Details for: HLA DRB5

Gene ID: 3127

Symbol: HLA DRB5

Ensembl ID: ENSG00000198502

Description: major histocompatibility complex, class II, DR beta 5

Associated with

Cells (max top 100)

(Marker Score score is uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)

  • Cell Name: thymocyte (CL0000893)
    Fold Change: 5.37
    Marker Score: 5627
  • Cell Name: CD38-negative naive B cell (CL0002102)
    Fold Change: 4.36
    Marker Score: 9141
  • Cell Name: CD14-positive, CD16-positive monocyte (CL0002397)
    Fold Change: 3.52
    Marker Score: 6859
  • Cell Name: CD14-positive, CD16-negative classical monocyte (CL0002057)
    Fold Change: 3.13
    Marker Score: 174863
  • Cell Name: lung macrophage (CL1001603)
    Fold Change: 3.12
    Marker Score: 3571
  • Cell Name: naive B cell (CL0000788)
    Fold Change: 2.8
    Marker Score: 2497
  • Cell Name: IgG-negative class switched memory B cell (CL0002117)
    Fold Change: 2.76
    Marker Score: 2717
  • Cell Name: blood cell (CL0000081)
    Fold Change: 2.75
    Marker Score: 31960
  • Cell Name: tonsil germinal center B cell (CL2000006)
    Fold Change: 2.74
    Marker Score: 8135
  • Cell Name: small pre-B-II cell (CL0000954)
    Fold Change: 2.72
    Marker Score: 3268
  • Cell Name: alveolar macrophage (CL0000583)
    Fold Change: 2.68
    Marker Score: 68736
  • Cell Name: pneumocyte (CL0000322)
    Fold Change: 2.68
    Marker Score: 4309
  • Cell Name: alveolar capillary type 2 endothelial cell (CL4028003)
    Fold Change: 2.56
    Marker Score: 3701
  • Cell Name: CD1c-positive myeloid dendritic cell (CL0002399)
    Fold Change: 2.56
    Marker Score: 6622.5
  • Cell Name: B-1 B cell (CL0000819)
    Fold Change: 2.54
    Marker Score: 4430
  • Cell Name: alveolar capillary type 1 endothelial cell (CL4028002)
    Fold Change: 2.44
    Marker Score: 6211
  • Cell Name: type II pneumocyte (CL0002063)
    Fold Change: 2.31
    Marker Score: 15077
  • Cell Name: centrocyte (CL0009111)
    Fold Change: 2.31
    Marker Score: 550
  • Cell Name: mature gamma-delta T cell (CL0000800)
    Fold Change: 2.19
    Marker Score: 6923.5
  • Cell Name: B-1b B cell (CL0000821)
    Fold Change: 2.18
    Marker Score: 503
  • Cell Name: follicular B cell (CL0000843)
    Fold Change: 2.15
    Marker Score: 2330
  • Cell Name: non-classical monocyte (CL0000875)
    Fold Change: 2.12
    Marker Score: 5109
  • Cell Name: prostate gland microvascular endothelial cell (CL2000059)
    Fold Change: 2.11
    Marker Score: 821
  • Cell Name: CD14-positive monocyte (CL0001054)
    Fold Change: 2.11
    Marker Score: 5260
  • Cell Name: IgG memory B cell (CL0000979)
    Fold Change: 2.11
    Marker Score: 1269
  • Cell Name: pulmonary artery endothelial cell (CL1001568)
    Fold Change: 2.1
    Marker Score: 1808
  • Cell Name: class switched memory B cell (CL0000972)
    Fold Change: 2.09
    Marker Score: 1967
  • Cell Name: myelocyte (CL0002193)
    Fold Change: 2.09
    Marker Score: 902
  • Cell Name: duct epithelial cell (CL0000068)
    Fold Change: 2.09
    Marker Score: 975
  • Cell Name: enterocyte of colon (CL1000347)
    Fold Change: 2.05
    Marker Score: 3161
  • Cell Name: microglial cell (CL0000129)
    Fold Change: 2.05
    Marker Score: 3725
  • Cell Name: centroblast (CL0009112)
