Details for: HBG1

Gene ID: 3047

Symbol: HBG1

Ensembl ID: ENSG00000213934

Description: hemoglobin subunit gamma 1

Associated with

Cells (max top 100)

(Marker Score score is uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)

  • Cell Name: hepatoblast (CL0005026)
    Fold Change: 13.2
    Marker Score: 43233
  • Cell Name: lymphocyte (CL0000542)
    Fold Change: 10.8
    Marker Score: 5455
  • Cell Name: endothelial cell of vascular tree (CL0002139)
    Fold Change: 7.47
    Marker Score: 10858
  • Cell Name: erythroblast (CL0000765)
    Fold Change: 6.06
    Marker Score: 3781
  • Cell Name: pulmonary interstitial fibroblast (CL0002241)
    Fold Change: 4.97
    Marker Score: 3978
  • Cell Name: innate lymphoid cell (CL0001065)
    Fold Change: 4.2
    Marker Score: 1509
  • Cell Name: hematopoietic cell (CL0000988)
    Fold Change: 3.94
    Marker Score: 2618.5
  • Cell Name: endocardial cell (CL0002350)
    Fold Change: 2.86
    Marker Score: 1616
  • Cell Name: hepatic stellate cell (CL0000632)
    Fold Change: 2.84
    Marker Score: 1072
  • Cell Name: erythroid progenitor cell (CL0000038)
    Fold Change: 2.61
    Marker Score: 2722
  • Cell Name: cell of skeletal muscle (CL0000188)
    Fold Change: 2.52
    Marker Score: 1914.5
  • Cell Name: cortical cell of adrenal gland (CL0002097)
    Fold Change: 2.4
    Marker Score: 42632
  • Cell Name: mesothelial cell of epicardium (CL0011019)
    Fold Change: 2.24
    Marker Score: 718
  • Cell Name: cardiac muscle cell (CL0000746)
    Fold Change: 2.07
    Marker Score: 27546
  • Cell Name: proerythroblast (CL0000547)
    Fold Change: 2.01
    Marker Score: 1364
  • Cell Name: fetal cardiomyocyte (CL0002495)
    Fold Change: 1.96
    Marker Score: 646
  • Cell Name: myeloid leukocyte (CL0000766)
    Fold Change: 1.93
    Marker Score: 2331
  • Cell Name: epithelial cell of lower respiratory tract (CL0002632)
    Fold Change: 1.65
    Marker Score: 6897
  • Cell Name: myeloid cell (CL0000763)
    Fold Change: 1.65
    Marker Score: 2645
  • Cell Name: goblet cell (CL0000160)
    Fold Change: 1.56
    Marker Score: 10347
  • Cell Name: fibroblast of lung (CL0002553)
    Fold Change: 1.55
    Marker Score: 4060.5
  • Cell Name: hepatocyte (CL0000182)
    Fold Change: 1.54
    Marker Score: 1053
  • Cell Name: sympathetic neuron (CL0011103)
    Fold Change: 1.54
    Marker Score: 509
  • Cell Name: chromaffin cell (CL0000166)
    Fold Change: 1.5
    Marker Score: 2104
  • Cell Name: tracheobronchial smooth muscle cell (CL0019019)
    Fold Change: 1.44
    Marker Score: 422
  • Cell Name: neoplastic cell (CL0001063)
    Fold Change: 1.23
    Marker Score: 7482
  • Cell Name: abnormal cell (CL0001061)
    Fold Change: 1.21
    Marker Score: 3623
  • Cell Name: syncytiotrophoblast cell (CL0000525)
    Fold Change: 1.14
    Marker Score: 937
  • Cell Name: lung ciliated cell (CL1000271)
    Fold Change: 1.14
    Marker Score: 540
  • Cell Name: absorptive cell (CL0000212)
    Fold Change: 1.06
    Marker Score: 32710
  • Cell Name: epicardial adipocyte (CL1000309)
    Fold Change: 1.04
    Marker Score: 507
  • Cell Name: cardiac mesenchymal cell (CL0000569)
    Fold Change: 1.04
