Details for: FANCD2
Associated with
Cells (max top 100)
(Marker Score score is uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: oogonial cell (CL0000024)
Fold Change: 1.04
Marker Score: 1488 - Cell Name: cerebral cortex GABAergic interneuron (CL0010011)
Fold Change: 1
Marker Score: 71794 - Cell Name: forebrain radial glial cell (CL0013000)
Fold Change: 1
Marker Score: 48018.5 - Cell Name: absorptive cell (CL0000212)
Fold Change: 0.98
Marker Score: 30405 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 0.96
Marker Score: 494 - Cell Name: BEST4+ intestinal epithelial cell, human (CL4030026)
Fold Change: 0.95
Marker Score: 448 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 0.95
Marker Score: 2408 - Cell Name: abnormal cell (CL0001061)
Fold Change: 0.91
Marker Score: 2728 - Cell Name: transit amplifying cell (CL0009010)
Fold Change: 0.89
Marker Score: 5074 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 0.87
Marker Score: 5294 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 0.87
Marker Score: 314 - Cell Name: intestinal epithelial cell (CL0002563)
Fold Change: 0.76
Marker Score: 1239 - Cell Name: Cajal-Retzius cell (CL0000695)
Fold Change: 0.74
Marker Score: 384 - Cell Name: proerythroblast (CL0000547)
Fold Change: 0.73
Marker Score: 494 - Cell Name: early T lineage precursor (CL0002425)
Fold Change: 0.72
Marker Score: 553 - Cell Name: large pre-B-II cell (CL0000957)
Fold Change: 0.72
Marker Score: 1955.5 - Cell Name: primordial germ cell (CL0000670)
Fold Change: 0.71
Marker Score: 893.5 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: 0.71
Marker Score: 285 - Cell Name: brush cell (CL0002204)
Fold Change: 0.69
Marker Score: 631 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: 0.67
Marker Score: 2830.5 - Cell Name: neutrophil progenitor cell (CL0000834)
Fold Change: 0.67
Marker Score: 172 - Cell Name: primitive red blood cell (CL0002355)
Fold Change: 0.66
Marker Score: 492 - Cell Name: migratory enteric neural crest cell (CL0002607)
Fold Change: 0.65
Marker Score: 608 - Cell Name: mesangial cell (CL0000650)
Fold Change: 0.64
Marker Score: 777.5 - Cell Name: kidney proximal convoluted tubule epithelial cell (CL1000838)
Fold Change: 0.64
Marker Score: 1329 - Cell Name: cerebellar granule cell precursor (CL0002362)
Fold Change: 0.64
Marker Score: 356 - Cell Name: tonsil germinal center B cell (CL2000006)
Fold Change: 0.62
Marker Score: 1851 - Cell Name: immature innate lymphoid cell (CL0001082)
Fold Change: 0.61
Marker Score: 1250 - Cell Name: intestinal enteroendocrine cell (CL1001516)
Fold Change: 0.55
Marker Score: 442 - Cell Name: plasmablast (CL0000980)
Fold Change: 0.54
Marker Score: 723 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: 0.54
Marker Score: 8395 - Cell Name: gut absorptive cell (CL0000677)
Fold Change: 0.54
Marker Score: 343 - Cell Name: lymphoid lineage restricted progenitor cell (CL0000838)
Fold Change: 0.5
Marker Score: 301 - Cell Name: neural crest cell (CL0011012)
Fold Change: 0.5
Marker Score: 533 - Cell Name: mesenchymal cell (CL0008019)
Fold Change: 0.47
Marker Score: 798 - Cell Name: fraction A pre-pro B cell (CL0002045)
Fold Change: 0.47
Marker Score: 469 - Cell Name: common myeloid progenitor (CL0000049)
Fold Change: 0.46
Marker Score: 123 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: 0.45
Marker Score: 509 - Cell Name: precursor B cell (CL0000817)
Fold Change: 0.44
Marker Score: 293 - Cell Name: mature B cell (CL0000785)
Fold Change: 0.44
Marker Score: 323 - Cell Name: Unknown (CL0000548)
Fold Change: 0.44
Marker Score: 317 - Cell Name: promyelocyte (CL0000836)
