Details for: SDCBP

Gene ID: 6386

Symbol: SDCBP

Ensembl ID: ENSG00000137575

Description: syndecan binding protein

Associated with

Cells (max top 100)

(Marker Score score is uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)

  • Cell Name: fibroblast of mammary gland (CL0002555)
    Fold Change: 3.78
    Marker Score: 128699
  • Cell Name: myeloid leukocyte (CL0000766)
    Fold Change: 3.27
    Marker Score: 3949
  • Cell Name: CD14-positive, CD16-negative classical monocyte (CL0002057)
    Fold Change: 3.23
    Marker Score: 180897
  • Cell Name: granulocyte (CL0000094)
    Fold Change: 3.2
    Marker Score: 1433
  • Cell Name: lung macrophage (CL1001603)
    Fold Change: 3.15
    Marker Score: 3599.5
  • Cell Name: thyroid follicular cell (CL0002258)
    Fold Change: 3.1
    Marker Score: 2423
  • Cell Name: endothelial cell of uterus (CL0009095)
    Fold Change: 3.05
    Marker Score: 6092
  • Cell Name: basal cell of prostate epithelium (CL0002341)
    Fold Change: 2.94
    Marker Score: 7189.5
  • Cell Name: Kupffer cell (CL0000091)
    Fold Change: 2.94
    Marker Score: 2939.5
  • Cell Name: pulmonary artery endothelial cell (CL1001568)
    Fold Change: 2.92
    Marker Score: 2514
  • Cell Name: basophil (CL0000767)
    Fold Change: 2.87
    Marker Score: 1363
  • Cell Name: alveolar capillary type 1 endothelial cell (CL4028002)
    Fold Change: 2.85
    Marker Score: 7252
  • Cell Name: alveolar macrophage (CL0000583)
    Fold Change: 2.84
    Marker Score: 72676
  • Cell Name: foveolar cell of stomach (CL0002179)
    Fold Change: 2.83
    Marker Score: 18075
  • Cell Name: fibroblast of connective tissue of glandular part of prostate (CL1000305)
    Fold Change: 2.73
    Marker Score: 1137
  • Cell Name: vascular lymphangioblast (CL0005022)
    Fold Change: 2.69
    Marker Score: 4545
  • Cell Name: epithelial cell of urethra (CL1000296)
    Fold Change: 2.65
    Marker Score: 2086
  • Cell Name: reticular cell (CL0000432)
    Fold Change: 2.63
    Marker Score: 958
  • Cell Name: decidual cell (CL2000002)
    Fold Change: 2.62
    Marker Score: 11314
  • Cell Name: CD14-positive monocyte (CL0001054)
    Fold Change: 2.6
    Marker Score: 6481
  • Cell Name: fibroblast of breast (CL4006000)
    Fold Change: 2.56
    Marker Score: 1463
  • Cell Name: non-classical monocyte (CL0000875)
    Fold Change: 2.56
    Marker Score: 6179
  • Cell Name: fibroblast of connective tissue of nonglandular part of prostate (CL1000304)
    Fold Change: 2.55
    Marker Score: 2172
  • Cell Name: CD14-positive, CD16-positive monocyte (CL0002397)
    Fold Change: 2.55
    Marker Score: 4960
  • Cell Name: capillary endothelial cell (CL0002144)
    Fold Change: 2.54
    Marker Score: 2736
  • Cell Name: mesenchymal stem cell (CL0000134)
    Fold Change: 2.54
    Marker Score: 3914.5
  • Cell Name: mesodermal cell (CL0000222)
    Fold Change: 2.47
    Marker Score: 32578
  • Cell Name: prostate gland microvascular endothelial cell (CL2000059)
    Fold Change: 2.45
    Marker Score: 953
  • Cell Name: chondrocyte (CL0000138)
    Fold Change: 2.42
    Marker Score: 1089
  • Cell Name: lung secretory cell (CL1000272)
    Fold Change: 2.42
    Marker Score: 2157
  • Cell Name: endothelial cell (CL0000115)
    Fold Change: 2.41
    Marker Score: 2164
  • Cell Name: endothelial cell of vascular tree (CL0002139)
