Details for: CL0002563

Cell ID: CL0002563

Cell Name: intestinal epithelial cell

Marker Score Threshold: 1624
(Derived using integrated single-cell and genomic data)

Description: An epithelial cell of the intestine.

Genes (max top 100)

(Marker Score score is uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)

  • Gene Symbol: MALAT1 (ENSG00000251562)
    Fold Change: 11.38
    Ensembl ID: ENSG00000251562
  • Gene Symbol: RNU1 14P (ENSG00000199629)
    Fold Change: 2.52
    Ensembl ID: ENSG00000199629
  • Gene Symbol: TTTY5 (ENSG00000215560)
    Fold Change: 2.52
    Ensembl ID: ENSG00000215560
  • Gene Symbol: CSPG4P1Y (ENSG00000240450)
    Fold Change: 2.52
    Ensembl ID: ENSG00000240450
  • Gene Symbol: TTTY20 (ENSG00000232808)
    Fold Change: 2.52
    Ensembl ID: ENSG00000232808
  • Gene Symbol: TTTY3B (ENSG00000280961)
    Fold Change: 2.52
    Ensembl ID: ENSG00000280961
  • Gene Symbol: CT45A6 (ENSG00000278289)
    Fold Change: 2.52
    Ensembl ID: ENSG00000278289
  • Gene Symbol: MIR509 2 (ENSG00000212013)
    Fold Change: 2.52
    Ensembl ID: ENSG00000212013
  • Gene Symbol: CXorf51A (ENSG00000224440)
    Fold Change: 2.52
    Ensembl ID: ENSG00000224440
  • Gene Symbol: VTRNA3 1P (ENSG00000199422)
    Fold Change: 2.52
    Ensembl ID: ENSG00000199422
  • Gene Symbol: RNU7 6P (ENSG00000252654)
    Fold Change: 2.52
    Ensembl ID: ENSG00000252654
  • Gene Symbol: RNU7 22P (ENSG00000252482)
    Fold Change: 2.52
    Ensembl ID: ENSG00000252482
  • Gene Symbol: RNU7 53P (ENSG00000252514)
    Fold Change: 2.52
    Ensembl ID: ENSG00000252514
  • Gene Symbol: RNU7 66P (ENSG00000238949)
    Fold Change: 2.52
    Ensembl ID: ENSG00000238949
  • Gene Symbol: RNU7 74P (ENSG00000239010)
    Fold Change: 2.52
    Ensembl ID: ENSG00000239010
  • Gene Symbol: RNY4P14 (ENSG00000200526)
    Fold Change: 2.52
    Ensembl ID: ENSG00000200526
  • Gene Symbol: MIR4317 (ENSG00000283532)
    Fold Change: 2.52
    Ensembl ID: ENSG00000283532
  • Gene Symbol: TTTY17A (ENSG00000228240)
    Fold Change: 2.41
    Ensembl ID: ENSG00000228240
  • Gene Symbol: CSPG4P2Y (ENSG00000244231)
    Fold Change: 2.33
    Ensembl ID: ENSG00000244231
  • Gene Symbol: TTTY7 (ENSG00000147753)
    Fold Change: 2.33
    Ensembl ID: ENSG00000147753
  • Gene Symbol: TTTY21 (ENSG00000228890)
    Fold Change: 2.33
    Ensembl ID: ENSG00000228890
  • Gene Symbol: CT45A2 (ENSG00000271449)
    Fold Change: 2.33
    Ensembl ID: ENSG00000271449
  • Gene Symbol: RNU7 14P (ENSG00000238468)
    Fold Change: 2.33
    Ensembl ID: ENSG00000238468
  • Gene Symbol: MIR3179 2 (ENSG00000257381)
    Fold Change: 2.33
    Ensembl ID: ENSG00000257381
  • Gene Symbol: CLN3 (ENSG00000188603)
    Fold Change: 2.33
    Ensembl ID: ENSG00000188603
  • Gene Symbol: MATR3 (ENSG00000015479)
    Fold Change: 2.31
    Ensembl ID: ENSG00000015479
  • Gene Symbol: RBMY1D (ENSG00000244395)
    Fold Change: 2.29
    Ensembl ID: ENSG00000244395
  • Gene Symbol: TTTY17B (ENSG00000227439)
    Fold Change: 2.29
    Ensembl ID: ENSG00000227439
  • Gene Symbol: PRR23D2 (ENSG00000255378)
    Fold Change: 2.29
    Ensembl ID: ENSG00000255378
  • Gene Symbol: DEFB130B (ENSG00000233050)
    Fold Change: 2.29
    Ensembl ID: ENSG00000233050
  • Gene Symbol: RNU7 69P (ENSG00000252178)
    Fold Change: 2.29
    Ensembl ID: ENSG00000252178
