Details for: SUCLA2

Gene ID: 8803

Gene Type:  Protein-coding  - A gene that serves as a template for producing a messenger RNA (mRNA) molecule, which is then translated into a functional protein.

Symbol: SUCLA2

Ensembl ID: ENSG00000136143

Description: succinate-CoA ligase ADP-forming subunit beta

Cell Significance Landscape

Associated with

Significant Cells

Cell Significance Index (CSI) scores for the chosen context(s)

  • alveolar type 1 fibroblast cell CL4028004
    CSI 8.77
    rCSI 9.61%
    PRS 41.81
  • M cell of gut CL0000682
    CSI 8
    rCSI 8.5%
    PRS 53.76
  • megakaryocyte-erythroid progenitor cell CL0000050
    CSI 7.96
    rCSI 7.19%
    PRS 34.93
  • retinal ganglion cell CL0000740
    CSI 7.88
    rCSI 17.42%
    PRS 28.1
  • multi-ciliated epithelial cell CL0005012
    CSI 7.87
    rCSI 7.85%
    PRS 32.83
  • transit amplifying cell CL0009010
    CSI 7.23
    rCSI 11.07%
    PRS 54.25
  • pancreatic ductal cell CL0002079
    CSI 6.81
    rCSI 13.24%
    PRS 39.58
  • sncg GABAergic cortical interneuron CL4023015
    CSI 5.72
    rCSI 9.2%
    PRS 26.43
  • myoepithelial cell CL0000185
    CSI 5.07
    rCSI 12.82%
    PRS 45.64
  • lung ciliated cell CL1000271
    CSI 3.99
    rCSI 4.62%
    PRS 29.27
  • effector CD4-positive, alpha-beta T cell CL0001044
    CSI 3.21
    rCSI 9.22%
    PRS 54.21
  • mesenchymal cell CL0008019
    CSI 3.07
    rCSI 7.79%
    PRS 35.23
  • perivascular cell CL4033054
    CSI 3.03
    rCSI 4.14%
    PRS 42.44
  • retina horizontal cell CL0000745
    CSI 2.96
    rCSI 4.5%
    PRS 35.15
  • mesodermal cell CL0000222
    CSI 2.89
    rCSI 3.47%
    PRS 36.34
  • pro-B cell CL0000826
    CSI 2.86
    rCSI 2.37%
    PRS 38.78
  • VIP GABAergic cortical interneuron CL4023016
    CSI 2.84
    rCSI 3.39%
    PRS 24.48
  • epithelial cell of lower respiratory tract CL0002632
    CSI 2.81
    rCSI 2.18%
    PRS 37.93
  • blood vessel smooth muscle cell CL0019018
    CSI 2.79
    rCSI 22.69%
    PRS 33.84
  • kidney loop of Henle thin descending limb epithelial cell CL1001111
    CSI 2.75
    rCSI 3.9%
    PRS 35.49
  • alpha-beta T cell CL0000789
    CSI 2.74
    rCSI 3.2%
    PRS 52.23
  • cerebellar granule cell CL0001031
    CSI 2.7
    rCSI 3.96%
    PRS 34.84
  • enterocyte CL0000584
    CSI 2.69
    rCSI 4.33%
    PRS 47.98
  • fallopian tube secretory epithelial cell CL4030006
    CSI 2.67
    rCSI 2.57%
    PRS 38.66
  • central memory CD4-positive, alpha-beta T cell CL0000904
    CSI 2.67
    rCSI 1.58%
    PRS 51.54
  • direct pathway medium spiny neuron CL4023026
    CSI 2.67
    rCSI 63.9%
    PRS 23.92
  • Schwann cell CL0002573
    CSI 2.61
    rCSI 7.43%
    PRS 38.43
  • indirect pathway medium spiny neuron CL4023029
    CSI 2.57
    rCSI 61.94%
    PRS 24.76
  • double negative thymocyte CL0002489