    Marker Score: 256
  • Cell Name: hematopoietic stem cell (CL0000037)
    Fold Change: 1.03
    Marker Score: 541.5
  • Cell Name: cerebral cortex GABAergic interneuron (CL0010011)
    Fold Change: 1
    Marker Score: 71816
  • Cell Name: forebrain radial glial cell (CL0013000)
    Fold Change: 1
    Marker Score: 48041
  • Cell Name: peripheral nervous system neuron (CL2000032)
    Fold Change: 0.99
    Marker Score: 1112
  • Cell Name: intestinal crypt stem cell of colon (CL0009043)
    Fold Change: 0.94
    Marker Score: 2390
  • Cell Name: transit amplifying cell (CL0009010)
    Fold Change: 0.92
    Marker Score: 5261
  • Cell Name: primitive red blood cell (CL0002355)
    Fold Change: 0.89
    Marker Score: 664.5
  • Cell Name: Kupffer cell (CL0000091)
    Fold Change: 0.86
    Marker Score: 865
  • Cell Name: B-1b B cell (CL0000821)
    Fold Change: 0.86
    Marker Score: 198
  • Cell Name: early T lineage precursor (CL0002425)
    Fold Change: 0.82
    Marker Score: 625
  • Cell Name: brush cell (CL0002204)
    Fold Change: 0.78
    Marker Score: 713
  • Cell Name: plasmablast (CL0000980)
    Fold Change: 0.78
    Marker Score: 1038.5
  • Cell Name: conventional dendritic cell (CL0000990)
    Fold Change: 0.77
    Marker Score: 532.5
  • Cell Name: B cell (CL0000236)
    Fold Change: 0.77
    Marker Score: 735
  • Cell Name: Cajal-Retzius cell (CL0000695)
    Fold Change: 0.77
    Marker Score: 397
  • Cell Name: intestinal epithelial cell (CL0002563)
    Fold Change: 0.76
    Marker Score: 1228
  • Cell Name: Schwann cell (CL0002573)
    Fold Change: 0.74
    Marker Score: 256
  • Cell Name: capillary endothelial cell (CL0002144)
    Fold Change: 0.73
    Marker Score: 787
  • Cell Name: glutamatergic neuron (CL0000679)
    Fold Change: 0.7
    Marker Score: 7144
  • Cell Name: neutrophil progenitor cell (CL0000834)
    Fold Change: 0.7
    Marker Score: 180
  • Cell Name: reticulocyte (CL0000558)
    Fold Change: 0.68
    Marker Score: 288
  • Cell Name: osteoblast (CL0000062)
    Fold Change: 0.63
    Marker Score: 340
  • Cell Name: pre-B-I cell (CL0000956)
    Fold Change: 0.63
    Marker Score: 160
  • Cell Name: erythrocyte (CL0000232)
    Fold Change: 0.62
    Marker Score: 342
  • Cell Name: trophoblast giant cell (CL0002488)
    Fold Change: 0.61
    Marker Score: 196
  • Cell Name: erythroid lineage cell (CL0000764)
    Fold Change: 0.6
    Marker Score: 297
  • Cell Name: hematopoietic multipotent progenitor cell (CL0000837)
    Fold Change: 0.58
    Marker Score: 284
  • Cell Name: endothelial cell of lymphatic vessel (CL0002138)
    Fold Change: 0.56
    Marker Score: 347
  • Cell Name: granulocyte (CL0000094)
    Fold Change: 0.55
    Marker Score: 247
  • Cell Name: intestinal enteroendocrine cell (CL1001516)
    Fold Change: 0.54
    Marker Score: 434
  • Cell Name: common lymphoid progenitor (CL0000051)
    Fold Change: 0.53
    Marker Score: 363
  • Cell Name: mesenchymal cell (CL0008019)
    Fold Change: 0.52
    Marker Score: 889
  • Cell Name: interstitial cell of ovary (CL0002094)
    Fold Change: 0.5
    Marker Score: 3280
  • Cell Name: smooth muscle cell (CL0000192)
    Fold Change: 0.49
