Details for: HINT1

Gene ID: 3094

Gene Type:  Protein-coding  - A gene that serves as a template for producing a messenger RNA (mRNA) molecule, which is then translated into a functional protein.

Symbol: HINT1

Ensembl ID: ENSG00000169567

Description: histidine triad nucleotide binding protein 1

Selected Context(s):  Overall

Cell Significance Landscape

Contexts:

Associated with

Significant Cells

Cell Significance Index (CSI) scores for the chosen context(s)

  • hematopoietic stem cell CL0000037
    CSI 142.69
    rCSI 94.84%
    PRS 2.44
  • plasmacytoid dendritic cell, human CL0001058
    CSI 132.99
    rCSI 92.86%
    PRS 2.16
  • central memory CD8-positive, alpha-beta T cell CL0000907
    CSI 128.35
    rCSI 86.47%
    PRS 2.48
  • central memory CD4-positive, alpha-beta T cell CL0000904
    CSI 120.35
    rCSI 71.08%
    PRS 2.87
  • common myeloid progenitor CL0000049
    CSI 116.45
    rCSI 94.16%
    PRS 2.01
  • keratinocyte CL0000312
    CSI 110.32
    rCSI 92.47%
    PRS 2.47
  • plasmablast CL0000980
    CSI 107.29
    rCSI 84.41%
    PRS 2.44
  • granulocyte monocyte progenitor cell CL0000557
    CSI 105.65
    rCSI 91.48%
    PRS 2.29
  • naive thymus-derived CD8-positive, alpha-beta T cell CL0000900
    CSI 105.19
    rCSI 73.87%
    PRS 6.28
  • early lymphoid progenitor CL0000936
    CSI 104.42
    rCSI 91.71%
    PRS 2.29
  • ciliated epithelial cell CL0000067
    CSI 103.9
    rCSI 91.37%
    PRS 1.49
  • megakaryocyte-erythroid progenitor cell CL0000050
    CSI 103.83
    rCSI 93.76%
    PRS 1.8
  • epithelial cell of lung CL0000082
    CSI 98.75
    rCSI 81.87%
    PRS 1.93
  • epithelial cell of lower respiratory tract CL0002632
    CSI 97.47
    rCSI 75.56%
    PRS 1.97
  • colon epithelial cell CL0011108
    CSI 96.87
    rCSI 100%
    PRS 1.92
  • neural crest cell CL0011012
    CSI 96.7
    rCSI 76.43%
    PRS 1.42
  • intestinal epithelial cell CL0002563
    CSI 92.65
    rCSI 96.84%
    PRS 2.21
  • CD4-positive, alpha-beta thymocyte CL0000810
    CSI 88.65
    rCSI 71.01%
    PRS 3.85
  • pro-B cell CL0000826
    CSI 88.34
    rCSI 73.16%
    PRS 2.05
  • intestine goblet cell CL0019031
    CSI 88.15
    rCSI 78.25%
    PRS 2.06
  • fallopian tube secretory epithelial cell CL4030006
    CSI 86.92
    rCSI 83.68%
    PRS 2.14
  • stem cell CL0000034
    CSI 86.65
    rCSI 83.55%
    PRS 0.6
  • multi-ciliated epithelial cell CL0005012
    CSI 85.65
    rCSI 85.48%
    PRS 1.74
  • immature B cell CL0000816
    CSI 85.18
    rCSI 63.28%
    PRS 3.06
  • double-positive, alpha-beta thymocyte CL0000809
    CSI 84.5
    rCSI 86.13%
    PRS 2.99
  • CD4-positive helper T cell CL0000492
    CSI 82.55
    rCSI 62.45%
    PRS 2.88
  • M cell of gut CL0000682
    CSI 82.41
    rCSI 87.56%
    PRS 3.72
  • group 3 innate lymphoid cell CL0001071
    CSI 81.87
    rCSI 61.52%
    PRS 2.11
  • memory B cell CL0000787
    CSI 81.72
    rCSI 80.7%
    PRS 9.12
  • CD16-negative, CD56-bright natural killer cell, human CL0000938
    CSI 81.19
    rCSI 60.88%
    PRS 6.2
  • mature B cell CL0000785
    CSI 80.36
    rCSI 69.86%
    PRS 2.52
  • transit amplifying cell of colon CL0009011
    CSI 79.34
    rCSI 93.18%
    PRS 2.51
  • fraction A pre-pro B cell CL0002045
    CSI 79.15
    rCSI 90.61%
    PRS 4.28
  • class switched memory B cell CL0000972
    CSI 78.02
    rCSI 58.24%
    PRS 3.48
  • CD4-positive, alpha-beta memory T cell CL0000897