    Fold Change: 2.41
    Marker Score: 3496.5
  • Cell Name: mucous neck cell (CL0000651)
    Fold Change: 2.4
    Marker Score: 5438
  • Cell Name: alveolar capillary type 2 endothelial cell (CL4028003)
    Fold Change: 2.4
    Marker Score: 3467
  • Cell Name: cell in vitro (CL0001034)
    Fold Change: 2.38
    Marker Score: 82484
  • Cell Name: fibroblast of connective tissue of prostate (CL1000299)
    Fold Change: 2.37
    Marker Score: 591
  • Cell Name: prostate stromal cell (CL0002622)
    Fold Change: 2.35
    Marker Score: 591
  • Cell Name: neutrophil (CL0000775)
    Fold Change: 2.35
    Marker Score: 1433
  • Cell Name: skeletal muscle satellite stem cell (CL0008011)
    Fold Change: 2.32
    Marker Score: 2481
  • Cell Name: elicited macrophage (CL0000861)
    Fold Change: 2.31
    Marker Score: 14008
  • Cell Name: eurydendroid cell (CL0000253)
    Fold Change: 2.27
    Marker Score: 925
  • Cell Name: type I pneumocyte (CL0002062)
    Fold Change: 2.26
    Marker Score: 2728
  • Cell Name: theca cell (CL0000503)
    Fold Change: 2.26
    Marker Score: 1618
  • Cell Name: fibroblast of lung (CL0002553)
    Fold Change: 2.25
    Marker Score: 5895
  • Cell Name: Hofbauer cell (CL3000001)
    Fold Change: 2.24
    Marker Score: 1236
  • Cell Name: stem cell of epidermis (CL1000428)
    Fold Change: 2.24
    Marker Score: 759.5
  • Cell Name: blood cell (CL0000081)
    Fold Change: 2.23
    Marker Score: 25902.5
  • Cell Name: inflammatory cell (CL0009002)
    Fold Change: 2.22
    Marker Score: 957
  • Cell Name: lung endothelial cell (CL1001567)
    Fold Change: 2.2
    Marker Score: 19343
  • Cell Name: serous secreting cell (CL0000313)
    Fold Change: 2.2
    Marker Score: 878
  • Cell Name: vein endothelial cell (CL0002543)
    Fold Change: 2.2
    Marker Score: 1986
  • Cell Name: cerebral cortex endothelial cell (CL1001602)
    Fold Change: 2.18
    Marker Score: 1300
  • Cell Name: luminal epithelial cell of mammary gland (CL0002326)
    Fold Change: 2.17
    Marker Score: 3853
  • Cell Name: squamous epithelial cell (CL0000076)
    Fold Change: 2.16
    Marker Score: 1472
  • Cell Name: kidney loop of Henle epithelial cell (CL1000909)
    Fold Change: 2.16
    Marker Score: 1351
  • Cell Name: kidney collecting duct principal cell (CL1001431)
    Fold Change: 2.15
    Marker Score: 5433
  • Cell Name: hematopoietic cell (CL0000988)
    Fold Change: 2.15
    Marker Score: 1430
  • Cell Name: epithelial cell (CL0000066)
    Fold Change: 2.15
    Marker Score: 3412
  • Cell Name: conjunctival epithelial cell (CL1000432)
    Fold Change: 2.13
    Marker Score: 2246
  • Cell Name: myofibroblast cell (CL0000186)
    Fold Change: 2.13
    Marker Score: 2627
  • Cell Name: stromal cell (CL0000499)
    Fold Change: 2.12
    Marker Score: 2489
  • Cell Name: placental villous trophoblast (CL2000060)
    Fold Change: 2.12
    Marker Score: 8348
  • Cell Name: pigmented epithelial cell (CL0000529)
    Fold Change: 2.12
    Marker Score: 8876.5
  • Cell Name: myelocyte (CL0002193)
    Fold Change: 2.12
    Marker Score: 914
  • Cell Name: CD1c-positive myeloid dendritic cell (CL0002399)
    Fold Change: 2.11
    Marker Score: 5455
  • Cell Name: melanocyte (CL0000148)
    Fold Change: 2.1
    Marker Score: 852
  • Cell Name: skeletal muscle satellite cell (CL0000594)
