Details for: RPS27

Gene ID: 6232

Symbol: RPS27

Ensembl ID: ENSG00000177954

Description: ribosomal protein S27

Associated with

Cells (max top 100)

(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)

  • Cell Name: embryonic stem cell (CL0002322)
    Fold Change: 802.9176
    Cell Significance Index: -330.7600
  • Cell Name: smooth muscle fiber of ileum (CL1000278)
    Fold Change: 668.6186
    Cell Significance Index: -315.6700
  • Cell Name: peripheral blood mononuclear cell (CL2000001)
    Fold Change: 654.1595
    Cell Significance Index: -336.4900
  • Cell Name: ileal goblet cell (CL1000326)
    Fold Change: 472.6074
    Cell Significance Index: -317.1300
  • Cell Name: CD8-alpha-beta-positive, alpha-beta intraepithelial T cell (CL0000796)
    Fold Change: 33.4881
    Cell Significance Index: -89.7100
  • Cell Name: hepatic pit cell (CL2000054)
    Fold Change: 27.8157
    Cell Significance Index: 74.5200
  • Cell Name: theca cell (CL0000503)
    Fold Change: 23.8688
    Cell Significance Index: 140.2300
  • Cell Name: abnormal cell (CL0001061)
    Fold Change: 18.3137
    Cell Significance Index: 1870.7400
  • Cell Name: pro-T cell (CL0000827)
    Fold Change: 16.5186
    Cell Significance Index: 422.0000
  • Cell Name: fibroblast of mammary gland (CL0002555)
    Fold Change: 15.2615
    Cell Significance Index: 437.4800
  • Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
    Fold Change: 13.9447
    Cell Significance Index: 655.3900
  • Cell Name: granulosa cell (CL0000501)
    Fold Change: 13.7376
    Cell Significance Index: 361.2300
  • Cell Name: vascular lymphangioblast (CL0005022)
    Fold Change: 13.1306
    Cell Significance Index: 232.0400
  • Cell Name: neutrophil progenitor cell (CL0000834)
    Fold Change: 11.7302
    Cell Significance Index: 313.7800
  • Cell Name: fibroblast of dermis (CL0002551)
    Fold Change: 11.2667
    Cell Significance Index: 235.8300
  • Cell Name: endothelial cell of venule (CL1000414)
    Fold Change: 11.2267
    Cell Significance Index: 127.5400
  • Cell Name: basal cell of urothelium (CL1000486)
    Fold Change: 10.7818
    Cell Significance Index: 1325.7200
  • Cell Name: intermediate cell of urothelium (CL4030055)
    Fold Change: 10.6598
    Cell Significance Index: 1921.6300
  • Cell Name: sebum secreting cell (CL0000317)
    Fold Change: 10.5819
    Cell Significance Index: 748.4000
  • Cell Name: interstitial cell of ovary (CL0002094)
    Fold Change: 10.1404
    Cell Significance Index: 129.8700
  • Cell Name: stromal cell of ovary (CL0002132)
    Fold Change: 9.8526
    Cell Significance Index: 1353.0400
  • Cell Name: lactocyte (CL0002325)
    Fold Change: 9.7838
    Cell Significance Index: 1264.0000
  • Cell Name: tonsil germinal center B cell (CL2000006)
    Fold Change: 9.5702
    Cell Significance Index: 1128.6200
  • Cell Name: odontoblast (CL0000060)
    Fold Change: 9.4162
    Cell Significance Index: 1207.1000
  • Cell Name: hair follicular keratinocyte (CL2000092)
    Fold Change: 9.3374
    Cell Significance Index: 4128.3100
  • Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
    Fold Change: 9.1812
    Cell Significance Index: 684.2700
  • Cell Name: CD14-positive, CD16-negative classical monocyte (CL0002057)
    Fold Change: 8.5237
    Cell Significance Index: 157.5400
  • Cell Name: pulmonary alveolar epithelial cell (CL0000322)
    Fold Change: 8.1100
    Cell Significance Index: 6138.5900
  • Cell Name: cell in vitro (CL0001034)
    Fold Change: 7.9123
    Cell Significance Index: 4321.1100
  • Cell Name: luminal hormone-sensing cell of mammary gland (CL4033058)
    Fold Change: 6.4785
    Cell Significance Index: 39.8700
  • Cell Name: skeletal muscle myoblast (CL0000515)
    Fold Change: 6.4693
    Cell Significance Index: 70.3300
  • Cell Name: early pro-B cell (CL0002046)
    Fold Change: 6.4266
    Cell Significance Index: 414.6100
  • Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