    Marker Score: 321
  • Cell Name: skeletal muscle satellite cell (CL0000594)
    Fold Change: 0.48
    Marker Score: 324
  • Cell Name: vascular associated smooth muscle cell (CL0000359)
    Fold Change: 0.48
    Marker Score: 218
  • Cell Name: cerebral cortex endothelial cell (CL1001602)
    Fold Change: 0.47
    Marker Score: 278
  • Cell Name: promyelocyte (CL0000836)
    Fold Change: 0.46
    Marker Score: 227
  • Cell Name: endothelial cell of artery (CL1000413)
    Fold Change: 0.46
    Marker Score: 190
  • Cell Name: megakaryocyte (CL0000556)
    Fold Change: 0.43
    Marker Score: 247
  • Cell Name: mesothelial cell (CL0000077)
    Fold Change: 0.43
    Marker Score: 174
  • Cell Name: common myeloid progenitor (CL0000049)
    Fold Change: 0.42
    Marker Score: 112
  • Cell Name: ciliated epithelial cell (CL0000067)
    Fold Change: 0.41
    Marker Score: 186
  • Cell Name: GABAergic neuron (CL0000617)
    Fold Change: 0.4
    Marker Score: 1687.5
  • Cell Name: astrocyte (CL0000127)
    Fold Change: 0.37
    Marker Score: 321.5
  • Cell Name: interstitial cell of Cajal (CL0002088)
    Fold Change: 0.36
    Marker Score: 126
  • Cell Name: dermis microvascular lymphatic vessel endothelial cell (CL2000041)
    Fold Change: 0.36
    Marker Score: 116
  • Cell Name: dendritic cell (CL0000451)
    Fold Change: 0.34
    Marker Score: 235
  • Cell Name: B-1a B cell (CL0000820)
    Fold Change: 0.34
    Marker Score: 82
  • Cell Name: pericyte (CL0000669)
    Fold Change: 0.32
    Marker Score: 185
  • Cell Name: kidney interstitial cell (CL1000500)
    Fold Change: 0.31
    Marker Score: 222
  • Cell Name: photoreceptor cell (CL0000210)
    Fold Change: 0.3
    Marker Score: 228
  • Cell Name: mast cell (CL0000097)
    Fold Change: 0.29
    Marker Score: 171
  • Cell Name: respiratory epithelial cell (CL0002368)
    Fold Change: 0.29
    Marker Score: 162
  • Cell Name: plasmacytoid dendritic cell (CL0000784)
    Fold Change: 0.29
    Marker Score: 155
  • Cell Name: neural progenitor cell (CL0011020)
    Fold Change: 0.28
    Marker Score: 1101
  • Cell Name: precursor B cell (CL0000817)
    Fold Change: 0.28
    Marker Score: 185
  • Cell Name: late pro-B cell (CL0002048)
    Fold Change: 0.28
    Marker Score: 329
  • Cell Name: fraction A pre-pro B cell (CL0002045)
    Fold Change: 0.28
    Marker Score: 277
  • Cell Name: mesangial cell (CL0000650)
    Fold Change: 0.27
    Marker Score: 328
  • Cell Name: Sertoli cell (CL0000216)
    Fold Change: 0.26
    Marker Score: 1543
  • Cell Name: pre-conventional dendritic cell (CL0002010)
    Fold Change: 0.26
    Marker Score: 77
  • Cell Name: neuroendocrine cell (CL0000165)
    Fold Change: 0.26
    Marker Score: 101
  • Cell Name: blood vessel endothelial cell (CL0000071)
    Fold Change: 0.26
    Marker Score: 261
  • Cell Name: CD4-positive, alpha-beta memory T cell (CL0000897)
    Fold Change: 0.26
    Marker Score: 152
  • Cell Name: ependymal cell (CL0000065)
    Fold Change: 0.26
    Marker Score: 90
  • Cell Name: myelocyte (CL0002193)
    Fold Change: 0.25
    Marker Score: 110
  • Cell Name: chondrocyte (CL0000138)
    Fold Change: 0.25
    Marker Score: 113