  • Gene Symbol: PRR23D1 (ENSG00000255251)
    Fold Change: 1.88
    Ensembl ID: ENSG00000255251
  • Gene Symbol: EEF1G (ENSG00000254772)
    Fold Change: 1.71
    Ensembl ID: ENSG00000254772
  • Gene Symbol: GBA3 (ENSG00000249948)
    Fold Change: 1.65
    Ensembl ID: ENSG00000249948
  • Gene Symbol: CIDEB (ENSG00000136305)
    Fold Change: 1.59
    Ensembl ID: ENSG00000136305
  • Gene Symbol: MIR3193 (ENSG00000264395)
    Fold Change: 1.48
    Ensembl ID: ENSG00000264395
  • Gene Symbol: OR2W1 (ENSG00000204704)
    Fold Change: 1.48
    Ensembl ID: ENSG00000204704
  • Gene Symbol: LINC01101 (ENSG00000280409)
    Fold Change: 1.48
    Ensembl ID: ENSG00000280409
  • Gene Symbol: TTTY3 (ENSG00000231141)
    Fold Change: 1.48
    Ensembl ID: ENSG00000231141
  • Gene Symbol: RBMY1B (ENSG00000242875)
    Fold Change: 1.48
    Ensembl ID: ENSG00000242875
  • Gene Symbol: OR8K1 (ENSG00000150261)
    Fold Change: 1.48
    Ensembl ID: ENSG00000150261
  • Gene Symbol: LOC401589 (ENSG00000182776)
    Fold Change: 1.48
    Ensembl ID: ENSG00000182776
  • Gene Symbol: MIR135A1 (ENSG00000207926)
    Fold Change: 1.48
    Ensembl ID: ENSG00000207926
  • Gene Symbol: MIR183 (ENSG00000207691)
    Fold Change: 1.48
    Ensembl ID: ENSG00000207691
  • Gene Symbol: MIR196A2 (ENSG00000207924)
    Fold Change: 1.48
    Ensembl ID: ENSG00000207924
  • Gene Symbol: MIR33A (ENSG00000207932)
    Fold Change: 1.48
    Ensembl ID: ENSG00000207932
  • Gene Symbol: MIR374A (ENSG00000199168)
    Fold Change: 1.48
    Ensembl ID: ENSG00000199168
  • Gene Symbol: DEFB105B (ENSG00000186599)
    Fold Change: 1.48
    Ensembl ID: ENSG00000186599
  • Gene Symbol: MIR193B (ENSG00000207639)
    Fold Change: 1.48
    Ensembl ID: ENSG00000207639
  • Gene Symbol: MIR520E (ENSG00000207599)
    Fold Change: 1.48
    Ensembl ID: ENSG00000207599
  • Gene Symbol: MIR518D (ENSG00000283330)
    Fold Change: 1.48
    Ensembl ID: ENSG00000283330
  • Gene Symbol: MIR527 (ENSG00000207979)
    Fold Change: 1.48
    Ensembl ID: ENSG00000207979
  • Gene Symbol: MIR513A1 (ENSG00000207873)
    Fold Change: 1.48
    Ensembl ID: ENSG00000207873
  • Gene Symbol: MIR513A2 (ENSG00000207984)
    Fold Change: 1.48
    Ensembl ID: ENSG00000207984
  • Gene Symbol: MIR506 (ENSG00000207731)
    Fold Change: 1.48
    Ensembl ID: ENSG00000207731
  • Gene Symbol: MIR507 (ENSG00000207969)
    Fold Change: 1.48
    Ensembl ID: ENSG00000207969
  • Gene Symbol: MIR510 (ENSG00000207641)
    Fold Change: 1.48
    Ensembl ID: ENSG00000207641
  • Gene Symbol: MIR608 (ENSG00000207551)
    Fold Change: 1.48
    Ensembl ID: ENSG00000207551
  • Gene Symbol: MIR655 (ENSG00000207646)
    Fold Change: 1.48
    Ensembl ID: ENSG00000207646
  • Gene Symbol: MIR657 (ENSG00000207736)
    Fold Change: 1.48
    Ensembl ID: ENSG00000207736
  • Gene Symbol: SPATA31A5 (ENSG00000276581)
    Fold Change: 1.48
    Ensembl ID: ENSG00000276581
  • Gene Symbol: LOC728660 (ENSG00000233145)
    Fold Change: 1.48
    Ensembl ID: ENSG00000233145
  • Gene Symbol: MIR944 (ENSG00000216058)
    Fold Change: 1.48
    Ensembl ID: ENSG00000216058
  • Gene Symbol: RNU7 34P (ENSG00000238904)
    Fold Change: 1.48
    Ensembl ID: ENSG00000238904
  • Gene Symbol: RNU7 48P (ENSG00000238386)
    Fold Change: 1.48
    Ensembl ID: ENSG00000238386
  • Gene Symbol: RNU7 54P (ENSG00000238590)
    Fold Change: 1.48