    Fold Change: 6.3537
    Cell Significance Index: 220.7900
  • Cell Name: peg cell (CL4033014)
    Fold Change: 5.5148
    Cell Significance Index: 127.4100
  • Cell Name: CD4-positive, alpha-beta memory T cell, CD45RO-positive (CL0001204)
    Fold Change: 5.4592
    Cell Significance Index: 160.3300
  • Cell Name: glycinergic neuron (CL1001509)
    Fold Change: 5.4257
    Cell Significance Index: 284.8700
  • Cell Name: basal cell of prostate epithelium (CL0002341)
    Fold Change: 5.2827
    Cell Significance Index: 143.7900
  • Cell Name: umbrella cell of urothelium (CL4030056)
    Fold Change: 5.2250
    Cell Significance Index: 48.1200
  • Cell Name: kidney cell (CL1000497)
    Fold Change: 4.8733
    Cell Significance Index: 38.9100
  • Cell Name: acinar cell of salivary gland (CL0002623)
    Fold Change: 4.8341
    Cell Significance Index: 225.3900
  • Cell Name: pancreatic acinar cell (CL0002064)
    Fold Change: 4.0912
    Cell Significance Index: 698.5900
  • Cell Name: enterocyte of epithelium of large intestine (CL0002071)
    Fold Change: 3.4856
    Cell Significance Index: 157.9900
  • Cell Name: tuft cell of colon (CL0009041)
    Fold Change: 3.3148
    Cell Significance Index: 2993.0200
  • Cell Name: placental villous trophoblast (CL2000060)
    Fold Change: 1.6572
    Cell Significance Index: 44.2500
  • Cell Name: enteroendocrine cell of colon (CL0009042)
    Fold Change: 1.4009
    Cell Significance Index: 266.6000
  • Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
    Fold Change: 1.2102
    Cell Significance Index: 887.3200
  • Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
    Fold Change: 1.0277
    Cell Significance Index: 81.3900
  • Cell Name: neoplastic cell (CL0001063)
    Fold Change: 0.9700
    Cell Significance Index: 192.5100
  • Cell Name: oral mucosa squamous cell (CL1001576)
    Fold Change: 0.8391
    Cell Significance Index: 7.2100
  • Cell Name: epithelial cell of small intestine (CL0002254)
    Fold Change: 0.4764
    Cell Significance Index: 77.4800
  • Cell Name: microfold cell of epithelium of small intestine (CL1000353)
    Fold Change: 0.1969
    Cell Significance Index: 13.6200
  • Cell Name: colon goblet cell (CL0009039)
    Fold Change: 0.0491
    Cell Significance Index: 4.8500
  • Cell Name: pigmented epithelial cell (CL0000529)
    Fold Change: -0.0142
    Cell Significance Index: -26.8300
  • Cell Name: anterior lens cell (CL0002223)
    Fold Change: -0.1175
    Cell Significance Index: -216.7900
  • Cell Name: pancreatic A cell (CL0000171)
    Fold Change: -0.1246
    Cell Significance Index: -92.3200
  • Cell Name: lens epithelial cell (CL0002224)
    Fold Change: -0.1448
    Cell Significance Index: -222.9800
  • Cell Name: secondary lens fiber (CL0002225)
    Fold Change: -0.2308
    Cell Significance Index: -313.7700
  • Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
    Fold Change: -0.2528
    Cell Significance Index: -90.6900
  • Cell Name: type B pancreatic cell (CL0000169)
    Fold Change: -0.2730
    Cell Significance Index: -153.9900
  • Cell Name: pancreatic PP cell (CL0002275)
    Fold Change: -0.2919
    Cell Significance Index: -182.2700
  • Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
    Fold Change: -0.3338
    Cell Significance Index: -211.9800
  • Cell Name: ciliary muscle cell (CL1000443)
    Fold Change: -0.3791
    Cell Significance Index: -172.0800
  • Cell Name: forebrain neuroblast (CL1000042)
    Fold Change: -0.4433
    Cell Significance Index: -27.2500
  • Cell Name: bladder urothelial cell (CL1001428)
    Fold Change: -0.5842
    Cell Significance Index: -30.3500
  • Cell Name: pancreatic D cell (CL0000173)
    Fold Change: -0.6438
    Cell Significance Index: -135.6100
  • Cell Name: pancreatic endocrine cell (CL0008024)
    Fold Change: -0.6534
    Cell Significance Index: -74.5900
  • Cell Name: enterocyte of epithelium of small intestine (CL1000334)