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Other Information

**Key characteristics:** - The HBG1 gene is located on chromosome 15q21.1. - It is a single copy gene, with an average length of 28,000 base pairs. - The protein is expressed in a variety of cell types, including hepatocytes, lymphocytes, endothelial cells of the vascular tree, erythroblasts, pulmonary interstitial fibroblasts, innate lymphoid cells, hematopoietic cells, endocardial cells, hepatic stellate cells, and erythroid progenitor cells. - The HBG1 protein is a glycoprotein, meaning it has a single polypeptide chain with a molecular weight of approximately 64,500 Da. **Pathways and functions:** - The HBG1 gene is involved in several important pathways and functions, including: - Carbon dioxide transport: The HBG1 protein is the main protein responsible for carrying oxygen in red blood cells. - Cellular oxidant detoxification: The HBG1 protein is involved in the detoxification of reactive oxygen species and other harmful substances. - Cytosol: The HBG1 protein is a component of the cytosol, where it helps to maintain the integrity of the cell. - Factors involved in megakaryocyte development and platelet production: The HBG1 protein is a key factor in the development of megakaryocytes, the cells that produce red blood cells. - Haptoglobin-hemoglobin complex: The HBG1 protein is a component of the haptoglobin-hemoglobin complex, which is responsible for transporting oxygen in the blood. - Haptoglobin binding: The HBG1 protein binds to haptoglobin, a protein that is also involved in oxygen transport. - Hemoglobin alpha binding: The HBG1 protein also binds to hemoglobin alpha, another protein that is responsible for oxygen transport. - Hemoglobin complex: The HBG1 protein is a component of the hemoglobin complex, which is responsible for carrying oxygen in the blood. - Hemostasis: The HBG1 protein is involved in the regulation of blood clotting. - Hydrogen peroxide catabolic process: The HBG1 protein is involved in the catabolism of hydrogen peroxide, a reactive oxygen species that can damage cells. - Metal ion binding: The HBG1 protein binds to various metal ions, including iron, copper, and zinc. - Organic acid binding: The HBG1 protein also binds to organic acids, such as lactate and pyruvate. - Oxygen binding: The HBG1 protein is a key oxygen carrier in the blood, carrying oxygen from the lungs to the tissues. **Clinical significance:** - Mutations in the HBG1 gene have been linked to several diseases, including sickle cell anemia and thalassemias. - In sickle cell anemia, mutations in the HBG1 gene result in the production of a defective hemoglobin protein that is unable to carry oxygen effectively. This leads to the formation of sickle-shaped red blood cells, which can block blood flow and cause serious health problems. - In thalassemias, mutations in the HBG1 gene result in the production of a defective hemoglobin protein that is only partially functional. This leads to reduced oxygen transport and can also cause health problems.

Genular Protein ID: 730414054

Symbol: HBG1_HUMAN

Name: Hemoglobin subunit gamma-1

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 7438203

Title: Human fetal G gamma- and A gamma-globin genes: complete nucleotide sequences suggest that DNA can be exchanged between these duplicated genes.

PubMed ID: 7438203

DOI: 10.1016/0092-8674(80)90426-2

PubMed ID: 7332928

Title: A history of the human fetal globin gene duplication.

PubMed ID: 7332928

DOI: 10.1016/0092-8674(81)90302-0

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 7690768

Title: The M gamma chain of human fetal hemoglobin is an A gamma chain with an in vitro modification of gamma 141 leucine to hydroxyleucine.

PubMed ID: 7690768

DOI: 10.1016/0378-4347(93)80418-4

PubMed ID: 16131492

Title: {gamma}-Globin gene expression in chemical inducer of dimerization (CID)-dependent multipotential cells established from human {beta}-globin locus yeast artificial chromosome ({beta}-YAC) transgenic mice.

PubMed ID: 16131492

DOI: 10.1074/jbc.m504402200

PubMed ID: 20925047

Title: Haemoglobin level, proportion of haemoglobin Bart's and haemoglobin Portland in fetuses affected by homozygous alpha0-thalassemia from 12 to 40 weeks' gestation.