    Fold Change: 2.03
    Marker Score: 998
  • Cell Name: medullary thymic epithelial cell (CL0002365)
    Fold Change: 1.98
    Marker Score: 3243
  • Cell Name: vascular lymphangioblast (CL0005022)
    Fold Change: 1.95
    Marker Score: 3304
  • Cell Name: elicited macrophage (CL0000861)
    Fold Change: 1.91
    Marker Score: 11625
  • Cell Name: CD4-positive, alpha-beta memory T cell, CD45RO-positive (CL0001204)
    Fold Change: 1.89
    Marker Score: 12087
  • Cell Name: unswitched memory B cell (CL0000970)
    Fold Change: 1.85
    Marker Score: 1082
  • Cell Name: CD34-positive, CD38-negative hematopoietic stem cell (CL0001024)
    Fold Change: 1.83
    Marker Score: 1325
  • Cell Name: late pro-B cell (CL0002048)
    Fold Change: 1.8
    Marker Score: 2120
  • Cell Name: conventional dendritic cell (CL0000990)
    Fold Change: 1.79
    Marker Score: 1237
  • Cell Name: epithelial cell of lung (CL0000082)
    Fold Change: 1.75
    Marker Score: 9212
  • Cell Name: blood vessel endothelial cell (CL0000071)
    Fold Change: 1.68
    Marker Score: 1689
  • Cell Name: immature B cell (CL0000816)
    Fold Change: 1.67
    Marker Score: 1104
  • Cell Name: transitional stage B cell (CL0000818)
    Fold Change: 1.66
    Marker Score: 587
  • Cell Name: mucus secreting cell (CL0000319)
    Fold Change: 1.62
    Marker Score: 412
  • Cell Name: mature T cell (CL0002419)
    Fold Change: 1.6
    Marker Score: 15866
  • Cell Name: dendritic cell (CL0000451)
    Fold Change: 1.58
    Marker Score: 1082
  • Cell Name: endothelial cell of uterus (CL0009095)
    Fold Change: 1.57
    Marker Score: 3142
  • Cell Name: dendritic cell, human (CL0001056)
    Fold Change: 1.54
    Marker Score: 1566
  • Cell Name: large pre-B-II cell (CL0000957)
    Fold Change: 1.53
    Marker Score: 4155
  • Cell Name: alternatively activated macrophage (CL0000890)
    Fold Change: 1.52
    Marker Score: 634
  • Cell Name: CD4-positive, alpha-beta memory T cell (CL0000897)
    Fold Change: 1.52
    Marker Score: 890
  • Cell Name: enterocyte of epithelium of large intestine (CL0002071)
    Fold Change: 1.47
    Marker Score: 1461
  • Cell Name: mural cell (CL0008034)
    Fold Change: 1.45
    Marker Score: 166881
  • Cell Name: club cell (CL0000158)
    Fold Change: 1.45
    Marker Score: 1692
  • Cell Name: central nervous system macrophage (CL0000878)
    Fold Change: 1.43
    Marker Score: 713
  • Cell Name: pre-B-I cell (CL0000956)
    Fold Change: 1.42
    Marker Score: 364
  • Cell Name: plasmacytoid dendritic cell, human (CL0001058)
    Fold Change: 1.42
    Marker Score: 373
  • Cell Name: late promyelocyte (CL0002151)
    Fold Change: 1.41
    Marker Score: 354
  • Cell Name: lactocyte (CL0002325)
    Fold Change: 1.41
    Marker Score: 22591
  • Cell Name: Langerhans cell (CL0000453)
    Fold Change: 1.4
    Marker Score: 418
  • Cell Name: memory B cell (CL0000787)
    Fold Change: 1.38
    Marker Score: 1041
  • Cell Name: mucous neck cell (CL0000651)
    Fold Change: 1.35
    Marker Score: 3072
  • Cell Name: nasal mucosa goblet cell (CL0002480)
    Fold Change: 1.34
    Marker Score: 895
  • Cell Name: germinal center B cell (CL0000844)
    Fold Change: 1.33
    Marker Score: 810
  • Cell Name: mature B cell (CL0000785)
    Fold Change: 1.33