    Ensembl ID: ENSG00000238590
  • Gene Symbol: RNU6ATAC2P (ENSG00000210678)
    Fold Change: 1.48
    Ensembl ID: ENSG00000210678
  • Gene Symbol: MIR320C1 (ENSG00000221493)
    Fold Change: 1.48
    Ensembl ID: ENSG00000221493
  • Gene Symbol: MIR1270 (ENSG00000238517)
    Fold Change: 1.48
    Ensembl ID: ENSG00000238517
  • Gene Symbol: MIR548I4 (ENSG00000221494)
    Fold Change: 1.48
    Ensembl ID: ENSG00000221494
  • Gene Symbol: MIR1237 (ENSG00000221273)
    Fold Change: 1.48
    Ensembl ID: ENSG00000221273
  • Gene Symbol: MIR2114 (ENSG00000252454)
    Fold Change: 1.48
    Ensembl ID: ENSG00000252454
  • Gene Symbol: RNY4P18 (ENSG00000212409)
    Fold Change: 1.48
    Ensembl ID: ENSG00000212409
  • Gene Symbol: MIR1273C (ENSG00000264814)
    Fold Change: 1.48
    Ensembl ID: ENSG00000264814
  • Gene Symbol: MIR3182 (ENSG00000263785)
    Fold Change: 1.48
    Ensembl ID: ENSG00000263785
  • Gene Symbol: MIR548S (ENSG00000265056)
    Fold Change: 1.43
    Ensembl ID: ENSG00000265056
  • Gene Symbol: TGIF2LY (ENSG00000176679)
    Fold Change: 1.3
    Ensembl ID: ENSG00000176679
  • Gene Symbol: MIR200C (ENSG00000207713)
    Fold Change: 1.29
    Ensembl ID: ENSG00000207713
  • Gene Symbol: CT45A5 (ENSG00000228836)
    Fold Change: 1.29
    Ensembl ID: ENSG00000228836
  • Gene Symbol: MIR375 (ENSG00000198973)
    Fold Change: 1.29
    Ensembl ID: ENSG00000198973
  • Gene Symbol: MIR429 (ENSG00000198976)
    Fold Change: 1.29
    Ensembl ID: ENSG00000198976
  • Gene Symbol: GAGE12G (ENSG00000215269)
    Fold Change: 1.29
    Ensembl ID: ENSG00000215269
  • Gene Symbol: TSPY8 (ENSG00000229549)
    Fold Change: 1.29
    Ensembl ID: ENSG00000229549
  • Gene Symbol: RNU7 56P (ENSG00000238709)
    Fold Change: 1.29
    Ensembl ID: ENSG00000238709
  • Gene Symbol: MIR1299 (ENSG00000275377)
    Fold Change: 1.29
    Ensembl ID: ENSG00000275377
  • Gene Symbol: MIR513B (ENSG00000207871)
    Fold Change: 1.29
    Ensembl ID: ENSG00000207871
  • Gene Symbol: MIR514B (ENSG00000252583)
    Fold Change: 1.29
    Ensembl ID: ENSG00000252583
  • Gene Symbol: ENPP7P8 (ENSG00000255319)
    Fold Change: 1.29
    Ensembl ID: ENSG00000255319
  • Gene Symbol: MIR1301 (ENSG00000221445)
    Fold Change: 1.28
    Ensembl ID: ENSG00000221445
  • Gene Symbol: SPATA13 (ENSG00000182957)
    Fold Change: 1.27
    Ensembl ID: ENSG00000182957
  • Gene Symbol: NBR2 (ENSG00000198496)
    Fold Change: 1.2
    Ensembl ID: ENSG00000198496
  • Gene Symbol: TTN (ENSG00000155657)
    Fold Change: 1.2
    Ensembl ID: ENSG00000155657
  • Gene Symbol: CIST1 (ENSG00000284797)
    Fold Change: 1.17
    Ensembl ID: ENSG00000284797
  • Gene Symbol: LIMS3 LOC440895 (ENSG00000284337)
    Fold Change: 1.15
    Ensembl ID: ENSG00000284337
  • Gene Symbol: NME1 NME2 (ENSG00000011052)
    Fold Change: 1.15
    Ensembl ID: ENSG00000011052
  • Gene Symbol: MIR7 2 (ENSG00000207703)
    Fold Change: 1.13
    Ensembl ID: ENSG00000207703
  • Gene Symbol: SMG1P3 (ENSG00000180747)
    Fold Change: 1.1
    Ensembl ID: ENSG00000180747
  • Gene Symbol: RPL13 (ENSG00000167526)
    Fold Change: 1.07
    Ensembl ID: ENSG00000167526
  • Gene Symbol: TPT1 (ENSG00000133112)
    Fold Change: 1.03
    Ensembl ID: ENSG00000133112
  • Gene Symbol: MIR345 (ENSG00000198984)
    Fold Change: 1.02
    Ensembl ID: ENSG00000198984
Hovered Details