    CSI 76.94
    rCSI 55.23%
    PRS 2.8
  • double negative thymocyte CL0002489
    CSI 76.42
    rCSI 53.13%
    PRS 2.4
  • common dendritic progenitor CL0001029
    CSI 75.95
    rCSI 95.32%
    PRS 2.6
  • T-helper 17 cell CL0000899
    CSI 75.56
    rCSI 59.99%
    PRS 3.65
  • naive B cell CL0000788
    CSI 75.48
    rCSI 64.74%
    PRS 6.68
  • pancreatic A cell CL0000171
    CSI 75.28
    rCSI 78.87%
    PRS 2.22
  • T follicular helper cell CL0002038
    CSI 75.07
    rCSI 56.18%
    PRS 3.37
  • secretory cell CL0000151
    CSI 73.8
    rCSI 77.01%
    PRS 2.1
  • goblet cell CL0000160
    CSI 71.9
    rCSI 67.94%
    PRS 2.15
  • respiratory suprabasal cell CL4033048
    CSI 71.21
    rCSI 91.33%
    PRS 2.37
  • respiratory basal cell CL0002633
    CSI 69.84
    rCSI 72.34%
    PRS 2.4
  • mucosal invariant T cell CL0000940
    CSI 69.36
    rCSI 56.04%
    PRS 5.39
  • mature T cell CL0002419
    CSI 69.14
    rCSI 53.78%
    PRS 2.95
  • lung ciliated cell CL1000271
    CSI 68.11
    rCSI 78.76%
    PRS 1.49
  • peripheral nervous system neuron CL2000032
    CSI 67.24
    rCSI 91.62%
    PRS 1.88
  • pancreatic D cell CL0000173
    CSI 65.91
    rCSI 64.82%
    PRS 2.27
  • CD4-positive, CD25-positive, alpha-beta regulatory T cell CL0000792
    CSI 64.36
    rCSI 63.21%
    PRS 3.28
  • enteroendocrine cell CL0000164
    CSI 64.29
    rCSI 87.85%
    PRS 2.27
  • precursor B cell CL0000817
    CSI 63.92
    rCSI 55.99%
    PRS 2.77
  • promyelocyte CL0000836
    CSI 62.72
    rCSI 90.46%
    PRS 2.85
  • unswitched memory B cell CL0000970
    CSI 62.27
    rCSI 52.39%
    PRS 3.46
  • mesodermal cell CL0000222
    CSI 61.94
    rCSI 74.35%
    PRS 2.05
  • naive T cell CL0000898
    CSI 61.89
    rCSI 43.07%
    PRS 3
  • enteric smooth muscle cell CL0002504
    CSI 61.17
    rCSI 87.3%
    PRS 2.35
  • neuroblast (sensu Nematoda and Protostomia) CL0000338
    CSI 60.48
    rCSI 69.85%
    PRS 1.92
  • transit amplifying cell CL0009010
    CSI 60.28
    rCSI 92.2%
    PRS 3.37
  • CD1c-positive myeloid dendritic cell CL0002399
    CSI 60.02
    rCSI 72.5%
    PRS 2.38
  • epithelial cell CL0000066
    CSI 59.07
    rCSI 90.77%
    PRS 2.99
  • common lymphoid progenitor CL0000051
    CSI 58.09
    rCSI 77.63%
    PRS 3.93
  • enterocyte CL0000584
    CSI 57.38
    rCSI 92.52%
    PRS 3.34
  • OFF-bipolar cell CL0000750
    CSI 57.19
    rCSI 78.19%
    PRS 3.84
  • conventional dendritic cell CL0000990
    CSI 56.63
    rCSI 47.27%
    PRS 6.86
  • colonocyte CL1000347
    CSI 56.36
    rCSI 80.79%
    PRS 2.89
  • neuroblast (sensu Vertebrata) CL0000031
    CSI 55.56
    rCSI 71.31%
    PRS 2.07
  • extravillous trophoblast CL0008036
    CSI 55.29
    rCSI 68.39%
    PRS 1.82
  • mucous neck cell CL0000651
    CSI 54.91
    rCSI 79.13%
    PRS 3.35
  • CD16-positive, CD56-dim natural killer cell, human CL0000939
    CSI 53.64
    rCSI 35.75%
    PRS 5.83
  • IgA plasma cell CL0000987
    CSI 52.9
    rCSI 54.16%
    PRS 3.89
  • club cell CL0000158
    CSI 52.75
    rCSI 77.27%
    PRS 2.43
  • naive thymus-derived CD4-positive, alpha-beta T cell CL0000895
    CSI 52.56
    rCSI 66.04%
    PRS 11.33
  • effector memory CD4-positive, alpha-beta T cell CL0000905
    CSI 52.23
    rCSI 71.14%
    PRS 5.16
  • kidney epithelial cell CL0002518
    CSI 51.51
    rCSI 98.32%
    PRS 5.09
  • pulmonary ionocyte CL0017000
    CSI 51.32
    rCSI 62.47%
    PRS 2.6