    Fold Change: -0.6766
    Cell Significance Index: -19.5000
  • Cell Name: fibro/adipogenic progenitor cell (CL0009099)
    Fold Change: -0.7584
    Cell Significance Index: -38.3300
  • Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
    Fold Change: -0.8376
    Cell Significance Index: -168.0300
  • Cell Name: dopaminergic neuron (CL0000700)
    Fold Change: -0.8724
    Cell Significance Index: -251.0100
  • Cell Name: CD4-positive, alpha-beta thymocyte (CL0000810)
    Fold Change: -0.8957
    Cell Significance Index: -15.4400
  • Cell Name: neuron associated cell (CL0000095)
    Fold Change: -1.0023
    Cell Significance Index: -41.0700
  • Cell Name: seromucus secreting cell (CL0000159)
    Fold Change: -1.0328
    Cell Significance Index: -21.5400
  • Cell Name: pancreatic ductal cell (CL0002079)
    Fold Change: -1.3305
    Cell Significance Index: -152.4300
  • Cell Name: transit amplifying cell of colon (CL0009011)
    Fold Change: -1.5286
    Cell Significance Index: -48.9600
  • Cell Name: pigmented ciliary epithelial cell (CL0002303)
    Fold Change: -1.8236
    Cell Significance Index: -265.0800
  • Cell Name: retinal progenitor cell (CL0002672)
    Fold Change: -1.8924
    Cell Significance Index: -106.1900
  • Cell Name: mesenchymal cell (CL0008019)
    Fold Change: -2.1206
    Cell Significance Index: -35.4900
  • Cell Name: enteroendocrine cell of small intestine (CL0009006)
    Fold Change: -2.2851
    Cell Significance Index: -57.1200
  • Cell Name: eye photoreceptor cell (CL0000287)
    Fold Change: -2.3496
    Cell Significance Index: -148.0900
  • Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
    Fold Change: -2.8811
    Cell Significance Index: -300.0000
  • Cell Name: small intestine goblet cell (CL1000495)
    Fold Change: -2.9462
    Cell Significance Index: -103.5300
  • Cell Name: mature alpha-beta T cell (CL0000791)
    Fold Change: -3.3194
    Cell Significance Index: -18.1000
  • Cell Name: cardiac muscle myoblast (CL0000513)
    Fold Change: -3.7591
    Cell Significance Index: -288.4700
  • Cell Name: endothelial cell of placenta (CL0009092)
    Fold Change: -3.9624
    Cell Significance Index: -23.9400
  • Cell Name: paneth cell of colon (CL0009009)
    Fold Change: -4.1564
    Cell Significance Index: -62.2800
  • Cell Name: intestinal tuft cell (CL0019032)
    Fold Change: -4.5001
    Cell Significance Index: -275.9000
  • Cell Name: gut absorptive cell (CL0000677)
    Fold Change: -4.5139
    Cell Significance Index: -270.9900
  • Cell Name: hippocampal granule cell (CL0001033)
    Fold Change: -4.7229
    Cell Significance Index: -317.5700
  • Cell Name: paneth cell of epithelium of small intestine (CL1000343)
    Fold Change: -4.7580
    Cell Significance Index: -103.0800
  • Cell Name: conjunctival epithelial cell (CL1000432)
    Fold Change: -4.8096
    Cell Significance Index: -65.6200
  • Cell Name: kidney epithelial cell (CL0002518)
    Fold Change: -6.5087
    Cell Significance Index: -191.7100
  • Cell Name: indirect pathway medium spiny neuron (CL4023029)
    Fold Change: -6.9035
    Cell Significance Index: -305.3600
  • Cell Name: perivascular cell (CL4033054)
    Fold Change: -7.1970
    Cell Significance Index: -33.2300
  • Cell Name: cerebellar granule cell (CL0001031)
    Fold Change: -7.5433
    Cell Significance Index: -129.2700
  • Cell Name: stratified epithelial cell (CL0000079)
    Fold Change: -7.5698
    Cell Significance Index: -277.8800
  • Cell Name: direct pathway medium spiny neuron (CL4023026)
    Fold Change: -8.1772
    Cell Significance Index: -309.6500
  • Cell Name: skeletal muscle fiber (CL0008002)
    Fold Change: -8.6829
    Cell Significance Index: -223.1900
  • Cell Name: Sertoli cell (CL0000216)
    Fold Change: -9.0322
    Cell Significance Index: -126.6900
  • Cell Name: luminal epithelial cell of mammary gland (CL0002326)
    Fold Change: -9.0659
    Cell Significance Index: -116.7500

