Details for: TFAM
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: polychromatophilic erythroblast (CL0000550)
Fold Change: 200.0704
Cell Significance Index: -31.1200 - Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
Fold Change: 110.4109
Cell Significance Index: -28.0100 - Cell Name: smooth muscle fiber of ileum (CL1000278)
Fold Change: 80.4664
Cell Significance Index: -37.9900 - Cell Name: mucosal type mast cell (CL0000485)
Fold Change: 79.7278
Cell Significance Index: -32.3900 - Cell Name: peripheral blood mononuclear cell (CL2000001)
Fold Change: 73.0386
Cell Significance Index: -37.5700 - Cell Name: ciliated cell of the bronchus (CL0002332)
Fold Change: 34.1872
Cell Significance Index: -32.6400 - Cell Name: orthochromatic erythroblast (CL0000552)
Fold Change: 28.8737
Cell Significance Index: -35.6000 - Cell Name: CD8-alpha-beta-positive, alpha-beta intraepithelial T cell (CL0000796)
Fold Change: 11.9547
Cell Significance Index: -32.0300 - Cell Name: stromal cell of bone marrow (CL0010001)
Fold Change: 9.3207
Cell Significance Index: -36.7800 - Cell Name: CD8-positive, alpha-beta regulatory T cell (CL0000795)
Fold Change: 7.1367
Cell Significance Index: -21.9200 - Cell Name: epidermal Langerhans cell (CL0002457)
Fold Change: 5.8942
Cell Significance Index: -12.9000 - Cell Name: epithelial cell of stomach (CL0002178)
Fold Change: 2.4905
Cell Significance Index: 290.2400 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 1.8330
Cell Significance Index: 199.3700 - Cell Name: basal cell of prostate epithelium (CL0002341)
Fold Change: 1.6194
Cell Significance Index: 44.0800 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: 1.2197
Cell Significance Index: 149.9700 - Cell Name: sebum secreting cell (CL0000317)
Fold Change: 0.9991
Cell Significance Index: 70.6600 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: 0.9051
Cell Significance Index: 163.1700 - Cell Name: hair follicular keratinocyte (CL2000092)
Fold Change: 0.8308
Cell Significance Index: 367.3200 - Cell Name: peg cell (CL4033014)
Fold Change: 0.8254
Cell Significance Index: 19.0700 - Cell Name: cell in vitro (CL0001034)
Fold Change: 0.8163
Cell Significance Index: 445.8200 - Cell Name: tonsil germinal center B cell (CL2000006)
Fold Change: 0.7992
Cell Significance Index: 94.2500 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 0.7764
Cell Significance Index: 701.0700 - Cell Name: enteroendocrine cell of small intestine (CL0009006)
Fold Change: 0.7109
Cell Significance Index: 17.7700 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: 0.6733
Cell Significance Index: 92.4700 - Cell Name: granulosa cell (CL0000501)
Fold Change: 0.6237
Cell Significance Index: 16.4000 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 0.6181
Cell Significance Index: 100.5400 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: 0.5891
Cell Significance Index: 26.7000 - Cell Name: early pro-B cell (CL0002046)
Fold Change: 0.5844
Cell Significance Index: 37.7100 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: 0.5607
Cell Significance Index: 16.1600 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: 0.5173
Cell Significance Index: 24.1200 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: 0.4443
Cell Significance Index: 23.0800 - Cell Name: umbrella cell of urothelium (CL4030056)
Fold Change: 0.4420
Cell Significance Index: 4.0700 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: 0.4303
Cell Significance Index: 11.4900 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 0.4261
Cell Significance Index: 84.5700 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: 0.4069
Cell Significance Index: 25.6500 - Cell Name: microcirculation associated smooth muscle cell (CL0008035)
Fold Change: 0.4048
Cell Significance Index: 3.4000 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 0.3882
Cell Significance Index: 77.8700 - Cell Name: kidney cell (CL1000497)
Fold Change: 0.3845
Cell Significance Index: 3.0700 - Cell Name: paneth cell of epithelium of small intestine (CL1000343)
Fold Change: 0.3660
Cell Significance Index: 7.9300 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: 0.3460
Cell Significance Index: 16.2600 - Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
Fold Change: 0.3404
Cell Significance Index: 11.8300 - Cell Name: odontoblast (CL0000060)
Fold Change: 0.3221
Cell Significance Index: 41.2900 - Cell Name: fibroblast of mammary gland (CL0002555)
Fold Change: 0.2512
Cell Significance Index: 7.2000 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 0.2265
Cell Significance Index: 81.2400 - Cell Name: skeletal muscle myoblast (CL0000515)
Fold Change: 0.1840
Cell Significance Index: 2.0000 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: 0.1703
Cell Significance Index: 29.0800 - Cell Name: fibroblast of dermis (CL0002551)
Fold Change: 0.1691
Cell Significance Index: 3.5400 - Cell Name: endothelial cell of venule (CL1000414)
Fold Change: 0.1593
Cell Significance Index: 1.8100 - Cell Name: GABAergic interneuron (CL0011005)
Fold Change: 0.1505
Cell Significance Index: 104.0700 - Cell Name: transit amplifying cell of colon (CL0009011)
Fold Change: 0.1405
Cell Significance Index: 4.5000 - Cell Name: lactocyte (CL0002325)
Fold Change: 0.1383