    Fold Change: 2.09
    Marker Score: 1397
  • Cell Name: acinar cell of salivary gland (CL0002623)
    Fold Change: 2.07
    Marker Score: 4708
  • Cell Name: kidney loop of Henle thin ascending limb epithelial cell (CL1001107)
    Fold Change: 2.06
    Marker Score: 2090
  • Cell Name: microfold cell of epithelium of small intestine (CL1000353)
    Fold Change: 2.06
    Marker Score: 491
  • Cell Name: alternatively activated macrophage (CL0000890)
    Fold Change: 2.05
    Marker Score: 855
  • Cell Name: adventitial cell (CL0002503)
    Fold Change: 2.04
    Marker Score: 503
  • Cell Name: DN3 thymocyte (CL0000807)
    Fold Change: 2.04
    Marker Score: 1017
  • Cell Name: fibroblast (CL0000057)
    Fold Change: 2.03
    Marker Score: 1957
  • Cell Name: CD8-alpha-alpha-positive, alpha-beta intraepithelial T cell (CL0000915)
    Fold Change: 2.01
    Marker Score: 2841.5
  • Cell Name: classical monocyte (CL0000860)
    Fold Change: 2
    Marker Score: 8320
  • Cell Name: supporting cell (CL0000630)
    Fold Change: 1.99
    Marker Score: 3739
  • Cell Name: CD4-positive helper T cell (CL0000492)
    Fold Change: 1.98
    Marker Score: 2156
  • Cell Name: mammary gland epithelial cell (CL0002327)
    Fold Change: 1.98
    Marker Score: 702
  • Cell Name: endothelial cell of lymphatic vessel (CL0002138)
    Fold Change: 1.97
    Marker Score: 1231
  • Cell Name: effector CD8-positive, alpha-beta T cell (CL0001050)
    Fold Change: 1.97
    Marker Score: 1658
  • Cell Name: glandular cell of esophagus (CL0002657)
    Fold Change: 1.97
    Marker Score: 623
  • Cell Name: enteric smooth muscle cell (CL0002504)
    Fold Change: 1.96
    Marker Score: 4623.5
  • Cell Name: endothelial cell of artery (CL1000413)
    Fold Change: 1.96
    Marker Score: 813
  • Cell Name: bladder urothelial cell (CL1001428)
    Fold Change: 1.96
    Marker Score: 2886
  • Cell Name: memory T cell (CL0000813)
    Fold Change: 1.95
    Marker Score: 838
  • Cell Name: decidual natural killer cell, human (CL0002343)
    Fold Change: 1.95
    Marker Score: 5384
  • Cell Name: activated CD4-positive, alpha-beta T cell, human (CL0001043)
    Fold Change: 1.94
    Marker Score: 880
  • Cell Name: lung microvascular endothelial cell (CL2000016)
    Fold Change: 1.93
    Marker Score: 410
  • Cell Name: alpha-beta T cell (CL0000789)
    Fold Change: 1.92
    Marker Score: 1456
  • Cell Name: peritubular capillary endothelial cell (CL1001033)
    Fold Change: 1.92
    Marker Score: 447
  • Cell Name: microglial cell (CL0000129)
    Fold Change: 1.92
    Marker Score: 3500
  • Cell Name: endothelial cell of sinusoid (CL0002262)
    Fold Change: 1.91
    Marker Score: 463
  • Cell Name: club cell (CL0000158)
    Fold Change: 1.91
    Marker Score: 2227
  • Cell Name: secretory cell (CL0000151)
    Fold Change: 1.9
    Marker Score: 3460
  • Cell Name: tracheobronchial serous cell (CL0019001)
    Fold Change: 1.89
    Marker Score: 690
  • Cell Name: keratocyte (CL0002363)
    Fold Change: 1.88
    Marker Score: 433
  • Cell Name: exhausted T cell (CL0011025)
    Fold Change: 1.88
    Marker Score: 1081
  • Cell Name: kidney epithelial cell (CL0002518)
    Fold Change: 1.87
    Marker Score: 1983
  • Cell Name: pancreatic stellate cell (CL0002410)
    Fold Change: 1.87
    Marker Score: 1182