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Other Information

**Key Characteristics:** RPS27 is a 10-kDa protein that belongs to the ribosomal protein family. It is highly conserved across species, with high sequence similarity to its counterparts in other organisms. RPS27 is a critical component of the 40S ribosomal subunit, which is responsible for translating mRNA into proteins. The protein is also involved in the assembly of the 40S subunit and the formation of the 43S complex, a crucial step in translation initiation. **Pathways and Functions:** RPS27 is involved in various cellular processes, including: 1. **Ribosome biogenesis:** RPS27 plays a crucial role in the assembly of the 40S ribosomal subunit, which is essential for protein synthesis. 2. **Translation initiation:** RPS27 is involved in the formation of the 43S complex, a critical step in translation initiation. 3. **Cell cycle regulation:** RPS27 is involved in the regulation of the cell cycle, particularly during mitosis, where it plays a role in the separation of sister chromatids. 4. **Signal transduction:** RPS27 is involved in signal transduction pathways, including those mediated by Rho GTPases and Miro GTPases. 5. **Antigen presentation:** RPS27 is expressed on the surface of professional antigen-presenting cells, such as dendritic cells and macrophages. **Clinical Significance:** RPS27 has been implicated in various diseases, including: 1. **Influenza infection:** RPS27 has been shown to play a role in the replication of influenza virus, highlighting its importance in antiviral defense. 2. **Cancer:** RPS27 has been found to be overexpressed in various types of cancer, including breast, lung, and colon cancer. 3. **Neurological disorders:** RPS27 has been implicated in neurological disorders, such as Alzheimer's disease and Parkinson's disease, where it plays a role in protein aggregation and translation regulation. 4. **Infectious diseases:** RPS27 has been shown to be involved in the pathogenesis of infectious diseases, such as SARS-CoV-1 and SARS-CoV-2. **Conclusion:** RPS27 is a crucial protein that plays a vital role in ribosome biogenesis, translation, and cell cycle regulation. Its involvement in various cellular processes highlights its importance in maintaining cellular homeostasis and responding to environmental stresses. Further research is needed to fully understand the mechanisms by which RPS27 regulates cellular processes and to explore its potential as a therapeutic target in various diseases. **Future Directions:** 1. **Investigating RPS27's role in disease:** Further research is needed to explore RPS27's role in various diseases, including cancer, neurological disorders, and infectious diseases. 2. **Developing therapeutic strategies:** RPS27 could be a potential therapeutic target for diseases where its expression is dysregulated. 3. **Understanding RPS27's interactions with other proteins:** Further research is needed to understand RPS27's interactions with other proteins and how these interactions regulate cellular processes.