    Marker Score: 975
  • Cell Name: endothelial cell of vascular tree (CL0002139)
    Fold Change: 1.31
    Marker Score: 1909
  • Cell Name: CD8-positive, alpha-beta thymocyte (CL0000811)
    Fold Change: 1.31
    Marker Score: 721
  • Cell Name: osteoclast (CL0000092)
    Fold Change: 1.26
    Marker Score: 629
  • Cell Name: endothelial cell (CL0000115)
    Fold Change: 1.25
    Marker Score: 1123
  • Cell Name: ciliated cell (CL0000064)
    Fold Change: 1.25
    Marker Score: 4293.5
  • Cell Name: megakaryocyte progenitor cell (CL0000553)
    Fold Change: 1.24
    Marker Score: 346
  • Cell Name: Kupffer cell (CL0000091)
    Fold Change: 1.23
    Marker Score: 1232
  • Cell Name: vasa recta ascending limb cell (CL1001131)
    Fold Change: 1.23
    Marker Score: 325
  • Cell Name: B cell (CL0000236)
    Fold Change: 1.23
    Marker Score: 1168
  • Cell Name: macrophage (CL0000235)
    Fold Change: 1.21
    Marker Score: 1347
  • Cell Name: IgM plasma cell (CL0000986)
    Fold Change: 1.2
    Marker Score: 419
  • Cell Name: intestinal crypt stem cell (CL0002250)
    Fold Change: 1.18
    Marker Score: 444
  • Cell Name: common dendritic progenitor (CL0001029)
    Fold Change: 1.15
    Marker Score: 397
  • Cell Name: endothelial cell of artery (CL1000413)
    Fold Change: 1.13
    Marker Score: 469
  • Cell Name: double negative T regulatory cell (CL0011024)
    Fold Change: 1.12
    Marker Score: 1079
  • Cell Name: vein endothelial cell (CL0002543)
    Fold Change: 1.12
    Marker Score: 1008
  • Cell Name: hematopoietic stem cell (CL0000037)
    Fold Change: 1.1
    Marker Score: 579
  • Cell Name: monocyte (CL0000576)
    Fold Change: 1.1
    Marker Score: 1429
  • Cell Name: ciliated columnar cell of tracheobronchial tree (CL0002145)
    Fold Change: 1.08
    Marker Score: 9377
  • Cell Name: hematopoietic multipotent progenitor cell (CL0000837)
    Fold Change: 1.07
    Marker Score: 524.5
  • Cell Name: transit amplifying cell of small intestine (CL0009012)
    Fold Change: 1.05
    Marker Score: 435
  • Cell Name: classical monocyte (CL0000860)
    Fold Change: 1.03
    Marker Score: 4281
  • Cell Name: plasmacytoid dendritic cell (CL0000784)
    Fold Change: 1.03
    Marker Score: 554
  • Cell Name: hematopoietic precursor cell (CL0008001)
    Fold Change: 1.02
    Marker Score: 358
  • Cell Name: erythroid progenitor cell, mammalian (CL0001066)
    Fold Change: 1.02
    Marker Score: 326
  • Cell Name: B-1a B cell (CL0000820)
    Fold Change: 1.02
    Marker Score: 243
  • Cell Name: plasmablast (CL0000980)
    Fold Change: 1.01
    Marker Score: 1340
  • Cell Name: exhausted T cell (CL0011025)
    Fold Change: 1.01
    Marker Score: 579
  • Cell Name: cerebral cortex GABAergic interneuron (CL0010011)
    Fold Change: 1
    Marker Score: 71670
  • Cell Name: forebrain radial glial cell (CL0013000)
    Fold Change: 0.99
    Marker Score: 47898
  • Cell Name: immature innate lymphoid cell (CL0001082)
    Fold Change: 0.99
    Marker Score: 2013
  • Cell Name: absorptive cell (CL0000212)
    Fold Change: 0.98
    Marker Score: 30392
  • Cell Name: multi-ciliated epithelial cell (CL0005012)
    Fold Change: 0.98
    Marker Score: 1857
  • Cell Name: tuft cell of colon (CL0009041)
    Fold Change: 0.96
    Marker Score: 495

