Details for: SUPT4H1
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: polychromatophilic erythroblast (CL0000550)
Fold Change: 152.0458
Cell Significance Index: -23.6500 - Cell Name: embryonic stem cell (CL0002322)
Fold Change: 97.9251
Cell Significance Index: -40.3400 - Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
Fold Change: 85.5532
Cell Significance Index: -21.7000 - Cell Name: smooth muscle fiber of ileum (CL1000278)
Fold Change: 83.8341
Cell Significance Index: -39.5800 - Cell Name: peripheral blood mononuclear cell (CL2000001)
Fold Change: 78.3654
Cell Significance Index: -40.3100 - Cell Name: ileal goblet cell (CL1000326)
Fold Change: 58.8654
Cell Significance Index: -39.5000 - Cell Name: orthochromatic erythroblast (CL0000552)
Fold Change: 27.1056
Cell Significance Index: -33.4200 - Cell Name: CD8-positive, alpha-beta regulatory T cell (CL0000795)
Fold Change: 11.2390
Cell Significance Index: -34.5200 - Cell Name: stromal cell of bone marrow (CL0010001)
Fold Change: 9.9872
Cell Significance Index: -39.4100 - Cell Name: CD8-alpha-beta-positive, alpha-beta intraepithelial T cell (CL0000796)
Fold Change: 8.8097
Cell Significance Index: -23.6000 - Cell Name: kidney cell (CL1000497)
Fold Change: 4.1807
Cell Significance Index: 33.3800 - Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
Fold Change: 4.0686
Cell Significance Index: 86.6500 - Cell Name: microfold cell of epithelium of small intestine (CL1000353)
Fold Change: 4.0003
Cell Significance Index: 276.6400 - Cell Name: epithelial cell of stomach (CL0002178)
Fold Change: 3.3287
Cell Significance Index: 387.9200 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 2.8173
Cell Significance Index: 458.2100 - Cell Name: CD14-positive, CD16-negative classical monocyte (CL0002057)
Fold Change: 2.7788
Cell Significance Index: 51.3600 - Cell Name: granulosa cell (CL0000501)
Fold Change: 2.4434
Cell Significance Index: 64.2500 - Cell Name: gut absorptive cell (CL0000677)
Fold Change: 2.2029
Cell Significance Index: 132.2500 - Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
Fold Change: 2.0590
Cell Significance Index: 71.5500 - Cell Name: early pro-B cell (CL0002046)
Fold Change: 2.0581
Cell Significance Index: 132.7800 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 2.0158
Cell Significance Index: 219.2600 - Cell Name: interstitial cell of ovary (CL0002094)
Fold Change: 1.8018
Cell Significance Index: 23.0800 - Cell Name: CD4-positive, alpha-beta memory T cell, CD45RO-positive (CL0001204)
Fold Change: 1.6912
Cell Significance Index: 49.6700 - Cell Name: tonsil germinal center B cell (CL2000006)
Fold Change: 1.5489
Cell Significance Index: 182.6600 - Cell Name: fibroblast of dermis (CL0002551)
Fold Change: 1.4636
Cell Significance Index: 30.6400 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: 1.4212
Cell Significance Index: 195.1700 - Cell Name: skeletal muscle myoblast (CL0000515)
Fold Change: 1.3016
Cell Significance Index: 14.1500 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: 1.0794
Cell Significance Index: 50.7300 - Cell Name: cell in vitro (CL0001034)
Fold Change: 0.9726
Cell Significance Index: 531.1600 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: 0.9658
Cell Significance Index: 71.9800 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: 0.9513
Cell Significance Index: 116.9700 - Cell Name: endothelial cell of venule (CL1000414)
Fold Change: 0.8943
Cell Significance Index: 10.1600 - Cell Name: odontoblast (CL0000060)
Fold Change: 0.8929
Cell Significance Index: 114.4700 - Cell Name: hair follicular keratinocyte (CL2000092)
Fold Change: 0.8528
Cell Significance Index: 377.0400 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: 0.8468
Cell Significance Index: 152.6500 - Cell Name: lactocyte (CL0002325)
Fold Change: 0.8000
Cell Significance Index: 103.3600 - Cell Name: colon goblet cell (CL0009039)
Fold Change: 0.7353
Cell Significance Index: 72.7400 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 0.6292
Cell Significance Index: 124.8700 - Cell Name: sebum secreting cell (CL0000317)
Fold Change: 0.6038
Cell Significance Index: 42.7000 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: 0.5186
Cell Significance Index: 13.9000 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: 0.4883
Cell Significance Index: 25.6400 - Cell Name: vascular lymphangioblast (CL0005022)
Fold Change: 0.2897
Cell Significance Index: 5.1200 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: 0.2843
Cell Significance Index: 7.5900 - Cell Name: enteroendocrine cell of colon (CL0009042)
Fold Change: 0.1170
Cell Significance Index: 22.2700 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 0.0746
Cell Significance Index: 14.9600 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 0.0733
Cell Significance Index: 66.1700 - Cell Name: peg cell (CL4033014)
Fold Change: 0.0498
Cell Significance Index: 1.1500 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: 0.0276
Cell Significance Index: 20.9200 - Cell Name: paneth cell of epithelium of small intestine (CL1000343)
Fold Change: 0.0217
Cell Significance Index: 0.4700 - Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
Fold Change: 0.0038
Cell Significance Index: 2.7900 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: -0.0007
