Details for: CL0000499

Cell ID: CL0000499

Cell Name: stromal cell

Marker Score Threshold: 1172
(Derived using integrated single-cell and genomic data)

Description: A connective tissue cell of an organ found in the loose connective tissue. These are most often associated with the uterine mucosa and the ovary as well as the hematopoietic system and elsewhere.

Genes (max top 100)

(Marker Score score is uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)

  • Gene Symbol: SLC25A6 (ENSG00000169100)
    Fold Change: 6.83
    Ensembl ID: ENSG00000169100
  • Gene Symbol: ATP5F1E (ENSG00000124172)
    Fold Change: 5.27
    Ensembl ID: ENSG00000124172
  • Gene Symbol: B2M (ENSG00000166710)
    Fold Change: 5.08
    Ensembl ID: ENSG00000166710
  • Gene Symbol: ACTB (ENSG00000075624)
    Fold Change: 3.9
    Ensembl ID: ENSG00000075624
  • Gene Symbol: BTF3 (ENSG00000145741)
    Fold Change: 3.28
    Ensembl ID: ENSG00000145741
  • Gene Symbol: BTG1 (ENSG00000133639)
    Fold Change: 3.02
    Ensembl ID: ENSG00000133639
  • Gene Symbol: RHOA (ENSG00000067560)
    Fold Change: 2.77
    Ensembl ID: ENSG00000067560
  • Gene Symbol: ZFP36L1 (ENSG00000185650)
    Fold Change: 2.7
    Ensembl ID: ENSG00000185650
  • Gene Symbol: ATP5MC2 (ENSG00000135390)
    Fold Change: 2.63
    Ensembl ID: ENSG00000135390
  • Gene Symbol: ACTG1 (ENSG00000184009)
    Fold Change: 2.6
    Ensembl ID: ENSG00000184009
  • Gene Symbol: ARF1 (ENSG00000143761)
    Fold Change: 2.58
    Ensembl ID: ENSG00000143761
  • Gene Symbol: ZFP36L2 (ENSG00000152518)
    Fold Change: 2.46
    Ensembl ID: ENSG00000152518
  • Gene Symbol: ARF4 (ENSG00000168374)
    Fold Change: 2.37
    Ensembl ID: ENSG00000168374
  • Gene Symbol: ANXA5 (ENSG00000164111)
    Fold Change: 2.3
    Ensembl ID: ENSG00000164111
  • Gene Symbol: ANXA2 (ENSG00000182718)
    Fold Change: 2.28
    Ensembl ID: ENSG00000182718
  • Gene Symbol: BSG (ENSG00000172270)
    Fold Change: 2.22
    Ensembl ID: ENSG00000172270
  • Gene Symbol: ACTN4 (ENSG00000130402)
    Fold Change: 2.21
    Ensembl ID: ENSG00000130402
  • Gene Symbol: ATP5F1B (ENSG00000110955)
    Fold Change: 2.2
    Ensembl ID: ENSG00000110955
  • Gene Symbol: TMEM258 (ENSG00000134825)
    Fold Change: 2.13
    Ensembl ID: ENSG00000134825
  • Gene Symbol: APLP2 (ENSG00000084234)
    Fold Change: 2.1
    Ensembl ID: ENSG00000084234
  • Gene Symbol: ATP5PF (ENSG00000154723)
    Fold Change: 2.1
    Ensembl ID: ENSG00000154723
  • Gene Symbol: SLC25A5 (ENSG00000005022)
    Fold Change: 2.08
    Ensembl ID: ENSG00000005022
  • Gene Symbol: ATP5MC3 (ENSG00000154518)
    Fold Change: 2.06
    Ensembl ID: ENSG00000154518
  • Gene Symbol: ATF4 (ENSG00000128272)
    Fold Change: 2.06
    Ensembl ID: ENSG00000128272
  • Gene Symbol: ATP5ME (ENSG00000169020)
    Fold Change: 2.02
    Ensembl ID: ENSG00000169020
  • Gene Symbol: ATP5F1D (ENSG00000099624)
    Fold Change: 1.98
    Ensembl ID: ENSG00000099624
  • Gene Symbol: BNIP3L (ENSG00000104765)
    Fold Change: 1.97
    Ensembl ID: ENSG00000104765
  • Gene Symbol: RHOC (ENSG00000155366)
    Fold Change: 1.96
    Ensembl ID: ENSG00000155366
  • Gene Symbol: ANXA1 (ENSG00000135046)
    Fold Change: 1.92
    Ensembl ID: ENSG00000135046
  • Gene Symbol: ATP1A1 (ENSG00000163399)
    Fold Change: 1.89
    Ensembl ID: ENSG00000163399