  • melanocyte CL0000148
    CSI 51.13
    rCSI 37.86%
    PRS 1.95
  • Langerhans cell CL0000453
    CSI 50.56
    rCSI 77.21%
    PRS 3.6
  • acinar cell CL0000622
    CSI 50.07
    rCSI 73.42%
    PRS 2.72
  • dendritic cell, human CL0001056
    CSI 49.93
    rCSI 76.69%
    PRS 2.38
  • conjunctival epithelial cell CL1000432
    CSI 49.67
    rCSI 75.86%
    PRS 2.07
  • elicited macrophage CL0000861
    CSI 49.38
    rCSI 45.33%
    PRS 2.35
  • ON-bipolar cell CL0000749
    CSI 48.17
    rCSI 71.6%
    PRS 2.76
  • effector CD8-positive, alpha-beta T cell CL0001050
    CSI 47.89
    rCSI 36.43%
    PRS 2.73
  • respiratory hillock cell CL4030023
    CSI 47.63
    rCSI 84.94%
    PRS 3.59
  • bronchus fibroblast of lung CL2000093
    CSI 47.6
    rCSI 38.67%
    PRS 2.16
  • radial glial cell CL0000681
    CSI 47.32
    rCSI 65.74%
    PRS 2.21
  • duct epithelial cell CL0000068
    CSI 46.97
    rCSI 68.72%
    PRS 2.17
  • CD8-positive, CD28-negative, alpha-beta regulatory T cell CL0000920
    CSI 46.2
    rCSI 92.1%
    PRS 3.58
  • plasmacytoid dendritic cell CL0000784
    CSI 45.77
    rCSI 46.36%
    PRS 13.89
  • dendritic cell CL0000451
    CSI 45.52
    rCSI 56.08%
    PRS 6.88
  • promonocyte CL0000559
    CSI 45.25
    rCSI 77.52%
    PRS 2.74
  • pancreatic ductal cell CL0002079
    CSI 45.14
    rCSI 87.78%
    PRS 2.1
  • small pre-B-II cell CL0000954
    CSI 45.01
    rCSI 43.28%
    PRS 4.49
  • hematopoietic precursor cell CL0008001
    CSI 44.94
    rCSI 46.24%
    PRS 3.35
  • glioblast CL0000030
    CSI 44.66
    rCSI 71.24%
    PRS 1.82
  • activated CD4-positive, alpha-beta T cell CL0000896
    CSI 43.43
    rCSI 40.15%
    PRS 3.77
  • mucus secreting cell CL0000319
    CSI 43.17
    rCSI 68.56%
    PRS 2.69
  • nasal mucosa goblet cell CL0002480
    CSI 42.88
    rCSI 49.73%
    PRS 3.07
  • sst GABAergic cortical interneuron CL4023017
    CSI -43.4
    rCSI -56.0%
    PRS 1.4%
  • alpha-beta T cell CL0000789
    CSI -42.1
    rCSI -49.3%
    PRS 3.5%
  • VIP GABAergic cortical interneuron CL4023016
    CSI -39.5
    rCSI -47.2%
    PRS 1.4%
  • kidney interstitial alternatively activated macrophage CL1000695
    CSI -36.1
    rCSI -94.0%
    PRS 2.6%
  • pvalb GABAergic cortical interneuron CL4023018
    CSI -33.2
    rCSI -41.3%
    PRS 1.2%
  • retinal bipolar neuron CL0000748
    CSI -25.1
    rCSI -47.0%
    PRS 1.7%
  • pulmonary capillary endothelial cell CL4028001
    CSI -24.6
    rCSI -46.9%
    PRS 3.3%
  • Schwann cell CL0002573
    CSI -18.7
    rCSI -53.0%
    PRS 2.9%
  • vascular leptomeningeal cell CL4023051
    CSI -18.4
    rCSI -32.3%
    PRS 1.7%
  • platelet CL0000233
    CSI -17.8
    rCSI -74.0%
    PRS 6.5%
  • cardiac endothelial cell CL0010008
    CSI -17.1
    rCSI -68.9%
    PRS 2.5%
  • lung interstitial macrophage CL4033043
    CSI -16.4
    rCSI -36.8%
    PRS 5.4%
  • L2/3 intratelencephalic projecting glutamatergic neuron CL4030059
    CSI -13.8
    rCSI -30.0%
    PRS 0.6%
  • endocardial cell CL0002350
    CSI -13.8
    rCSI -65.9%
    PRS 3.7%
  • cerebral cortex neuron CL0010012
    CSI -13.4
    rCSI -54.4%
    PRS 2.9%
  • mature astrocyte CL0002627
    CSI -12.2
    rCSI -51.8%
    PRS 5.4%
  • astrocyte of the cerebral cortex CL0002605
    CSI -11.8
    rCSI -26.4%
    PRS 1.4%
  • regular ventricular cardiac myocyte CL0002131
    CSI -11.6
    rCSI -72.5%
    PRS 1.7%
  • sncg GABAergic cortical interneuron CL4023015
