Details for: LSS
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: polychromatophilic erythroblast (CL0000550)
Fold Change: 173.9687
Cell Significance Index: -27.0600 - Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
Fold Change: 106.8035
Cell Significance Index: -27.0900 - Cell Name: smooth muscle fiber of ileum (CL1000278)
Fold Change: 53.7572
Cell Significance Index: -25.3800 - Cell Name: orthochromatic erythroblast (CL0000552)
Fold Change: 22.1135
Cell Significance Index: -27.2700 - Cell Name: ciliated cell of the bronchus (CL0002332)
Fold Change: 21.9536
Cell Significance Index: -20.9600 - Cell Name: CD8-alpha-beta-positive, alpha-beta intraepithelial T cell (CL0000796)
Fold Change: 8.9721
Cell Significance Index: -24.0400 - Cell Name: obsolete epithelial cell of alveolus of lung (CL0010003)
Fold Change: 7.8092
Cell Significance Index: 194.7400 - Cell Name: stromal cell of bone marrow (CL0010001)
Fold Change: 6.9867
Cell Significance Index: -27.5700 - Cell Name: epidermal Langerhans cell (CL0002457)
Fold Change: 6.0953
Cell Significance Index: -13.3400 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: 3.5484
Cell Significance Index: 95.0800 - Cell Name: enteroendocrine cell of colon (CL0009042)
Fold Change: 1.7746
Cell Significance Index: 337.7200 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 1.2899
Cell Significance Index: 255.9900 - Cell Name: colon goblet cell (CL0009039)
Fold Change: 0.9574
Cell Significance Index: 94.7100 - Cell Name: midget ganglion cell of retina (CL4023188)
Fold Change: 0.8534
Cell Significance Index: 8.8900 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 0.7840
Cell Significance Index: 157.2700 - Cell Name: retinal ganglion cell (CL0000740)
Fold Change: 0.7687
Cell Significance Index: 6.3500 - Cell Name: GABAergic amacrine cell (CL4030027)
Fold Change: 0.7554
Cell Significance Index: 9.3700 - Cell Name: fibroblast of mammary gland (CL0002555)
Fold Change: 0.7312
Cell Significance Index: 20.9600 - Cell Name: direct pathway medium spiny neuron (CL4023026)
Fold Change: 0.7130
Cell Significance Index: 27.0000 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: 0.6938
Cell Significance Index: 19.3900 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 0.6804
Cell Significance Index: 244.0600 - Cell Name: gut absorptive cell (CL0000677)
Fold Change: 0.6406
Cell Significance Index: 38.4600 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 0.6027
Cell Significance Index: 65.5600 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: 0.5720
Cell Significance Index: 25.3000 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: 0.5502
Cell Significance Index: 24.9400 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 0.5361
Cell Significance Index: 87.2000 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: 0.5092
Cell Significance Index: 14.6700 - Cell Name: paneth cell of epithelium of small intestine (CL1000343)
Fold Change: 0.4403
Cell Significance Index: 9.5400 - Cell Name: OFF midget ganglion cell (CL4033047)
Fold Change: 0.4018
Cell Significance Index: 5.0100 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: 0.3044
Cell Significance Index: 54.8800 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: 0.3042
Cell Significance Index: 413.6700 - Cell Name: microfold cell of epithelium of small intestine (CL1000353)
Fold Change: 0.3022
Cell Significance Index: 20.9000 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: 0.2913
Cell Significance Index: 22.3600 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: 0.2405
Cell Significance Index: 452.9200 - Cell Name: enteroendocrine cell of small intestine (CL0009006)
Fold Change: 0.2372
Cell Significance Index: 5.9300 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: 0.2250
Cell Significance Index: 10.5800 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: 0.1777
Cell Significance Index: 9.9700 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: 0.1775
Cell Significance Index: 24.3700 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: 0.1736
Cell Significance Index: 267.2600 - Cell Name: cell in vitro (CL0001034)