Hover over a box to see details here...

Hovered Details

Hover over a box to see details here...

**Key Characteristics** 1. **Location**: The IEC is found in the epithelial lining of the small and large intestines, where it forms a tight junction with adjacent cells to maintain the gut barrier. 2. **Structure**: IECs have a characteristic apical membrane, basal membrane, and cytoplasm, which are specialized to facilitate nutrient uptake, secretion, and absorption. 3. **Function**: IECs are involved in the absorption of nutrients, regulation of the gut microbiome, and modulation of the immune response, including the production of antimicrobial peptides and cytokines. 4. **Gene Expression**: IECs express a unique set of genes, including long non-coding RNAs (lncRNAs), microRNAs (miRNAs), and messenger RNAs (mRNAs), which are involved in various cellular processes, including cell motility, proliferation, and differentiation. **Gene Expression Profile** The IEC expresses a diverse set of genes, including: * **MALAT1**: a long non-coding RNA involved in the regulation of cell motility and proliferation. * **RNU1 14P**: a microRNA involved in the regulation of cardiac muscle myoblast proliferation. * **TTY5**: a long non-coding RNA involved in the regulation of cell motility and differentiation. * **CSPG4P1Y**: a long non-coding RNA involved in the regulation of cell proliferation and differentiation. * **TTY20**: a long non-coding RNA involved in the regulation of cell motility and differentiation. * **TTY3B**: a long non-coding RNA involved in the regulation of cell proliferation and differentiation. * **CT45A6**: a long non-coding RNA involved in the regulation of cell proliferation and differentiation. * **MIR509 2**: a microRNA involved in the regulation of mirna catabolic process. * **CXorf51A**: a protein-coding gene involved in the regulation of cell motility and proliferation. * **VTRNA3 1P**: a microRNA involved in the regulation of mirna catabolic process. **Clinical Significance** The IEC plays a crucial role in maintaining the integrity of the gut barrier, regulating nutrient absorption, and modulating the immune response. Dysregulation of IEC function has been implicated in various diseases, including: * **Inflammatory bowel disease (IBD)**: characterized by chronic inflammation of the gut, which can lead to damage to the gut barrier and impaired nutrient absorption. * **Cancer**: IECs can give rise to various types of cancer, including colorectal cancer, which is characterized by uncontrolled cell proliferation and differentiation. * **Gastrointestinal disorders**: IEC dysfunction can lead to various gastrointestinal disorders, including irritable bowel syndrome (IBS) and gastroesophageal reflux disease (GERD). Understanding the function and regulation of the IEC is essential for developing effective therapeutic strategies for these diseases. Further research is needed to elucidate the molecular mechanisms underlying IEC function and to identify potential therapeutic targets for the treatment of IBD, cancer, and other gastrointestinal disorders.