    CSI -11.5
    rCSI -18.6%
    PRS 1.6%
  • lung pericyte CL0009089
    CSI -11.1
    rCSI -29.3%
    PRS 2.5%
  • neural cell CL0002319
    CSI -11.0
    rCSI -41.5%
    PRS 4.9%
  • inhibitory interneuron CL0000498
    CSI -10.7
    rCSI -24.8%
    PRS 2.1%
  • squamous epithelial cell CL0000076
    CSI -9.4
    rCSI -22.2%
    PRS 2.8%
  • microglial cell CL0000129
    CSI -9.2
    rCSI -37.1%
    PRS 10.4%
  • endothelial cell of periportal hepatic sinusoid CL0019021
    CSI -9.2
    rCSI -42.2%
    PRS 8.3%
  • central nervous system neuron CL2000029
    CSI -9.2
    rCSI -67.3%
    PRS 0.9%
  • lamp5 GABAergic cortical interneuron CL4023011
    CSI -8.9
    rCSI -15.0%
    PRS 1.3%
  • kidney collecting duct principal cell CL1001431
    CSI -7.7
    rCSI -38.9%
    PRS 14.5%
  • inflammatory macrophage CL0000863
    CSI -7.4
    rCSI -12.7%
    PRS 4.3%
  • exhausted T cell CL0011025
    CSI -7.3
    rCSI -100.0%
    PRS 11.7%
  • renal interstitial pericyte CL1001318
    CSI -6.7
    rCSI -18.4%
    PRS 2.4%
  • cardiac neuron CL0010022
    CSI -6.5
    rCSI -20.9%
    PRS 1.4%
  • chandelier pvalb GABAergic cortical interneuron CL4023036
    CSI -5.9
    rCSI -18.5%
    PRS 1.6%
  • caudal ganglionic eminence derived cortical interneuron CL4023064
    CSI -5.8
    rCSI -10.2%
    PRS 1.3%
  • suprabasal keratinocyte CL4033013
    CSI -5.6
    rCSI -9.2%
    PRS 1.6%
  • alveolar type 1 fibroblast cell CL4028004
    CSI -5.3
    rCSI -5.8%
    PRS 2.4%
  • cord blood hematopoietic stem cell CL2000095
    CSI -5.3
    rCSI -100.0%
    PRS 18.2%
  • differentiation-committed oligodendrocyte precursor CL4023059
    CSI -5.3
    rCSI -9.6%
    PRS 2.4%
  • hepatic stellate cell CL0000632
    CSI -4.7
    rCSI -17.5%
    PRS 1.8%
  • L6b glutamatergic cortical neuron CL4023038
    CSI -4.7
    rCSI -14.6%
    PRS 1.4%
  • professional antigen presenting cell CL0000145
    CSI -4.0
    rCSI -13.9%
    PRS 9.6%
  • cell of skeletal muscle CL0000188
    CSI -3.6
    rCSI -39.3%
    PRS 15.1%
  • diffuse bipolar 3a cell CL4033029
    CSI -2.9
    rCSI -20.0%
    PRS 5.1%
  • hepatic pit cell CL2000054
    CSI -2.9
    rCSI -39.1%
    PRS 25.5%
  • erythroid lineage cell CL0000764
    CSI -2.8
    rCSI -17.9%
    PRS 5.9%
  • lung resident memory CD4-positive, alpha-beta T cell CL4033038
    CSI -2.7
    rCSI -26.1%
    PRS 27.1%
  • adipocyte CL0000136
    CSI -2.5
    rCSI -3.2%
    PRS 2.7%
  • H2 horizontal cell CL0004218
    CSI -1.4
    rCSI -7.0%
    PRS 4.1%
  • kidney granular cell CL0000648
    CSI -1.4
    rCSI -20.1%
    PRS 25.3%
  • mast cell CL0000097
    CSI -1.1
    rCSI -2.4%
    PRS 12.5%
  • kidney resident macrophage CL1000698
    CSI -1.1
    rCSI -21.1%
    PRS 51.6%
  • H1 horizontal cell CL0004217
    CSI -1.1
    rCSI -4.2%
    PRS 5.8%
  • cerebral cortex endothelial cell CL1001602
    CSI -0.5
    rCSI -0.9%
    PRS 1.6%
  • kidney collecting duct intercalated cell CL1001432
    CSI -0.4
    rCSI -2.9%
    PRS 9.6%
  • indirect pathway medium spiny neuron CL4023029
    CSI -0.3
    rCSI -6.7%
    PRS 1.5%
  • primordial germ cell CL0000670
    CSI -0.2
    rCSI -1.1%
    PRS 16.9%
  • GABAergic amacrine cell CL4030027
    CSI -0.2
    rCSI -0.7%
    PRS 3.0%
  • tracheobronchial goblet cell CL0019003
    CSI 0.1
    rCSI 1.6%
    PRS 50.8%
  • effector CD4-positive, alpha-beta T cell CL0001044
    CSI 0.1
    rCSI 0.3%