    CSI 2.56
    rCSI 1.78%
    PRS 45.55
  • adipocyte CL0000136
    CSI 2.54
    rCSI 3.26%
    PRS 34.75
  • plasmacytoid dendritic cell, human CL0001058
    CSI 2.5
    rCSI 1.74%
    PRS 39.71
  • granulocyte monocyte progenitor cell CL0000557
    CSI 2.5
    rCSI 2.16%
    PRS 41.69
  • CD4-positive helper T cell CL0000492
    CSI 2.46
    rCSI 1.86%
    PRS 49.42
  • ON midget ganglion cell CL4033046
    CSI 2.46
    rCSI 50.13%
    PRS 31.78
  • lamp5 GABAergic cortical interneuron CL4023011
    CSI 2.46
    rCSI 4.13%
    PRS 24.52
  • enteroendocrine cell CL0000164
    CSI 2.43
    rCSI 3.32%
    PRS 40.71
  • melanocyte CL0000148
    CSI 2.42
    rCSI 1.79%
    PRS 32.57
  • ON-bipolar cell CL0000749
    CSI 2.42
    rCSI 3.6%
    PRS 41.21
  • brush cell of tracheobronchial tree CL0002075
    CSI 2.4
    rCSI 7.13%
    PRS 49.26
  • early lymphoid progenitor CL0000936
    CSI 2.4
    rCSI 2.11%
    PRS 42.7
  • nasal mucosa goblet cell CL0002480
    CSI 2.4
    rCSI 2.78%
    PRS 48.85
  • bronchus fibroblast of lung CL2000093
    CSI 2.37
    rCSI 1.92%
    PRS 38.91
  • myeloid leukocyte CL0000766
    CSI 2.32
    rCSI 2.14%
    PRS 39.05
  • choroid plexus epithelial cell CL0000706
    CSI 2.32
    rCSI 3.79%
    PRS 29.99
  • OFF midget ganglion cell CL4033047
    CSI 2.3
    rCSI 46.83%
    PRS 32.99
  • lung neuroendocrine cell CL1000223
    CSI 2.28
    rCSI 3.37%
    PRS 42.37
  • OFF-bipolar cell CL0000750
    CSI 2.28
    rCSI 3.11%
    PRS 48.51
  • skin fibroblast CL0002620
    CSI 2.26
    rCSI 1.95%
    PRS 47.53
  • conjunctival epithelial cell CL1000432
    CSI 2.21
    rCSI 3.37%
    PRS 38.36
  • BEST4+ enteroycte CL4030026
    CSI 2.19
    rCSI 2.73%
    PRS 40.42
  • fibroblast of lung CL0002553
    CSI 2.16
    rCSI 2.01%
    PRS 37.77
  • radial glial cell CL0000681
    CSI 2.16
    rCSI 3%
    PRS 37.84
  • hepatic stellate cell CL0000632
    CSI 2.15
    rCSI 8.06%
    PRS 32.31
  • central memory CD8-positive, alpha-beta T cell CL0000907
    CSI 2.11
    rCSI 1.42%
    PRS 47.04
  • pulmonary alveolar type 1 cell CL0002062
    CSI 2.09
    rCSI 12.06%
    PRS 41.03
  • renal alpha-intercalated cell CL0005011
    CSI 2.04
    rCSI 2.73%
    PRS 45.82
  • pancreatic D cell CL0000173
    CSI 2
    rCSI 1.97%
    PRS 40.21
  • retinal pigment epithelial cell CL0002586
    CSI 1.94
    rCSI 3.85%
    PRS 37.85
  • Kupffer cell CL0000091
    CSI 1.94
    rCSI 4.43%
    PRS 37.44
  • secretory cell CL0000151
    CSI 1.92
    rCSI 2%
    PRS 38.59
  • hematopoietic stem cell CL0000037
    CSI 1.91
    rCSI 1.27%
    PRS 42.08
  • colonocyte CL1000347
    CSI 1.9
    rCSI 2.73%
    PRS 45.83
  • pancreatic A cell CL0000171
    CSI 1.89
    rCSI 1.98%
    PRS 40.24
  • renal interstitial pericyte CL1001318
    CSI 1.87