Fold Change: 0.43
Marker Score: 213 - Cell Name: neuroendocrine cell (CL0000165)
Fold Change: 0.43
Marker Score: 166 - Cell Name: neural progenitor cell (CL0011020)
Fold Change: 0.42
Marker Score: 1645 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: 0.42
Marker Score: 1769 - Cell Name: pro-B cell (CL0000826)
Fold Change: 0.4
Marker Score: 383 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: 0.39
Marker Score: 1552 - Cell Name: fibroblast of cardiac tissue (CL0002548)
Fold Change: 0.39
Marker Score: 2353 - Cell Name: epithelial cell of nephron (CL1000449)
Fold Change: 0.39
Marker Score: 811 - Cell Name: mononuclear cell (CL0000842)
Fold Change: 0.38
Marker Score: 123 - Cell Name: kidney proximal straight tubule epithelial cell (CL1000839)
Fold Change: 0.38
Marker Score: 884 - Cell Name: early lymphoid progenitor (CL0000936)
Fold Change: 0.37
Marker Score: 180 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: 0.36
Marker Score: 439 - Cell Name: erythroid progenitor cell (CL0000038)
Fold Change: 0.36
Marker Score: 375 - Cell Name: osteoclast (CL0000092)
Fold Change: 0.35
Marker Score: 173 - Cell Name: granulocyte monocyte progenitor cell (CL0000557)
Fold Change: 0.34
Marker Score: 218 - Cell Name: transit amplifying cell of small intestine (CL0009012)
Fold Change: 0.34
Marker Score: 142 - Cell Name: megakaryocyte-erythroid progenitor cell (CL0000050)
Fold Change: 0.33
Marker Score: 139 - Cell Name: anterior lens cell (CL0002223)
Fold Change: 0.33
Marker Score: 447 - Cell Name: lens fiber cell (CL0011004)
Fold Change: 0.33
Marker Score: 104 - Cell Name: pre-conventional dendritic cell (CL0002010)
Fold Change: 0.33
Marker Score: 97 - Cell Name: male germ cell (CL0000015)
Fold Change: 0.33
Marker Score: 94 - Cell Name: lymphocyte (CL0000542)
Fold Change: 0.32
Marker Score: 164 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: 0.32
Marker Score: 102 - Cell Name: neuroblast (sensu Vertebrata) (CL0000031)
Fold Change: 0.32
Marker Score: 201 - Cell Name: taste receptor cell (CL0000209)
Fold Change: 0.31
Marker Score: 269 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: 0.31
Marker Score: 181 - Cell Name: erythroblast (CL0000765)
Fold Change: 0.31
Marker Score: 192 - Cell Name: corneal epithelial cell (CL0000575)
Fold Change: 0.3
Marker Score: 336 - Cell Name: kidney interstitial cell (CL1000500)
Fold Change: 0.3
Marker Score: 215 - Cell Name: B cell (CL0000236)
Fold Change: 0.29
Marker Score: 280 - Cell Name: type EC enteroendocrine cell (CL0000577)
Fold Change: 0.29
Marker Score: 271 - Cell Name: IgG-negative class switched memory B cell (CL0002117)
Fold Change: 0.29
Marker Score: 282 - Cell Name: exhausted T cell (CL0011025)
Fold Change: 0.28
Marker Score: 161 - Cell Name: memory B cell (CL0000787)
Fold Change: 0.28
Marker Score: 211 - Cell Name: pro-T cell (CL0000827)
Fold Change: 0.27
Marker Score: 1124 - Cell Name: enteric smooth muscle cell (CL0002504)
Fold Change: 0.27
Marker Score: 645 - Cell Name: oocyte (CL0000023)
Fold Change: 0.27
Marker Score: 67 - Cell Name: malignant cell (CL0001064)
Fold Change: 0.27
Marker Score: 3639 - Cell Name: hematopoietic multipotent progenitor cell (CL0000837)
Fold Change: 0.27
Marker Score: 132 - Cell Name: follicular B cell (CL0000843)
Fold Change: 0.27
Marker Score: 293 - Cell Name: extravillous trophoblast (CL0008036)
Fold Change: 0.27
Marker Score: 241 - Cell Name: ependymal cell (CL0000065)
Fold Change: 0.27
Marker Score: 94 - Cell Name: smooth muscle myoblast (CL0000514)
Fold Change: 0.27
Marker Score: 127 - Cell Name: astrocyte (CL0000127)
