Details for: MC1R
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: polychromatophilic erythroblast (CL0000550)
Fold Change: 28.7376
Cell Significance Index: -4.4700 - Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
Fold Change: 17.7809
Cell Significance Index: -4.5100 - Cell Name: orthochromatic erythroblast (CL0000552)
Fold Change: 3.6619
Cell Significance Index: -4.5200 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: 0.5171
Cell Significance Index: 26.8600 - Cell Name: paneth cell of epithelium of small intestine (CL1000343)
Fold Change: 0.2954
Cell Significance Index: 6.4000 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 0.2872
Cell Significance Index: 259.3200 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: 0.2717
Cell Significance Index: 78.1900 - Cell Name: cone retinal bipolar cell (CL0000752)
Fold Change: 0.2374
Cell Significance Index: 1.8300 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: 0.2261
Cell Significance Index: 6.5200 - Cell Name: epithelial cell of pancreas (CL0000083)
Fold Change: 0.2197
Cell Significance Index: 3.6200 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: 0.2165
Cell Significance Index: 5.8000 - Cell Name: GABAergic amacrine cell (CL4030027)
Fold Change: 0.1983
Cell Significance Index: 2.4600 - Cell Name: colon goblet cell (CL0009039)
Fold Change: 0.1659
Cell Significance Index: 16.4100 - Cell Name: decidual cell (CL2000002)
Fold Change: 0.1658
Cell Significance Index: 2.6600 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: 0.1437
Cell Significance Index: 5.0500 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: 0.1434
Cell Significance Index: 6.5000 - Cell Name: epithelial cell of stomach (CL0002178)
Fold Change: 0.1413
Cell Significance Index: 16.4700 - Cell Name: direct pathway medium spiny neuron (CL4023026)
Fold Change: 0.1128
Cell Significance Index: 4.2700 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 0.1119
Cell Significance Index: 18.2000 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 0.1093
Cell Significance Index: 11.8900 - Cell Name: enteroendocrine cell of colon (CL0009042)
Fold Change: 0.1057
Cell Significance Index: 20.1200 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 0.0972
Cell Significance Index: 19.5000 - Cell Name: foveolar cell of stomach (CL0002179)
Fold Change: 0.0966
Cell Significance Index: 0.6300 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: 0.0963
Cell Significance Index: 4.2600 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 0.0932
Cell Significance Index: 33.4200 - Cell Name: Purkinje cell (CL0000121)
Fold Change: 0.0824
Cell Significance Index: 1.8100 - Cell Name: microfold cell of epithelium of small intestine (CL1000353)
Fold Change: 0.0658
Cell Significance Index: 4.5500 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 0.0626
Cell Significance Index: 12.4200 - Cell Name: enteroendocrine cell of small intestine (CL0009006)
Fold Change: 0.0528
Cell Significance Index: 1.3200 - Cell Name: fibro/adipogenic progenitor cell (CL0009099)
Fold Change: 0.0527
Cell Significance Index: 2.6600 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: 0.0443
Cell Significance Index: 6.0800 - Cell Name: skeletal muscle fiber (CL0008002)
Fold Change: 0.0424
Cell Significance Index: 1.0900 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: 0.0379
Cell Significance Index: 6.8400 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: 0.0215
Cell Significance Index: 1.6500 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: 0.0211
Cell Significance Index: 2.5900 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: 0.0211
Cell Significance Index: 0.5900 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: 0.0198
Cell Significance Index: 1.1100 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: 0.0153
Cell Significance Index: 0.9400 - Cell Name: cell in vitro (CL0001034)
Fold Change: 0.0146
Cell Significance Index: 7.9800 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: 0.0120
Cell Significance Index: 0.7400 - Cell Name: hair follicular keratinocyte (CL2000092)
Fold Change: 0.0108
Cell Significance Index: 4.7700 - Cell Name: odontoblast (CL0000060)
Fold Change: 0.0048
Cell Significance Index: 0.6200 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: 0.0033
Cell Significance Index: 0.2100 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: -0.0001
Cell Significance Index: -0.0100 - Cell Name: gut absorptive cell (CL0000677)
Fold Change: -0.0013
Cell Significance Index: -0.0800 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: -0.0015
Cell Significance Index: -0.2600 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: -0.0023
Cell Significance Index: -4.2500 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: -0.0030
Cell Significance Index: -0.0800 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0036
Cell Significance Index: -2.6800 - Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
Fold Change: -0.0042
Cell Significance Index: -3.1100 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: -0.0044
Cell Significance Index: -3.3200 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0059
Cell Significance Index: -3.3500 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: -0.0062