Cell Significance Index: -0.1200 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.0019
Cell Significance Index: -0.1900 - Cell Name: mesenchymal cell (CL0008019)
Fold Change: -0.0036
Cell Significance Index: -0.0600 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: -0.0056
Cell Significance Index: -0.1600 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0067
Cell Significance Index: -4.9500 - Cell Name: pancreatic PP cell (CL0002275)
Fold Change: -0.0081
Cell Significance Index: -5.0700 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: -0.0176
Cell Significance Index: -0.6200 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: -0.0206
Cell Significance Index: -38.8500 - Cell Name: pancreatic endocrine cell (CL0008024)
Fold Change: -0.0322
Cell Significance Index: -3.6800 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: -0.0327
Cell Significance Index: -1.4800 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: -0.0327
Cell Significance Index: -11.7200 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0502
Cell Significance Index: -28.3200 - Cell Name: GABAergic interneuron (CL0011005)
Fold Change: -0.0514
Cell Significance Index: -35.5800 - Cell Name: umbrella cell of urothelium (CL4030056)
Fold Change: -0.0532
Cell Significance Index: -0.4900 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.0541
Cell Significance Index: -11.4000 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: -0.0623
Cell Significance Index: -39.5700 - Cell Name: fibroblast of mammary gland (CL0002555)
Fold Change: -0.0754
Cell Significance Index: -2.1600 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: -0.0915
Cell Significance Index: -41.5500 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.1048
Cell Significance Index: -30.1400 - Cell Name: pro-T cell (CL0000827)
Fold Change: -0.1143
Cell Significance Index: -2.9200 - Cell Name: neutrophil progenitor cell (CL0000834)
Fold Change: -0.1239
Cell Significance Index: -3.3200 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.1480
Cell Significance Index: -16.9600 - Cell Name: theca cell (CL0000503)
Fold Change: -0.1906
Cell Significance Index: -1.1200 - Cell Name: transit amplifying cell of colon (CL0009011)
Fold Change: -0.2214
Cell Significance Index: -7.0900 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: -0.2709
Cell Significance Index: -7.5700 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: -0.2720
Cell Significance Index: -39.5400 - Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
Fold Change: -0.3477
Cell Significance Index: -27.5400 - Cell Name: Sertoli cell (CL0000216)
Fold Change: -0.3611
Cell Significance Index: -5.0700 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: -0.3798
Cell Significance Index: -39.5500 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: -0.3826
Cell Significance Index: -21.4700 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: -0.4518
Cell Significance Index: -27.7700 - Cell Name: luminal hormone-sensing cell of mammary gland (CL4033058)
Fold Change: -0.4521
Cell Significance Index: -2.7800 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: -0.4971
Cell Significance Index: -38.1500 - Cell Name: intestinal epithelial cell (CL0002563)
Fold Change: -0.5081
Cell Significance Index: -5.2600 - Cell Name: skeletal muscle fiber (CL0008002)
Fold Change: -0.5729
Cell Significance Index: -14.7300 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: -0.5825
Cell Significance Index: -36.7100 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: -0.6016
Cell Significance Index: -40.4500 - Cell Name: fallopian tube secretory epithelial cell (CL4030006)
Fold Change: -0.6308
Cell Significance Index: -9.7600 - Cell Name: mesodermal cell (CL0000222)
Fold Change: -0.6438
Cell Significance Index: -4.0300 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: -0.6444
Cell Significance Index: -39.5100 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: -0.6884
Cell Significance Index: -32.1000 - Cell Name: kidney epithelial cell (CL0002518)
Fold Change: -0.6970
Cell Significance Index: -20.5300 - Cell Name: fibro/adipogenic progenitor cell (CL0009099)
Fold Change: -0.7283
Cell Significance Index: -36.8100 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: -0.7319
Cell Significance Index: -38.0200 - Cell Name: stratified epithelial cell (CL0000079)
Fold Change: -0.7867
Cell Significance Index: -28.8800 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: -0.8286
Cell Significance Index: -36.6500 - Cell Name: basal cell of prostate epithelium (CL0002341)
Fold Change: -0.8597
Cell Significance Index: -23.4000 - Cell Name: endothelial cell of placenta (CL0009092)
Fold Change: -0.8706
Cell Significance Index: -5.2600 - Cell Name: retinal rod cell (CL0000604)
Fold Change: -0.9001
Cell Significance Index: -10.7300 - Cell Name: cerebellar granule cell (CL0001031)
Fold Change: -0.9383
Cell Significance Index: -16.0800
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 3419575640
Symbol: SPT4H_HUMAN
Name: Transcription elongation factor SPT4
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 8786137
Title: Isolation and characterization of the human and mouse homologues (SUPT4H and Supt4h) of the yeast SPT4 gene.
