Details for: SGSM1
Gene ID: 129049
Gene Type: Protein-coding - A gene that serves as a template for producing a messenger RNA (mRNA) molecule, which is then translated into a functional protein.
Symbol: SGSM1
Ensembl ID: ENSG00000167037
Description: small G protein signaling modulator 1
Selected Context(s): Overall
Cell Significance Landscape
Associated with
Significant Cells
Cell Significance Index (CSI) scores for the chosen context(s)
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CSI 22.46rCSI 28.95%PRS 92.04
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CSI 17.38rCSI 42.25%PRS 89.92
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CSI 14.5rCSI 18.04%PRS 90
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CSI 13.53rCSI 42.27%PRS 92.03
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CSI 12.45rCSI 44.79%PRS 90.15
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CSI 12.22rCSI 20.52%PRS 91.61
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CSI 11.89rCSI 44.94%PRS 91.35
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CSI 10.26rCSI 14.03%PRS 95.38
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CSI 9.61rCSI 11.48%PRS 91.48
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CSI 9.14rCSI 19.84%PRS 89.97
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CSI 8.21rCSI 7.29%PRS 95.82
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CSI 7.67rCSI 15.56%PRS 86.81
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CSI 7.53rCSI 44.32%PRS 91.52
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CSI 7.47rCSI 11.91%PRS 93.17
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CSI 7.12rCSI 16.44%PRS 92.49
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CSI 7.03rCSI 28.66%PRS 92.28
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CSI 6.84rCSI 21.39%PRS 93.01
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CSI 6.3rCSI 20.71%PRS 90.32
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CSI 6.03rCSI 44.31%PRS 93.35
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CSI 5.36rCSI 12.83%PRS 91.2
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CSI 5.27rCSI 14.05%PRS 89.16
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CSI 4.97rCSI 8.78%PRS 91.26
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CSI 4.96rCSI 8.13%PRS 94.06
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CSI 4.91rCSI 9.85%PRS 94.69
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CSI 4.72rCSI 7.22%PRS 96.87
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CSI 4.52rCSI 17.06%PRS 88.96
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CSI 4.47rCSI 12.7%PRS 95.09
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CSI 4.46rCSI 11.93%PRS 94.96
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CSI 4.3rCSI 9.51%PRS 96.77
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CSI 4.25rCSI 6.84%PRS 91.85
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CSI 4.2rCSI 7.36%PRS 95.42
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CSI 4.1rCSI 3.04%PRS 95.47
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CSI 3.88rCSI 5.57%PRS 92.58
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CSI 3.83rCSI 12.34%PRS 94.63
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CSI 3.71rCSI 5.07%PRS 93.23
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CSI 3.6rCSI 3.77%PRS 97.46
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CSI 3.5rCSI 6.06%PRS 94.91
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CSI 3.47rCSI 5.09%PRS 94.25
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CSI 3.46rCSI 7.65%PRS 91.8
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CSI 3.45rCSI 7.09%PRS 89.8
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CSI 3.16rCSI 8.18%PRS 95.93
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CSI 3.16rCSI 3.11%PRS 97.27
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CSI 2.99rCSI 7.41%PRS 98.01
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CSI 2.97rCSI 8.6%PRS 92.72
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CSI 2.94rCSI 16.61%PRS 91.03
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CSI 2.88rCSI 9.66%PRS 89.38
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CSI 2.85rCSI 7.32%PRS 94.61
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CSI 2.81rCSI 9.63%PRS 89.54
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CSI 2.7rCSI 6.3%PRS 96.83
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CSI 2.68rCSI 3.79%PRS 96.16
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CSI 2.65rCSI 6.32%PRS 96.78
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CSI 2.65rCSI 3.91%PRS 96.93
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CSI 2.59rCSI 7.14%PRS 96.39
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CSI 2.48rCSI 6.3%PRS 94.51
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CSI 2.01rCSI 48.09%PRS 89.25
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CSI 1.99rCSI 47.93%PRS 89.02
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CSI 1.9rCSI 2.59%PRS 94.04
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CSI 1.68rCSI 7.5%PRS 87.89
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CSI 1.55rCSI 13.34%PRS 92.59
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CSI 0.87rCSI 7.63%PRS 89.7
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CSI 0.7rCSI 4.37%PRS 93.44
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CSI 0.49rCSI 5.16%PRS 94.65
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Network Configuration
Explore relationships of the current gene. Select an Interaction Source: 'ONTOLOGY' for shared pathways (GO/Reactome) or 'STRING' for protein-protein interactions. Further refine by selecting context genes and comparing Cell Significance Index (CSI) scores between baseline and target cell types and their specific contexts.