Cell Significance Index: -3.9500 - Cell Name: pancreatic PP cell (CL0002275)
Fold Change: -0.0073
Cell Significance Index: -4.5400 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: -0.0091
Cell Significance Index: -4.1200 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.0096
Cell Significance Index: -1.1000 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.0097
Cell Significance Index: -0.9900 - Cell Name: peg cell (CL4033014)
Fold Change: -0.0156
Cell Significance Index: -0.3600 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: -0.0161
Cell Significance Index: -0.2200 - Cell Name: keratocyte (CL0002363)
Fold Change: -0.0176
Cell Significance Index: -0.2800 - Cell Name: medial ganglionic eminence derived interneuron (CL4023063)
Fold Change: -0.0182
Cell Significance Index: -0.2600 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.0198
Cell Significance Index: -4.1800 - Cell Name: myeloid lineage restricted progenitor cell (CL0000839)
Fold Change: -0.0214
Cell Significance Index: -0.3000 - Cell Name: tonsil germinal center B cell (CL2000006)
Fold Change: -0.0228
Cell Significance Index: -2.6900 - Cell Name: lactocyte (CL0002325)
Fold Change: -0.0239
Cell Significance Index: -3.0900 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: -0.0262
Cell Significance Index: -3.8100 - Cell Name: intestinal epithelial cell (CL0002563)
Fold Change: -0.0266
Cell Significance Index: -0.2800 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: -0.0268
Cell Significance Index: -1.2600 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: -0.0290
Cell Significance Index: -1.5300 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: -0.0311
Cell Significance Index: -2.0900 - Cell Name: fibroblast of mammary gland (CL0002555)
Fold Change: -0.0401
Cell Significance Index: -1.1500 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: -0.0428
Cell Significance Index: -4.4600 - Cell Name: sebum secreting cell (CL0000317)
Fold Change: -0.0458
Cell Significance Index: -3.2400 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: -0.0463
Cell Significance Index: -3.4500 - Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
Fold Change: -0.0470
Cell Significance Index: -1.0000 - Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
Fold Change: -0.0495
Cell Significance Index: -3.9200 - Cell Name: early pro-B cell (CL0002046)
Fold Change: -0.0512
Cell Significance Index: -3.3000 - Cell Name: epithelial cell of uterus (CL0002149)
Fold Change: -0.0541
Cell Significance Index: -0.7500 - Cell Name: transit amplifying cell of colon (CL0009011)
Fold Change: -0.0564
Cell Significance Index: -1.8100 - Cell Name: basal cell of prostate epithelium (CL0002341)
Fold Change: -0.0566
Cell Significance Index: -1.5400 - Cell Name: cortical interneuron (CL0008031)
Fold Change: -0.0567
Cell Significance Index: -1.3600 - Cell Name: BEST4+ enteroycte (CL4030026)
Fold Change: -0.0577
Cell Significance Index: -0.8700 - Cell Name: erythroid progenitor cell (CL0000038)
Fold Change: -0.0642
Cell Significance Index: -0.8400 - Cell Name: cardiac endothelial cell (CL0010008)
Fold Change: -0.0661
Cell Significance Index: -0.9500 - Cell Name: neuron associated cell (CL0000095)
Fold Change: -0.0703
Cell Significance Index: -2.8800 - Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
Fold Change: -0.0740
Cell Significance Index: -1.5700 - Cell Name: mesenchymal cell (CL0008019)
Fold Change: -0.0795
Cell Significance Index: -1.3300 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: -0.0804
Cell Significance Index: -2.5600 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
Fold Change: -0.0849
Cell Significance Index: -2.7800 - Cell Name: hepatoblast (CL0005026)
Fold Change: -0.0850
Cell Significance Index: -1.4300 - Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
Fold Change: -0.0882
Cell Significance Index: -3.0700 - Cell Name: fibroblast of cardiac tissue (CL0002548)
Fold Change: -0.0898
Cell Significance Index: -1.2900 - Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
Fold Change: -0.0905
Cell Significance Index: -3.1700 - Cell Name: stratified epithelial cell (CL0000079)
Fold Change: -0.0918
Cell Significance Index: -3.3700 - Cell Name: preadipocyte (CL0002334)
Fold Change: -0.0933
Cell Significance Index: -1.8200 - Cell Name: respiratory goblet cell (CL0002370)
Fold Change: -0.0960
Cell Significance Index: -0.9900 - Cell Name: hippocampal pyramidal neuron (CL1001571)
Fold Change: -0.0960
Cell Significance Index: -2.7400 - Cell Name: sst GABAergic cortical interneuron (CL4023017)
Fold Change: -0.1017
Cell Significance Index: -2.0100 - Cell Name: connective tissue cell (CL0002320)
Fold Change: -0.1089
Cell Significance Index: -1.0500 - Cell Name: VIP GABAergic cortical interneuron (CL4023016)
Fold Change: -0.1091
Cell Significance Index: -2.1900
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 3676617402
Symbol: MSHR_HUMAN
Name: Melanocyte-stimulating hormone receptor
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 1325670
Title: The cloning of a family of genes that encode the melanocortin receptors.
PubMed ID: 1325670
PubMed ID: 8463333
Title: Molecular cloning of a novel melanocortin receptor.
PubMed ID: 8463333
PubMed ID: 1516719
Title: Molecular cloning and expression of the human melanocyte stimulating hormone receptor cDNA.
