110244
  • Gene Symbol: ADGRB3 (ENSG00000135298)
    Fold Change: 3.21
    Ensembl ID: ENSG00000135298
  • Gene Symbol: ACTB (ENSG00000075624)
    Fold Change: 2.95
    Ensembl ID: ENSG00000075624
  • Gene Symbol: BTF3 (ENSG00000145741)
    Fold Change: 2.78
    Ensembl ID: ENSG00000145741
  • Gene Symbol: ATP5MC2 (ENSG00000135390)
    Fold Change: 2.72
    Ensembl ID: ENSG00000135390
  • Gene Symbol: ATP5F1E (ENSG00000124172)
    Fold Change: 2.66
    Ensembl ID: ENSG00000124172
  • Gene Symbol: ALDOA (ENSG00000149925)
    Fold Change: 2.58
    Ensembl ID: ENSG00000149925
  • Gene Symbol: ATP5F1B (ENSG00000110955)
    Fold Change: 2.57
    Ensembl ID: ENSG00000110955
  • Gene Symbol: BSG (ENSG00000172270)
    Fold Change: 2.55
    Ensembl ID: ENSG00000172270
  • Gene Symbol: APOC3 (ENSG00000110245)
    Fold Change: 2.52
    Ensembl ID: ENSG00000110245
  • Gene Symbol: ATP5MC3 (ENSG00000154518)
    Fold Change: 2.5
    Ensembl ID: ENSG00000154518
  • Gene Symbol: ATP5F1A (ENSG00000152234)
    Fold Change: 2.5
    Ensembl ID: ENSG00000152234
  • Gene Symbol: ZFP36L1 (ENSG00000185650)
    Fold Change: 2.49
    Ensembl ID: ENSG00000185650
  • Gene Symbol: ATP5ME (ENSG00000169020)
    Fold Change: 2.47
    Ensembl ID: ENSG00000169020
  • Gene Symbol: ATP5PF (ENSG00000154723)
    Fold Change: 2.44
    Ensembl ID: ENSG00000154723
  • Gene Symbol: RHOA (ENSG00000067560)
    Fold Change: 2.4
    Ensembl ID: ENSG00000067560
  • Gene Symbol: APEX1 (ENSG00000100823)
    Fold Change: 2.32
    Ensembl ID: ENSG00000100823
  • Gene Symbol: ATP5PO (ENSG00000241837)
    Fold Change: 2.27
    Ensembl ID: ENSG00000241837
  • Gene Symbol: APP (ENSG00000142192)
    Fold Change: 2.27
    Ensembl ID: ENSG00000142192
  • Gene Symbol: ARF1 (ENSG00000143761)
    Fold Change: 2.25
    Ensembl ID: ENSG00000143761
  • Gene Symbol: BST2 (ENSG00000130303)
    Fold Change: 2.22
    Ensembl ID: ENSG00000130303
  • Gene Symbol: ATP5F1C (ENSG00000165629)
    Fold Change: 2.2
    Ensembl ID: ENSG00000165629
  • Gene Symbol: ATP5PB (ENSG00000116459)
    Fold Change: 2.19
    Ensembl ID: ENSG00000116459
  • Gene Symbol: ARF4 (ENSG00000168374)
    Fold Change: 2.09
    Ensembl ID: ENSG00000168374
  • Gene Symbol: ACP1 (ENSG00000143727)
    Fold Change: 2.06
    Ensembl ID: ENSG00000143727
  • Gene Symbol: ADH5 (ENSG00000197894)
    Fold Change: 2.02
    Ensembl ID: ENSG00000197894
  • Gene Symbol: BNIP3L (ENSG00000104765)
    Fold Change: 1.99
    Ensembl ID: ENSG00000104765
  • Gene Symbol: APRT (ENSG00000198931)
    Fold Change: 1.96
    Ensembl ID: ENSG00000198931
  • Gene Symbol: ATF4 (ENSG00000128272)
    Fold Change: 1.92
    Ensembl ID: ENSG00000128272
  • Gene Symbol: ARF5 (ENSG00000004059)
    Fold Change: 1.89
    Ensembl ID: ENSG00000004059
  • Gene Symbol: PARP1 (ENSG00000143799)
    Fold Change: 1.89
    Ensembl ID: ENSG00000143799
  • Gene Symbol: ATP6V0B (ENSG00000117410)
    Fold Change: 1.88
    Ensembl ID: ENSG00000117410
  • Gene Symbol: B2M (ENSG00000166710)
    Fold Change: 1.84