    PRS 3.0%
  • immature innate lymphoid cell CL0001082
    CSI 0.2
    rCSI 4.6%
    PRS 37.1%
  • L2/3-6 intratelencephalic projecting glutamatergic neuron CL4023040
    CSI 0.4
    rCSI 0.9%
    PRS 1.3%
  • tissue-resident macrophage CL0000864
    CSI 0.4
    rCSI 2.0%
    PRS 6.0%
  • endothelial cell of vascular tree CL0002139
    CSI 0.5
    rCSI 2.8%
    PRS 5.6%
  • osteoblast CL0000062
    CSI 0.6
    rCSI 15.0%
    PRS 20.6%
  • L4 intratelencephalic projecting glutamatergic neuron CL4030063
    CSI 0.7
    rCSI 1.6%
    PRS 1.2%
  • eye photoreceptor cell CL0000287
    CSI 0.8
    rCSI 9.2%
    PRS 8.7%
  • cone retinal bipolar cell CL0000752
    CSI 0.8
    rCSI 10.9%
    PRS 14.7%
  • near-projecting glutamatergic cortical neuron CL4023012
    CSI 0.9
    rCSI 3.3%
    PRS 1.4%
  • corticothalamic-projecting glutamatergic cortical neuron CL4023013
    CSI 1.0
    rCSI 5.7%
    PRS 1.6%
  • enteroglial cell CL4040002
    CSI 1.0
    rCSI 5.2%
    PRS 5.4%
  • ON parasol ganglion cell CL4033052
    CSI 1.4
    rCSI 19.9%
    PRS 1.7%
  • immature alpha-beta T cell CL0000790
    CSI 1.5
    rCSI 21.4%
    PRS 34.3%
  • brush cell CL0002204
    CSI 1.5
    rCSI 3.1%
    PRS 6.1%
  • L5 extratelencephalic projecting glutamatergic cortical neuron CL4023041
    CSI 1.6
    rCSI 5.7%
    PRS 1.1%
  • epithelial cell of proximal tubule segment 3 CL4030011
    CSI 1.8
    rCSI 14.7%
    PRS 29.8%
  • NKp44-negative group 3 innate lymphoid cell, human CL0001080
    CSI 1.9
    rCSI 59.7%
    PRS 29.0%
  • endothelial cell of arteriole CL1000412
    CSI 2.0
    rCSI 11.0%
    PRS 11.1%
  • cytotoxic T cell CL0000910
    CSI 2.0
    rCSI 11.6%
    PRS 3.3%
  • basal cell of epidermis CL0002187
    CSI 2.1
    rCSI 3.7%
    PRS 2.9%
  • renal intercalated cell CL0005010
    CSI 2.1
    rCSI 18.7%
    PRS 20.5%
  • retinal ganglion cell CL0000740
    CSI 2.2
    rCSI 4.8%
    PRS 1.6%
  • odontoblast CL0000060
    CSI 2.2
    rCSI 50.4%
    PRS 12.5%
  • parietal epithelial cell CL1000452
    CSI 2.2
    rCSI 6.0%
    PRS 2.2%
  • tracheobronchial smooth muscle cell CL0019019
    CSI 2.2
    rCSI 3.9%
    PRS 2.8%
  • OFF midget ganglion cell CL4033047
    CSI 2.4
    rCSI 48.3%
    PRS 2.8%
  • forebrain neuroblast CL1000042
    CSI 2.4
    rCSI 25.9%
    PRS 31.8%
  • slow muscle cell CL0000189
    CSI 2.5
    rCSI 33.3%
    PRS 28.8%
  • mesenchymal lymphangioblast CL0005021
    CSI 2.6
    rCSI 66.9%
    PRS 12.1%
  • decidual natural killer cell, human CL0002343
    CSI 2.6
    rCSI 26.6%
    PRS 19.9%
  • ON midget ganglion cell CL4033046
    CSI 2.7
    rCSI 55.3%
    PRS 2.6%
  • small intestine goblet cell CL1000495
    CSI 2.7
    rCSI 6.0%
    PRS 2.9%
  • intermediate monocyte CL0002393
    CSI 2.8
    rCSI 4.3%
    PRS 2.0%
  • smooth muscle cell of the pulmonary artery CL0002591
    CSI 3.0
    rCSI 22.6%
    PRS 12.2%
  • kidney loop of Henle epithelial cell CL1000909
    CSI 3.0
    rCSI 63.1%
    PRS 19.2%
  • lung microvascular endothelial cell CL2000016
    CSI 3.0
    rCSI 58.6%
    PRS 7.6%
  • pluripotent stem cell CL0002248
    CSI 3.2
    rCSI 96.2%
    PRS 5.4%
  • renal principal cell CL0005009
    CSI 3.2
    rCSI 8.3%
    PRS 3.1%
  • rod bipolar cell CL0000751
    CSI 3.2
    rCSI 5.8%
    PRS 1.8%
  • Merkel cell CL0000242
    CSI 3.4
    rCSI 78.0%
    PRS 15.5%
  • stratified epithelial cell CL0000079
    CSI 3.5
    rCSI 21.5%
    PRS 10.7%

