Details for: RPS7

Gene ID: 6201

Symbol: RPS7

Ensembl ID: ENSG00000171863

Description: ribosomal protein S7

Associated with

Cells (max top 100)

(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)

  • Cell Name: embryonic stem cell (CL0002322)
    Fold Change: 702.0553
    Cell Significance Index: -289.2100
  • Cell Name: smooth muscle fiber of ileum (CL1000278)
    Fold Change: 585.3775
    Cell Significance Index: -276.3700
  • Cell Name: peripheral blood mononuclear cell (CL2000001)
    Fold Change: 558.3121
    Cell Significance Index: -287.1900
  • Cell Name: ileal goblet cell (CL1000326)
    Fold Change: 413.4141
    Cell Significance Index: -277.4100
  • Cell Name: CD8-alpha-beta-positive, alpha-beta intraepithelial T cell (CL0000796)
    Fold Change: 35.7428
    Cell Significance Index: -95.7500
  • Cell Name: pro-T cell (CL0000827)
    Fold Change: 17.8725
    Cell Significance Index: 456.5900
  • Cell Name: theca cell (CL0000503)
    Fold Change: 16.1208
    Cell Significance Index: 94.7100
  • Cell Name: abnormal cell (CL0001061)
    Fold Change: 15.4331
    Cell Significance Index: 1576.4900
  • Cell Name: neutrophil progenitor cell (CL0000834)
    Fold Change: 15.2669
    Cell Significance Index: 408.3800
  • Cell Name: interstitial cell of ovary (CL0002094)
    Fold Change: 13.9337
    Cell Significance Index: 178.4500
  • Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
    Fold Change: 12.6013
    Cell Significance Index: 592.2500
  • Cell Name: granulosa cell (CL0000501)
    Fold Change: 11.6243
    Cell Significance Index: 305.6600
  • Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
    Fold Change: 10.7029
    Cell Significance Index: 371.9200
  • Cell Name: fibroblast of dermis (CL0002551)
    Fold Change: 9.7518
    Cell Significance Index: 204.1200
  • Cell Name: fibroblast of mammary gland (CL0002555)
    Fold Change: 9.6254
    Cell Significance Index: 275.9200
  • Cell Name: lactocyte (CL0002325)
    Fold Change: 9.2077
    Cell Significance Index: 1189.5700
  • Cell Name: stromal cell of ovary (CL0002132)
    Fold Change: 9.2073
    Cell Significance Index: 1264.4200
  • Cell Name: sebum secreting cell (CL0000317)
    Fold Change: 8.8803
    Cell Significance Index: 628.0500
  • Cell Name: vascular lymphangioblast (CL0005022)
    Fold Change: 8.7820
    Cell Significance Index: 155.1900
  • Cell Name: endothelial cell of venule (CL1000414)
    Fold Change: 8.7637
    Cell Significance Index: 99.5600
  • Cell Name: skeletal muscle myoblast (CL0000515)
    Fold Change: 8.4249
    Cell Significance Index: 91.5900
  • Cell Name: tonsil germinal center B cell (CL2000006)
    Fold Change: 8.3691
    Cell Significance Index: 986.9700
  • Cell Name: basal cell of urothelium (CL1000486)
    Fold Change: 7.9271
    Cell Significance Index: 974.7100
  • Cell Name: hair follicular keratinocyte (CL2000092)
    Fold Change: 7.8789
    Cell Significance Index: 3483.4600
  • Cell Name: cell in vitro (CL0001034)
    Fold Change: 7.7920
    Cell Significance Index: 4255.4100
  • Cell Name: intermediate cell of urothelium (CL4030055)
    Fold Change: 7.7073
    Cell Significance Index: 1389.3900
  • Cell Name: peg cell (CL4033014)
    Fold Change: 7.3646
    Cell Significance Index: 170.1500
  • Cell Name: early pro-B cell (CL0002046)
    Fold Change: 7.0260
    Cell Significance Index: 453.2900
  • Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
    Fold Change: 6.9629
    Cell Significance Index: 518.9400
  • Cell Name: CD14-positive, CD16-negative classical monocyte (CL0002057)
    Fold Change: 6.1074
    Cell Significance Index: 112.8800
  • Cell Name: CD4-positive, alpha-beta memory T cell, CD45RO-positive (CL0001204)
    Fold Change: 6.0753
    Cell Significance Index: 178.4300
  • Cell Name: basal cell of prostate epithelium (CL0002341)
    Fold Change: 5.8819
    Cell Significance Index: 160.1000
  • Cell Name: odontoblast (CL0000060)