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Other Information

**Key Characteristics:** SDCBP is a protein-coding gene that belongs to the syndecan family, which is characterized by its ability to bind to syndecans, a class of transmembrane heparan sulfate proteoglycans. The gene is primarily expressed in cells that require cell-to-cell communication and interaction, such as fibroblasts, myeloid leukocytes, and endothelial cells. SDCBP is also known to interact with various signaling molecules, including receptors, kinases, and transcription factors, which further underscores its role in regulating cellular processes. **Pathways and Functions:** SDCBP is involved in multiple signaling pathways, including: 1. **Actin Cytoskeleton Organization:** SDCBP regulates the organization of the actin cytoskeleton, which is essential for cell migration, adhesion, and shape changes. 2. **Adherens Junctions:** SDCBP interacts with adherens junction proteins, such as cadherins, to maintain cell-to-cell adhesion and tissue integrity. 3. **Axon Guidance:** SDCBP plays a role in the regulation of axon growth and guidance during neural development. 4. **Immune System:** SDCBP is expressed in myeloid leukocytes and regulates immune responses, including phagocytosis and cytokine production. 5. **Neurological Development:** SDCBP is involved in the regulation of neuronal development, including axon guidance and synapse formation. SDCBP also regulates various cellular processes, including: 1. **Cell Migration:** SDCBP promotes cell migration by regulating the organization of the actin cytoskeleton and adhesion molecules. 2. **Cell Growth:** SDCBP regulates cell growth and proliferation by modulating signaling pathways, including the PI3K/AKT and MAPK/ERK pathways. 3. **Exosome Secretion:** SDCBP promotes the secretion of exosomes, which are small vesicles that contain proteins, lipids, and RNA molecules. **Clinical Significance:** SDCBP has been implicated in various diseases, including: 1. **Cancer:** SDCBP overexpression has been observed in various types of cancer, including breast, lung, and colon cancer. 2. **Neurological Disorders:** SDCBP has been linked to neurological disorders, such as Alzheimer's disease, Parkinson's disease, and multiple sclerosis. 3. **Inflammatory Diseases:** SDCBP plays a role in the regulation of immune responses and has been implicated in inflammatory diseases, such as atherosclerosis and rheumatoid arthritis. In conclusion, the syndecan binding protein (SDCBP) is a multifaceted gene that plays a critical role in various cellular processes, including cell adhesion, migration, and signaling. Its significance in human biology is underscored by its broad expression in various cell types and its involvement in multiple signaling pathways. Further research is needed to fully understand the functions of SDCBP and its role in human disease.

Genular Protein ID: 4139229000

Symbol: SDCB1_HUMAN

Name: Syntenin-1

UniProtKB Accession Codes:

O00560 B2R5Q7 B4DUH3 B7ZLN2 O00173 O43391 Q14CP2

Database IDs:

