Details for: RBM39
Associated with
Cells (max top 100)
(Marker Scores and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: fibroblast of mammary gland (CL0002555)
Fold Change: 4.42
Marker Score: 150,244 - Cell Name: alpha-beta T cell (CL0000789)
Fold Change: 4.13
Marker Score: 3,128 - Cell Name: skeletal muscle satellite stem cell (CL0008011)
Fold Change: 3.83
Marker Score: 4,087 - Cell Name: microfold cell of epithelium of small intestine (CL1000353)
Fold Change: 3.73
Marker Score: 890 - Cell Name: CD8-positive, alpha-beta memory T cell, CD45RO-positive (CL0001203)
Fold Change: 3.71
Marker Score: 10,399 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: 3.7
Marker Score: 7,800 - Cell Name: radial glial cell (CL0000681)
Fold Change: 3.66
Marker Score: 1,348 - Cell Name: IgG-negative class switched memory B cell (CL0002117)
Fold Change: 3.62
Marker Score: 3,570 - Cell Name: basal cell of prostate epithelium (CL0002341)
Fold Change: 3.59
Marker Score: 8,764 - Cell Name: NKp46-positive innate lymphoid cell, human (CL0001076)
Fold Change: 3.57
Marker Score: 10,426 - Cell Name: CD38-negative naive B cell (CL0002102)
Fold Change: 3.55
Marker Score: 7,444 - Cell Name: mature gamma-delta T cell (CL0000800)
Fold Change: 3.55
Marker Score: 11,188 - Cell Name: decidual natural killer cell, human (CL0002343)
Fold Change: 3.52
Marker Score: 9,736 - Cell Name: mature alpha-beta T cell (CL0000791)
Fold Change: 3.41
Marker Score: 180,171 - Cell Name: melanocyte (CL0000148)
Fold Change: 3.38
Marker Score: 1,371 - Cell Name: mesodermal cell (CL0000222)
Fold Change: 3.37
Marker Score: 44,491 - Cell Name: epicardial adipocyte (CL1000309)
Fold Change: 3.31
Marker Score: 1,609 - Cell Name: mature T cell (CL0002419)
Fold Change: 3.29
Marker Score: 32,620 - Cell Name: erythroblast (CL0000765)
Fold Change: 3.28
Marker Score: 2,048 - Cell Name: effector CD8-positive, alpha-beta T cell (CL0001050)
Fold Change: 3.28
Marker Score: 2,757 - Cell Name: fibroblast of connective tissue of nonglandular part of prostate (CL1000304)
Fold Change: 3.27
Marker Score: 2,786 - Cell Name: Bergmann glial cell (CL0000644)
Fold Change: 3.26
Marker Score: 1,327 - Cell Name: epithelial cell of uterus (CL0002149)
Fold Change: 3.21
Marker Score: 735 - Cell Name: ependymal cell (CL0000065)
Fold Change: 3.2
Marker Score: 1,117 - Cell Name: stromal cell (CL0000499)
Fold Change: 3.15
Marker Score: 3,685 - Cell Name: naive B cell (CL0000788)
Fold Change: 3.14
Marker Score: 2,808 - Cell Name: CD14-positive, CD16-negative classical monocyte (CL0002057)
Fold Change: 3.13
Marker Score: 174,923 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: 3.13
Marker Score: 6,860 - Cell Name: CD8-positive, alpha-beta cytokine secreting effector T cell (CL0000908)
Fold Change: 3.12
Marker Score: 1,346 - Cell Name: CD16-negative, CD56-bright natural killer cell, human (CL0000938)
Fold Change: 3.12
Marker Score: 2,555 - Cell Name: myoepithelial cell of mammary gland (CL0002324)
Fold Change: 3.11
Marker Score: 15,290 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: 3.11
Marker Score: 55,185 - Cell Name: blood cell (CL0000081)
Fold Change: 3.11
Marker Score: 36,132 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: 3.11
Marker Score: 13,008 - Cell Name: double negative thymocyte (CL0002489)
Fold Change: 3.11
Marker Score: 4,285 - Cell Name: podocyte (CL0000653)
Fold Change: 3.09
Marker Score: 1,141 - Cell Name: type I NK T cell (CL0000921)
Fold Change: 3.07
Marker Score: 2,412 - Cell Name: Schwann cell (CL0002573)
Fold Change: 3.07
Marker Score: 1,065 - Cell Name: CD4-positive helper T cell (CL0000492)
Fold Change: 3.07
Marker Score: 3,337 - Cell Name: regular ventricular cardiac myocyte (CL0002131)
Fold Change: 3.06
Marker Score: 68,488 - Cell Name: activated CD8-positive, alpha-beta T cell (CL0000906)
Fold Change: 3.06