Fold Change: 0.1706
Cell Significance Index: 93.1600 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 0.1558
Cell Significance Index: 140.6400 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: 0.1418
Cell Significance Index: 17.4300 - Cell Name: hair follicular keratinocyte (CL2000092)
Fold Change: 0.1249
Cell Significance Index: 55.2400 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: 0.1145
Cell Significance Index: 72.7200 - Cell Name: anterior lens cell (CL0002223)
Fold Change: 0.1036
Cell Significance Index: 190.9800 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: 0.0858
Cell Significance Index: 3.0200 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: 0.0845
Cell Significance Index: 5.1900 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: 0.0643
Cell Significance Index: 3.3400 - Cell Name: ON midget ganglion cell (CL4033046)
Fold Change: 0.0547
Cell Significance Index: 0.6900 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: 0.0341
Cell Significance Index: 5.8200 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: 0.0240
Cell Significance Index: 1.1200 - Cell Name: cerebellar granule cell (CL0001031)
Fold Change: 0.0239
Cell Significance Index: 0.4100 - Cell Name: preadipocyte (CL0002334)
Fold Change: 0.0210
Cell Significance Index: 0.4100 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: 0.0089
Cell Significance Index: 6.7100 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: 0.0003
Cell Significance Index: 0.1100 - Cell Name: pancreatic PP cell (CL0002275)
Fold Change: -0.0087
Cell Significance Index: -5.4100 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: -0.0112
Cell Significance Index: -1.6300 - Cell Name: odontoblast (CL0000060)
Fold Change: -0.0123
Cell Significance Index: -1.5800 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0134
Cell Significance Index: -9.9500 - Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
Fold Change: -0.0210
Cell Significance Index: -15.4200 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0233
Cell Significance Index: -13.1300 - Cell Name: cardiac endothelial cell (CL0010008)
Fold Change: -0.0591
Cell Significance Index: -0.8500 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.0605
Cell Significance Index: -12.7400 - Cell Name: epithelial cell of stomach (CL0002178)
Fold Change: -0.0651
Cell Significance Index: -7.5900 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.0677
Cell Significance Index: -19.4900 - Cell Name: lactocyte (CL0002325)
Fold Change: -0.0788
Cell Significance Index: -10.1800 - Cell Name: tonsil germinal center B cell (CL2000006)
Fold Change: -0.0800
Cell Significance Index: -9.4400 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.0912
Cell Significance Index: -10.4500 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.1043
Cell Significance Index: -10.6600 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: -0.1086
Cell Significance Index: -2.9000 - Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
Fold Change: -0.1133
Cell Significance Index: -2.4100 - Cell Name: sebum secreting cell (CL0000317)
Fold Change: -0.1213
Cell Significance Index: -8.5800 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: -0.1319
Cell Significance Index: -1.8000 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: -0.1324
Cell Significance Index: -6.9500 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: -0.1325
Cell Significance Index: -8.9100 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: -0.1403
Cell Significance Index: -8.8400 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: -0.1760
Cell Significance Index: -13.1200 - Cell Name: skeletal muscle fiber (CL0008002)
Fold Change: -0.1895
Cell Significance Index: -4.8700 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: -0.1959
Cell Significance Index: -20.4000 - Cell Name: pancreatic endocrine cell (CL0008024)
Fold Change: -0.2105
Cell Significance Index: -24.0300 - Cell Name: early pro-B cell (CL0002046)
Fold Change: -0.2342
Cell Significance Index: -15.1100 - Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