AGR 1 AlphaFoldDB 1 Antibodypedia 1 Bgee 1 BindingDB 1 BioGRID 1 BioGRID-ORCS 1 BioMuta 1 CCDS 3 CDD 1 ChEBI 2 ChEMBL 1 ChiTaRS 1 ComplexPortal 1 DIP 1 DNASU 1 DisGeNET 1 EMBL 11 EPD 1 Ensembl 4 EvolutionaryTrace 1 ExpressionAtlas 1 GO 55 Gene3D 1 GeneCards 1 GeneTree 1 GeneWiki 1 Genevisible 1 GenomeRNAi 1 GlyGen 1 HGNC 1 HPA 1 InParanoid 1 IntAct 1 InterPro 2 MANE-Select 1 MIM 1 MINT 1 MassIVE 1 MaxQB 1 MoonDB 1 NCBI Taxonomy 1 OMA 1 OpenTargets 1 OrthoDB 1 PANTHER 2 PDB 59 PDBsum 54 PIR 1 PRO 1 PROSITE 1 PROSITE-ProRule 1 PathwayCommons 1 PaxDb 1 PeptideAtlas 1 Pfam 1 PharmGKB 1 Pharos 1 PhosphoSitePlus 1 PhylomeDB 1 Proteomes 1 ProteomicsDB 3 Pumba 1 RNAct 1 Reactome 5 RefSeq 5 SIGNOR 1 SMART 1 SMR 1 STRING 1 SUPFAM 1 SignaLink 1 SwissPalm 1 TCDB 1 TopDownProteomics 1 TreeFam 1 UCSC 1 UniProtKB 2 VEuPathDB 1 eggNOG 1 iPTMnet 1 jPOST 1 neXtProt 1

Citations:

PubMed ID: 9391086

Title: Syntenin, a PDZ protein that binds syndecan cytoplasmic domains.

PubMed ID: 9391086

DOI: 10.1073/pnas.94.25.13683

PubMed ID: 9511750

Title: Melanoma differentiation associated gene-9, mda-9, is a human gamma interferon responsive gene.

PubMed ID: 9511750

DOI: 10.1016/s0378-1119(97)00562-3

PubMed ID: 14702039

Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.

PubMed ID: 14702039

DOI: 10.1038/ng1285

PubMed ID: 16421571

Title: DNA sequence and analysis of human chromosome 8.

PubMed ID: 16421571

DOI: 10.1038/nature04406

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 9883737

Title: PDZ proteins bind, cluster, and synaptically colocalize with Eph receptors and their ephrin ligands.

PubMed ID: 9883737

DOI: 10.1016/s0896-6273(00)80663-7

PubMed ID: 10230395

Title: A role for a PDZ protein in the early secretory pathway for the targeting of proTGF-alpha to the cell surface.

PubMed ID: 10230395

DOI: 10.1016/s1097-2765(00)80470-0

PubMed ID: 10770943

Title: Syntenin-syndecan binding requires syndecan-synteny and the co-operation of both PDZ domains of syntenin.

PubMed ID: 10770943

DOI: 10.1074/jbc.m002459200

PubMed ID: 11152476

Title: The neural cell recognition molecule neurofascin interacts with syntenin-1 but not with syntenin-2, both of which reveal self-associating activity.

PubMed ID: 11152476

DOI: 10.1074/jbc.m010647200

PubMed ID: 11432873

Title: Schwannomin isoform-1 interacts with syntenin via PDZ domains.

PubMed ID: 11432873

DOI: 10.1074/jbc.m105792200

PubMed ID: 11179419

Title: Characterization of syntenin, a syndecan-binding PDZ protein, as a component of cell adhesion sites and microfilaments.

PubMed ID: 11179419

DOI: 10.1091/mbc.12.2.339

PubMed ID: 11498591

Title: Cytokine-specific transcriptional regulation through an IL-5Ralpha interacting protein.

PubMed ID: 11498591

DOI: 10.1126/science.1059157

PubMed ID: 12643545

Title: Proteomic analysis of early melanosomes: identification of novel melanosomal proteins.

PubMed ID: 12643545

DOI: 10.1021/pr025562r

PubMed ID: 17081065

Title: Proteomic and bioinformatic characterization of the biogenesis and function of melanosomes.

PubMed ID: 17081065

DOI: 10.1021/pr060363j

PubMed ID: 19413330

Title: Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach.

PubMed ID: 19413330

DOI: 10.1021/ac9004309

PubMed ID: 21269460

Title: Initial characterization of the human central proteome.