Marker Score: 2,220 - Cell Name: enteroendocrine cell of small intestine (CL0009006)
Fold Change: 3.04
Marker Score: 867 - Cell Name: malignant cell (CL0001064)
Fold Change: 3.03
Marker Score: 40,770 - Cell Name: endothelial cell of hepatic sinusoid (CL1000398)
Fold Change: 3.01
Marker Score: 660 - Cell Name: type I enteroendocrine cell (CL0002277)
Fold Change: 3.01
Marker Score: 748 - Cell Name: pro-B cell (CL0000826)
Fold Change: 3
Marker Score: 2,896 - Cell Name: naive T cell (CL0000898)
Fold Change: 3
Marker Score: 1,931 - Cell Name: progenitor cell of endocrine pancreas (CL0002351)
Fold Change: 2.99
Marker Score: 650 - Cell Name: central memory CD8-positive, alpha-beta T cell (CL0000907)
Fold Change: 2.99
Marker Score: 7,289 - Cell Name: papillary tips cell (CL1000597)
Fold Change: 2.98
Marker Score: 602 - Cell Name: nasal mucosa goblet cell (CL0002480)
Fold Change: 2.98
Marker Score: 1,992 - Cell Name: early pro-B cell (CL0002046)
Fold Change: 2.98
Marker Score: 30,157 - Cell Name: luminal cell of prostate epithelium (CL0002340)
Fold Change: 2.97
Marker Score: 1,732 - Cell Name: natural T-regulatory cell (CL0000903)
Fold Change: 2.97
Marker Score: 1,526 - Cell Name: epithelial cell of urethra (CL1000296)
Fold Change: 2.97
Marker Score: 2,339 - Cell Name: retinal pigment epithelial cell (CL0002586)
Fold Change: 2.96
Marker Score: 872 - Cell Name: activated CD4-positive, alpha-beta T cell, human (CL0001043)
Fold Change: 2.96
Marker Score: 1,346 - Cell Name: lung neuroendocrine cell (CL1000223)
Fold Change: 2.96
Marker Score: 834 - Cell Name: endothelial tip cell (CL0000704)
Fold Change: 2.96
Marker Score: 688 - Cell Name: columnar/cuboidal epithelial cell (CL0000075)
Fold Change: 2.95
Marker Score: 781 - Cell Name: basal cell (CL0000646)
Fold Change: 2.94
Marker Score: 3,797 - Cell Name: memory B cell (CL0000787)
Fold Change: 2.94
Marker Score: 2,225 - Cell Name: Schwann cell precursor (CL0002375)
Fold Change: 2.94
Marker Score: 730 - Cell Name: mature NK T cell (CL0000814)
Fold Change: 2.93
Marker Score: 1,359 - Cell Name: granulocyte (CL0000094)
Fold Change: 2.92
Marker Score: 1,310 - Cell Name: DN3 thymocyte (CL0000807)
Fold Change: 2.91
Marker Score: 1,455 - Cell Name: cardiac neuron (CL0010022)
Fold Change: 2.91
Marker Score: 3,624 - Cell Name: tendon cell (CL0000388)
Fold Change: 2.91
Marker Score: 715 - Cell Name: kidney loop of Henle thin descending limb epithelial cell (CL1001111)
Fold Change: 2.91
Marker Score: 3,135 - Cell Name: effector CD4-positive, alpha-beta T cell (CL0001044)
Fold Change: 2.9
Marker Score: 2,717 - Cell Name: endothelial cell (CL0000115)
Fold Change: 2.9
Marker Score: 2,601 - Cell Name: anterior lens cell (CL0002223)
Fold Change: 2.9
Marker Score: 3,899 - Cell Name: IgG memory B cell (CL0000979)
Fold Change: 2.88
Marker Score: 1,735 - Cell Name: class switched memory B cell (CL0000972)
Fold Change: 2.87
Marker Score: 2,699 - Cell Name: parietal cell (CL0000162)
Fold Change: 2.87
Marker Score: 800 - Cell Name: myofibroblast cell (CL0000186)
Fold Change: 2.87
Marker Score: 3,539 - Cell Name: hepatic stellate cell (CL0000632)
Fold Change: 2.86
Marker Score: 1,079 - Cell Name: effector memory CD8-positive, alpha-beta T cell, terminally differentiated (CL0001062)
Fold Change: 2.86
Marker Score: 4,214 - Cell Name: transitional stage B cell (CL0000818)
Fold Change: 2.86
Marker Score: 1,011 - Cell Name: CD56-positive, CD161-positive immature natural killer cell, human (CL0002338)
Fold Change: 2.85
Marker Score: 938 - Cell Name: memory T cell (CL0000813)
Fold Change: 2.85
Marker Score: 1,225 - Cell Name: endothelial cell of vascular tree (CL0002139)
Fold Change: 2.85
Marker Score: 4,140 - Cell Name: fibroblast of connective tissue of glandular part of prostate (CL1000305)
Fold Change: 2.85
Marker Score: 1,186 - Cell Name: muscle precursor cell (CL0000680)
Fold Change: 2.84