    rCSI 5.16%
    PRS 35.35
  • precursor B cell CL0000817
    CSI 1.87
    rCSI 1.64%
    PRS 47.32
  • Mueller cell CL0000636
    CSI 1.84
    rCSI 4.21%
    PRS 32.6
  • stem cell CL0000034
    CSI 1.8
    rCSI 1.73%
    PRS 29.67
  • stromal cell CL0000499
    CSI 1.78
    rCSI 5.01%
    PRS 40.06
  • hepatocyte CL0000182
    CSI 1.72
    rCSI 3.08%
    PRS 36.33
  • sst GABAergic cortical interneuron CL4023017
    CSI 1.71
    rCSI 2.2%
    PRS 25.37
  • squamous epithelial cell CL0000076
    CSI 1.69
    rCSI 4.02%
    PRS 43.68
  • cerebral cortex endothelial cell CL1001602
    CSI 1.69
    rCSI 2.93%
    PRS 29.88
  • ciliated cell CL0000064
    CSI 1.65
    rCSI 2.67%
    PRS 36.94
  • blood vessel endothelial cell CL0000071
    CSI 1.63
    rCSI 3.39%
    PRS 36.53
  • L4 intratelencephalic projecting glutamatergic neuron CL4030063
    CSI 1.62
    rCSI 3.87%
    PRS 28.77
  • retinal bipolar neuron CL0000748
    CSI 1.61
    rCSI 3.02%
    PRS 29.13
  • lymphoid lineage restricted progenitor cell CL0000838
    CSI 1.6
    rCSI 6.25%
    PRS 57.43
  • double-positive, alpha-beta thymocyte CL0000809
    CSI 1.6
    rCSI 1.63%
    PRS 50.11
  • interneuron CL0000099
    CSI 1.59
    rCSI 3.19%
    PRS 29.16
  • cerebral cortex GABAergic interneuron CL0010011
    CSI 1.59
    rCSI 4.68%
    PRS 42.2
  • colon epithelial cell CL0011108
    CSI 1.57
    rCSI 1.64%
    PRS 35.59
  • ionocyte CL0005006
    CSI 1.57
    rCSI 1.68%
    PRS 35.83
  • neuroblast (sensu Nematoda and Protostomia) CL0000338
    CSI 1.56
    rCSI 1.8%
    PRS 33.16
  • intestinal epithelial cell CL0002563
    CSI 1.56
    rCSI 1.63%
    PRS 37.9
  • neural crest cell CL0011012
    CSI 1.55
    rCSI 1.23%
    PRS 27.25
  • cerebral cortex neuron CL0010012
    CSI 1.52
    rCSI 6.2%
    PRS 36.72
  • mature T cell CL0002419
    CSI 1.52
    rCSI 1.18%
    PRS 53.41
  • transit amplifying cell of colon CL0009011
    CSI 1.52
    rCSI 1.78%
    PRS 41.83
  • renal beta-intercalated cell CL0002201
    CSI 1.5
    rCSI 3.57%
    PRS 40.71
  • retinal rod cell CL0000604
    CSI 1.43
    rCSI 2.52%
    PRS 36.77
  • fibroblast of cardiac tissue CL0002548
    CSI 1.42
    rCSI 6.82%
    PRS 36.06
  • common dendritic progenitor CL0001029
    CSI 1.4
    rCSI 1.75%
    PRS 47.02
  • vascular leptomeningeal cell CL4023051
    CSI 1.39
    rCSI 2.43%
    PRS 31.2
  • pulmonary ionocyte CL0017000
    CSI 1.38
    rCSI 1.68%
    PRS 45.11
  • kidney interstitial alternatively activated macrophage CL1000695
    CSI 1.38
    rCSI 3.6%
    PRS 37.07
  • chondrocyte CL0000138
    CSI 1.38
    rCSI 2.19%
    PRS 32.19
  • parietal epithelial cell CL1000452
    CSI 1.38
    rCSI 3.68%
    PRS 32.18
  • astrocyte of the cerebral cortex CL0002605
    CSI 1.37
    rCSI 3.07%
    PRS 25.04