  • Gene Symbol: ADD3 (ENSG00000148700)
    Fold Change: 1.86
    Ensembl ID: ENSG00000148700
  • Gene Symbol: ATP1B3 (ENSG00000069849)
    Fold Change: 1.85
    Ensembl ID: ENSG00000069849
  • Gene Symbol: ARHGDIA (ENSG00000141522)
    Fold Change: 1.84
    Ensembl ID: ENSG00000141522
  • Gene Symbol: ATP5F1A (ENSG00000152234)
    Fold Change: 1.81
    Ensembl ID: ENSG00000152234
  • Gene Symbol: ATP5F1C (ENSG00000165629)
    Fold Change: 1.79
    Ensembl ID: ENSG00000165629
  • Gene Symbol: RHOB (ENSG00000143878)
    Fold Change: 1.76
    Ensembl ID: ENSG00000143878
  • Gene Symbol: APP (ENSG00000142192)
    Fold Change: 1.72
    Ensembl ID: ENSG00000142192
  • Gene Symbol: APRT (ENSG00000198931)
    Fold Change: 1.72
    Ensembl ID: ENSG00000198931
  • Gene Symbol: ATP5PO (ENSG00000241837)
    Fold Change: 1.66
    Ensembl ID: ENSG00000241837
  • Gene Symbol: ATP6V0B (ENSG00000117410)
    Fold Change: 1.63
    Ensembl ID: ENSG00000117410
  • Gene Symbol: APEX1 (ENSG00000100823)
    Fold Change: 1.62
    Ensembl ID: ENSG00000100823
  • Gene Symbol: ACADVL (ENSG00000072778)
    Fold Change: 1.62
    Ensembl ID: ENSG00000072778
  • Gene Symbol: AMD1 (ENSG00000123505)
    Fold Change: 1.61
    Ensembl ID: ENSG00000123505
  • Gene Symbol: TLE5 (ENSG00000104964)
    Fold Change: 1.6
    Ensembl ID: ENSG00000104964
  • Gene Symbol: ATP5MC1 (ENSG00000159199)
    Fold Change: 1.58
    Ensembl ID: ENSG00000159199
  • Gene Symbol: ATP2B1 (ENSG00000070961)
    Fold Change: 1.57
    Ensembl ID: ENSG00000070961
  • Gene Symbol: ADH5 (ENSG00000197894)
    Fold Change: 1.53
    Ensembl ID: ENSG00000197894
  • Gene Symbol: TSPO (ENSG00000100300)
    Fold Change: 1.52
    Ensembl ID: ENSG00000100300
  • Gene Symbol: ATRX (ENSG00000085224)
    Fold Change: 1.52
    Ensembl ID: ENSG00000085224
  • Gene Symbol: ATP5PB (ENSG00000116459)
    Fold Change: 1.5
    Ensembl ID: ENSG00000116459
  • Gene Symbol: PTTG1IP (ENSG00000183255)
    Fold Change: 1.49
    Ensembl ID: ENSG00000183255
  • Gene Symbol: SERPING1 (ENSG00000149131)
    Fold Change: 1.48
    Ensembl ID: ENSG00000149131
  • Gene Symbol: ASAH1 (ENSG00000104763)
    Fold Change: 1.48
    Ensembl ID: ENSG00000104763
  • Gene Symbol: ATOX1 (ENSG00000177556)
    Fold Change: 1.46
    Ensembl ID: ENSG00000177556
  • Gene Symbol: ALDOA (ENSG00000149925)
    Fold Change: 1.44
    Ensembl ID: ENSG00000149925
  • Gene Symbol: AUP1 (ENSG00000115307)
    Fold Change: 1.43
    Ensembl ID: ENSG00000115307
  • Gene Symbol: ALDH1A1 (ENSG00000165092)
    Fold Change: 1.41
    Ensembl ID: ENSG00000165092
  • Gene Symbol: ANXA6 (ENSG00000197043)
    Fold Change: 1.41
    Ensembl ID: ENSG00000197043
  • Gene Symbol: C1QBP (ENSG00000108561)
    Fold Change: 1.41
    Ensembl ID: ENSG00000108561
  • Gene Symbol: ANXA7 (ENSG00000138279)
    Fold Change: 1.4
    Ensembl ID: ENSG00000138279
  • Gene Symbol: CALD1 (ENSG00000122786)
    Fold Change: 1.4
    Ensembl ID: ENSG00000122786
  • Gene Symbol: PLIN2 (ENSG00000147872)
    Fold Change: 1.37
    Ensembl ID: ENSG00000147872
  • Gene Symbol: ATP2A2 (ENSG00000174437)
    Fold Change: 1.35
    Ensembl ID: ENSG00000174437
  • Gene Symbol: ACP1 (ENSG00000143727)
    Fold Change: 1.35
    Ensembl ID: ENSG00000143727
  • Gene Symbol: ADD1 (ENSG00000087274)
    Fold Change: 1.34
    Ensembl ID: ENSG00000087274