    Fold Change: 5.0486
    Cell Significance Index: 647.2000
  • Cell Name: acinar cell of salivary gland (CL0002623)
    Fold Change: 4.4629
    Cell Significance Index: 208.0800
  • Cell Name: pancreatic acinar cell (CL0002064)
    Fold Change: 4.0954
    Cell Significance Index: 699.3200
  • Cell Name: luminal hormone-sensing cell of mammary gland (CL4033058)
    Fold Change: 3.9875
    Cell Significance Index: 24.5400
  • Cell Name: glycinergic neuron (CL1001509)
    Fold Change: 3.6841
    Cell Significance Index: 193.4300
  • Cell Name: neoplastic cell (CL0001063)
    Fold Change: 3.2430
    Cell Significance Index: 643.5800
  • Cell Name: placental villous trophoblast (CL2000060)
    Fold Change: 2.4366
    Cell Significance Index: 65.0600
  • Cell Name: umbrella cell of urothelium (CL4030056)
    Fold Change: 2.3228
    Cell Significance Index: 21.3900
  • Cell Name: kidney cell (CL1000497)
    Fold Change: 2.2269
    Cell Significance Index: 17.7800
  • Cell Name: pulmonary alveolar epithelial cell (CL0000322)
    Fold Change: 2.2027
    Cell Significance Index: 1667.2500
  • Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
    Fold Change: 1.0849
    Cell Significance Index: 795.4500
  • Cell Name: tuft cell of colon (CL0009041)
    Fold Change: 0.8812
    Cell Significance Index: 795.6600
  • Cell Name: enteroendocrine cell of colon (CL0009042)
    Fold Change: 0.7510
    Cell Significance Index: 142.9200
  • Cell Name: bladder urothelial cell (CL1001428)
    Fold Change: 0.5236
    Cell Significance Index: 27.2000
  • Cell Name: oral mucosa squamous cell (CL1001576)
    Fold Change: 0.4259
    Cell Significance Index: 3.6600
  • Cell Name: enterocyte of epithelium of large intestine (CL0002071)
    Fold Change: 0.2906
    Cell Significance Index: 13.1700
  • Cell Name: colon goblet cell (CL0009039)
    Fold Change: 0.1930
    Cell Significance Index: 19.0900
  • Cell Name: dopaminergic neuron (CL0000700)
    Fold Change: 0.0960
    Cell Significance Index: 27.6200
  • Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
    Fold Change: 0.0790
    Cell Significance Index: 6.2600
  • Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
    Fold Change: 0.0410
    Cell Significance Index: 8.2300
  • Cell Name: epithelial cell of small intestine (CL0002254)
    Fold Change: 0.0105
    Cell Significance Index: 1.7000
  • Cell Name: pigmented epithelial cell (CL0000529)
    Fold Change: -0.0792
    Cell Significance Index: -149.1200
  • Cell Name: pancreatic A cell (CL0000171)
    Fold Change: -0.1053
    Cell Significance Index: -77.9900
  • Cell Name: anterior lens cell (CL0002223)
    Fold Change: -0.1290
    Cell Significance Index: -237.9800
  • Cell Name: pancreatic PP cell (CL0002275)
    Fold Change: -0.1588
    Cell Significance Index: -99.1900
  • Cell Name: lens epithelial cell (CL0002224)
    Fold Change: -0.1658
    Cell Significance Index: -255.1700
  • Cell Name: type B pancreatic cell (CL0000169)
    Fold Change: -0.2295
    Cell Significance Index: -129.4200
  • Cell Name: secondary lens fiber (CL0002225)
    Fold Change: -0.2302
    Cell Significance Index: -312.9700
  • Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
    Fold Change: -0.2975
    Cell Significance Index: -106.7200
  • Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
    Fold Change: -0.3405
    Cell Significance Index: -216.2700
  • Cell Name: ciliary muscle cell (CL1000443)
    Fold Change: -0.5324
    Cell Significance Index: -241.6300
  • Cell Name: pancreatic D cell (CL0000173)
    Fold Change: -0.5582
    Cell Significance Index: -117.5700
  • Cell Name: eye photoreceptor cell (CL0000287)
    Fold Change: -0.9190
    Cell Significance Index: -57.9200
  • Cell Name: pancreatic ductal cell (CL0002079)
    Fold Change: -1.1041
    Cell Significance Index: -126.4900
  • Cell Name: pancreatic endocrine cell (CL0008024)
    Fold Change: -1.1074