PubMed ID: 21269460

DOI: 10.1186/1752-0509-5-17

PubMed ID: 22660413

Title: Syndecan-syntenin-ALIX regulates the biogenesis of exosomes.

PubMed ID: 22660413

DOI: 10.1038/ncb2502

PubMed ID: 23186163

Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.

PubMed ID: 23186163

DOI: 10.1021/pr300630k

PubMed ID: 24275569

Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.

PubMed ID: 24275569

DOI: 10.1016/j.jprot.2013.11.014

PubMed ID: 26032692

Title: Syntenin and syndecan in the biogenesis of exosomes.

PubMed ID: 26032692

DOI: 10.1111/boc.201500010

PubMed ID: 25219541

Title: Targeting tumor invasion: the roles of MDA-9/Syntenin.

PubMed ID: 25219541

DOI: 10.1517/14728222.2014.959495

PubMed ID: 26539120

Title: Syntenin controls migration, growth, proliferation, and cell cycle progression in cancer cells.

PubMed ID: 26539120

DOI: 10.3389/fphar.2015.00241

PubMed ID: 25893292

Title: Syntenin regulates TGF-beta1-induced Smad activation and the epithelial-to-mesenchymal transition by inhibiting caveolin-mediated TGF-beta type I receptor internalization.

PubMed ID: 25893292

DOI: 10.1038/onc.2015.100

PubMed ID: 26291527

Title: MDA-9/syntenin control.

PubMed ID: 26291527

DOI: 10.1002/jcp.25136

PubMed ID: 12679023

Title: PDZ tandem of human syntenin: crystal structure and functional properties.

PubMed ID: 12679023

DOI: 10.1016/s0969-2126(03)00052-2

PubMed ID: 12842047

Title: Molecular roots of degenerate specificity in syntenin's PDZ2 domain: reassessment of the PDZ recognition paradigm.

PubMed ID: 12842047

DOI: 10.1016/s0969-2126(03)00125-4

PubMed ID: 15081807

Title: The PDZ2 domain of syntenin at ultra-high resolution: bridging the gap between macromolecular and small molecule crystallography.

PubMed ID: 15081807

DOI: 10.1016/j.jmb.2004.02.057

PubMed ID: 16533050

Title: The binding of the PDZ tandem of syntenin to target proteins.

PubMed ID: 16533050

DOI: 10.1021/bi052225y

PubMed ID: 27386966

Title: Frizzled 7 and PIP2 binding by syntenin PDZ2 domain supports Frizzled 7 trafficking and signalling.

PubMed ID: 27386966

DOI: 10.1038/ncomms12101

Sequence Information:

  • Length: 298
  • Mass: 32444
  • Checksum: 574E1349F86F949F
  • Sequence:
    • MSLYPSLEDL KVDKVIQAQT AFSANPANPA ILSEASAPIP HDGNLYPRLY PELSQYMGLS 
LNEEEIRANV AVVSGAPLQG QLVARPSSIN YMVAPVTGND VGIRRAEIKQ GIREVILCKD 
QDGKIGLRLK SIDNGIFVQL VQANSPASLV GLRFGDQVLQ INGENCAGWS SDKAHKVLKQ 
AFGEKITMTI RDRPFERTIT MHKDSTGHVG FIFKNGKITS IVKDSSAARN GLLTEHNICE 
INGQNVIGLK DSQIADILST SGTVVTITIM PAFIFEHIIK RMAPSIMKSL MDHTIPEV

Genular Protein ID: 3473848320

Symbol: G5EA09_HUMAN

Name: N/A

UniProtKB Accession Codes:

G5EA09

Database IDs:

Antibodypedia 1 Bgee 1 BioGRID-ORCS 1 CDD 1 ChiTaRS 1 DNASU 1 EMBL 3 EPD 1 Ensembl 3 GO 4 Gene3D 1 GeneTree 1 GenomeRNAi 1 HGNC 1 InterPro 2 MassIVE 1 MaxQB 1 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PROSITE 2 Pfam 1 Proteomes 2 ProteomicsDB 1 RefSeq 1 SAM 1 SMART 1 SUPFAM 1 UCSC 1 VEuPathDB 1

Citations:

PubMed ID: 11181995

Title: The sequence of the human genome.