  • Gene Symbol: ADAR (ENSG00000160710)
    Fold Change: 1.28
    Ensembl ID: ENSG00000160710
  • Gene Symbol: RND3 (ENSG00000115963)
    Fold Change: 1.26
    Ensembl ID: ENSG00000115963
  • Gene Symbol: ATP6V1E1 (ENSG00000131100)
    Fold Change: 1.25
    Ensembl ID: ENSG00000131100
  • Gene Symbol: AK2 (ENSG00000004455)
    Fold Change: 1.25
    Ensembl ID: ENSG00000004455
  • Gene Symbol: ANXA11 (ENSG00000122359)
    Fold Change: 1.24
    Ensembl ID: ENSG00000122359
  • Gene Symbol: ALDH2 (ENSG00000111275)
    Fold Change: 1.24
    Ensembl ID: ENSG00000111275
  • Gene Symbol: BIRC2 (ENSG00000110330)
    Fold Change: 1.24
    Ensembl ID: ENSG00000110330
  • Gene Symbol: ARL1 (ENSG00000120805)
    Fold Change: 1.21
    Ensembl ID: ENSG00000120805
  • Gene Symbol: AAMP (ENSG00000127837)
    Fold Change: 1.16
    Ensembl ID: ENSG00000127837
  • Gene Symbol: ASPH (ENSG00000198363)
    Fold Change: 1.15
    Ensembl ID: ENSG00000198363
  • Gene Symbol: ANXA4 (ENSG00000196975)
    Fold Change: 1.15
    Ensembl ID: ENSG00000196975
  • Gene Symbol: ACTN1 (ENSG00000072110)
    Fold Change: 1.15
    Ensembl ID: ENSG00000072110
  • Gene Symbol: BST2 (ENSG00000130303)
    Fold Change: 1.15
    Ensembl ID: ENSG00000130303
  • Gene Symbol: ARL2 (ENSG00000213465)
    Fold Change: 1.12
    Ensembl ID: ENSG00000213465
  • Gene Symbol: BNIP2 (ENSG00000140299)
    Fold Change: 1.12
    Ensembl ID: ENSG00000140299
  • Gene Symbol: RERE (ENSG00000142599)
    Fold Change: 1.11
    Ensembl ID: ENSG00000142599
  • Gene Symbol: ARL3 (ENSG00000138175)
    Fold Change: 1.11
    Ensembl ID: ENSG00000138175
  • Gene Symbol: BIN1 (ENSG00000136717)
    Fold Change: 1.09
    Ensembl ID: ENSG00000136717
  • Gene Symbol: ZFHX3 (ENSG00000140836)
    Fold Change: 1.09
    Ensembl ID: ENSG00000140836
  • Gene Symbol: BLVRB (ENSG00000090013)
    Fold Change: 1.08
    Ensembl ID: ENSG00000090013
  • Gene Symbol: AKR1B1 (ENSG00000085662)
    Fold Change: 1.07
    Ensembl ID: ENSG00000085662
  • Gene Symbol: DST (ENSG00000151914)
    Fold Change: 1.07
    Ensembl ID: ENSG00000151914
  • Gene Symbol: BAG1 (ENSG00000107262)
    Fold Change: 1.06
    Ensembl ID: ENSG00000107262
  • Gene Symbol: AP2B1 (ENSG00000006125)
    Fold Change: 1.05
    Ensembl ID: ENSG00000006125
  • Gene Symbol: BAX (ENSG00000087088)
    Fold Change: 1.05
    Ensembl ID: ENSG00000087088
  • Gene Symbol: PARP1 (ENSG00000143799)
    Fold Change: 1.04
    Ensembl ID: ENSG00000143799
  • Gene Symbol: ARF6 (ENSG00000165527)
    Fold Change: 1.03
    Ensembl ID: ENSG00000165527
  • Gene Symbol: BAD (ENSG00000002330)
    Fold Change: 1.02
    Ensembl ID: ENSG00000002330
  • Gene Symbol: ATF3 (ENSG00000162772)
    Fold Change: 1.01
    Ensembl ID: ENSG00000162772
  • Gene Symbol: ABCF1 (ENSG00000204574)
    Fold Change: 1.01
    Ensembl ID: ENSG00000204574
  • Gene Symbol: ADAM10 (ENSG00000137845)
    Fold Change: 1.01
    Ensembl ID: ENSG00000137845
  • Gene Symbol: VPS51 (ENSG00000149823)
    Fold Change: 1.01
    Ensembl ID: ENSG00000149823
  • Gene Symbol: ATM (ENSG00000149311)
    Fold Change: 1
    Ensembl ID: ENSG00000149311
  • Gene Symbol: XIAP (ENSG00000101966)
    Fold Change: 1
    Ensembl ID: ENSG00000101966
  • Gene Symbol: ACADM (ENSG00000117054)
    Fold Change: 1
    Ensembl ID: ENSG00000117054
Hovered Details