PubMed ID: 20925047

DOI: 10.1002/pd.2619

PubMed ID: 21269460

Title: Initial characterization of the human central proteome.

PubMed ID: 21269460

DOI: 10.1186/1752-0509-5-17

PubMed ID: 21747884

Title: Hemoglobin F level in different hemoglobin variants.

PubMed ID: 21747884

DOI: 10.5045/kjh.2011.46.2.118

PubMed ID: 22096240

Title: Fetal hemoglobin levels and morbidity in untransfused patients with beta-thalassemia intermedia.

PubMed ID: 22096240

DOI: 10.1182/blood-2011-09-382408

PubMed ID: 23186163

Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.

PubMed ID: 23186163

DOI: 10.1021/pr300630k

PubMed ID: 11514664

Title: Oligomerization and ligand binding in a homotetrameric hemoglobin: two high-resolution crystal structures of hemoglobin Bart's (gamma(4)), a marker for alpha-thalassemia.

PubMed ID: 11514664

DOI: 10.1110/ps.11701

PubMed ID: 5554303

Title: Human fetal hemoglobin F 1. Acetylation status.

PubMed ID: 5554303

DOI: 10.1016/s0021-9258(18)62282-3

PubMed ID: 2454900

Title: Hb F-Baskent or alpha 2A gamma 128(H6)Ala-->Thr.

PubMed ID: 2454900

DOI: 10.3109/03630268808996888

PubMed ID: 2417989

Title: Hb F-Beech Island or alpha 2A gamma 2(53)(D4)Ala-->Asp.

PubMed ID: 2417989

DOI: 10.3109/03630268508997032

PubMed ID: 6186637

Title: Hb F-Bonaire-Ga or alpha 2 A gamma 2 39(C5) Gln replaced by Arg, characterized by high pressure liquid chromatographic and microsequencing procedures.

PubMed ID: 6186637

DOI: 10.3109/03630268209046453

PubMed ID: 6199326

Title: Hb F-Calluna or alpha 2 gamma 2(12 Thr replaced by Arg; 75Ile; 136Ala) in a Caucasian baby.

PubMed ID: 6199326

DOI: 10.3109/03630268309027936

PubMed ID: 2419280

Title: Hb F-Cobb or alpha(2)A gamma(2)37(C3)Trp-->Gly.

PubMed ID: 2419280

DOI: 10.3109/03630268508997043

PubMed ID: 2411679

Title: Hb F-Dammam or alpha 2A gamma 2(79) (EF3) Asp-->Asn.

PubMed ID: 2411679

DOI: 10.3109/03630268508996998

PubMed ID: 4455303

Title: Genetic haemoglobin abnormalities in about 9000 Black and 7000 White newborns; haemoglobin F Dickinson (Agamma97His-Arg), a new variant.

PubMed ID: 4455303

DOI: 10.1111/j.1365-2141.1974.tb06670.x

PubMed ID: 2467893

Title: Hb F-Fukuyama or A gamma T43(CD2)Asp-->Asn.

PubMed ID: 2467893

DOI: 10.3109/03630268908998058

PubMed ID: 6038320

Title: Haemoglobin F Hull (gamma-121 glutamic acid-->lysine), homologous with haemoglobins O Arab and O Indonesia.

PubMed ID: 6038320

DOI: 10.1136/bmj.3.5564.531

PubMed ID: 6163752

Title: Survey of cord blood hemoglobin in Japan and identification of two new gamma chain variants.

PubMed ID: 6163752

DOI: 10.3109/03630268108996920

PubMed ID: 6197997

Title: Characterization of a new fetal hemoglobin variant, Hb F Izumi A gamma 6Glu replaced by Gly, by molecular secondary ion mass spectrometry.

PubMed ID: 6197997

DOI: 10.1016/0167-4838(83)90231-5

PubMed ID: 5491586

Title: Haemoglobin F Jamaica (alpha-2 gamma-2 61 Lys leads to Glu; 136 Ala).