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Other Information

**Key characteristics:** * DRB5 is a type I transmembrane protein with a molecular weight of approximately 110 kDa. * It is expressed on the surface of professional antigen-presenting cells, such as macrophages and dendritic cells. * DRB5 is classified as a member of the HLA class II histocompatibility complex, which is responsible for presenting antigens to T cells. * The DRB5 gene is highly conserved across different species. **Pathways and functions:** * DRB5 is expressed on the surface of professional antigen-presenting cells. * Upon antigen binding, DRB5 complex is presented on the surface of antigen-presenting cells. * This allows T cells to recognize and interact with antigen-presenting cells. * DRB5 is involved in the adaptive immune response, helping to regulate the activation and differentiation of T cells. * It plays a role in the generation of second messenger molecules, such as cytokines, which can influence the immune response. **Clinical significance:** * Mutations in the DRB5 gene have been linked to several autoimmune disorders, including systemic sclerosis, rheumatoid arthritis, and lupus. * DRB5 is a potential target for immunotherapy in these diseases. * DRB5 inhibitors are being investigated as a therapeutic approach to autoimmune diseases.

Genular Protein ID: 4103405283

Symbol: DRB5_HUMAN

Name: HLA class II histocompatibility antigen, DR beta 5 chain

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 3099214

Title: Polymorphism of human Ia antigens generated by reciprocal intergenic exchange between two DR beta loci.

PubMed ID: 3099214

DOI: 10.1038/324676a0

PubMed ID: 3571980

Title: cDNA cloning and sequencing reveals that the electrophoretically constant DR beta 2 molecules, as well as the variable DR beta 1 molecules, from HLA-DR2 subtypes have different amino acid sequences including a hypervariable region for a functionally important epitope.

PubMed ID: 3571980

PubMed ID: 3259543

Title: MHC class II sequences of an HLA-DR2 narcoleptic.

PubMed ID: 3259543

DOI: 10.1007/bf00364432

PubMed ID: 2001975

Title: A novel DRB1 allele in DR2-positive American blacks.

PubMed ID: 2001975

DOI: 10.1016/0198-8859(91)90069-l

PubMed ID: 14702039

Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.

PubMed ID: 14702039

DOI: 10.1038/ng1285

PubMed ID: 14574404

Title: The DNA sequence and analysis of human chromosome 6.

PubMed ID: 14574404

DOI: 10.1038/nature02055

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 9162096

Title: Diversity associated with the second expressed HLA-DRB locus in the human population.

PubMed ID: 9162096

DOI: 10.1007/s002510050248

PubMed ID: 2885840

Title: HLA-DR2 subtypes form an additional supertypic family of DR beta alleles.

PubMed ID: 2885840

DOI: 10.1073/pnas.84.13.4591

PubMed ID: 3476943

Title: Allelic variation in the DR subregion of the human major histocompatibility complex.

PubMed ID: 3476943

DOI: 10.1073/pnas.84.17.6234

PubMed ID: 6576979

Title: Primary structure of human class II histocompatibility antigens 3rd communication. Amino acid sequence comparison between DR and DC subclass antigens derived from a lymphoblastoid B cell line homozygous at the HLA loci (HLA-A3,3; B7,7; Dw2,2; DR2,2: MT1,1; Dc1,1: MB1,1).

PubMed ID: 6576979

DOI: 10.1515/bchm2.1983.364.1.749

PubMed ID: 8773325

Title: Characterization of a new HLA-DRB5 allele (DRB5*0105) by PCR-SSP and direct sequencing.

PubMed ID: 8773325

DOI: 10.1111/j.1399-0039.1996.tb02563.x

PubMed ID: 9226128

Title: Sequence of a new HLA-DR allele, DRB5*0106.

PubMed ID: 9226128

DOI: 10.1111/j.1365-2370.1997.00267.x

PubMed ID: 14617041

Title: Identification of a new HLA-DRB5 allele, DRB5*0112, by routine PCR-SSP.

PubMed ID: 14617041

DOI: 10.1046/j.1399-0039.2003.00124.x

PubMed ID: 16671952

Title: Identification of a new allele, HLA-DRB5*0113, through three different molecular biology techniques.