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Hovered Details

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**Key Characteristics** 1. **Stromal cell**: A type of connective tissue cell found in various organs, including the uterine mucosa, ovary, hematopoietic system, and others. 2. **SLC25A6 gene**: Involved in ATP:ADP antiporter activity, which is essential for energy production and cellular metabolism. 3. **ATP5F1E gene**: Involved in mitochondrial biogenesis, cristae formation, and ATP synthesis by chemiosmotic coupling. 4. **B2M gene**: Involved in adaptive immune system, antigen presentation, and regulation of immune response. 5. **Apoptotic process**: A program of cell death that is regulated by various cellular pathways, including those involving B2M. 6. **HIV infection**: The cell is involved in HIV infection pathways, including interactions with host cellular proteins and viral factors. 7. **Viral infection pathways**: The cell is involved in viral infection pathways, including those involving HIV, influenza, and other viruses. 8. **Energy production**: The cell produces energy through ATP synthesis by chemiosmotic coupling. 9. **Protein metabolism**: The cell regulates protein metabolism, including protein degradation and import. 10. **Immune response**: The cell is involved in immune response, including antigen presentation, cytokine signaling, and regulation of immune cell activation. **Clinical Significance** 1. **HIV/AIDS**: The cell's involvement in HIV infection pathways highlights the importance of stromal cells in the pathogenesis of HIV/AIDS. 2. **Cancer**: The cell's ability to regulate apoptosis and immune response may be exploited in cancer therapy. 3. **Autoimmune diseases**: The cell's involvement in immune response and antigen presentation may be relevant to autoimmune diseases such as rheumatoid arthritis and lupus. 4. **Regenerative medicine**: The cell's ability to produce energy and regulate protein metabolism makes it a potential candidate for regenerative medicine applications. 5. **Infectious diseases**: The cell's involvement in viral infection pathways highlights the importance of stromal cells in the pathogenesis of infectious diseases. In conclusion, the stromal cell described in this entry is a complex cell type that plays a multifaceted role in various cellular processes, including energy production, protein metabolism, and immune response. Its clinical significance extends to various diseases, including HIV/AIDS, cancer, autoimmune diseases, and infectious diseases. Further research is needed to fully understand the functions and interactions of this cell type and its potential applications in medicine.