Legend:
- Query Gene
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Node Color (Target Cell CSI, relative to current network):
- Very High
- High
- Medium
- Low
- Very Low
- CSI N/A
- Node Size: Proportional to Target Cell CSI magnitude
- STRING PPI Edge
- Shared Pathway Edge (ONTOLOGY)
Other Information
This section provides additional information about the gene, including a description generated by an AI language model and details about associated proteins.
Genular Protein ID: 2955861933
Symbol: SGSM1_HUMAN
Name: Small G protein signaling modulator 1
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 17509819
Title: Identification of three novel proteins (SGSM1, 2, 3) which modulate small G protein (RAP and RAB)-mediated signaling pathway.
PubMed ID: 17509819
PubMed ID: 19077034
Title: Identification and characterization of a novel Tre-2/Bub2/Cdc16 (TBC) protein that possesses Rab3A-GAP activity.
PubMed ID: 19077034
PubMed ID: 11853319
Title: Prediction of the coding sequences of unidentified human genes. XXII. The complete sequences of 50 new cDNA clones which code for large proteins.
PubMed ID: 11853319
PubMed ID: 10591208
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 22637480
Title: RUTBC2 protein, a Rab9A effector and GTPase-activating protein for Rab36.
PubMed ID: 22637480
Sequence Information:
- Length: 1148
- Mass: 129718
- Checksum: D619F453BA914376
- Sequence:
MASAPAEAET RQRLLRTVKK EVKQIMEEAV TRKFVHEDSS HIISFCAAVE ACVLHGLRRR AAGFLRSNKI AALFMKVGKN FPPAEDLSRK VQDLEQLIES ARNQIQGLQE NVRKLPKLPN LSPLAIKHLW IRTALFEKVL DKIVHYLVEN SSKYYEKEAL LMDPVDGPIL ASLLVGPCAL EYTKMKTADH FWTDPSADEL VQRHRIHSSH VRQDSPTKRP ALCIQKRHSS GSMDDRPSLS ARDYVESLHQ NSRATLLYGK NNVLVQPRDD MEAVPGYLSL HQTADVMTLK WTPNQLMNGS VGDLDYEKSV YWDYAMTIRL EEIVYLHCHQ QVDSGGTVVL VSQDGIQRPP FRFPKGGHLL QFLSCLENGL LPHGQLDPPL WSQRGKGKVF PKLRKRSPQG SAESTSSDKD DDEATDYVFR IIYPGMQSEF VAPDFLGSTS SVSVGPAWMM VPAGRSMLVV ARGSQWEPAR WDTTLPTPSP KEQPPMPQDL MDVSVSNLPS LWQPSPRKSS CSSCSQSGSA DGSSTNGCNH ERAPLKLLCD NMKYQILSRA FYGWLAYCRH LSTVRTHLSA LVNHMIVSPD LPCDAGQGLT ARIWEQYLHD STSYEEQELL RLIYYGGIQP EIRKAVWPFL LGHYQFGMTE TERKEVDEQI HACYAQTMAE WLGCEAIVRQ RERESHAAAL AKCSSGASLD SHLHRMLHRD STISNESSQS CSSGRQNIRL HSDSSSSTQV FESVDEVEQV EAEGRLEEKQ PKIPNGNLVN GTCSPDSGHP SSHNFSSGLS EHSEPSLSTE DSVLDAQRNT PTVLRPRDGS VDDRQSSEAT TSQDEAPREE LAVQDSLESD LLANESMDEF MSITGSLDMA LPEKDDVVME GWRSSETEKH GQADSEDNLS EEPEMESLFP ALASLAVTTS ANEVSPVSSS GVTYSPELLD LYTVNLHRIE KDVQRCDRNY WYFTPANLEK LRNIMCSYIW QHIEIGYVQG MCDLLAPLLV ILDDEALAFS CFTELMKRMN QNFPHGGAMD THFANMRSLI QILDSELFEL MHQNGDYTHF YFCYRWFLLD FKRELVYDDV FLVWETIWAA KHVSSAHYVL FIALALVEVY RDIILENNMD FTDIIKFFNE MAERHNTKQV LKLARDLVYK VQTLIENK
Genular Protein ID: 2401019418
Symbol: A0A087X241_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 10591208
PubMed ID: 11237011
Title: Initial sequencing and analysis of the human genome.
