Details for: SNX2
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: polychromatophilic erythroblast (CL0000550)
Fold Change: 336.2366
Cell Significance Index: -52.3000 - Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
Fold Change: 192.2778
Cell Significance Index: -48.7700 - Cell Name: embryonic stem cell (CL0002322)
Fold Change: 146.5963
Cell Significance Index: -60.3900 - Cell Name: mucosal type mast cell (CL0000485)
Fold Change: 132.7361
Cell Significance Index: -53.9300 - Cell Name: smooth muscle fiber of ileum (CL1000278)
Fold Change: 131.0676
Cell Significance Index: -61.8800 - Cell Name: peripheral blood mononuclear cell (CL2000001)
Fold Change: 114.9722
Cell Significance Index: -59.1400 - Cell Name: ileal goblet cell (CL1000326)
Fold Change: 92.5007
Cell Significance Index: -62.0700 - Cell Name: ciliated cell of the bronchus (CL0002332)
Fold Change: 57.0494
Cell Significance Index: -54.4700 - Cell Name: orthochromatic erythroblast (CL0000552)
Fold Change: 46.2060
Cell Significance Index: -56.9700 - Cell Name: CD8-alpha-beta-positive, alpha-beta intraepithelial T cell (CL0000796)
Fold Change: 19.2806
Cell Significance Index: -51.6500 - Cell Name: stromal cell of bone marrow (CL0010001)
Fold Change: 15.1139
Cell Significance Index: -59.6400 - Cell Name: CD8-positive, alpha-beta regulatory T cell (CL0000795)
Fold Change: 13.5864
Cell Significance Index: -41.7300 - Cell Name: epidermal Langerhans cell (CL0002457)
Fold Change: 11.7930
Cell Significance Index: -25.8100 - Cell Name: epithelial cell of stomach (CL0002178)
Fold Change: 4.6819
Cell Significance Index: 545.6200 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: 3.3549
Cell Significance Index: 89.5800 - Cell Name: early pro-B cell (CL0002046)
Fold Change: 2.5671
Cell Significance Index: 165.6200 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 2.2277
Cell Significance Index: 2011.4400 - Cell Name: gut absorptive cell (CL0000677)
Fold Change: 1.7338
Cell Significance Index: 104.0900 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 1.4087
Cell Significance Index: 282.5800 - Cell Name: cell in vitro (CL0001034)
Fold Change: 1.1164
Cell Significance Index: 609.7200 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: 1.1119
Cell Significance Index: 136.7200 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: 1.0862
Cell Significance Index: 195.8100 - Cell Name: tonsil germinal center B cell (CL2000006)
Fold Change: 1.0654
Cell Significance Index: 125.6400 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 0.9790
Cell Significance Index: 194.2900 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: 0.8580
Cell Significance Index: 117.8300 - Cell Name: CD14-positive, CD16-negative classical monocyte (CL0002057)
Fold Change: 0.8527
Cell Significance Index: 15.7600 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 0.7854
Cell Significance Index: 281.7100 - Cell Name: odontoblast (CL0000060)
Fold Change: 0.7850
Cell Significance Index: 100.6300 - Cell Name: fibroblast of dermis (CL0002551)
Fold Change: 0.7166
Cell Significance Index: 15.0000 - Cell Name: neutrophil progenitor cell (CL0000834)
Fold Change: 0.6617
Cell Significance Index: 17.7000 - Cell Name: hair follicular keratinocyte (CL2000092)
Fold Change: 0.5677
Cell Significance Index: 250.9900 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: 0.3695
Cell Significance Index: 22.7100 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: 0.3563
Cell Significance Index: 18.5100 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: 0.3314
Cell Significance Index: 15.4500 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: 0.3209
Cell Significance Index: 18.0100 - Cell Name: GABAergic interneuron (CL0011005)
Fold Change: 0.3102
Cell Significance Index: 214.5800 - Cell Name: microfold cell of epithelium of small intestine (CL1000353)
Fold Change: 0.3092
Cell Significance Index: 21.3800 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: 0.2867
Cell Significance Index: 15.0600 - Cell Name: sebum secreting cell (CL0000317)
Fold Change: 0.2190
Cell Significance Index: 15.4900 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: 0.1547
Cell Significance Index: 7.2700 - Cell Name: enteroendocrine cell of colon (CL0009042)
Fold Change: 0.1543
Cell Significance Index: 29.3600 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: 0.1368
Cell Significance Index: 10.5000 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: 0.1282
Cell Significance Index: 21.8900 - Cell Name: lung endothelial cell (CL1001567)
Fold Change: 0.0987
Cell Significance Index: 5.1400 - Cell Name: colon goblet cell (CL0009039)
Fold Change: 0.0873
Cell Significance Index: 8.6400 - Cell Name: umbrella cell of urothelium (CL4030056)
Fold Change: 0.0852
Cell Significance Index: 0.7800 - Cell Name: lactocyte (CL0002325)
Fold Change: 0.0682
Cell Significance Index: 8.8200 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: 0.0669
Cell Significance Index: 125.8900 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: 0.0404
Cell Significance Index: 25.6700 - Cell Name: peg cell (CL4033014)
Fold Change: 0.0390
Cell Significance Index: 0.9000 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: 0.0182