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Network Configuration

Explore relationships of the current gene. Select an Interaction Source: 'ONTOLOGY' for shared pathways (GO/Reactome) or 'STRING' for protein-protein interactions. Further refine by selecting context genes and comparing Cell Significance Index (CSI) scores between baseline and target cell types and their specific contexts.

Comma-separated if multiple.
Comma-separated if multiple.

Legend:
  • Query Gene
  • Node Color (Target Cell CSI, relative to current network):
    • Very High
    • High
    • Medium
    • Low
    • Very Low
    • CSI N/A
  • Node Size: Proportional to Target Cell CSI magnitude
  • STRING PPI Edge
  • Shared Pathway Edge (ONTOLOGY)

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Other Information

This section provides additional information about the gene, including a description generated by an AI language model and details about associated proteins.

## Summary [HINT1](/details-gene/3094) (Histidine Triad Nucleotide Binding Protein 1) is a protein-coding gene located on chromosome 5q23.3. It belongs to the highly conserved histidine triad (HIT) family of proteins, characterized by their nucleotide-binding capacity and hydrolase activity. Specifically, [HINT1](/details-gene/3094) functions as an [adenosine 5'-monophosphoramidase](/details-go/GO:0043530), cleaving phosphoramidate bonds. Beyond its enzymatic role, it is implicated in a wide range of cellular processes, including [signal transduction](/details-go/GO:0007165), [regulation of dna-templated transcription](/details-go/GO:0006355), and the [intrinsic apoptotic signaling pathway](/details-go/GO:0072332). Expression data reveals its high significance in diverse cell populations, most notably hematopoietic stem and progenitor cells, various subsets of T lymphocytes, and multiple types of epithelial cells, suggesting a fundamental role in cell proliferation, differentiation, and homeostasis. Clinical associations for this gene are noted in OMIM ([137200](https://omim.org/entry/137200), [601314](https://omim.org/entry/601314)). ## Cellular Roles and Expression Landscape **Overall**, the expression profile of [HINT1](/details-gene/3094) highlights its importance in highly proliferative and differentiating cell lineages, particularly within the hematopoietic system. The gene shows its highest significance in [hematopoietic stem cell](/details-cell/CL0000037) (CSI: 142.69) and a cascade of downstream progenitors, including [common myeloid progenitor](/details-cell/CL0000049), [granulocyte monocyte progenitor cell](/details-cell/CL0000557), and [megakaryocyte-erythroid progenitor cell](/details-cell/CL0000050). This pattern strongly suggests a role in the maintenance and early differentiation decisions of the blood system. In the adaptive immune system, [HINT1](/details-gene/3094) is a significant gene in several key lymphocyte populations. It is highly ranked in [plasmacytoid dendritic cell, human](/details-cell/CL0001058), [central memory CD8-positive, alpha-beta T cell](/details-cell/CL0000907), and [central memory CD4-positive, alpha-beta T cell](/details-cell/CL0000904), indicating a potential function in antigen presentation and the maintenance of immunological memory. Its high significance in [plasmablast](/details-cell/CL0000980) further points to a role during the terminal differentiation of B cells. Beyond the immune system, [HINT1](/details-gene/3094) is also prominently expressed in various epithelial tissues, including [keratinocyte](/details-cell/CL0000312), [ciliated epithelial cell](/details-cell/CL0000067), and [epithelial cell of lung](/details-cell/CL0000082). This broad expression pattern suggests that its function in regulating transcription and apoptosis is not restricted to one lineage but is a more general mechanism utilized by diverse cell types. Conversely, the gene's significance is markedly low in terminally differentiated cells of the nervous system, such as [sst GABAergic cortical interneuron](/details-cell/CL4023017) and [retinal bipolar neuron](/details-cell/CL0000748), as well as in endothelial cells like [pulmonary capillary endothelial cell](/details-cell/CL4028001). This pattern of expression and anti-expression defines [HINT1](/details-gene/3094) as a protein primarily involved in dynamic cellular processes like differentiation and renewal, rather than the static maintenance of post-mitotic tissues. ## Pathways and Molecular Function The functional annotations for [HINT1](/details-gene/3094) are consistent with its widespread importance in cellular regulation. Its core molecular function is characterized as a [hydrolase activity](/details-go/GO:0016787), specifically as an [adenosine 5'-monophosphoramidase activity](/details-go/GO:0043530). This enzymatic function is complemented by its ability to participate in [protein binding](/details-go/GO:0005515), including a noted interaction with protein kinase C ([protein kinase c binding](/details-go/GO:0005080)) [Link](https://doi.org/10.1073/pnas.92.17.7824). At the biological process level, [HINT1](/details-gene/3094) is involved in fundamental pathways controlling cell fate. Its role in the [intrinsic apoptotic signaling pathway by p53 class mediator](/details-go/GO:0072332) is particularly relevant to its high expression in progenitor cells and lymphocytes, where apoptosis is a critical regulatory mechanism. One study suggests this pro-apoptotic function may be independent of its enzymatic activity [Link](https://doi.org/10.1074/jbc.m513452200). Furthermore, its participation in the [regulation of dna-templated transcription](/details-go/GO:0006355) aligns with its interaction with transcription factors and its presence in the [nucleus](/details-go/GO:0005634) and [histone deacetylase complex](/details-go/GO:0000118). Reactome pathway analysis highlights a specific role in melanocyte development through the regulation of MITF-M transcription factor activity, such as in [Mitf-m-dependent gene expression](/details-pathway/R-HSA-9856651) and [Regulation of mitf-m-dependent genes involved in apoptosis](/details-pathway/R-HSA-9824594). This suggests that while broadly expressed, [HINT1](/details-gene/3094) can be recruited to regulate highly specific differentiation programs. ## Research Directions The widespread yet distinct expression pattern of [HINT1](/details-gene/3094), coupled with its multifaceted functions in apoptosis and transcription, opens up several avenues for future investigation. Its prominent role in both the maintenance of stemness and the function of mature immune cells warrants deeper exploration. Based on the available data, several testable hypotheses can be proposed: 1. **Hypothesis 1:** [HINT1](/details-gene/3094) is a critical regulator of hematopoietic stem cell (HSC) fate, where its loss leads to impaired self-renewal and skewed differentiation due to dysregulated apoptosis and transcriptional control. 2. **Hypothesis 2:** In central memory T cells, [HINT1](/details-gene/3094) acts as a metabolic checkpoint or survival factor, sustaining the long-term viability of these cells by modulating signaling pathways downstream of the T cell receptor and cytokines. A key experiment to test the first hypothesis would involve the use of a conditional knockout mouse model. Specifically, generating mice with a floxed *Hint1* allele crossed with Vav1-Cre mice would allow for hematopoietic-specific deletion of the gene. The impact on HSCs could be assessed through competitive bone marrow transplantation assays, where knockout and wild-type bone marrow are co-transferred into irradiated recipients. Subsequent analysis of donor-derived cell populations in peripheral blood and bone marrow over time would reveal defects in long-term self-renewal and lineage contribution. Further mechanistic insight could be gained by performing single-cell RNA sequencing on HSCs from these mice to identify the transcriptional programs regulated by [HINT1](/details-gene/3094). From a therapeutic standpoint, [HINT1](/details-gene/3094)'s broad expression in essential healthy tissues, including hematopoietic progenitors, presents a significant challenge for systemic targeting. Inhibition could risk severe hematological or immunological toxicity. However, its role in apoptosis suggests it could function as a context-dependent tumor suppressor or oncogene. If certain cancers become dependent on the down-regulation of [HINT1](/details-gene/3094) to evade apoptosis, developing small molecules that restore its function or mimic its pro-apoptotic activity could be a viable therapeutic strategy. Conversely, if a malignancy relies on [HINT1](/details-gene/3094) for survival, targeted inhibition might be effective, though delivery would need to be highly specific to cancer cells.

