Details for: SIX1
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: skeletal muscle myoblast (CL0000515)
Fold Change: 5.1778
Cell Significance Index: 56.2900 - Cell Name: cortical thymic epithelial cell (CL0002364)
Fold Change: 3.0754
Cell Significance Index: 25.4400 - Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
Fold Change: 2.5494
Cell Significance Index: 88.5900 - Cell Name: sensory neuron (CL0000101)
Fold Change: 1.8859
Cell Significance Index: 10.7200 - Cell Name: respiratory goblet cell (CL0002370)
Fold Change: 1.5676
Cell Significance Index: 16.1700 - Cell Name: type I muscle cell (CL0002211)
Fold Change: 1.4638
Cell Significance Index: 35.7200 - Cell Name: skeletal muscle satellite stem cell (CL0008011)
Fold Change: 0.8401
Cell Significance Index: 8.7700 - Cell Name: type II muscle cell (CL0002212)
Fold Change: 0.7078
Cell Significance Index: 11.4200 - Cell Name: odontoblast (CL0000060)
Fold Change: 0.6784
Cell Significance Index: 86.9700 - Cell Name: leptomeningeal cell (CL0000708)
Fold Change: 0.4671
Cell Significance Index: 9.9900 - Cell Name: kidney epithelial cell (CL0002518)
Fold Change: 0.4633
Cell Significance Index: 13.6500 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: 0.4446
Cell Significance Index: 20.7300 - Cell Name: keratocyte (CL0002363)
Fold Change: 0.3356
Cell Significance Index: 5.3300 - Cell Name: skeletal muscle fiber (CL0008002)
Fold Change: 0.1681
Cell Significance Index: 4.3200 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: 0.0485
Cell Significance Index: 5.9600 - Cell Name: neural progenitor cell (CL0011020)
Fold Change: 0.0354
Cell Significance Index: 0.3500 - Cell Name: fibro/adipogenic progenitor cell (CL0009099)
Fold Change: 0.0283
Cell Significance Index: 1.4300 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: -0.0025
Cell Significance Index: -0.4400 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0080
Cell Significance Index: -5.9600 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: -0.0091
Cell Significance Index: -17.1500 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: -0.0154
Cell Significance Index: -0.2100 - Cell Name: cell in vitro (CL0001034)
Fold Change: -0.0164
Cell Significance Index: -8.9400 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: -0.0192
Cell Significance Index: -12.2000 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: -0.0192
Cell Significance Index: -14.5400 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: -0.0241
Cell Significance Index: -10.9300 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0264
Cell Significance Index: -14.8900 - Cell Name: hair follicular keratinocyte (CL2000092)
Fold Change: -0.0394
Cell Significance Index: -17.4000 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.0478
Cell Significance Index: -13.7400 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: -0.0538
Cell Significance Index: -19.2800 - Cell Name: neoplastic cell (CL0001063)
Fold Change: -0.0548
Cell Significance Index: -10.8700 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.0654
Cell Significance Index: -6.6800 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.0738
Cell Significance Index: -15.5500 - Cell Name: epithelial cell of stomach (CL0002178)
Fold Change: -0.0759
Cell Significance Index: -8.8400 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: -0.0793
Cell Significance Index: -4.1200 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: -0.0823
Cell Significance Index: -11.9700 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: -0.0898
Cell Significance Index: -15.3300 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: -0.0928
Cell Significance Index: -18.6100 - Cell Name: lactocyte (CL0002325)
Fold Change: -0.1055
Cell Significance Index: -13.6300 - Cell Name: tonsil germinal center B cell (CL2000006)
Fold Change: -0.1136
Cell Significance Index: -13.4000 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.1270
Cell Significance Index: -14.5500 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: -0.1304
Cell Significance Index: -17.9100 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: -0.1536
Cell Significance Index: -11.4500 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: -0.1654
Cell Significance Index: -17.2200 - Cell Name: fibroblast of dermis (CL0002551)