    Ensembl ID: ENSG00000166710
  • Gene Symbol: ATOX1 (ENSG00000177556)
    Fold Change: 1.81
    Ensembl ID: ENSG00000177556
  • Gene Symbol: ARL3 (ENSG00000138175)
    Fold Change: 1.81
    Ensembl ID: ENSG00000138175
  • Gene Symbol: APLP2 (ENSG00000084234)
    Fold Change: 1.77
    Ensembl ID: ENSG00000084234
  • Gene Symbol: ACTG1 (ENSG00000184009)
    Fold Change: 1.77
    Ensembl ID: ENSG00000184009
  • Gene Symbol: ANXA5 (ENSG00000164111)
    Fold Change: 1.69
    Ensembl ID: ENSG00000164111
  • Gene Symbol: ATP5MC1 (ENSG00000159199)
    Fold Change: 1.69
    Ensembl ID: ENSG00000159199
  • Gene Symbol: BTG1 (ENSG00000133639)
    Fold Change: 1.68
    Ensembl ID: ENSG00000133639
  • Gene Symbol: C1QBP (ENSG00000108561)
    Fold Change: 1.68
    Ensembl ID: ENSG00000108561
  • Gene Symbol: AKR1B1 (ENSG00000085662)
    Fold Change: 1.66
    Ensembl ID: ENSG00000085662
  • Gene Symbol: AK2 (ENSG00000004455)
    Fold Change: 1.64
    Ensembl ID: ENSG00000004455
  • Gene Symbol: ATP2B1 (ENSG00000070961)
    Fold Change: 1.61
    Ensembl ID: ENSG00000070961
  • Gene Symbol: ARHGDIA (ENSG00000141522)
    Fold Change: 1.61
    Ensembl ID: ENSG00000141522
  • Gene Symbol: SLC25A6 (ENSG00000169100)
    Fold Change: 1.6
    Ensembl ID: ENSG00000169100
  • Gene Symbol: ADRB3 (ENSG00000188778)
    Fold Change: 1.59
    Ensembl ID: ENSG00000188778
  • Gene Symbol: AMD1 (ENSG00000123505)
    Fold Change: 1.58
    Ensembl ID: ENSG00000123505
  • Gene Symbol: ACTL6A (ENSG00000136518)
    Fold Change: 1.57
    Ensembl ID: ENSG00000136518
  • Gene Symbol: BAX (ENSG00000087088)
    Fold Change: 1.55
    Ensembl ID: ENSG00000087088
  • Gene Symbol: ATP1A1 (ENSG00000163399)
    Fold Change: 1.53
    Ensembl ID: ENSG00000163399
  • Gene Symbol: BNIP3 (ENSG00000176171)
    Fold Change: 1.52
    Ensembl ID: ENSG00000176171
  • Gene Symbol: ARL2 (ENSG00000213465)
    Fold Change: 1.51
    Ensembl ID: ENSG00000213465
  • Gene Symbol: AHCY (ENSG00000101444)
    Fold Change: 1.49
    Ensembl ID: ENSG00000101444
  • Gene Symbol: AAMP (ENSG00000127837)
    Fold Change: 1.44
    Ensembl ID: ENSG00000127837
  • Gene Symbol: VPS51 (ENSG00000149823)
    Fold Change: 1.43
    Ensembl ID: ENSG00000149823
  • Gene Symbol: AUP1 (ENSG00000115307)
    Fold Change: 1.41
    Ensembl ID: ENSG00000115307
  • Gene Symbol: ANXA6 (ENSG00000197043)
    Fold Change: 1.4
    Ensembl ID: ENSG00000197043
  • Gene Symbol: ACTN4 (ENSG00000130402)
    Fold Change: 1.4
    Ensembl ID: ENSG00000130402
  • Gene Symbol: ATP5F1D (ENSG00000099624)
    Fold Change: 1.39
    Ensembl ID: ENSG00000099624
  • Gene Symbol: BCL7A (ENSG00000110987)
    Fold Change: 1.39
    Ensembl ID: ENSG00000110987
  • Gene Symbol: GET3 (ENSG00000198356)
    Fold Change: 1.38
    Ensembl ID: ENSG00000198356
  • Gene Symbol: BAD (ENSG00000002330)
    Fold Change: 1.37
    Ensembl ID: ENSG00000002330
  • Gene Symbol: RHOC (ENSG00000155366)
    Fold Change: 1.36
    Ensembl ID: ENSG00000155366
  • Gene Symbol: ALDH7A1 (ENSG00000164904)