Genular Protein ID: 3387687506

Symbol: HINT1_HUMAN

Name: Histidine triad nucleotide-binding protein 1

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 8812426

Title: Cloning, mapping, and in vivo localization of a human member of the PKCI-1 protein family (PRKCNH1).

PubMed ID: 8812426

DOI: 10.1006/geno.1996.0435

PubMed ID: 7644499

Title: The product of the ataxia-telangiectasia group D complementing gene, ATDC, interacts with a protein kinase C substrate and inhibitor.

PubMed ID: 7644499

DOI: 10.1073/pnas.92.17.7824

PubMed ID: 14702039

Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.

PubMed ID: 14702039

DOI: 10.1038/ng1285

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 8643579

Title: Three-dimensional structure of human protein kinase C interacting protein 1, a member of the HIT family of proteins.

PubMed ID: 8643579

DOI: 10.1073/pnas.93.11.5357

PubMed ID: 12665801

Title: Exploring proteomes and analyzing protein processing by mass spectrometric identification of sorted N-terminal peptides.

PubMed ID: 12665801

DOI: 10.1038/nbt810

PubMed ID: 9770345

Title: Characterization of PKCI and comparative studies with FHIT, related members of the HIT protein family.

PubMed ID: 9770345

DOI: 10.1006/excr.1998.4153

PubMed ID: 10958787

Title: Interactions of Cdk7 and Kin28 with Hint/PKCI-1 and Hnt1 histidine triad proteins.

PubMed ID: 10958787

DOI: 10.1074/jbc.c000505200

PubMed ID: 15703176

Title: 31P NMR and genetic analysis establish hinT as the only Escherchia coli purine nucleoside phosphoramidase and as essential for growth under high salt conditions.

PubMed ID: 15703176

DOI: 10.1074/jbc.m500434200

PubMed ID: 16014379

Title: The histidine triad protein Hint1 interacts with Pontin and Reptin and inhibits TCF-beta-catenin-mediated transcription.