Fold Change: 0.27
Marker Score: 230 - Cell Name: ovarian surface epithelial cell (CL2000064)
Fold Change: 0.27
Marker Score: 722 - Cell Name: CD1c-positive myeloid dendritic cell (CL0002399)
Fold Change: 0.26
Marker Score: 678 - Cell Name: megakaryocyte (CL0000556)
Fold Change: 0.26
Marker Score: 148 - Cell Name: mature alpha-beta T cell (CL0000791)
Fold Change: 0.26
Marker Score: 13742.5 - Cell Name: myeloid cell (CL0000763)
Fold Change: 0.26
Marker Score: 416 - Cell Name: epithelial cell of alveolus of lung (CL0010003)
Fold Change: 0.26
Marker Score: 116 - Cell Name: lung microvascular endothelial cell (CL2000016)
Fold Change: 0.26
Marker Score: 54.5 - Cell Name: endothelial cell of hepatic sinusoid (CL1000398)
Fold Change: 0.26
Marker Score: 56 - Cell Name: epicardial adipocyte (CL1000309)
Fold Change: 0.26
Marker Score: 124 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
Fold Change: 0.26
Marker Score: 2191 - Cell Name: radial glial cell (CL0000681)
Fold Change: 0.25
Marker Score: 94 - Cell Name: neural cell (CL0002319)
Fold Change: 0.25
Marker Score: 122 - Cell Name: mononuclear phagocyte (CL0000113)
Fold Change: 0.25
Marker Score: 253 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: 0.25
Marker Score: 2394 - Cell Name: innate lymphoid cell (CL0001065)
Fold Change: 0.25
Marker Score: 90
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Other Information
Genular Protein ID: 854674707
Symbol: FACD2_HUMAN
Name: Fanconi anemia group D2 protein
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 11239453
Title: Positional cloning of a novel Fanconi anemia gene, FANCD2.
PubMed ID: 11239453
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 17974005
Title: The full-ORF clone resource of the German cDNA consortium.
PubMed ID: 17974005
PubMed ID: 11239454
Title: Interaction of the Fanconi anemia proteins and BRCA1 in a common pathway.
PubMed ID: 11239454
PubMed ID: 12239151
Title: S-phase-specific interaction of the Fanconi anemia protein, FANCD2, with BRCA1 and RAD51.
PubMed ID: 12239151
PubMed ID: 12086603
Title: Convergence of the Fanconi anemia and ataxia telangiectasia signaling pathways.
PubMed ID: 12086603
PubMed ID: 12093742
Title: FANCE: the link between Fanconi anaemia complex assembly and activity.
PubMed ID: 12093742
DOI: 10.1093/emboj/cdf355
PubMed ID: 12649160
Title: Fanconi anemia protein complex: mapping protein interactions in the yeast 2- and 3-hybrid systems.
PubMed ID: 12649160
PubMed ID: 12874027
Title: Menin associates with FANCD2, a protein involved in repair of DNA damage.
PubMed ID: 12874027
PubMed ID: 14517836
Title: FANCD2 protein is expressed in proliferating cells of human tissues that are cancer-prone in Fanconi anaemia.
PubMed ID: 14517836
DOI: 10.1002/path.1450
PubMed ID: 12973351
Title: A novel ubiquitin ligase is deficient in Fanconi anemia.
PubMed ID: 12973351
DOI: 10.1038/ng1241
PubMed ID: 14988723
Title: The DNA crosslink-induced S-phase checkpoint depends on ATR-CHK1 and ATR-NBS1-FANCD2 pathways.
PubMed ID: 14988723
PubMed ID: 15257300
Title: BLM and the FANC proteins collaborate in a common pathway in response to stalled replication forks.
PubMed ID: 15257300
PubMed ID: 15314022
Title: ATR couples FANCD2 monoubiquitination to the DNA-damage response.
PubMed ID: 15314022
DOI: 10.1101/gad.1196104
PubMed ID: 15115758
Title: Direct interaction of FANCD2 with BRCA2 in DNA damage response pathways.
PubMed ID: 15115758
DOI: 10.1093/hmg/ddh135
PubMed ID: 15377654
Title: A role for the Fanconi anemia C protein in maintaining the DNA damage-induced G2 checkpoint.