    Cell Significance Index: -126.4100
  • Cell Name: forebrain neuroblast (CL1000042)
    Fold Change: -1.3641
    Cell Significance Index: -83.8400
  • Cell Name: endothelial cell of placenta (CL0009092)
    Fold Change: -1.4201
    Cell Significance Index: -8.5800
  • Cell Name: retinal progenitor cell (CL0002672)
    Fold Change: -1.4388
    Cell Significance Index: -80.7400
  • Cell Name: mesenchymal cell (CL0008019)
    Fold Change: -1.5093
    Cell Significance Index: -25.2600
  • Cell Name: pigmented ciliary epithelial cell (CL0002303)
    Fold Change: -1.7262
    Cell Significance Index: -250.9300
  • Cell Name: CD4-positive, alpha-beta thymocyte (CL0000810)
    Fold Change: -1.8180
    Cell Significance Index: -31.3400
  • Cell Name: hepatic pit cell (CL2000054)
    Fold Change: -2.0027
    Cell Significance Index: -5.3600
  • Cell Name: gut absorptive cell (CL0000677)
    Fold Change: -2.6198
    Cell Significance Index: -157.2800
  • Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
    Fold Change: -2.6234
    Cell Significance Index: -273.1600
  • Cell Name: transit amplifying cell of colon (CL0009011)
    Fold Change: -3.0190
    Cell Significance Index: -96.7000
  • Cell Name: cardiac muscle myoblast (CL0000513)
    Fold Change: -3.3584
    Cell Significance Index: -257.7200
  • Cell Name: perivascular cell (CL4033054)
    Fold Change: -3.6017
    Cell Significance Index: -16.6300
  • Cell Name: hippocampal granule cell (CL0001033)
    Fold Change: -3.8355
    Cell Significance Index: -257.9000
  • Cell Name: conjunctival epithelial cell (CL1000432)
    Fold Change: -3.9674
    Cell Significance Index: -54.1300
  • Cell Name: retinal rod cell (CL0000604)
    Fold Change: -4.1357
    Cell Significance Index: -49.3000
  • Cell Name: intestinal tuft cell (CL0019032)
    Fold Change: -4.3329
    Cell Significance Index: -265.6500
  • Cell Name: seromucus secreting cell (CL0000159)
    Fold Change: -4.3830
    Cell Significance Index: -91.4100
  • Cell Name: paneth cell of colon (CL0009009)
    Fold Change: -4.6710
    Cell Significance Index: -69.9900
  • Cell Name: small intestine goblet cell (CL1000495)
    Fold Change: -4.9695
    Cell Significance Index: -174.6200
  • Cell Name: cerebellar granule cell (CL0001031)
    Fold Change: -5.0113
    Cell Significance Index: -85.8800
  • Cell Name: paneth cell of epithelium of small intestine (CL1000343)
    Fold Change: -5.4706
    Cell Significance Index: -118.5200
  • Cell Name: kidney epithelial cell (CL0002518)
    Fold Change: -5.5121
    Cell Significance Index: -162.3600
  • Cell Name: mature alpha-beta T cell (CL0000791)
    Fold Change: -5.6668
    Cell Significance Index: -30.9000
  • Cell Name: microcirculation associated smooth muscle cell (CL0008035)
    Fold Change: -6.1216
    Cell Significance Index: -51.4200
  • Cell Name: indirect pathway medium spiny neuron (CL4023029)
    Fold Change: -6.3600
    Cell Significance Index: -281.3200
  • Cell Name: stratified epithelial cell (CL0000079)
    Fold Change: -6.6534
    Cell Significance Index: -244.2400
  • Cell Name: extravillous trophoblast (CL0008036)
    Fold Change: -6.8014
    Cell Significance Index: -42.2600
  • Cell Name: cone retinal bipolar cell (CL0000752)
    Fold Change: -7.1433
    Cell Significance Index: -55.0600
  • Cell Name: luminal epithelial cell of mammary gland (CL0002326)
    Fold Change: -7.1886
    Cell Significance Index: -92.5800
  • Cell Name: skeletal muscle fiber (CL0008002)
    Fold Change: -7.3107
    Cell Significance Index: -187.9200
  • Cell Name: direct pathway medium spiny neuron (CL4023026)
    Fold Change: -7.5910
    Cell Significance Index: -287.4500
  • Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
    Fold Change: -7.6860
    Cell Significance Index: -269.2600
  • Cell Name: L6b glutamatergic cortical neuron (CL4023038)
    Fold Change: -7.6915
    Cell Significance Index: -251.8200