PubMed ID: 16014379

DOI: 10.1242/jcs.02437

PubMed ID: 16835243

Title: The histidine triad protein Hint1 triggers apoptosis independent of its enzymatic activity.

PubMed ID: 16835243

DOI: 10.1074/jbc.m513452200

PubMed ID: 17337452

Title: Engineered monomeric human histidine triad nucleotide-binding protein 1 hydrolyzes fluorogenic acyl-adenylate and lysyl-tRNA synthetase-generated lysyl-adenylate.

PubMed ID: 17337452

DOI: 10.1074/jbc.m606972200

PubMed ID: 17217311

Title: Phosphoramidate pronucleotides: a comparison of the phosphoramidase substrate specificity of human and Escherichia coli histidine triad nucleotide binding proteins.

PubMed ID: 17217311

DOI: 10.1021/mp060070y

PubMed ID: 19112177

Title: Histidine triad nucleotide-binding protein 1 up-regulates cellular levels of p27KIP1 by targeting ScfSKP2 ubiquitin ligase and Src.

PubMed ID: 19112177

DOI: 10.1074/jbc.m804531200

PubMed ID: 19608861

Title: Lysine acetylation targets protein complexes and co-regulates major cellular functions.

PubMed ID: 19608861

DOI: 10.1126/science.1175371

PubMed ID: 21269460

Title: Initial characterization of the human central proteome.

PubMed ID: 21269460

DOI: 10.1186/1752-0509-5-17

PubMed ID: 22647378

Title: The tumor suppressor HINT1 regulates MITF and beta-catenin transcriptional activity in melanoma cells.

PubMed ID: 22647378

DOI: 10.4161/cc.20765

PubMed ID: 22814378

Title: N-terminal acetylome analyses and functional insights of the N-terminal acetyltransferase NatB.

PubMed ID: 22814378

DOI: 10.1073/pnas.1210303109

PubMed ID: 23614568

Title: Kinetic mechanism of human histidine triad nucleotide binding protein 1.

PubMed ID: 23614568

DOI: 10.1021/bi301616c

PubMed ID: 24275569

Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.

PubMed ID: 24275569

DOI: 10.1016/j.jprot.2013.11.014

PubMed ID: 28691797

Title: Caught before Released: Structural Mapping of the Reaction Trajectory for the Sofosbuvir Activating Enzyme, Human Histidine Triad Nucleotide Binding Protein 1 (hHint1).

PubMed ID: 28691797

DOI: 10.1021/acs.biochem.7b00148

PubMed ID: 29787766

Title: Structure and Functional Characterization of Human Histidine Triad Nucleotide-Binding Protein 1 Mutations Associated with Inherited Axonal Neuropathy with Neuromyotonia.

PubMed ID: 29787766

DOI: 10.1016/j.jmb.2018.05.028

PubMed ID: 31088288

Title: The Axonal Motor Neuropathy-Related HINT1 Protein Is a Zinc- and Calmodulin-Regulated Cysteine SUMO Protease.

PubMed ID: 31088288

DOI: 10.1089/ars.2019.7724

PubMed ID: 30772266

Title: The role of the Hint1 protein in the metabolism of phosphorothioate oligonucleotides drugs and prodrugs, and the release of H2S under cellular conditions.

PubMed ID: 30772266

DOI: 10.1016/j.bcp.2019.02.018

PubMed ID: 31990367

Title: Histidine triad nucleotide-binding proteins HINT1 and HINT2 share similar substrate specificities and little affinity for the signaling dinucleotide Ap4A.

PubMed ID: 31990367

DOI: 10.1002/1873-3468.13745

PubMed ID: 9323207

Title: Structure-based analysis of catalysis and substrate definition in the HIT protein family.

PubMed ID: 9323207

DOI: 10.1126/science.278.5336.286

PubMed ID: 22869114

Title: A new crystal form of human histidine triad nucleotide-binding protein 1 (hHINT1) in complex with adenosine 5'-monophosphate at 1.38 A resolution.

PubMed ID: 22869114

DOI: 10.1107/s1744309112029491

PubMed ID: 22329685

Title: Side chain independent recognition of aminoacyl adenylates by the Hint1 transcription suppressor.

PubMed ID: 22329685

DOI: 10.1021/jp212457w

PubMed ID: 22961002

Title: Loss-of-function mutations in HINT1 cause axonal neuropathy with neuromyotonia.

PubMed ID: 22961002

DOI: 10.1038/ng.2406

Sequence Information:

  • Length: 126
  • Mass: 13802
  • Checksum: 6C2B0119370384AA
  • Sequence:
  • MADEIAKAQV ARPGGDTIFG KIIRKEIPAK IIFEDDRCLA FHDISPQAPT HFLVIPKKHI 
    SQISVAEDDD ESLLGHLMIV GKKCAADLGL NKGYRMVVNE GSDGGQSVYH VHLHVLGGRQ 
    MHWPPG