PubMed ID: 5491586

DOI: 10.1111/j.1365-2141.1970.tb01450.x

PubMed ID: 1703137

Title: Hb F-Jiangsu, the first gamma chain variant with a valine->methionine substitution: alpha 2A gamma 2 134(H12)Val->Met.

PubMed ID: 1703137

DOI: 10.3109/03630269009046959

PubMed ID: 6175602

Title: A new gamma chain variant, HB F Kotobuki or AI gamma 6 (A3) Glu leads to Gly.

PubMed ID: 6175602

DOI: 10.3109/03630268208996931

PubMed ID: 4765089

Title: Structural identification of haemoglobin F Kuala Lumpur: alpha2 gamma2 22(B4)Asp leads to Gly; 136 Ala.

PubMed ID: 4765089

DOI: 10.1016/0005-2795(73)90297-3

PubMed ID: 7928382

Title: Hb F-Macedonia-I or alpha 2A gamma (2)2(NA2)His-->Gln.

PubMed ID: 7928382

DOI: 10.3109/03630269409043626

PubMed ID: 2581920

Title: Hb F-Pendergrass, an A gamma I variant with a Pro-->Arg substitution at position gamma 36(C2).

PubMed ID: 2581920

DOI: 10.3109/03630268508996985

PubMed ID: 6183236

Title: A new gamma chain variant: Hb F-Pordenone [gamma 6(A3) Glu replaced by Gln: 75ILE: 136ALA].

PubMed ID: 6183236

DOI: 10.3109/03630268208996945

PubMed ID: 808940

Title: A new Hb variant: Hb F Sardinia gamma75(E19) isoleucine leads to threonine found in a family with Hb G Philadelphia, beta-chain deficiency and a Lepore-like haemoglobin indistinguishable from Hb A2.

PubMed ID: 808940

DOI: 10.1159/000208204

PubMed ID: 6188719

Title: Hb F-Siena (alpha 2 a gamma t2 121 (GH4) Glu leads to Lys). A new fetal hemoglobin variant.

PubMed ID: 6188719

DOI: 10.3109/03630268309038403

PubMed ID: 6019034

Title: Haemoglobin F Texas I(alpha-2,gamma-2-5glu-lys): a variant of haemoglobin F.

PubMed ID: 6019034

DOI: 10.1111/j.1365-2141.1967.tb08737.x

PubMed ID: 1138921

Title: Haemoglobin F Victoria Jubilee (alpha 2 A gamma 2 80 Asp-Try).

PubMed ID: 1138921

DOI: 10.1016/0005-2795(75)90230-5

PubMed ID: 1802881

Title: Gamma chain abnormalities and gamma-globin gene rearrangements in newborn babies of various populations.

PubMed ID: 1802881

DOI: 10.3109/03630269108998857

PubMed ID: 2448269

Title: Hb F-Xin-Su or A gamma I73(E17)Asp-->His: a new slow-moving fetal hemoglobin variant.

PubMed ID: 2448269

DOI: 10.3109/03630268708998007

PubMed ID: 2448268

Title: Hb F-Xinjiang or A gamma T25(B7)Gly-->Arg: a new slow-moving unstable fetal hemoglobin variant.

PubMed ID: 2448268

DOI: 10.3109/03630268708998006

PubMed ID: 6198905

Title: HB F-Yamaguchi (gamma 75Thr, gamma 80Asn, gamma 136Ala) is associated with G gamma-thalassemia.

PubMed ID: 6198905

DOI: 10.1002/ajh.2830160212

Sequence Information:

  • Length: 147
  • Mass: 16128
  • Checksum: 0CE4D9E932416DCF
  • Sequence:
  • MGHFTEEDKA TITSLWGKVN VEDAGGETLG RLLVVYPWTQ RFFDSFGNLS SASAIMGNPK 
    VKAHGKKVLT SLGDATKHLD DLKGTFAQLS ELHCDKLHVD PENFKLLGNV LVTVLAIHFG 
    KEFTPEVQAS WQKMVTAVAS ALSSRYH

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. For the full schema, download it here.