Cell Significance Index: 8.2600 - Cell Name: anterior lens cell (CL0002223)
Fold Change: 0.0073
Cell Significance Index: 13.4600 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: 0.0062
Cell Significance Index: 9.5500 - Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
Fold Change: 0.0008
Cell Significance Index: 0.6100 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: -0.0006
Cell Significance Index: -0.0200 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: -0.0045
Cell Significance Index: -6.1300 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0129
Cell Significance Index: -9.5400 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.0318
Cell Significance Index: -3.2500 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: -0.0343
Cell Significance Index: -26.0000 - Cell Name: cerebellar granule cell (CL0001031)
Fold Change: -0.0534
Cell Significance Index: -0.9200 - Cell Name: pancreatic PP cell (CL0002275)
Fold Change: -0.0596
Cell Significance Index: -37.1900 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: -0.0769
Cell Significance Index: -5.1700 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0783
Cell Significance Index: -44.1300 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: -0.0944
Cell Significance Index: -5.9500 - Cell Name: granulosa cell (CL0000501)
Fold Change: -0.1114
Cell Significance Index: -2.9300 - Cell Name: mesenchymal cell (CL0008019)
Fold Change: -0.1165
Cell Significance Index: -1.9500 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: -0.1496
Cell Significance Index: -11.1500 - Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
Fold Change: -0.1545
Cell Significance Index: -5.3700 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.1607
Cell Significance Index: -33.8500 - Cell Name: preadipocyte (CL0002334)
Fold Change: -0.1755
Cell Significance Index: -3.4300 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.1822
Cell Significance Index: -52.4400 - Cell Name: extravillous trophoblast (CL0008036)
Fold Change: -0.2060
Cell Significance Index: -1.2800 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: -0.2108
Cell Significance Index: -30.6400 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: -0.2546
Cell Significance Index: -7.1200 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: -0.2908
Cell Significance Index: -13.1800 - Cell Name: transit amplifying cell of colon (CL0009011)
Fold Change: -0.3138
Cell Significance Index: -10.0500 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.3175
Cell Significance Index: -36.3700 - Cell Name: pancreatic endocrine cell (CL0008024)
Fold Change: -0.3410
Cell Significance Index: -38.9200 - Cell Name: GABAergic amacrine cell (CL4030027)
Fold Change: -0.3495
Cell Significance Index: -4.3400 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: -0.3592
Cell Significance Index: -15.8900 - Cell Name: direct pathway medium spiny neuron (CL4023026)
Fold Change: -0.4120
Cell Significance Index: -15.6000 - Cell Name: kidney cell (CL1000497)
Fold Change: -0.4158
Cell Significance Index: -3.3200 - Cell Name: retinal rod cell (CL0000604)
Fold Change: -0.4471
Cell Significance Index: -5.3300 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: -0.4829
Cell Significance Index: -50.2800 - Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
Fold Change: -0.5158
Cell Significance Index: -40.8500 - Cell Name: basal cell of prostate epithelium (CL0002341)
Fold Change: -0.5342
Cell Significance Index: -14.5400 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: -0.6310
Cell Significance Index: -18.1800 - Cell Name: CD4-positive, alpha-beta memory T cell, CD45RO-positive (CL0001204)
Fold Change: -0.6388
Cell Significance Index: -18.7600 - Cell Name: cortical interneuron (CL0008031)
Fold Change: -0.7403
Cell Significance Index: -17.7600 - Cell Name: skeletal muscle fiber (CL0008002)
Fold Change: -0.7469
Cell Significance Index: -19.2000 - Cell Name: fibroblast of mammary gland (CL0002555)
Fold Change: -0.7877
Cell Significance Index: -22.5800 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: -0.8180
Cell Significance Index: -11.1600 - Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
Fold Change: -0.8259
Cell Significance Index: -17.5900 - Cell Name: pro-T cell (CL0000827)
Fold Change: -0.8635
Cell Significance Index: -22.0600 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: -0.8640
Cell Significance Index: -52.9700 - Cell Name: kidney epithelial cell (CL0002518)
Fold Change: -0.8702
Cell Significance Index: -25.6300 - Cell Name: hippocampal pyramidal neuron (CL1001571)
Fold Change: -1.0448
Cell Significance Index: -29.8200 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: -1.0556
Cell Significance Index: -28.2900 - Cell Name: skeletal muscle myoblast (CL0000515)
Fold Change: -1.0873
Cell Significance Index: -11.8200 - Cell Name: enteroendocrine cell of small intestine (CL0009006)
Fold Change: -1.1409
Cell Significance Index: -28.5200
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 3246891404
Symbol: SNX2_HUMAN
Name: Sorting nexin-2
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 9819414
Title: Identification of a family of sorting nexin molecules and characterization of their association with receptors.