  • Bergmann glial cell CL0000644
    CSI 1.37
    rCSI 1.87%
    PRS 35.47
  • large pre-B-II cell CL0000957
    CSI 1.35
    rCSI 3.86%
    PRS 53.02
  • pluripotent stem cell CL0002248
    CSI 0.1
    rCSI 4.1%
    PRS 63.4%
  • enterocyte of epithelium of small intestine CL1000334
    CSI 0.3
    rCSI 4.3%
    PRS 65.8%
  • corticothalamic-projecting glutamatergic cortical neuron CL4023013
    CSI 0.3
    rCSI 1.8%
    PRS 25.7%
  • P/D1 enteroendocrine cell CL0002268
    CSI 0.3
    rCSI 1.7%
    PRS 62.0%
  • regular ventricular cardiac myocyte CL0002131
    CSI 0.3
    rCSI 2.1%
    PRS 31.6%
  • myeloid lineage restricted progenitor cell CL0000839
    CSI 0.4
    rCSI 1.8%
    PRS 62.0%
  • Cajal-Retzius cell CL0000695
    CSI 0.4
    rCSI 2.8%
    PRS 56.2%
  • ON parasol ganglion cell CL4033052
    CSI 0.4
    rCSI 5.4%
    PRS 31.6%
  • intestinal crypt stem cell of colon CL0009043
    CSI 0.4
    rCSI 3.0%
    PRS 58.6%
  • near-projecting glutamatergic cortical neuron CL4023012
    CSI 0.4
    rCSI 1.5%
    PRS 25.4%
  • H2 horizontal cell CL0004218
    CSI 0.4
    rCSI 2.1%
    PRS 38.3%
  • central nervous system neuron CL2000029
    CSI 0.4
    rCSI 3.2%
    PRS 27.4%
  • L6b glutamatergic cortical neuron CL4023038
    CSI 0.5
    rCSI 1.5%
    PRS 25.6%
  • GABAergic amacrine cell CL4030027
    CSI 0.6
    rCSI 1.9%
    PRS 31.3%
  • podocyte CL0000653
    CSI 0.6
    rCSI 2.5%
    PRS 36.6%
  • lung secretory cell CL1000272
    CSI 0.6
    rCSI 1.4%
    PRS 36.2%
  • microcirculation associated smooth muscle cell CL0008035
    CSI 0.6
    rCSI 1.7%
    PRS 40.7%
  • L5/6 near-projecting glutamatergic neuron CL4030067
    CSI 0.6
    rCSI 2.0%
    PRS 28.3%
  • type B pancreatic cell CL0000169
    CSI 0.6
    rCSI 1.4%
    PRS 35.3%
  • L2/3-6 intratelencephalic projecting glutamatergic neuron CL4023040
    CSI 0.6
    rCSI 1.5%
    PRS 23.8%
  • endothelial cell of placenta CL0009092
    CSI 0.7
    rCSI 3.2%
    PRS 48.8%
  • GABAergic neuron CL0000617
    CSI 0.7
    rCSI 2.3%
    PRS 28.3%
  • S cone cell CL0003050
    CSI 0.7
    rCSI 3.2%
    PRS 35.4%
  • paneth cell of epithelium of small intestine CL1000343
    CSI 0.7
    rCSI 2.0%
    PRS 52.9%
  • enterocyte of epithelium of large intestine CL0002071
    CSI 0.7
    rCSI 3.9%
    PRS 53.6%
  • transit amplifying cell of small intestine CL0009012
    CSI 0.8
    rCSI 3.4%
    PRS 57.8%
  • retinal cone cell CL0000573
    CSI 0.8
    rCSI 1.3%
    PRS 29.9%
  • glial cell CL0000125
    CSI 0.8
    rCSI 3.0%
    PRS 33.2%
  • glycinergic amacrine cell CL4030028
    CSI 0.8
    rCSI 2.1%
    PRS 38.1%
  • IgA plasma cell CL0000987
    CSI 0.8
    rCSI 0.8%
    PRS 56.7%
  • paneth cell CL0000510
    CSI 0.8
    rCSI 1.2%
    PRS 54.7%
  • intestinal crypt stem cell of small intestine CL0009017