Fold Change: -0.1796
Cell Significance Index: -3.7600 - Cell Name: sebum secreting cell (CL0000317)
Fold Change: -0.1875
Cell Significance Index: -13.2600 - Cell Name: chondroblast (CL0000058)
Fold Change: -0.2146
Cell Significance Index: -1.2600 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: -0.2330
Cell Significance Index: -15.6700 - Cell Name: basal cell of prostate epithelium (CL0002341)
Fold Change: -0.2362
Cell Significance Index: -6.4300 - Cell Name: fallopian tube secretory epithelial cell (CL4030006)
Fold Change: -0.2518
Cell Significance Index: -3.9000 - Cell Name: basal epithelial cell of prostatic duct (CL0002236)
Fold Change: -0.2698
Cell Significance Index: -2.4000 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: -0.2732
Cell Significance Index: -12.8400 - Cell Name: endothelial cell of venule (CL1000414)
Fold Change: -0.2830
Cell Significance Index: -3.2200 - Cell Name: L4 intratelencephalic projecting glutamatergic neuron (CL4030063)
Fold Change: -0.2837
Cell Significance Index: -3.1100 - Cell Name: epithelial cell of nephron (CL1000449)
Fold Change: -0.2883
Cell Significance Index: -2.4500 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: -0.3056
Cell Significance Index: -13.8500 - Cell Name: neuron associated cell (CL0000095)
Fold Change: -0.3256
Cell Significance Index: -13.3400 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: -0.3407
Cell Significance Index: -19.1200 - Cell Name: stratified epithelial cell (CL0000079)
Fold Change: -0.3846
Cell Significance Index: -14.1200 - Cell Name: CD14-low, CD16-positive monocyte (CL0002396)
Fold Change: -0.3910
Cell Significance Index: -9.4700 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: -0.3981
Cell Significance Index: -20.9000 - Cell Name: fibroblast of mammary gland (CL0002555)
Fold Change: -0.4036
Cell Significance Index: -11.5700 - Cell Name: choroid plexus epithelial cell (CL0000706)
Fold Change: -0.4118
Cell Significance Index: -4.9000 - Cell Name: ciliated columnar cell of tracheobronchial tree (CL0002145)
Fold Change: -0.4300
Cell Significance Index: -3.9500 - Cell Name: CD4-positive, alpha-beta memory T cell, CD45RO-positive (CL0001204)
Fold Change: -0.4379
Cell Significance Index: -12.8600 - Cell Name: serous secreting cell of bronchus submucosal gland (CL4033005)
Fold Change: -0.4527
Cell Significance Index: -4.5300 - Cell Name: medial ganglionic eminence derived interneuron (CL4023063)
Fold Change: -0.4546
Cell Significance Index: -6.5100 - Cell Name: obsolete epithelial cell of alveolus of lung (CL0010003)
Fold Change: -0.4684
Cell Significance Index: -11.6800 - Cell Name: cytotoxic T cell (CL0000910)
Fold Change: -0.4967
Cell Significance Index: -7.2400 - Cell Name: hematopoietic stem cell (CL0000037)
Fold Change: -0.5177
Cell Significance Index: -8.8500 - Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
Fold Change: -0.5224
Cell Significance Index: -18.3000 - Cell Name: skeletal muscle fibroblast (CL0011027)
Fold Change: -0.5262
Cell Significance Index: -3.5700 - Cell Name: kidney cell (CL1000497)
Fold Change: -0.5436
Cell Significance Index: -4.3400 - Cell Name: lung ciliated cell (CL1000271)
Fold Change: -0.5453
Cell Significance Index: -5.3400 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: -0.5467
Cell Significance Index: -14.6500 - Cell Name: hippocampal pyramidal neuron (CL1001571)
Fold Change: -0.5477
Cell Significance Index: -15.6300 - Cell Name: seromucus secreting cell (CL0000159)
Fold Change: -0.5524
Cell Significance Index: -11.5200 - Cell Name: slow muscle cell (CL0000189)
Fold Change: -0.5555
Cell Significance Index: -8.3100 - Cell Name: erythrocyte (CL0000232)
Fold Change: -0.5672
Cell Significance Index: -14.4500 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
Fold Change: -0.5699
Cell Significance Index: -18.6600 - Cell Name: direct pathway medium spiny neuron (CL4023026)
Fold Change: -0.5736
Cell Significance Index: -21.7200 - Cell Name: mesenchymal cell (CL0008019)
Fold Change: -0.5763
Cell Significance Index: -9.6500 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: -0.5862
Cell Significance Index: -18.6700 - Cell Name: granulosa cell (CL0000501)
Fold Change: -0.5895
Cell Significance Index: -15.5000 - Cell Name: neutrophil progenitor cell (CL0000834)