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Other Information

**Key Characteristics** RPS7 is a highly conserved protein, with significant sequence homology across species. It is a small, acidic protein (approximately 115 amino acids) that is localized to the cytosol and cytosolic ribosomes. RPS7 is a key component of the 40S small subunit, interacting with eIF2, eIF4E, and eIF3 to facilitate the binding of mRNA to the ribosome. This protein is also involved in the regulation of gene expression, with studies suggesting its involvement in the positive regulation of gene expression and the negative regulation of ubiquitin-dependent protein catabolic process. **Pathways and Functions** RPS7 is involved in various cellular pathways, including: 1. **Translation initiation**: RPS7 plays a critical role in the initiation of translation, binding to mRNA and facilitating the recruitment of the 43S complex. 2. **Stress response**: RPS7 is involved in the cellular response to stress, including starvation and viral infections. 3. **Viral infection**: RPS7 has been implicated in the modulation of host translation machinery by SARS-CoV-1 and SARS-CoV-2. 4. **Gene expression**: RPS7 is involved in the positive regulation of gene expression and the negative regulation of ubiquitin-dependent protein catabolic process. 5. **Ribosome biogenesis**: RPS7 is involved in the biogenesis of the 40S small subunit and the small-subunit processome. **Clinical Significance** Dysregulation of RPS7 has been implicated in various diseases, including: 1. **Cancer**: RPS7 has been found to be overexpressed in certain types of cancer, including breast and lung cancer. 2. **Infectious diseases**: RPS7 has been implicated in the modulation of host translation machinery by SARS-CoV-1 and SARS-CoV-2. 3. **Neurological disorders**: RPS7 has been found to be involved in the pathogenesis of certain neurological disorders, including Alzheimer's disease and Parkinson's disease. 4. **Metabolic disorders**: RPS7 has been implicated in the regulation of gene expression in metabolic disorders, including diabetes and obesity. In conclusion, RPS7 is a crucial component of the eukaryotic ribosome, playing a pivotal role in the initiation of translation and the regulation of gene expression. Its dysregulation has been implicated in various diseases, highlighting the importance of this protein in maintaining cellular homeostasis. Further research is needed to fully elucidate the functions of RPS7 and its role in disease.

Genular Protein ID: 3556201778

Symbol: RS7_HUMAN

Name: 40S ribosomal protein S7

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 8522193

Title: The human ribosomal protein S7-encoding gene: isolation, structure and localization in 2p25.

PubMed ID: 8522193

DOI: 10.1016/0378-1119(95)00405-u

PubMed ID: 14702039

Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.

PubMed ID: 14702039

DOI: 10.1038/ng1285

PubMed ID: 15815621

Title: Generation and annotation of the DNA sequences of human chromosomes 2 and 4.