Cell Significance Index: 17.8700 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: 0.0835
Cell Significance Index: 6.2200 - Cell Name: enteroendocrine cell of colon (CL0009042)
Fold Change: 0.0588
Cell Significance Index: 11.1900 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: 0.0504
Cell Significance Index: 1.7700 - Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
Fold Change: 0.0441
Cell Significance Index: 32.3500 - Cell Name: colon goblet cell (CL0009039)
Fold Change: 0.0235
Cell Significance Index: 2.3200 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: 0.0233
Cell Significance Index: 1.3100 - Cell Name: CD4-positive, alpha-beta memory T cell, CD45RO-positive (CL0001204)
Fold Change: 0.0048
Cell Significance Index: 0.1400 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: 0.0009
Cell Significance Index: 1.7000 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0070
Cell Significance Index: -5.1500 - Cell Name: pancreatic PP cell (CL0002275)
Fold Change: -0.0111
Cell Significance Index: -6.9300 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: -0.0117
Cell Significance Index: -8.8600 - Cell Name: anterior lens cell (CL0002223)
Fold Change: -0.0168
Cell Significance Index: -31.0500 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: -0.0229
Cell Significance Index: -35.2200 - Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
Fold Change: -0.0258
Cell Significance Index: -0.5500 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: -0.0281
Cell Significance Index: -38.1700 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.0361
Cell Significance Index: -3.6900 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: -0.0369
Cell Significance Index: -23.4100 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0396
Cell Significance Index: -22.3100 - Cell Name: mesenchymal cell (CL0008019)
Fold Change: -0.0535
Cell Significance Index: -0.9000 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: -0.0547
Cell Significance Index: -24.8300 - Cell Name: lung endothelial cell (CL1001567)
Fold Change: -0.0578
Cell Significance Index: -3.0100 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: -0.0662
Cell Significance Index: -4.0700 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.0820
Cell Significance Index: -17.2700 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: -0.0996
Cell Significance Index: -5.2300 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.1027
Cell Significance Index: -29.5400 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.1463
Cell Significance Index: -16.7700 - Cell Name: pancreatic endocrine cell (CL0008024)
Fold Change: -0.1548
Cell Significance Index: -17.6700 - Cell Name: pro-T cell (CL0000827)
Fold Change: -0.1621
Cell Significance Index: -4.1400 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: -0.1644
Cell Significance Index: -4.4100 - Cell Name: interstitial cell of ovary (CL0002094)
Fold Change: -0.1655
Cell Significance Index: -2.1200 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: -0.1824
Cell Significance Index: -26.5200 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: -0.2047
Cell Significance Index: -15.7100 - Cell Name: endothelial cell of placenta (CL0009092)
Fold Change: -0.2648
Cell Significance Index: -1.6000 - Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
Fold Change: -0.2694
Cell Significance Index: -21.3400 - Cell Name: neutrophil progenitor cell (CL0000834)
Fold Change: -0.2970
Cell Significance Index: -7.9500 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: -0.2977
Cell Significance Index: -8.3200 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: -0.3108
Cell Significance Index: -4.2400 - Cell Name: CD14-positive, CD16-negative classical monocyte (CL0002057)
Fold Change: -0.3284
Cell Significance Index: -6.0700 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: -0.3423
Cell Significance Index: -35.6400 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: -0.3867
Cell Significance Index: -26.0100 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: -0.4650
Cell Significance Index: -28.5100 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: -0.5296
Cell Significance Index: -23.4300 - Cell Name: skeletal muscle fiber (CL0008002)
Fold Change: -0.5952
Cell Significance Index: -15.3000 - Cell Name: fibro/adipogenic progenitor cell (CL0009099)
Fold Change: -0.6029
Cell Significance Index: -30.4700 - Cell Name: cone retinal bipolar cell (CL0000752)
Fold Change: -0.6059
Cell Significance Index: -4.6700 - Cell Name: cerebellar granule cell (CL0001031)
Fold Change: -0.6133
Cell Significance Index: -10.5100 - Cell Name: retinal rod cell (CL0000604)
Fold Change: -0.6384
Cell Significance Index: -7.6100 - Cell Name: direct pathway medium spiny neuron (CL4023026)
Fold Change: -0.6496
Cell Significance Index: -24.6000 - Cell Name: neuron associated cell (CL0000095)
Fold Change: -0.7142
Cell Significance Index: -29.2700
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 2388740979
Symbol: TFAM_HUMAN
Name: Mitochondrial transcription factor 1
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 2035027
Title: Similarity of human mitochondrial transcription factor 1 to high mobility group proteins.