    CSI 0.8
    rCSI 2.2%
    PRS 46.8%
  • chandelier pvalb GABAergic cortical interneuron CL4023036
    CSI 0.8
    rCSI 2.6%
    PRS 27.6%
  • placental villous trophoblast CL2000060
    CSI 0.9
    rCSI 1.3%
    PRS 36.2%
  • Langerhans cell CL0000453
    CSI 0.9
    rCSI 1.3%
    PRS 55.5%
  • kidney connecting tubule epithelial cell CL1000768
    CSI 0.9
    rCSI 2.2%
    PRS 29.9%
  • regular atrial cardiac myocyte CL0002129
    CSI 0.9
    rCSI 2.9%
    PRS 37.9%
  • L2/3 intratelencephalic projecting glutamatergic neuron CL4030059
    CSI 0.9
    rCSI 2.0%
    PRS 29.4%
  • L5 extratelencephalic projecting glutamatergic cortical neuron CL4023041
    CSI 1.0
    rCSI 3.5%
    PRS 23.5%
  • lung pericyte CL0009089
    CSI 1.0
    rCSI 2.6%
    PRS 44.7%
  • caudal ganglionic eminence derived cortical interneuron CL4023064
    CSI 1.0
    rCSI 1.7%
    PRS 23.6%
  • common myeloid progenitor CL0000049
    CSI 1.0
    rCSI 0.8%
    PRS 38.5%
  • rod bipolar cell CL0000751
    CSI 1.0
    rCSI 1.8%
    PRS 32.2%
  • mucus secreting cell CL0000319
    CSI 1.0
    rCSI 1.6%
    PRS 47.6%
  • duct epithelial cell CL0000068
    CSI 1.0
    rCSI 1.5%
    PRS 40.6%
  • alveolar adventitial fibroblast CL4028006
    CSI 1.0
    rCSI 1.6%
    PRS 38.8%
  • forebrain radial glial cell CL0013000
    CSI 1.1
    rCSI 3.5%
    PRS 46.2%
  • pvalb GABAergic cortical interneuron CL4023018
    CSI 1.1
    rCSI 1.4%
    PRS 23.2%
  • keratinocyte CL0000312
    CSI 1.1
    rCSI 0.9%
    PRS 43.1%
  • amacrine cell CL0000561
    CSI 1.1
    rCSI 3.2%
    PRS 30.7%
  • kidney distal convoluted tubule epithelial cell CL1000849
    CSI 1.1
    rCSI 11.8%
    PRS 40.6%
  • neuron CL0000540
    CSI 1.1
    rCSI 3.0%
    PRS 31.5%
  • kidney loop of Henle thin ascending limb epithelial cell CL1001107
    CSI 1.1
    rCSI 2.9%
    PRS 34.8%
  • basal cell CL0000646
    CSI 1.1
    rCSI 1.5%
    PRS 39.7%
  • tracheobronchial smooth muscle cell CL0019019
    CSI 1.1
    rCSI 2.0%
    PRS 46.3%
  • enteric smooth muscle cell CL0002504
    CSI 1.2
    rCSI 1.6%
    PRS 40.7%
  • acinar cell CL0000622
    CSI 1.2
    rCSI 1.7%
    PRS 48.4%
  • differentiation-committed oligodendrocyte precursor CL4023059
    CSI 1.2
    rCSI 2.2%
    PRS 32.9%
  • epicardial adipocyte CL1000309
    CSI 1.2
    rCSI 3.9%
    PRS 40.6%
  • epithelial cell of proximal tubule CL0002306
    CSI 1.2
    rCSI 2.9%
    PRS 35.0%
  • inhibitory interneuron CL0000498
    CSI 1.2
    rCSI 2.8%
    PRS 31.2%
  • glioblast CL0000030
    CSI 1.2
    rCSI 2.0%
    PRS 32.7%
  • neuroblast (sensu Vertebrata) CL0000031
    CSI 1.3
    rCSI 1.6%
    PRS 36.2%
  • cardiac neuron CL0010022
    CSI 1.3
    rCSI 4.1%
    PRS 35.0%
  • retinal blood vessel endothelial cell CL0002585
    CSI 1.3
    rCSI 2.1%
