Details for: TSPAN6
Gene ID: 7105
Gene Type: Protein-coding - A gene that serves as a template for producing a messenger RNA (mRNA) molecule, which is then translated into a functional protein.
Symbol: TSPAN6
Ensembl ID: ENSG00000000003
Description: tetraspanin 6
Selected Context(s): Overall
Cell Significance Landscape
Associated with
Significant Cells
Cell Significance Index (CSI) scores for the chosen context(s)
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CSI 47.08rCSI 39.3%PRS 91.5
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CSI 33.58rCSI 38.93%PRS 91.75
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CSI 31.1rCSI 32.51%PRS 95.95
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CSI 24.85rCSI 44.04%PRS 77.11
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CSI 24.32rCSI 21.38%PRS 92.55
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CSI 23.85rCSI 49.24%PRS 92.03
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CSI 23.82rCSI 33.69%PRS 92.64
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CSI 22.99rCSI 27.86%PRS 83.06
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CSI 22.54rCSI 30.72%PRS 77.98
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CSI 19.04rCSI 17.99%PRS 95.95
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CSI 18.41rCSI 30.05%PRS 78.22
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CSI 15.43rCSI 12.79%PRS 97.9
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CSI 14.22rCSI 15.58%PRS 97.94
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CSI 13.74rCSI 14.4%PRS 96.04
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CSI 13.68rCSI 21.76%PRS 94.93
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CSI 12.84rCSI 13.3%PRS 97.67
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CSI 11.92rCSI 28.29%PRS 93.84
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CSI 11.27rCSI 11.75%PRS 96.66
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CSI 10.39rCSI 25.71%PRS 98.07
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CSI 10.23rCSI 9.08%PRS 95.95
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CSI 9.82rCSI 14.4%PRS 98.55
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CSI 9.78rCSI 15.84%PRS 93.22
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CSI 9.66rCSI 13.38%PRS 95.63
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CSI 9.4rCSI 13.75%PRS 98.4
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CSI 9.2rCSI 19.09%PRS 96.3
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CSI 9.18rCSI 21.55%PRS 94.8
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CSI 9.16rCSI 23.26%PRS 95.74
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CSI 8.93rCSI 13.72%PRS 89.41
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CSI 8.73rCSI 10.09%PRS 94.27
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CSI 8.38rCSI 8.08%PRS 95.86
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CSI 8.28rCSI 10.3%PRS 96.45
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CSI 8.24rCSI 11.45%PRS 96.69
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CSI 8.23rCSI 45%PRS 94.61
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CSI 8.08rCSI 10.37%PRS 95.29
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CSI 8.08rCSI 6.39%PRS 94.82
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CSI 7.96rCSI 18.14%PRS 92.6
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CSI 7.88rCSI 10.03%PRS 98.56
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CSI 7.85rCSI 6.09%PRS 98.34
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CSI 7.83rCSI 7.54%PRS 96.3
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CSI 7.8rCSI 11.43%PRS 95.65
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CSI 7.7rCSI 8.18%PRS 97.43
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CSI 7.04rCSI 9.62%PRS 95.49
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CSI 7.03rCSI 10.75%PRS 98.07
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CSI 7.02rCSI 11.15%PRS 98.59
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CSI 6.96rCSI 6.94%PRS 94.12
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CSI 6.95rCSI 7.45%PRS 97.56
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CSI 6.9rCSI 7.97%PRS 93.13
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CSI 6.87rCSI 9.35%PRS 98.35
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CSI 6.72rCSI 10.72%PRS 93.26
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CSI 6.65rCSI 7.71%PRS 96.48
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CSI 6.61rCSI 12.61%PRS 99.3
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CSI 5.74rCSI 8.19%PRS 97.59
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CSI 5.06rCSI 20.23%PRS 98.29
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CSI 4.98rCSI 7.35%PRS 98.5
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CSI 4.95rCSI 5.94%PRS 97.48
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CSI 4.67rCSI 11.21%PRS 96.62
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CSI 4.57rCSI 6.48%PRS 96.28
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CSI 4.49rCSI 25.7%PRS 94.21
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CSI 4.42rCSI 7.23%PRS 94.2
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CSI 4.21rCSI 31.64%PRS 98.63