PubMed ID: 11181995

DOI: 10.1126/science.1058040

PubMed ID: 16421571

Title: DNA sequence and analysis of human chromosome 8.

PubMed ID: 16421571

DOI: 10.1038/nature04406

PubMed ID: 19413330

Title: Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach.

PubMed ID: 19413330

DOI: 10.1021/ac9004309

PubMed ID: 21269460

Title: Initial characterization of the human central proteome.

PubMed ID: 21269460

DOI: 10.1186/1752-0509-5-17

PubMed ID: 23186163

Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.

PubMed ID: 23186163

PubMed ID: 24275569

Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.

PubMed ID: 24275569

DOI: 10.1016/j.jprot.2013.11.014

Sequence Information:

  • Length: 318
  • Mass: 34819
  • Checksum: DEA5027C28090AFB
  • Sequence:
    • MIKLWTNRDL HIIVMVKNPA KMSLYPSLED LKVDKVIQAQ TAFSANPANP AILSEASAPI 
PHDGNLYPRL YPELSQYMGL SLNEEEIRAN VAVVSGAPLQ GLVARPSSIN YMVAPVTGND 
VGIRRAEIKQ GIREVILCKD QDGKIGLRLK SIDNGIFVQL VQANSPASLV GLRFGDQVLQ 
INGENCAGWS SDKAHKVLKQ AFGEKITMTI RDRPFERTIT MHKDSTGHVG FIFKNGKITS 
IVKDSSAARN GLLTEHNICE INGQNVIGLK DSQIADILST SGTVVTITIM PAFIFEHIIK 
RMAPSIMKSL MDHTIPEV

Genular Protein ID: 1783094541

Symbol: B4DHN5_HUMAN

Name: N/A

UniProtKB Accession Codes:

B4DHN5

Database IDs:

Antibodypedia 1 Bgee 1 BioGRID-ORCS 1 CDD 2 ChiTaRS 1 DNASU 1 EMBL 3 EPD 1 Ensembl 2 GO 2 Gene3D 1 GeneTree 1 GenomeRNAi 1 HGNC 1 InterPro 3 MassIVE 1 MaxQB 1 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PROSITE 2 Pfam 2 Proteomes 2 ProteomicsDB 1 RefSeq 1 SAM 1 SMART 1 SUPFAM 1 UCSC 1 VEuPathDB 1

Citations:

PubMed ID: 16421571

Title: DNA sequence and analysis of human chromosome 8.

PubMed ID: 16421571

DOI: 10.1038/nature04406

PubMed ID: 19413330

Title: Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach.

PubMed ID: 19413330

DOI: 10.1021/ac9004309

PubMed ID: 21269460

Title: Initial characterization of the human central proteome.

PubMed ID: 21269460

DOI: 10.1186/1752-0509-5-17

PubMed ID: 23186163

Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.

PubMed ID: 23186163

PubMed ID: 24275569

Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.

PubMed ID: 24275569

DOI: 10.1016/j.jprot.2013.11.014

Sequence Information:

  • Length: 239
  • Mass: 25968
  • Checksum: C8ECBFCEDF02B3A7
  • Sequence:
    • MSLYPSLEDL KVDKVIQAQT AFSANPANPA ILSEASAPIP HDGNLYPRLY PELSQYMGLS 
LNEEEIRANV AVVSGAPLQG LVQANSPASL VGLRFGDQVL QINGENCAGW SSDKAHKVLK 
QAFGEKITMT IRDRPFERTI TMHKDSTGHV GFIFKNGKIT SIVKDSSAAR NGLLTEHNIC 
EINGQNVIGL KDSQIADILS TSGTVVTITI MPAFIFEHII KRMAPSIMKS LMDHTIPEV

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. For the full schema, download it here.