PubMed ID: 15377654
PubMed ID: 15199141
Title: Functional interaction of monoubiquitinated FANCD2 and BRCA2/FANCD1 in chromatin.
PubMed ID: 15199141
PubMed ID: 15502827
Title: X-linked inheritance of Fanconi anemia complementation group B.
PubMed ID: 15502827
DOI: 10.1038/ng1458
PubMed ID: 15454491
Title: Regulated interaction of the Fanconi anemia protein, FANCD2, with chromatin.
PubMed ID: 15454491
PubMed ID: 15661754
Title: The Fanconi anemia pathway is required for the DNA replication stress response and for the regulation of common fragile site stability.
PubMed ID: 15661754
DOI: 10.1093/hmg/ddi065
PubMed ID: 15671039
Title: FANCD2 functions independently of BRCA2 and RAD51 associated homologous recombination in response to DNA damage.
PubMed ID: 15671039
PubMed ID: 15694335
Title: The deubiquitinating enzyme USP1 regulates the Fanconi Anemia pathway.
PubMed ID: 15694335
PubMed ID: 16116422
Title: A human ortholog of archaeal DNA repair protein Hef is defective in Fanconi anemia complementation group M.
PubMed ID: 16116422
DOI: 10.1038/ng1626
PubMed ID: 15650050
Title: Human Fanconi anemia monoubiquitination pathway promotes homologous DNA repair.
PubMed ID: 15650050
PubMed ID: 16916645
Title: UBE2T is the E2 in the Fanconi anemia pathway and undergoes negative autoregulation.
PubMed ID: 16916645
PubMed ID: 17412408
Title: Identification of the FANCI protein, a monoubiquitinated FANCD2 paralog required for DNA repair.
PubMed ID: 17412408
PubMed ID: 17460694
Title: FANCI is a second monoubiquitinated member of the Fanconi anemia pathway.
PubMed ID: 17460694
DOI: 10.1038/nsmb1252
PubMed ID: 17525332
Title: ATM and ATR substrate analysis reveals extensive protein networks responsive to DNA damage.
PubMed ID: 17525332
PubMed ID: 18691976
Title: Kinase-selective enrichment enables quantitative phosphoproteomics of the kinome across the cell cycle.
PubMed ID: 18691976
PubMed ID: 19111657
Title: Mechanistic insight into site-restricted monoubiquitination of FANCD2 by Ube2t, FANCL, and FANCI.
PubMed ID: 19111657
PubMed ID: 18212739
Title: FANCG promotes formation of a newly identified protein complex containing BRCA2, FANCD2 and XRCC3.
PubMed ID: 18212739
PubMed ID: 18469862
Title: Snm1B/Apollo mediates replication fork collapse and S Phase checkpoint activation in response to DNA interstrand cross-links.
PubMed ID: 18469862
DOI: 10.1038/onc.2008.139
PubMed ID: 18669648
Title: A quantitative atlas of mitotic phosphorylation.
PubMed ID: 18669648
PubMed ID: 19413330
Title: Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach.
PubMed ID: 19413330
DOI: 10.1021/ac9004309
PubMed ID: 19369195
Title: Large-scale proteomics analysis of the human kinome.
PubMed ID: 19369195
PubMed ID: 19465922
Title: Replication stress induces sister-chromatid bridging at fragile site loci in mitosis.
PubMed ID: 19465922
DOI: 10.1038/ncb1882
PubMed ID: 19465921
Title: The FANC pathway and BLM collaborate during mitosis to prevent micro-nucleation and chromosome abnormalities.
PubMed ID: 19465921
DOI: 10.1038/ncb1883
PubMed ID: 20603015
Title: Identification of KIAA1018/FAN1, a DNA repair nuclease recruited to DNA damage by monoubiquitinated FANCD2.
PubMed ID: 20603015
PubMed ID: 20603016
Title: Deficiency of FANCD2-associated nuclease KIAA1018/FAN1 sensitizes cells to interstrand crosslinking agents.
PubMed ID: 20603016
PubMed ID: 20603073
Title: A genetic screen identifies FAN1, a Fanconi anemia-associated nuclease necessary for DNA interstrand crosslink repair.
PubMed ID: 20603073
PubMed ID: 19995904
Title: DNA polymerase POLN participates in cross-link repair and homologous recombination.