    PRS 41.2%
  • granulocyte CL0000094
    CSI 1.3
    rCSI 2.0%
    PRS 46.6%
  • CD14-low, CD16-positive monocyte CL0002396
    CSI 1.3
    rCSI 1.0%
    PRS 36.5%
  • glutamatergic neuron CL0000679
    CSI 1.3
    rCSI 2.7%
    PRS 34.1%
  • cardiac muscle cell CL0000746
    CSI 1.3
    rCSI 1.9%
    PRS 30.6%
  • intestinal tuft cell CL0019032
    CSI 1.3
    rCSI 2.0%
    PRS 42.3%
  • ciliated epithelial cell CL0000067
    CSI 1.3
    rCSI 1.2%
    PRS 28.6%
  • cardiac endothelial cell CL0010008
    CSI 1.3
    rCSI 5.4%
    PRS 36.7%
  • peripheral nervous system neuron CL2000032
    CSI 1.3
    rCSI 1.8%
    PRS 32.7%
  • small intestine goblet cell CL1000495
    CSI 1.3
    rCSI 2.9%
    PRS 47.7%
  • extravillous trophoblast CL0008036
    CSI 1.3
    rCSI 1.7%
    PRS 34.2%
  • large pre-B-II cell CL0000957
    CSI 1.4
    rCSI 3.9%
    PRS 53.0%
  • Bergmann glial cell CL0000644
    CSI 1.4
    rCSI 1.9%
    PRS 35.5%
  • astrocyte of the cerebral cortex CL0002605
    CSI 1.4
    rCSI 3.1%
    PRS 25.0%
  • parietal epithelial cell CL1000452
    CSI 1.4
    rCSI 3.7%
    PRS 32.2%
  • chondrocyte CL0000138
    CSI 1.4
    rCSI 2.2%
    PRS 32.2%
  • kidney interstitial alternatively activated macrophage CL1000695
    CSI 1.4
    rCSI 3.6%
    PRS 37.1%
  • pulmonary ionocyte CL0017000
    CSI 1.4
    rCSI 1.7%
    PRS 45.1%
  • vascular leptomeningeal cell CL4023051
    CSI 1.4
    rCSI 2.4%
    PRS 31.2%
  • common dendritic progenitor CL0001029
    CSI 1.4
    rCSI 1.8%
    PRS 47.0%
  • fibroblast of cardiac tissue CL0002548
    CSI 1.4
    rCSI 6.8%
    PRS 36.1%
  • retinal rod cell CL0000604
    CSI 1.4
    rCSI 2.5%
    PRS 36.8%
  • renal beta-intercalated cell CL0002201
    CSI 1.5
    rCSI 3.6%
    PRS 40.7%
  • transit amplifying cell of colon CL0009011
    CSI 1.5
    rCSI 1.8%
    PRS 41.8%
  • mature T cell CL0002419
    CSI 1.5
    rCSI 1.2%
    PRS 53.4%
  • cerebral cortex neuron CL0010012
    CSI 1.5
    rCSI 6.2%
    PRS 36.7%
  • neural crest cell CL0011012
    CSI 1.6
    rCSI 1.2%
    PRS 27.3%
  • intestinal epithelial cell CL0002563
    CSI 1.6
    rCSI 1.6%
    PRS 37.9%
  • neuroblast (sensu Nematoda and Protostomia) CL0000338
    CSI 1.6
    rCSI 1.8%
    PRS 33.2%
  • ionocyte CL0005006
    CSI 1.6
    rCSI 1.7%
    PRS 35.8%
  • colon epithelial cell CL0011108
    CSI 1.6
    rCSI 1.6%
    PRS 35.6%
  • cerebral cortex GABAergic interneuron CL0010011
    CSI 1.6
    rCSI 4.7%
    PRS 42.2%
  • interneuron CL0000099
    CSI 1.6
    rCSI 3.2%
    PRS 29.2%
  • double-positive, alpha-beta thymocyte CL0000809
    CSI 1.6
    rCSI 1.6%
    PRS 50.1%
  • lymphoid lineage restricted progenitor cell CL0000838
    CSI 1.6
    rCSI 6.3%
    PRS 57.4%
  • retinal bipolar neuron CL0000748
    CSI 1.6
    rCSI 3.0%
    PRS 29.1%