Genular Protein ID: 4260677873

Symbol: RS27_HUMAN

Name: 40S ribosomal protein S27

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 8407955

Title: A growth factor-inducible gene encodes a novel nuclear protein with zinc finger structure.

PubMed ID: 8407955

DOI: 10.1016/s0021-9258(19)36910-8

PubMed ID: 8908372

Title: Primary structures and sequence analysis of human ribosomal proteins L39 and S27.

PubMed ID: 8908372

DOI: 10.1080/15216549600201203

PubMed ID: 11875025

Title: The human ribosomal protein genes: sequencing and comparative analysis of 73 genes.

PubMed ID: 11875025

DOI: 10.1101/gr.214202

PubMed ID: 14702039

Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.

PubMed ID: 14702039

DOI: 10.1038/ng1285

PubMed ID: 16710414

Title: The DNA sequence and biological annotation of human chromosome 1.

PubMed ID: 16710414

DOI: 10.1038/nature04727

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 8706699

Title: Characterization of the human small-ribosomal-subunit proteins by N-terminal and internal sequencing, and mass spectrometry.

PubMed ID: 8706699

DOI: 10.1111/j.1432-1033.1996.0144u.x

PubMed ID: 9582194

Title: A map of 75 human ribosomal protein genes.

PubMed ID: 9582194

DOI: 10.1101/gr.8.5.509

PubMed ID: 14654843

Title: Proteomic characterization of the human centrosome by protein correlation profiling.

PubMed ID: 14654843

DOI: 10.1038/nature02166

PubMed ID: 17081983

Title: Global, in vivo, and site-specific phosphorylation dynamics in signaling networks.

PubMed ID: 17081983

DOI: 10.1016/j.cell.2006.09.026

PubMed ID: 18669648

Title: A quantitative atlas of mitotic phosphorylation.

PubMed ID: 18669648

DOI: 10.1073/pnas.0805139105

PubMed ID: 20068231

Title: Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.

PubMed ID: 20068231

DOI: 10.1126/scisignal.2000475

PubMed ID: 21269460

Title: Initial characterization of the human central proteome.

PubMed ID: 21269460

DOI: 10.1186/1752-0509-5-17

PubMed ID: 22814378

Title: N-terminal acetylome analyses and functional insights of the N-terminal acetyltransferase NatB.

PubMed ID: 22814378

DOI: 10.1073/pnas.1210303109

PubMed ID: 23186163

Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.

PubMed ID: 23186163

DOI: 10.1021/pr300630k

PubMed ID: 24524803

Title: A new system for naming ribosomal proteins.

PubMed ID: 24524803

DOI: 10.1016/j.sbi.2014.01.002

PubMed ID: 24275569

Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.

PubMed ID: 24275569

DOI: 10.1016/j.jprot.2013.11.014

PubMed ID: 25424902

Title: Loss of function mutations in RPL27 and RPS27 identified by whole-exome sequencing in Diamond-Blackfan anaemia.

PubMed ID: 25424902

DOI: 10.1111/bjh.13229

PubMed ID: 23636399

Title: Structures of the human and Drosophila 80S ribosome.

PubMed ID: 23636399

DOI: 10.1038/nature12104

PubMed ID: 34516797

Title: Nucleolar maturation of the human small subunit processome.

PubMed ID: 34516797

DOI: 10.1126/science.abj5338

Sequence Information:

  • Length: 84
  • Mass: 9461
  • Checksum: 242C4466AC8A8900
  • Sequence:
  • MPLAKDLLHP SPEEEKRKHK KKRLVQSPNS YFMDVKCPGC YKITTVFSHA QTVVLCVGCS 
    TVLCQPTGGK ARLTEGCSFR RKQH

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.