Fold Change: -0.2587
Cell Significance Index: -8.9900 - Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
Fold Change: -0.2604
Cell Significance Index: -20.6200 - Cell Name: cortical interneuron (CL0008031)
Fold Change: -0.2656
Cell Significance Index: -6.3700 - Cell Name: transit amplifying cell of colon (CL0009011)
Fold Change: -0.2719
Cell Significance Index: -8.7100 - Cell Name: mesenchymal cell (CL0008019)
Fold Change: -0.3017
Cell Significance Index: -5.0500 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: -0.3363
Cell Significance Index: -20.6200 - Cell Name: granulosa cell (CL0000501)
Fold Change: -0.3409
Cell Significance Index: -8.9700 - Cell Name: centrilobular region hepatocyte (CL0019029)
Fold Change: -0.3482
Cell Significance Index: -5.8700 - Cell Name: Purkinje cell (CL0000121)
Fold Change: -0.3569
Cell Significance Index: -7.8200 - Cell Name: lung endothelial cell (CL1001567)
Fold Change: -0.3870
Cell Significance Index: -20.1600 - Cell Name: hippocampal astrocyte (CL0002604)
Fold Change: -0.3983
Cell Significance Index: -5.5700 - Cell Name: basal cell of prostate epithelium (CL0002341)
Fold Change: -0.4071
Cell Significance Index: -11.0800 - Cell Name: hippocampal pyramidal neuron (CL1001571)
Fold Change: -0.4433
Cell Significance Index: -12.6500 - Cell Name: fibroblast of dermis (CL0002551)
Fold Change: -0.4562
Cell Significance Index: -9.5500 - Cell Name: cardiac muscle cell (CL0000746)
Fold Change: -0.4626
Cell Significance Index: -6.8300 - Cell Name: umbrella cell of urothelium (CL4030056)
Fold Change: -0.4762
Cell Significance Index: -4.3900 - Cell Name: CD4-positive, alpha-beta memory T cell, CD45RO-positive (CL0001204)
Fold Change: -0.4818
Cell Significance Index: -14.1500 - Cell Name: periportal region hepatocyte (CL0019026)
Fold Change: -0.4868
Cell Significance Index: -7.1900 - Cell Name: type I muscle cell (CL0002211)
Fold Change: -0.4976
Cell Significance Index: -12.1400
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 1753128708
Symbol: LSS_HUMAN
Name: Lanosterol synthase
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 7639730
Title: Molecular cloning of the human gene encoding lanosterol synthase from a liver cDNA library.
PubMed ID: 7639730
PubMed ID: 8593458
Title: Molecular cloning of cDNA encoding human lanosterol synthase.
PubMed ID: 8593458
DOI: 10.1248/bpb.18.1459
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 10598817
Title: Structure of the human lanosterol synthase gene and its analysis as a candidate for holoprosencephaly.
PubMed ID: 10598817
PubMed ID: 10830953
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 14766201
Title: The monotopic membrane protein human oxidosqualene cyclase is active as monomer.
PubMed ID: 14766201
PubMed ID: 8655142
Title: The human lanosterol synthase gene maps to chromosome 21q22.3.
PubMed ID: 8655142
DOI: 10.1007/bf02281872
PubMed ID: 21269460
Title: Initial characterization of the human central proteome.
PubMed ID: 21269460
PubMed ID: 22814378
Title: N-terminal acetylome analyses and functional insights of the N-terminal acetyltransferase NatB.
PubMed ID: 22814378
PubMed ID: 24275569
Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.
PubMed ID: 24275569
PubMed ID: 26200341
Title: Lanosterol reverses protein aggregation in cataracts.
PubMed ID: 26200341
DOI: 10.1038/nature14650
PubMed ID: 25944712
Title: N-terminome analysis of the human mitochondrial proteome.
PubMed ID: 25944712
PubMed ID: 29016354
Title: Congenital cataract with LSS gene mutations: a new case report.
PubMed ID: 29016354
PubMed ID: 30401459
Title: Bi-allelic mutations in LSS, encoding lanosterol synthase, cause autosomal-recessive hypotrichosis simplex.
PubMed ID: 30401459
PubMed ID: 30723320
Title: Biallelic pathogenic variants in the lanosterol synthase gene LSS involved in the cholesterol biosynthesis cause alopecia with intellectual disability, a rare recessive neuroectodermal syndrome.
PubMed ID: 30723320
PubMed ID: 15525992
Title: Insight into steroid scaffold formation from the structure of human oxidosqualene cyclase.