PubMed ID: 9819414
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 15372022
Title: The DNA sequence and comparative analysis of human chromosome 5.
PubMed ID: 15372022
DOI: 10.1038/nature02919
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 11102511
Title: Human orthologs of yeast vacuolar protein sorting proteins Vps26, 29, and 35: assembly into multimeric complexes.
PubMed ID: 11102511
PubMed ID: 11438682
Title: The human formin-binding protein 17 (FBP17) interacts with sorting nexin, SNX2, and is an MLL-fusion partner in acute myelogeneous leukemia.
PubMed ID: 11438682
PubMed ID: 14596906
Title: The formin-binding protein 17, FBP17, binds via a TNKS binding motif to tankyrase, a protein involved in telomere maintenance.
PubMed ID: 14596906
PubMed ID: 16179610
Title: Sorting nexin-2 is associated with tubular elements of the early endosome, but is not essential for retromer-mediated endosome-to-TGN transport.
PubMed ID: 16179610
DOI: 10.1242/jcs.02568
PubMed ID: 16964243
Title: A probability-based approach for high-throughput protein phosphorylation analysis and site localization.
PubMed ID: 16964243
DOI: 10.1038/nbt1240
PubMed ID: 17101778
Title: Interchangeable but essential functions of SNX1 and SNX2 in the association of retromer with endosomes and the trafficking of mannose 6-phosphate receptors.
PubMed ID: 17101778
DOI: 10.1128/mcb.00156-06
PubMed ID: 18669648
Title: A quantitative atlas of mitotic phosphorylation.
PubMed ID: 18669648
PubMed ID: 18088323
Title: SNX1 defines an early endosomal recycling exit for sortilin and mannose 6-phosphate receptors.
PubMed ID: 18088323
PubMed ID: 19935774
Title: The retromer component SNX6 interacts with dynactin p150(Glued) and mediates endosome-to-TGN transport.
PubMed ID: 19935774
DOI: 10.1038/cr.2009.130
PubMed ID: 19619496
Title: The retromer coat complex coordinates endosomal sorting and dynein-mediated transport, with carrier recognition by the trans-Golgi network.
PubMed ID: 19619496
PubMed ID: 19816406
Title: Amphipathic motifs in BAR domains are essential for membrane curvature sensing.
PubMed ID: 19816406
PubMed ID: 19690332
Title: Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions.
PubMed ID: 19690332
PubMed ID: 19608861
Title: Lysine acetylation targets protein complexes and co-regulates major cellular functions.
PubMed ID: 19608861
PubMed ID: 20138391
Title: Identification of different itineraries and retromer components for endosome-to-Golgi transport of TGN38 and Shiga toxin.
PubMed ID: 20138391
PubMed ID: 20068231
Title: Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.
PubMed ID: 20068231
PubMed ID: 20604901
Title: A novel, retromer-independent role for sorting nexins 1 and 2 in RhoG-dependent membrane remodeling.
PubMed ID: 20604901
PubMed ID: 21269460
Title: Initial characterization of the human central proteome.
PubMed ID: 21269460
PubMed ID: 21406692
Title: System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation.
PubMed ID: 21406692
PubMed ID: 23085988
Title: Molecular basis for SNX-BAR-mediated assembly of distinct endosomal sorting tubules.
PubMed ID: 23085988
PubMed ID: 23186163
Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.
PubMed ID: 23186163
DOI: 10.1021/pr300630k
PubMed ID: 24275569
Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.
PubMed ID: 24275569
PubMed ID: 25944712
Title: N-terminome analysis of the human mitochondrial proteome.
PubMed ID: 25944712
Sequence Information:
- Length: 519
- Mass: 58471
- Checksum: 7DC07DFA523312B5
- Sequence:
MAAEREPPPL GDGKPTDFED LEDGEDLFTS TVSTLESSPS SPEPASLPAE DISANSNGPK PTEVVLDDDR EDLFAEATEE VSLDSPEREP ILSSEPSPAV TPVTPTTLIA PRIESKSMSA PVIFDRSREE IEEEANGDIF DIEIGVSDPE KVGDGMNAYM AYRVTTKTSL SMFSKSEFSV KRRFSDFLGL HSKLASKYLH VGYIVPPAPE KSIVGMTKVK VGKEDSSSTE FVEKRRAALE RYLQRTVKHP TLLQDPDLRQ FLESSELPRA VNTQALSGAG ILRMVNKAAD AVNKMTIKMN ESDAWFEEKQ QQFENLDQQL RKLHVSVEAL VCHRKELSAN TAAFAKSAAM LGNSEDHTAL SRALSQLAEV EEKIDQLHQE QAFADFYMFS ELLSDYIRLI AAVKGVFDHR MKCWQKWEDA QITLLKKREA EAKMMVANKP DKIQQAKNEI REWEAKVQQG ERDFEQISKT IRKEVGRFEK ERVKDFKTVI IKYLESLVQT QQQLIKYWEA FLPEAKAIA
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.