Marker Score: 737 - Cell Name: capillary endothelial cell (CL0002144)
Fold Change: 2.84
Marker Score: 3,059 - Cell Name: T-helper 22 cell (CL0001042)
Fold Change: 2.84
Marker Score: 12,193 - Cell Name: immature B cell (CL0000816)
Fold Change: 2.84
Marker Score: 1,883 - Cell Name: late pro-B cell (CL0002048)
Fold Change: 2.84
Marker Score: 3,354 - Cell Name: epidermal cell (CL0000362)
Fold Change: 2.84
Marker Score: 798 - Cell Name: common myeloid progenitor (CL0000049)
Fold Change: 2.84
Marker Score: 752 - Cell Name: CD8-positive, alpha-beta cytotoxic T cell (CL0000794)
Fold Change: 2.83
Marker Score: 2,497 - Cell Name: gamma-delta T cell (CL0000798)
Fold Change: 2.83
Marker Score: 1,901 - Cell Name: choroid plexus epithelial cell (CL0000706)
Fold Change: 2.83
Marker Score: 2,596 - Cell Name: microglial cell (CL0000129)
Fold Change: 2.83
Marker Score: 5,146 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: 2.82
Marker Score: 2,971 - Cell Name: supporting cell (CL0000630)
Fold Change: 2.82
Marker Score: 5,300 - Cell Name: visceromotor neuron (CL0005025)
Fold Change: 2.82
Marker Score: 822 - Cell Name: astrocyte (CL0000127)
Fold Change: 2.81
Marker Score: 2,439 - Cell Name: kidney interstitial fibroblast (CL1000692)
Fold Change: 2.81
Marker Score: 5,409 - Cell Name: neutrophil progenitor cell (CL0000834)
Fold Change: 2.81
Marker Score: 720
Fold Change: Represents the ratio of the current Marker Score to the Marker Score Threshold, indicating how much the gene expression has changed compared to a baseline.
Marker Score: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Marker Score to the Marker Score Threshold, indicating how much the gene expression has changed compared to a baseline.
Marker Score: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Marker Score to the Marker Score Threshold, indicating how much the gene expression has changed compared to a baseline.
Marker Score: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 795432031
Symbol: RBM39_HUMAN
Name: RNA-binding motif protein 39
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 8227358
Title: Novel nuclear autoantigen with splicing factor motifs identified with antibody from hepatocellular carcinoma.
PubMed ID: 8227358
DOI: 10.1172/jci116848
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 11780052
Title: The DNA sequence and comparative analysis of human chromosome 20.
PubMed ID: 11780052
DOI: 10.1038/414865a
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 15694343
Title: Steroid hormone receptor coactivation and alternative RNA splicing by U2AF65-related proteins CAPERalpha and CAPERbeta.
PubMed ID: 15694343
PubMed ID: 15798186
Title: A novel SR-related protein is required for the second step of pre-mRNA splicing.
PubMed ID: 15798186
PubMed ID: 17081983
Title: Global, in vivo, and site-specific phosphorylation dynamics in signaling networks.
PubMed ID: 17081983
PubMed ID: 18691976
Title: Kinase-selective enrichment enables quantitative phosphoproteomics of the kinome across the cell cycle.
PubMed ID: 18691976
PubMed ID: 18669648
Title: A quantitative atlas of mitotic phosphorylation.
PubMed ID: 18669648
PubMed ID: 19690332
Title: Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions.
PubMed ID: 19690332
PubMed ID: 20068231
Title: Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.
PubMed ID: 20068231
PubMed ID: 21269460
Title: Initial characterization of the human central proteome.
PubMed ID: 21269460
PubMed ID: 21406692
Title: System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation.
PubMed ID: 21406692
PubMed ID: 22223895
Title: Comparative large-scale characterisation of plant vs. mammal proteins reveals similar and idiosyncratic N-alpha acetylation features.
PubMed ID: 22223895
PubMed ID: 22814378
Title: N-terminal acetylome analyses and functional insights of the N-terminal acetyltransferase NatB.