PubMed ID: 2035027
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 19054851
Title: Human protein factory for converting the transcriptome into an in vitro-expressed proteome.
PubMed ID: 19054851
DOI: 10.1038/nmeth.1273
PubMed ID: 15164054
Title: The DNA sequence and comparative analysis of human chromosome 10.
PubMed ID: 15164054
DOI: 10.1038/nature02462
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 1610904
Title: Upstream region of a genomic gene for human mitochondrial transcription factor 1.
PubMed ID: 1610904
PubMed ID: 1737790
Title: DNA wrapping and bending by a mitochondrial high mobility group-like transcriptional activator protein.
PubMed ID: 1737790
PubMed ID: 12897151
Title: Human mitochondrial transcription factor B1 interacts with the C-terminal activation region of h-mtTFA and stimulates transcription independently of its RNA methyltransferase activity.
PubMed ID: 12897151
PubMed ID: 18063578
Title: The layered structure of human mitochondrial DNA nucleoids.
PubMed ID: 18063578
PubMed ID: 18669648
Title: A quantitative atlas of mitotic phosphorylation.
PubMed ID: 18669648
PubMed ID: 20410300
Title: Human mitochondrial transcription revisited: only TFAM and TFB2M are required for transcription of the mitochondrial genes in vitro.
PubMed ID: 20410300
PubMed ID: 21269460
Title: Initial characterization of the human central proteome.
PubMed ID: 21269460
PubMed ID: 21406692
Title: System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation.
PubMed ID: 21406692
PubMed ID: 22841477
Title: Maintenance of mitochondrial genome distribution by mitochondrial AAA+ protein ClpX.
PubMed ID: 22841477
PubMed ID: 23186163
Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.
PubMed ID: 23186163
DOI: 10.1021/pr300630k
PubMed ID: 23201127
Title: Phosphorylation of human TFAM in mitochondria impairs DNA binding and promotes degradation by the AAA+ Lon protease.
PubMed ID: 23201127
PubMed ID: 25944712
Title: N-terminome analysis of the human mitochondrial proteome.
PubMed ID: 25944712
PubMed ID: 27448789
Title: Mutations in TFAM, encoding mitochondrial transcription factor A, cause neonatal liver failure associated with mtDNA depletion.
PubMed ID: 27448789
PubMed ID: 29445193
Title: Uncoupling FoxO3A mitochondrial and nuclear functions in cancer cells undergoing metabolic stress and chemotherapy.
PubMed ID: 29445193
PubMed ID: 32183942
Title: N6-deoxyadenosine methylation in mammalian mitochondrial DNA.
PubMed ID: 32183942
PubMed ID: 19304746
Title: Structural analysis and DNA binding of the HMG domains of the human mitochondrial transcription factor A.
PubMed ID: 19304746
DOI: 10.1093/nar/gkp157
PubMed ID: 22037172
Title: Human mitochondrial transcription factor A induces a U-turn structure in the light strand promoter.
PubMed ID: 22037172
DOI: 10.1038/nsmb.2160
PubMed ID: 22037171
Title: The mitochondrial transcription and packaging factor Tfam imposes a U-turn on mitochondrial DNA.
PubMed ID: 22037171
DOI: 10.1038/nsmb.2159
PubMed ID: 29149603
Title: Structural Basis of Mitochondrial Transcription Initiation.
PubMed ID: 29149603
PubMed ID: 19096125
Title: Mitochondrial transcription factors TFA, TFB1 and TFB2: a search for DNA variants/haplotypes and the risk of cardiac hypertrophy.
PubMed ID: 19096125
DOI: 10.1155/2008/575323
Sequence Information:
- Length: 246
- Mass: 29097
- Checksum: 81F00CFA12DA4924
- Sequence:
MAFLRSMWGV LSALGRSGAE LCTGCGSRLR SPFSFVYLPR WFSSVLASCP KKPVSSYLRF SKEQLPIFKA QNPDAKTTEL IRRIAQRWRE LPDSKKKIYQ DAYRAEWQVY KEEISRFKEQ LTPSQIMSLE KEIMDKHLKR KAMTKKKELT LLGKPKRPRS AYNVYVAERF QEAKGDSPQE KLKTVKENWK NLSDSEKELY IQHAKEDETR YHNEMKSWEE QMIEVGRKDL LRRTIKKQRK YGAEEC
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.