PubMed ID: 15525992
DOI: 10.1038/nature02993
Sequence Information:
- Length: 732
- Mass: 83309
- Checksum: E4708A5AE53585ED
- Sequence:
MTEGTCLRRR GGPYKTEPAT DLGRWRLNCE RGRQTWTYLQ DERAGREQTG LEAYALGLDT KNYFKDLPKA HTAFEGALNG MTFYVGLQAE DGHWTGDYGG PLFLLPGLLI TCHVARIPLP AGYREEIVRY LRSVQLPDGG WGLHIEDKST VFGTALNYVS LRILGVGPDD PDLVRARNIL HKKGGAVAIP SWGKFWLAVL NVYSWEGLNT LFPEMWLFPD WAPAHPSTLW CHCRQVYLPM SYCYAVRLSA AEDPLVQSLR QELYVEDFAS IDWLAQRNNV APDELYTPHS WLLRVVYALL NLYEHHHSAH LRQRAVQKLY EHIVADDRFT KSISIGPISK TINMLVRWYV DGPASTAFQE HVSRIPDYLW MGLDGMKMQG TNGSQIWDTA FAIQALLEAG GHHRPEFSSC LQKAHEFLRL SQVPDNPPDY QKYYRQMRKG GFSFSTLDCG WIVSDCTAEA LKAVLLLQEK CPHVTEHIPR ERLCDAVAVL LNMRNPDGGF ATYETKRGGH LLELLNPSEV FGDIMIDYTY VECTSAVMQA LKYFHKRFPE HRAAEIRETL TQGLEFCRRQ QRADGSWEGS WGVCFTYGTW FGLEAFACMG QTYRDGTACA EVSRACDFLL SRQMADGGWG EDFESCEERR YLQSAQSQIH NTCWAMMGLM AVRHPDIEAQ ERGVRCLLEK QLPNGDWPQE NIAGVFNKSC AISYTSYRNI FPIWALGRFS QLYPERALAG HP
Genular Protein ID: 3474049963
Symbol: B2R694_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Sequence Information:
- Length: 732
- Mass: 83424
- Checksum: 19279807FC7334F6
- Sequence:
MTEGTCLRRR GGPYKTEPAT DLGRWRLNCE RGRQTWTYLQ DERAGREQTG LEAYALGLDT KNYFKDLPKA HTAFEGALNG MTFYVGLQAE DGHWTGDYGG PLFLLPGLLI TCHVARIPLP AGYREEIVRY LRSVQLPDGG WGLHIEDKST VFGTALNYVS LRILGVGPDD PDLVRARNIL HKKGGAVAIP SWGKFWLAVL NVYSWEGLNT LFPEMWLFPD WAPAHPSTLW CHCRQVYLPM SYCYAVRLSA AEDPLVQSLR QELYVEDFAS IDWLAQRNNV APDELYTPHS WLLRVVYALL NLYEHHHSAH LRQRAVQKLY EHIVADDRFT KSISIGPISK TINMLVRWYV DWPASTAFQE HVSRIPDYLW MGLDGMKMQG TNGSQIWDTA FAIQALLEAG GHHRPEFSSC LQKAHEFLRL SQVPDNPPDY QKYYRQMRKG GFSFSTLDCG WIVSDCTAEA LKAVLLLQEK CPHVTEHIPR ERLCDAVAVL LNMRNPDGGF ATYETKRGGH LLELLNPSEV FGDIMIDYTY VECTSAVMQA LKYFHKRFPE HRAAEIRETL TQGLEFCRRQ QRADGSWEGS WGVCFTYGTW FGLEAFACMG QTYRDGTACA EVSRACDFLL SRQMADGGWG EDFESCEERR YVQSAQSQIH NTCWAMMGLM AVRHPDIEAQ ERGVRCLLEK QLPNGDWPQE NIAGVFNKSC AISYTSYRNI FPIWALGRFS QLYPERALAG HP
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.