    Fold Change: 1.33
    Ensembl ID: ENSG00000164904
  • Gene Symbol: ATP1B3 (ENSG00000069849)
    Fold Change: 1.33
    Ensembl ID: ENSG00000069849
  • Gene Symbol: ATIC (ENSG00000138363)
    Fold Change: 1.33
    Ensembl ID: ENSG00000138363
  • Gene Symbol: ACADVL (ENSG00000072778)
    Fold Change: 1.32
    Ensembl ID: ENSG00000072778
  • Gene Symbol: PLIN2 (ENSG00000147872)
    Fold Change: 1.3
    Ensembl ID: ENSG00000147872
  • Gene Symbol: RHOB (ENSG00000143878)
    Fold Change: 1.29
    Ensembl ID: ENSG00000143878
  • Gene Symbol: ADSL (ENSG00000239900)
    Fold Change: 1.28
    Ensembl ID: ENSG00000239900
  • Gene Symbol: ACADM (ENSG00000117054)
    Fold Change: 1.28
    Ensembl ID: ENSG00000117054
  • Gene Symbol: ADD3 (ENSG00000148700)
    Fold Change: 1.24
    Ensembl ID: ENSG00000148700
  • Gene Symbol: ARL1 (ENSG00000120805)
    Fold Change: 1.23
    Ensembl ID: ENSG00000120805
  • Gene Symbol: SLC25A5 (ENSG00000005022)
    Fold Change: 1.2
    Ensembl ID: ENSG00000005022
  • Gene Symbol: RERE (ENSG00000142599)
    Fold Change: 1.2
    Ensembl ID: ENSG00000142599
  • Gene Symbol: ADD1 (ENSG00000087274)
    Fold Change: 1.19
    Ensembl ID: ENSG00000087274
  • Gene Symbol: BLMH (ENSG00000108578)
    Fold Change: 1.16
    Ensembl ID: ENSG00000108578
  • Gene Symbol: ABCF1 (ENSG00000204574)
    Fold Change: 1.14
    Ensembl ID: ENSG00000204574
  • Gene Symbol: BIN1 (ENSG00000136717)
    Fold Change: 1.14
    Ensembl ID: ENSG00000136717
  • Gene Symbol: ARL4D (ENSG00000175906)
    Fold Change: 1.13
    Ensembl ID: ENSG00000175906
  • Gene Symbol: BAG1 (ENSG00000107262)
    Fold Change: 1.13
    Ensembl ID: ENSG00000107262
  • Gene Symbol: ACAT2 (ENSG00000120437)
    Fold Change: 1.13
    Ensembl ID: ENSG00000120437
  • Gene Symbol: ASAH1 (ENSG00000104763)
    Fold Change: 1.13
    Ensembl ID: ENSG00000104763
  • Gene Symbol: ATP6V1E1 (ENSG00000131100)
    Fold Change: 1.13
    Ensembl ID: ENSG00000131100
  • Gene Symbol: ALDH2 (ENSG00000111275)
    Fold Change: 1.11
    Ensembl ID: ENSG00000111275
  • Gene Symbol: SLC25A4 (ENSG00000151729)
    Fold Change: 1.11
    Ensembl ID: ENSG00000151729
  • Gene Symbol: ADSS2 (ENSG00000035687)
    Fold Change: 1.11
    Ensembl ID: ENSG00000035687
  • Gene Symbol: ARF3 (ENSG00000134287)
    Fold Change: 1.1
    Ensembl ID: ENSG00000134287
  • Gene Symbol: TLE5 (ENSG00000104964)
    Fold Change: 1.1
    Ensembl ID: ENSG00000104964
  • Gene Symbol: ALDH9A1 (ENSG00000143149)
    Fold Change: 1.1
    Ensembl ID: ENSG00000143149
  • Gene Symbol: ANXA7 (ENSG00000138279)
    Fold Change: 1.1
    Ensembl ID: ENSG00000138279
  • Gene Symbol: ACO2 (ENSG00000100412)
    Fold Change: 1.06
    Ensembl ID: ENSG00000100412
  • Gene Symbol: AP2B1 (ENSG00000006125)
    Fold Change: 1.05
    Ensembl ID: ENSG00000006125
  • Gene Symbol: ALDH3A2 (ENSG00000072210)
    Fold Change: 1.03
    Ensembl ID: ENSG00000072210
  • Gene Symbol: ATRX (ENSG00000085224)
    Fold Change: 1.02
    Ensembl ID: ENSG00000085224