PubMed ID: 22814378
PubMed ID: 23186163
Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.
PubMed ID: 23186163
DOI: 10.1021/pr300630k
PubMed ID: 24275569
Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.
PubMed ID: 24275569
PubMed ID: 28112733
Title: Site-specific mapping of the human SUMO proteome reveals co-modification with phosphorylation.
PubMed ID: 28112733
DOI: 10.1038/nsmb.3366
PubMed ID: 28437394
Title: Selective degradation of splicing factor CAPERalpha by anticancer sulfonamides.
PubMed ID: 28437394
PubMed ID: 28302793
Title: Anticancer sulfonamides target splicing by inducing RBM39 degradation via recruitment to DCAF15.
PubMed ID: 28302793
PubMed ID: 28546157
PubMed ID: 31693891
Title: Aryl sulfonamides degrade RBM39 and RBM23 by recruitment to CRL4-DCAF15.
PubMed ID: 31693891
PubMed ID: 31271494
Title: U2AF65 assemblies drive sequence-specific splice site recognition.
PubMed ID: 31271494
PubMed ID: 24795046
Title: Cancer-relevant splicing factor CAPERalpha engages the essential splicing factor SF3b155 in a specific ternary complex.
PubMed ID: 24795046
PubMed ID: 31686031
Title: Structural complementarity facilitates E7820-mediated degradation of RBM39 by DCAF15.
PubMed ID: 31686031
PubMed ID: 31819272
Title: Structural basis of indisulam-mediated RBM39 recruitment to DCAF15 E3 ligase complex.
PubMed ID: 31819272
PubMed ID: 31693911
Title: Structural basis and kinetic pathway of RBM39 recruitment to DCAF15 by a sulfonamide molecular glue E7820.
PubMed ID: 31693911
Sequence Information:
- Length: 530
- Mass: 59380
- Checksum: 0CC610356D4AA040
- Sequence:
MADDIDIEAM LEAPYKKDEN KLSSANGHEE RSKKRKKSKS RSRSHERKRS KSKERKRSRD RERKKSKSRE RKRSRSKERR RSRSRSRDRR FRGRYRSPYS GPKFNSAIRG KIGLPHSIKL SRRRSRSKSP FRKDKSPVRE PIDNLTPEER DARTVFCMQL AARIRPRDLE EFFSTVGKVR DVRMISDRNS RRSKGIAYVE FVDVSSVPLA IGLTGQRVLG VPIIVQASQA EKNRAAAMAN NLQKGSAGPM RLYVGSLHFN ITEDMLRGIF EPFGRIESIQ LMMDSETGRS KGYGFITFSD SECAKKALEQ LNGFELAGRP MKVGHVTERT DASSASSFLD SDELERTGID LGTTGRLQLM ARLAEGTGLQ IPPAAQQALQ MSGSLAFGAV AEFSFVIDLQ TRLSQQTEAS ALAAAASVQP LATQCFQLSN MFNPQTEEEV GWDTEIKDDV IEECNKHGGV IHIYVDKNSA QGNVYVKCPS IAAAIAAVNA LHGRWFAGKM ITAAYVPLPT YHNLFPDSMT ATQLLVPSRR
Genular Protein ID: 4245750920
Symbol: B4DRA0_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Sequence Information:
- Length: 502
- Mass: 56411
- Checksum: 140FAB1725010D75
- Sequence:
MADDIDIEAM LEAPYKKDEN KLSSANGHEE RSKKRKKSKS RSRCHERKRS KSKERKRSRD RERKKSKSRE RKRSRSRERR RSRSRSRDRR FRGRYRSPYR RRSRSKSPFR KDKSPVREPI DNLTPEERDA RTVFCMQLAA RIRPRDLEEF FSTVGKVRDV RMISDRNSRR SKGIAYVEFV DVSSVPLAIG LTGQRVLGVP IIVQASQAEK NRAAAMANNL QKGSAGPMRL YVGSLHFNIT EDMLRGIFEP FGRIESIQLM MDSETGRSKG YGFITFSDSE CAKKALEQLN GFELAGRPMK VGHVTERTDA SSASSFLDSD ELERTGIDLG TTGRLQLMAR LAEGTGLQIP PAAQQALQMS GSLAFGAVAD LQTRLSQQTE ASALAAAASV QPLATQCFQL SNMFNPQTEE EVGWDTEIKD DVIEECNKHG GVIHIYVDKN SAQGNVYVKC PSIAAAIAAV NALHGRWFAG KMITAAYVPL PTYHNLFPDS MTATQLLVPS RR
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.