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Network Configuration

Explore relationships of the current gene. Select an Interaction Source: 'ONTOLOGY' for shared pathways (GO/Reactome) or 'STRING' for protein-protein interactions. Further refine by selecting context genes and comparing Cell Significance Index (CSI) scores between baseline and target cell types and their specific contexts.

Comma-separated if multiple.
Comma-separated if multiple.

Legend:
  • Query Gene
  • Node Color (Target Cell CSI, relative to current network):
    • Very High
    • High
    • Medium
    • Low
    • Very Low
    • CSI N/A
  • Node Size: Proportional to Target Cell CSI magnitude
  • STRING PPI Edge
  • Shared Pathway Edge (ONTOLOGY)

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Other Information

This section provides additional information about the gene, including a description generated by an AI language model and details about associated proteins.

## Summary Analyzed for its expression specificity (CSI Z-Score), [SUCLA2](/details-gene/8803) is identified as a ubiquitously expressed gene with no significant specificity for any particular cell type. Its function as the beta subunit of the ADP-forming succinate-CoA ligase, a critical enzyme in the mitochondrial tricarboxylic acid (TCA) cycle, is consistent with its broad, housekeeping role in cellular energy metabolism. Mutations in [SUCLA2](/details-gene/8803) are known to cause severe mitochondrial encephalomyopathy, highlighting its fundamental importance in cellular function, particularly in high-energy-demand tissues. ## Cellular Roles and Expression Landscape The expression profile of [SUCLA2](/details-gene/8803), when evaluated for cell-type specificity, reveals a complete lack of enrichment in any single cell population. In the **Overall** context, the CSI (Z-SCORE) is 0.00 for all listed cell types, with low to moderate percentile rank scores (PRS) generally ranging from 25% to 55%. This pattern strongly suggests that [SUCLA2](/details-gene/8803) is a housekeeping gene, whose expression is a basal requirement across a diverse array of cell lineages. The list of top-expressing cells, despite the lack of specificity, includes metabolically active and functionally diverse populations such as [retinal ganglion cell](/details-cell/CL0000740), [pancreatic ductal cell](/details-cell/CL0002079), and [megakaryocyte-erythroid progenitor cell](/details-cell/CL0000050). This broad distribution underscores its fundamental role in providing energy via the TCA cycle, a process essential for nearly all cell types. The absence of any cell type with specific, high-level expression of [SUCLA2](/details-gene/8803) reinforces the conclusion that its regulation is likely tied to overall cellular metabolic rate rather than a specialized cellular function. ## Pathways and Molecular Function The functional annotations for [SUCLA2](/details-gene/8803) align perfectly with its observed ubiquitous expression pattern. As a core component of the succinate-CoA ligase complex ([GO:0042709](https://www.ebi.ac.uk/QuickGO/term/GO:0042709)) located in the mitochondrial matrix ([GO:0005759](https://www.ebi.ac.uk/QuickGO/term/GO:0005759)), it catalyzes a key, energy-conserving step in the TCA