  • Gene Symbol: BIRC5 (ENSG00000089685)
    Fold Change: 1.01
    Ensembl ID: ENSG00000089685
  • Gene Symbol: ARF6 (ENSG00000165527)
    Fold Change: 1
    Ensembl ID: ENSG00000165527
  • Gene Symbol: ADAR (ENSG00000160710)
    Fold Change: N/A
    Ensembl ID: ENSG00000160710
Hovered Details

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Hovered Details

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**Key Characteristics** Mesenchymal cells are characterized by their ability to migrate and differentiate into various cell types, including osteoblasts, chondrocytes, and adipocytes. They are also capable of producing a range of extracellular matrix proteins, including collagen, fibronectin, and laminin. Mesenchymal cells have a unique ability to regulate lipid metabolism and cholesterol homeostasis, which is mediated by their expression of apolipoprotein A-I (APOA1) and apolipoprotein A-IV (APOA4) genes. **Clinical Significance** Mesenchymal cells have been implicated in various diseases, including cardiovascular disease, diabetes, and cancer. They have also been used as a source of stem cells for regenerative medicine and tissue engineering. In addition, mesenchymal cells have been shown to have immunomodulatory properties, which make them potential therapeutic agents for treating autoimmune diseases. **Pathways and Ontologies** Mesenchymal cells are involved in a range of biological pathways, including: * Acylglycerol homeostasis * Amyloid fiber formation * Antioxidant activity * Assembly of active lipoprotein lipase and lipase complexes * Blood microparticle formation * Cell surface receptor signaling pathway * Cholesterol efflux * Cholesterol homeostasis * Cholesterol metabolic process * Cholesterol transfer activity * Cytoskeleton organization * Endoplasmic reticulum lumen formation * Extracellular exosome formation * High-density lipoprotein particle formation * High-density lipoprotein particle remodeling * Lipid binding * Lipid catabolic process * Lipid homeostasis * Lipid transport * Lipoprotein metabolic process * Plasma lipoprotein assembly and clearance * Phosphatidylcholine binding and metabolic process * Phospholipid binding and efflux * Reverse cholesterol transport * Sensory perception * Synapse formation and maturation * Visual phototransduction **Gene Symbol and Ensembl ID** The gene symbol for mesenchymal cells is APOA1 (apolipoprotein A-I) and APOA4 (apolipoprotein A-IV). The Ensembl ID for these genes is ENSG00000118137 and ENSG00000110244, respectively. **Conclusion** Mesenchymal cells are a type of non-polarized cell precursor that plays a crucial role in various biological processes, including development, tissue repair, and immune responses. They are also involved in the regulation of lipid metabolism and cholesterol homeostasis. Understanding the key characteristics, clinical significance, and pathways associated with mesenchymal cells is essential for advancing our knowledge of these cells and their role in human disease.