PubMed ID: 15815621

DOI: 10.1038/nature03466

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 8706699

Title: Characterization of the human small-ribosomal-subunit proteins by N-terminal and internal sequencing, and mass spectrometry.

PubMed ID: 8706699

DOI: 10.1111/j.1432-1033.1996.0144u.x

PubMed ID: 9687515

Title: Importin beta, transportin, RanBP5 and RanBP7 mediate nuclear import of ribosomal proteins in mammalian cells.

PubMed ID: 9687515

DOI: 10.1093/emboj/17.15.4491

PubMed ID: 11823430

Title: Importins fulfill a dual function as nuclear import receptors and cytoplasmic chaperones for exposed basic domains.

PubMed ID: 11823430

DOI: 10.1093/emboj/21.3.377

PubMed ID: 14654843

Title: Proteomic characterization of the human centrosome by protein correlation profiling.

PubMed ID: 14654843

DOI: 10.1038/nature02166

PubMed ID: 19061985

Title: Ribosomal protein L5 and L11 mutations are associated with cleft palate and abnormal thumbs in Diamond-Blackfan anemia patients.

PubMed ID: 19061985

DOI: 10.1016/j.ajhg.2008.11.004

PubMed ID: 18669648

Title: A quantitative atlas of mitotic phosphorylation.

PubMed ID: 18669648

DOI: 10.1073/pnas.0805139105

PubMed ID: 19690332

Title: Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions.

PubMed ID: 19690332

DOI: 10.1126/scisignal.2000007

PubMed ID: 19608861

Title: Lysine acetylation targets protein complexes and co-regulates major cellular functions.

PubMed ID: 19608861

DOI: 10.1126/science.1175371

PubMed ID: 20873783

Title: Characterization of hNek6 interactome reveals an important role for its short N-terminal domain and colocalization with proteins at the centrosome.

PubMed ID: 20873783

DOI: 10.1021/pr100562w

PubMed ID: 20068231

Title: Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.

PubMed ID: 20068231

DOI: 10.1126/scisignal.2000475

PubMed ID: 21269460

Title: Initial characterization of the human central proteome.

PubMed ID: 21269460

DOI: 10.1186/1752-0509-5-17

PubMed ID: 21406692

Title: System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation.

PubMed ID: 21406692

DOI: 10.1126/scisignal.2001570

PubMed ID: 24524803

Title: A new system for naming ribosomal proteins.

PubMed ID: 24524803

DOI: 10.1016/j.sbi.2014.01.002

PubMed ID: 24275569

Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.

PubMed ID: 24275569

DOI: 10.1016/j.jprot.2013.11.014

PubMed ID: 25944712

Title: N-terminome analysis of the human mitochondrial proteome.

PubMed ID: 25944712

DOI: 10.1002/pmic.201400617

PubMed ID: 28112733

Title: Site-specific mapping of the human SUMO proteome reveals co-modification with phosphorylation.

PubMed ID: 28112733

DOI: 10.1038/nsmb.3366

PubMed ID: 23636399

Title: Structures of the human and Drosophila 80S ribosome.

PubMed ID: 23636399

DOI: 10.1038/nature12104

PubMed ID: 28483520

Title: PPPDE1 is a novel deubiquitinase belonging to a cysteine isopeptidase family.

PubMed ID: 28483520

DOI: 10.1016/j.bbrc.2017.04.161

PubMed ID: 34516797

Title: Nucleolar maturation of the human small subunit processome.

PubMed ID: 34516797

DOI: 10.1126/science.abj5338

Sequence Information:

  • Length: 194
  • Mass: 22127
  • Checksum: E21089929CC061E9
  • Sequence:
  • MFSSSAKIVK PNGEKPDEFE SGISQALLEL EMNSDLKAQL RELNITAAKE IEVGGGRKAI 
    IIFVPVPQLK SFQKIQVRLV RELEKKFSGK HVVFIAQRRI LPKPTRKSRT KNKQKRPRSR 
    TLTAVHDAIL EDLVFPSEIV GKRIRVKLDG SRLIKVHLDK AQQNNVEHKV ETFSGVYKKL 
    TGKDVNFEFP EFQL

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.