PubMed ID: 8786137
PubMed ID: 8649394
Title: Identification and analysis of a functional human homolog of the SPT4 gene of Saccharomyces cerevisiae.
PubMed ID: 8649394
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 9857195
Title: Evidence that P-TEFb alleviates the negative effect of DSIF on RNA polymerase II-dependent transcription in vitro.
PubMed ID: 9857195
PubMed ID: 9450929
Title: DSIF, a novel transcription elongation factor that regulates RNA polymerase II processivity, is composed of human Spt4 and Spt5 homologs.
PubMed ID: 9450929
DOI: 10.1101/gad.12.3.343
PubMed ID: 10199401
Title: NELF, a multisubunit complex containing RD, cooperates with DSIF to repress RNA polymerase II elongation.
PubMed ID: 10199401
PubMed ID: 10075709
Title: Structure and function of the human transcription elongation factor DSIF.
PubMed ID: 10075709
PubMed ID: 10454543
Title: Tat-SF1 protein associates with RAP30 and human SPT5 proteins.
PubMed ID: 10454543
PubMed ID: 10912001
Title: FACT relieves DSIF/NELF-mediated inhibition of transcriptional elongation and reveals functional differences between P-TEFb and TFIIH.
PubMed ID: 10912001
PubMed ID: 10757782
Title: Domains in the SPT5 protein that modulate its transcriptional regulatory properties.
PubMed ID: 10757782
PubMed ID: 11112772
Title: DSIF and NELF interact with RNA polymerase II elongation complex and HIV-1 Tat stimulates P-TEFb-mediated phosphorylation of RNA polymerase II and DSIF during transcription elongation.
PubMed ID: 11112772
PubMed ID: 11553615
Title: A highly purified RNA polymerase II elongation control system.
PubMed ID: 11553615
PubMed ID: 12653964
Title: Structure-function analysis of human Spt4: evidence that hSpt4 and hSpt5 exert their roles in transcriptional elongation as parts of the DSIF complex.
PubMed ID: 12653964
PubMed ID: 12718890
Title: Methylation of SPT5 regulates its interaction with RNA polymerase II and transcriptional elongation properties.
PubMed ID: 12718890
PubMed ID: 15380072
Title: Locus-specific requirements for Spt5 in transcriptional activation and repression in Drosophila.
PubMed ID: 15380072
PubMed ID: 15060154
Title: Human Spt6 stimulates transcription elongation by RNA polymerase II in vitro.
PubMed ID: 15060154
PubMed ID: 15136722
Title: Functional interactions of RNA-capping enzyme with factors that positively and negatively regulate promoter escape by RNA polymerase II.
PubMed ID: 15136722
PubMed ID: 16214896
Title: A negative elongation factor for human RNA polymerase II inhibits the anti-arrest transcript-cleavage factor TFIIS.
PubMed ID: 16214896
PubMed ID: 21269460
Title: Initial characterization of the human central proteome.
PubMed ID: 21269460
PubMed ID: 22814378
Title: N-terminal acetylome analyses and functional insights of the N-terminal acetyltransferase NatB.
PubMed ID: 22814378
PubMed ID: 37478862
Title: Orphan quality control shapes network dynamics and gene expression.
PubMed ID: 37478862
PubMed ID: 19860741
Title: Crystal structure of the human transcription elongation factor DSIF hSpt4 subunit in complex with the hSpt5 dimerization interface.
PubMed ID: 19860741
DOI: 10.1042/bj20091422
PubMed ID: 28892040
Title: Structure of a transcribing RNA polymerase II-DSIF complex reveals a multidentate DNA-RNA clamp.
PubMed ID: 28892040
DOI: 10.1038/nsmb.3465
Sequence Information:
- Length: 117
- Mass: 13193
- Checksum: 09EDF007501D0F03
- Sequence:
MALETVPKDL RHLRACLLCS LVKTIDQFEY DGCDNCDAYL QMKGNREMVY DCTSSSFDGI IAMMSPEDSW VSKWQRVSNF KPGVYAVSVT GRLPQGIVRE LKSRGVAYKS RDTAIKT
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.