Fold Change: -0.5899
Cell Significance Index: -15.7800 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: -0.5955
Cell Significance Index: -15.9000 - Cell Name: keratinocyte (CL0000312)
Fold Change: -0.5974
Cell Significance Index: -14.9200 - Cell Name: connective tissue cell (CL0002320)
Fold Change: -0.6141
Cell Significance Index: -5.9200 - Cell Name: Purkinje cell (CL0000121)
Fold Change: -0.6179
Cell Significance Index: -13.5300 - Cell Name: ciliated cell (CL0000064)
Fold Change: -0.6271
Cell Significance Index: -6.7900 - Cell Name: microcirculation associated smooth muscle cell (CL0008035)
Fold Change: -0.6274
Cell Significance Index: -5.2700 - Cell Name: endocrine cell (CL0000163)
Fold Change: -0.6437
Cell Significance Index: -7.7800 - Cell Name: CD14-positive, CD16-negative classical monocyte (CL0002057)
Fold Change: -0.6660
Cell Significance Index: -12.3100 - Cell Name: muscle fibroblast (CL1001609)
Fold Change: -0.6661
Cell Significance Index: -4.0800 - Cell Name: caudal ganglionic eminence derived cortical interneuron (CL4023064)
Fold Change: -0.6715
Cell Significance Index: -13.3900 - Cell Name: monocyte (CL0000576)
Fold Change: -0.6761
Cell Significance Index: -7.7800 - Cell Name: CD14-positive monocyte (CL0001054)
Fold Change: -0.6879
Cell Significance Index: -13.4500 - Cell Name: fast muscle cell (CL0000190)
Fold Change: -0.6887
Cell Significance Index: -9.0200 - Cell Name: duct epithelial cell (CL0000068)
Fold Change: -0.7015
Cell Significance Index: -9.7000 - Cell Name: airway submucosal gland collecting duct epithelial cell (CL4033023)
Fold Change: -0.7039
Cell Significance Index: -4.9400 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: -0.7160
Cell Significance Index: -20.6300
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 3313733781
Symbol: SIX1_HUMAN
Name: Homeobox protein SIX1
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 8617500
Title: Cloning of the human SIX1 gene and its assignment to chromosome 14.
PubMed ID: 8617500
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 10801845
Title: Cell cycle-regulated phosphorylation of the human SIX1 homeodomain protein.
PubMed ID: 10801845
PubMed ID: 15123840
Title: The Six1 homeoprotein stimulates tumorigenesis by reactivation of cyclin A1.
PubMed ID: 15123840
PubMed ID: 17130831
Title: Cell cycle regulation of the human Six1 homeoprotein is mediated by APC(Cdh1).
PubMed ID: 17130831
PubMed ID: 26235987
Title: Mutations in TBX18 cause dominant urinary tract malformations via transcriptional dysregulation of ureter development.
PubMed ID: 26235987
PubMed ID: 27923061
Title: Comparative Transcriptomic and Epigenomic Analyses Reveal New Regulators of Murine Brown Adipogenesis.
PubMed ID: 27923061
PubMed ID: 23435380
Title: Structure-function analyses of the human SIX1-EYA2 complex reveal insights into metastasis and BOR syndrome.
PubMed ID: 23435380
DOI: 10.1038/nsmb.2505
PubMed ID: 15141091
Title: SIX1 mutations cause branchio-oto-renal syndrome by disruption of EYA1-SIX1-DNA complexes.
PubMed ID: 15141091
PubMed ID: 17637804
Title: Branchio-oto-renal syndrome: detection of EYA1 and SIX1 mutations in five out of six Danish families by combining linkage, MLPA and sequencing analyses.
PubMed ID: 17637804
PubMed ID: 18330911
Title: SIX1 mutation screening in 247 branchio-oto-renal syndrome families: a recurrent missense mutation associated with BOR.
PubMed ID: 18330911
DOI: 10.1002/humu.20714
PubMed ID: 19497856
Title: Biochemical and functional characterization of six SIX1 Branchio-oto-renal syndrome mutations.
PubMed ID: 19497856
PubMed ID: 21280147
Title: Mutation screening of the EYA1, SIX1, and SIX5 genes in a large cohort of patients harboring branchio-oto-renal syndrome calls into question the pathogenic role of SIX5 mutations.
PubMed ID: 21280147
DOI: 10.1002/humu.21402
Sequence Information:
- Length: 284
- Mass: 32210
- Checksum: A4195376CFB9E3EA
- Sequence:
MSMLPSFGFT QEQVACVCEV LQQGGNLERL GRFLWSLPAC DHLHKNESVL KAKAVVAFHR GNFRELYKIL ESHQFSPHNH PKLQQLWLKA HYVEAEKLRG RPLGAVGKYR VRRKFPLPRT IWDGEETSYC FKEKSRGVLR EWYAHNPYPS PREKRELAEA TGLTTTQVSN WFKNRRQRDR AAEAKERENT ENNNSSSNKQ NQLSPLEGGK PLMSSSEEEF SPPQSPDQNS VLLLQGNMGH ARSSNYSLPG LTASQPSHGL QTHQHQLQDS LLGPLTSSLV DLGS
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.