PubMed ID: 19995904
DOI: 10.1128/mcb.01124-09
PubMed ID: 20068231
Title: Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.
PubMed ID: 20068231
PubMed ID: 21269460
Title: Initial characterization of the human central proteome.
PubMed ID: 21269460
PubMed ID: 21406692
Title: System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation.
PubMed ID: 21406692
PubMed ID: 23186163
Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.
PubMed ID: 23186163
DOI: 10.1021/pr300630k
PubMed ID: 30335751
Title: Identification of UHRF2 as a novel DNA interstrand crosslink sensor protein.
PubMed ID: 30335751
Sequence Information:
- Length: 1451
- Mass: 164128
- Checksum: BF931980ADA67405
- Sequence:
MVSKRRLSKS EDKESLTEDA SKTRKQPLSK KTKKSHIANE VEENDSIFVK LLKISGIILK TGESQNQLAV DQIAFQKKLF QTLRRHPSYP KIIEEFVSGL ESYIEDEDSF RNCLLSCERL QDEEASMGAS YSKSLIKLLL GIDILQPAII KTLFEKLPEY FFENKNSDEI NIPRLIVSQL KWLDRVVDGK DLTTKIMQLI SIAPENLQHD IITSLPEILG DSQHADVGKE LSDLLIENTS LTVPILDVLS SLRLDPNFLL KVRQLVMDKL SSIRLEDLPV IIKFILHSVT AMDTLEVISE LREKLDLQHC VLPSRLQASQ VKLKSKGRAS SSGNQESSGQ SCIILLFDVI KSAIRYEKTI SEAWIKAIEN TASVSEHKVF DLVMLFIIYS TNTQTKKYID RVLRNKIRSG CIQEQLLQST FSVHYLVLKD MCSSILSLAQ SLLHSLDQSI ISFGSLLYKY AFKFFDTYCQ QEVVGALVTH ICSGNEAEVD TALDVLLELV VLNPSAMMMN AVFVKGILDY LDNISPQQIR KLFYVLSTLA FSKQNEASSH IQDDMHLVIR KQLSSTVFKY KLIGIIGAVT MAGIMAADRS ESPSLTQERA NLSDEQCTQV TSLLQLVHSC SEQSPQASAL YYDEFANLIQ HEKLDPKALE WVGHTICNDF QDAFVVDSCV VPEGDFPFPV KALYGLEEYD TQDGIAINLL PLLFSQDFAK DGGPVTSQES GQKLVSPLCL APYFRLLRLC VERQHNGNLE EIDGLLDCPI FLTDLEPGEK LESMSAKERS FMCSLIFLTL NWFREIVNAF CQETSPEMKG KVLTRLKHIV ELQIILEKYL AVTPDYVPPL GNFDVETLDI TPHTVTAISA KIRKKGKIER KQKTDGSKTS SSDTLSEEKN SECDPTPSHR GQLNKEFTGK EEKTSLLLHN SHAFFRELDI EVFSILHCGL VTKFILDTEM HTEATEVVQL GPPELLFLLE DLSQKLESML TPPIARRVPF LKNKGSRNIG FSHLQQRSAQ EIVHCVFQLL TPMCNHLENI HNYFQCLAAE NHGVVDGPGV KVQEYHIMSS CYQRLLQIFH GLFAWSGFSQ PENQNLLYSA LHVLSSRLKQ GEHSQPLEEL LSQSVHYLQN FHQSIPSFQC ALYLIRLLMV ILEKSTASAQ NKEKIASLAR QFLCRVWPSG DKEKSNISND QLHALLCIYL EHTESILKAI EEIAGVGVPE LINSPKDASS STFPTLTRHT FVVFFRVMMA ELEKTVKKIE PGTAADSQQI HEEKLLYWNM AVRDFSILIN LIKVFDSHPV LHVCLKYGRL FVEAFLKQCM PLLDFSFRKH REDVLSLLET FQLDTRLLHH LCGHSKIHQD TRLTQHVPLL KKTLELLVCR VKAMLTLNNC REAFWLGNLK NRDLQGEEIK SQNSQESTAD ESEDDMSSQA SKSKATEDGE EDEVSAGEKE QDSDESYDDS D
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. For the full schema, download it here.