PubMed ID: 16671952

DOI: 10.1111/j.1399-0039.2006.00588.x

PubMed ID: 9458128

Title: Identification of novel DRB1*11 (DRB1*11013, DRB1*1129), DRB1*08 (DRB1*0816) and DRB5* (DRB5*0107) alleles.

PubMed ID: 9458128

DOI: 10.1111/j.1399-0039.1997.tb02933.x

PubMed ID: 9694360

Title: Identification of novel DRB1*13 (DRB1*1333), DRB1*04 (DRB1*0426) and DRB5* (DRB5*0109) alleles.

PubMed ID: 9694360

DOI: 10.1111/j.1399-0039.1998.tb03010.x

PubMed ID: 1471145

Title: DRB5*HK: a new HLA-DRB5 allele in Cantonese.

PubMed ID: 1471145

DOI: 10.1111/j.1399-0039.1992.tb02047.x

PubMed ID: 8598037

Title: Invariant chain structure and MHC class II function.

PubMed ID: 8598037

DOI: 10.1016/s0092-8674(00)81025-9

PubMed ID: 11684289

Title: Presentation of antigens by MHC class II molecules: getting the most out of them.

PubMed ID: 11684289

DOI: 10.1016/s0161-5890(01)00069-4

PubMed ID: 17241953

Title: Autophagy in MHC class II presentation: sampling from within.

PubMed ID: 17241953

DOI: 10.1016/j.immuni.2007.01.005

PubMed ID: 18046453

Title: MHC class II molecules on the move for successful antigen presentation.

PubMed ID: 18046453

DOI: 10.1038/sj.emboj.7601945

PubMed ID: 18305173

Title: MHC class II stabilization at the surface of human dendritic cells is the result of maturation-dependent MARCH I down-regulation.

PubMed ID: 18305173

DOI: 10.1073/pnas.0708874105

PubMed ID: 19092054

Title: MHC class II transport at a glance.

PubMed ID: 19092054

DOI: 10.1242/jcs.035089

PubMed ID: 19533806

Title: CD74 in antigen presentation, inflammation, and cancers of the gastrointestinal tract.

PubMed ID: 19533806

DOI: 10.3748/wjg.15.2855

PubMed ID: 19159218

Title: Glycoproteomics analysis of human liver tissue by combination of multiple enzyme digestion and hydrazide chemistry.

PubMed ID: 19159218

DOI: 10.1021/pr8008012

PubMed ID: 21269460

Title: Initial characterization of the human central proteome.

PubMed ID: 21269460

DOI: 10.1186/1752-0509-5-17

PubMed ID: 11080454

Title: Structural basis for the binding of an immunodominant peptide from myelin basic protein in different registers by two HLA-DR2 proteins.

PubMed ID: 11080454

DOI: 10.1006/jmbi.2000.4198

PubMed ID: 11163233

Title: Crystal structure of a superantigen bound to the high-affinity, zinc-dependent site on MHC class II.

PubMed ID: 11163233

DOI: 10.1016/s1074-7613(01)00092-9

PubMed ID: 12244309

Title: A functional and structural basis for TCR cross-reactivity in multiple sclerosis.

PubMed ID: 12244309

DOI: 10.1038/ni835

PubMed ID: 16079912

Title: Structure of a human autoimmune TCR bound to a myelin basic protein self-peptide and a multiple sclerosis-associated MHC class II molecule.

PubMed ID: 16079912

DOI: 10.1038/sj.emboj.7600771

Sequence Information:

  • Length: 266
  • Mass: 30056
  • Checksum: 0D4335BAEEA6AF22
  • Sequence:
  • MVCLKLPGGS YMAKLTVTLM VLSSPLALAG DTRPRFLQQD KYECHFFNGT ERVRFLHRDI 
    YNQEEDLRFD SDVGEYRAVT ELGRPDAEYW NSQKDFLEDR RAAVDTYCRH NYGVGESFTV 
    QRRVEPKVTV YPARTQTLQH HNLLVCSVNG FYPGSIEVRW FRNSQEEKAG VVSTGLIQNG 
    DWTFQTLVML ETVPRSGEVY TCQVEHPSVT SPLTVEWRAQ SESAQSKMLS GVGGFVLGLL 
    FLGAGLFIYF KNQKGHSGLH PTGLVS

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. For the full schema, download it here.