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CSI 4.16rCSI 4.89%PRS 97.55
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CSI 3.78rCSI 4.6%PRS 98.01
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CSI 3.73rCSI 6.67%PRS 95.58
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CSI 3.72rCSI 8.12%PRS 97.48
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CSI 3.72rCSI 7.9%PRS 93.36
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CSI 3.68rCSI 5.3%PRS 97.57
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CSI 3.62rCSI 12.23%PRS 93.14
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CSI 3.61rCSI 5.51%PRS 96.91
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CSI 3.49rCSI 8.29%PRS 97.36
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CSI 3.33rCSI 5.37%PRS 94.88
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CSI 3.18rCSI 4.86%PRS 96.36
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CSI 3.09rCSI 4.43%PRS 95.95
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CSI 3rCSI 5.19%PRS 95.01
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CSI 2.95rCSI 5.74%PRS 97.21
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CSI 2.91rCSI 7.52%PRS 96.1
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CSI 2.56rCSI 9.94%PRS 94.43
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CSI 2.5rCSI 8.03%PRS 96.94
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CSI 2.42rCSI 3.1%PRS 97.7
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CSI 2.24rCSI 6.89%PRS 97.42
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CSI 1.95rCSI 4.95%PRS 94.66
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CSI 1.8rCSI 4.95%PRS 98.09
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CSI 1.78rCSI 7.9%PRS 97.15
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CSI 1.66rCSI 8.29%PRS 96.08
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CSI 1.28rCSI 6.71%PRS 97.56
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CSI 1.09rCSI 32.6%PRS 99.17
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CSI 1rCSI 4.31%PRS 97.68
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CSI 0.98rCSI 4.32%PRS 97.97
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CSI 0.94rCSI 21.96%PRS 98.61
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CSI 0.93rCSI 8.82%PRS 99.65
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CSI 0.78rCSI 8.49%PRS 98.15
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CSI 0.65rCSI 6.4%PRS 94.76
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CSI 0.54rCSI 5.27%PRS 97.73
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Network Configuration
Explore relationships of the current gene. Select an Interaction Source: 'ONTOLOGY' for shared pathways (GO/Reactome) or 'STRING' for protein-protein interactions. Further refine by selecting context genes and comparing Cell Significance Index (CSI) scores between baseline and target cell types and their specific contexts.
Legend:
- Query Gene
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Node Color (Target Cell CSI, relative to current network):
- Very High
- High
- Medium
- Low
- Very Low
- CSI N/A
- Node Size: Proportional to Target Cell CSI magnitude
- STRING PPI Edge
- Shared Pathway Edge (ONTOLOGY)
Other Information
This section provides additional information about the gene, including a description generated by an AI language model and details about associated proteins.
Genular Protein ID: 3783405662
Symbol: TSN6_HUMAN
Name: Tetraspanin-6
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 9714763
Title: Sequences and expression of six new members of the tetraspanin/TM4SF family.
PubMed ID: 9714763
PubMed ID: 9782095
Title: Cloning and characterization of a novel human gene, TM4SF6, encoding a protein belonging to the transmembrane 4 superfamily, and mapped to Xq22.
PubMed ID: 9782095
PubMed ID: 12975309
Title: The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment.
PubMed ID: 12975309
DOI: 10.1101/gr.1293003
PubMed ID: 12761501
Title: Large-scale identification and characterization of human genes that activate NF-kappaB and MAPK signaling pathways.
PubMed ID: 12761501
PubMed ID: 15772651
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 21269460
Title: Initial characterization of the human central proteome.
PubMed ID: 21269460
Sequence Information:
- Length: 245
- Mass: 27563
- Checksum: 811FAB19C2805BE2
- Sequence:
MASPSRRLQT KPVITCFKSV LLIYTFIFWI TGVILLAVGI WGKVSLENYF SLLNEKATNV PFVLIATGTV IILLGTFGCF ATCRASAWML KLYAMFLTLV FLVELVAAIV GFVFRHEIKN SFKNNYEKAL KQYNSTGDYR SHAVDKIQNT LHCCGVTDYR DWTDTNYYSE KGFPKSCCKL EDCTPQRDAD KVNNEGCFIK VMTIIESEMG VVAGISFGVA CFQLIGIFLA YCLSRAITNN QYEIV
Genular Protein ID: 3875297590
Symbol: A0A087WYV6_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 11237011
Title: Initial sequencing and analysis of the human genome.
PubMed ID: 11237011
DOI: 10.1038/35057062
PubMed ID: 15496913
Title: Finishing the euchromatic sequence of the human genome.
PubMed ID: 15496913
DOI: 10.1038/nature03001
PubMed ID: 15772651
PubMed ID: 21269460
Title: Initial characterization of the human central proteome.
PubMed ID: 21269460
Sequence Information:
- Length: 129
- Mass: 14958
- Checksum: A91152BDA837BB74
- Sequence:
MLKLYAMFLT LVFLVELVAA IVGFVFRHEI KNSFKNNYEK ALKQYNSTGD YRSHAVDKIQ NTLHCCGVTD YRDWTDTNYY SEKGFPKSCC KLEDCTPQRD ADKVNNELIG IFLAYCLSRA ITNNQYEIV