PubMed ID: 11237011
DOI: 10.1038/35057062
PubMed ID: 15496913
Title: Finishing the euchromatic sequence of the human genome.
PubMed ID: 15496913
DOI: 10.1038/nature03001
PubMed ID: 18477386
Title: Finishing the finished human chromosome 22 sequence.
PubMed ID: 18477386
Sequence Information:
- Length: 1087
- Mass: 122915
- Checksum: 43CB0383F90248F6
- Sequence:
MASAPAEAET RQRLLRTVKK EVKQIMEEAV TRKFVHEDSS HIISFCAAVE ACVLHGLRRR AAGFLRSNKI AALFMKVGKN FPPAEDLSRK VQDLEQLIES ARNQIQGLQE NVRKLPKLPN LSPLAIKHLW IRTALFEKVL DKIVHYLVEN SSKYYEKEAL LMDPVDGPIL ASLLVGPCAL EYTKMKTADH FWTDPSADEL VQRHRIHSSH VRQDSPTKRP ALCIQKRHSS GSMDDRPSLS ARDYVESLHQ NSRATLLYGK NNVLVQPRDD MEAVPGYLSL HQTADVMTLK WTPNQLMNGS VGDLDYEKSV YWDYAMTIRL EEIVYLHCHQ QVDSGGTVVL VSQDGIQRPP FRFPKGGHLL QFLSCLENGL LPHGQLDPPL WSQRGKGKVF PKLRKRSPQG SAESTSSDKD DDEATDYVFR IIYPGMQSEF VAPDFLGSTS SVSVGPAWMM VPAGRSMLVV ARGSQWEPAR WDTTLPTPSP KEQPPMPQDL MDVSVSNLPS LWQPSPRKSS CSSCSQSGSA DGSSTNGCNH ERAPLKLLCD NMKYQILSRA FYGWLAYCRH LSTVRTHLSA LVNHMIVSPD LPCDAGQGLT ARIWEQYLHD STSYEEQELL RLIYYGGIQP EIRKAVWPFL LGHYQFGMTE TERKESSQSC SSGRQNIRLH SDSSSSTQVF ESVDEVEQVE AEGRLEEKQP KIPNGNLVNG TCSPDSGHPS SHNFSSGLSE HSEPSLSTED SVLDAQRNTP TVLRPRDGSV DDRQSSEATT SQDEAPREEL AVQDSLESDL LANESMDEFM SITGSLDMAL PEKDDVVMEG WRSSETEKHG QADSEDNLSE EPEMESLFPA LASLAVTTSA NEVSPVSSSG VTYSPELLDL YTVNLHRIEK DVQRCDRNYW YFTPANLEKL RNIMCSYIWQ HIEIGYVQGM CDLLAPLLVI LDDEALAFSC FTELMKRMNQ NFPHGGAMDT HFANMRSLIQ ILDSELFELM HQNGDYTHFY FCYRWFLLDF KRELVYDDVF LVWETIWAAK HVSSAHYVLF IALALVEVYR DIILENNMDF TDIIKFFNEM AERHNTKQVL KLARDLVYKV QTLIENK