PubMed ID: 1516719
PubMed ID: 8706868
PubMed ID: 10101176
Title: High polymorphism at the human melanocortin 1 receptor locus.
PubMed ID: 10101176
PubMed ID: 11442765
Title: The Pro162 variant is a loss-of-function mutation of the human melanocortin 1 receptor gene.
PubMed ID: 11442765
PubMed ID: 11750130
Title: The human melanocortin-1 receptor locus: analysis of transcription unit, locus polymorphism and haplotype evolution.
PubMed ID: 11750130
PubMed ID: 11707265
Title: Thr40 and Met122 are new partial loss-of-function natural mutations of the human melanocortin 1 receptor.
PubMed ID: 11707265
PubMed ID: 16463023
Title: Identification of novel functional variants of the melanocortin 1 receptor gene originated from Asians.
PubMed ID: 16463023
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 12663858
Title: The melanocortin-1 receptor gene mediates female-specific mechanisms of analgesia in mice and humans.
PubMed ID: 12663858
PubMed ID: 19737927
Title: Mahogunin ring finger-1 (MGRN1) E3 ubiquitin ligase inhibits signaling from melanocortin receptor by competition with Galphas.
PubMed ID: 19737927
PubMed ID: 31097585
Title: Human nonvisual opsin 3 regulates pigmentation of epidermal melanocytes through functional interaction with melanocortin 1 receptor.
PubMed ID: 31097585
PubMed ID: 9640562
Title: Modeling of the three-dimensional structure of the human melanocortin 1 receptor, using an automated method and docking of a rigid cyclic melanocyte-stimulating hormone core peptide.
PubMed ID: 9640562
PubMed ID: 7581459
Title: Variants of the melanocyte-stimulating hormone receptor gene are associated with red hair and fair skin in humans.
PubMed ID: 7581459
DOI: 10.1038/ng1195-328
PubMed ID: 8894704
Title: The Asp84Glu variant of the melanocortin 1 receptor (MC1R) is associated with melanoma.
PubMed ID: 8894704
PubMed ID: 9302268
Title: Characterization of melanocyte stimulating hormone receptor variant alleles in twins with red hair.
PubMed ID: 9302268
PubMed ID: 8990005
Title: Identification of common polymorphisms in the coding sequence of the human MSH receptor (MC1R) with possible biological effects.
PubMed ID: 8990005
DOI: 10.1002/(sici)1098-1004(1997)9:1<30::aid-humu5>3.0.co;2-t
PubMed ID: 9571181
Title: Human pigmentation phenotype: a point mutation generates nonfunctional MSH receptor.
PubMed ID: 9571181
PubMed ID: 9665397
Title: Melanocortin 1 receptor variants in an Irish population.
PubMed ID: 9665397
PubMed ID: 10403794
Title: Loss of function mutations of the human melanocortin 1 receptor are common and are associated with red hair.
PubMed ID: 10403794
PubMed ID: 12473109
Title: Loss-of-function variants of the human melanocortin-1 receptor gene in melanoma cells define structural determinants of receptor function.
PubMed ID: 12473109
PubMed ID: 15972726
Title: Altered cell surface expression of human MC1R variant receptor alleles associated with red hair and skin cancer risk.
PubMed ID: 15972726
DOI: 10.1093/hmg/ddi219
PubMed ID: 17434924
Title: MC1R: three novel variants identified in a malignant melanoma association study in the Spanish population.
PubMed ID: 17434924
PubMed ID: 17952075
Title: Genetic determinants of hair, eye and skin pigmentation in Europeans.
PubMed ID: 17952075
DOI: 10.1038/ng.2007.13
PubMed ID: 18987736
Title: DNA sequencing of a cytogenetically normal acute myeloid leukaemia genome.
PubMed ID: 18987736
DOI: 10.1038/nature07485
PubMed ID: 19338054
Title: Identification and functional analysis of novel variants of the human melanocortin 1 receptor found in melanoma patients.
PubMed ID: 19338054
DOI: 10.1002/humu.20971
PubMed ID: 28501589
Title: Genetic modifiers of multiple sclerosis progression, severity and onset.
PubMed ID: 28501589
Sequence Information:
- Length: 317
- Mass: 34706
- Checksum: CB67405A562C29B2
- Sequence:
MAVQGSQRRL LGSLNSTPTA IPQLGLAANQ TGARCLEVSI SDGLFLSLGL VSLVENALVV ATIAKNRNLH SPMYCFICCL ALSDLLVSGS NVLETAVILL LEAGALVARA AVLQQLDNVI DVITCSSMLS SLCFLGAIAV DRYISIFYAL RYHSIVTLPR ARRAVAAIWV ASVVFSTLFI AYYDHVAVLL CLVVFFLAML VLMAVLYVHM LARACQHAQG IARLHKRQRP VHQGFGLKGA VTLTILLGIF FLCWGPFFLH LTLIVLCPEH PTCGCIFKNF NLFLALIICN AIIDPLIYAF HSQELRRTLK EVLTCSW
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.