cycle ([GO:0006099](https://www.ebi.ac.uk/QuickGO/term/GO:0006099)). This pathway, also known as the Citric Acid Cycle ([R-HSA-71403](https://reactome.org/content/detail/R-HSA-71403)), is central to aerobic respiration and cellular metabolism ([R-HSA-1430728](https://reactome.org/content/detail/R-HSA-1430728)). Its molecular function involves succinate-CoA ligase (ADP-forming) activity ([GO:0004775](https://www.ebi.ac.uk/QuickGO/term/GO:0004775)) and ATP binding ([GO:0005524](https://www.ebi.ac.uk/QuickGO/term/GO:0005524)), directly linking substrate-level phosphorylation in the TCA cycle to the cell's energy pool. Pathogenic mutations in [SUCLA2](/details-gene/8803) lead to mitochondrial DNA depletion and encephalomyopathy, often associated with elevated methylmalonic acid (PubMed: [15877282](https://pubmed.ncbi.nlm.nih.gov/15877282/), [17287286](https://pubmed.ncbi.nlm.nih.gov/17287286/), [17301081](https://pubmed.ncbi.nlm.nih.gov/17301081/)). This clinical outcome underscores the critical, non-redundant role of [SUCLA2](/details-gene/8803) in maintaining mitochondrial health and function, particularly in neuronal tissues which are highly dependent on aerobic metabolism. ## Research Directions Given that [SUCLA2](/details-gene/8803) is a fundamental housekeeping gene, research should focus on understanding the cell-type-specific consequences of its dysfunction and its potential non-canonical roles. ### Testable Hypotheses: 1. **Hypothesis:** Although ubiquitously expressed, cells with the highest energy demands, such as [retinal ganglion cell](/details-cell/CL0000740) and [sncg GABAergic cortical interneuron](/details-cell/CL4023015), are exquisitely sensitive to subtle reductions in [SUCLA2](/details-gene/8803) activity, leading to disproportionately severe mitochondrial dysfunction compared to lower-energy-demand cells like fibroblasts. * **Experimental Approach:** Utilize CRISPRi to achieve a partial knockdown (e.g., 50%) of [SUCLA2](/details-gene/8803) in iPSC-derived retinal ganglion cells and cortical interneurons versus iPSC-derived fibroblasts. Assess mitochondrial health via Seahorse metabolic flux analysis, measurement of reactive oxygen species (ROS), and quantification of mitochondrial DNA copy number by qPCR. 2. **Hypothesis:** The detection of [SUCLA2](/details-gene/8803) in extracellular exosomes ([GO:0070062](https://www.ebi.ac.uk/QuickGO/term/GO:0070062)) is not a constitutive process but is instead an active cellular response to mitochondrial stress. Under conditions like hypoxia or toxin-induced damage, stressed cells package and release [SUCLA2](/details-gene/8803) in exosomes as a potential biomarker of mitochondrial damage. * **Experimental Approach:** Culture a cell line with high metabolic activity, such as [pancreatic ductal cell](/details-cell/CL0002079), under both normoxic and hypoxic conditions. Isolate exosomes from the conditioned media and perform quantitative Western blotting or targeted mass spectrometry to measure the relative abundance of [SUCLA2](/details-gene/8803). 3. **Hypothesis:** In [megakaryocyte-erythroid progenitor cell](/details-cell/CL0000050), the physical interaction between SUCLA2 and the heme-biosynthetic enzyme ALAS2, as previously reported in the literature (PubMed: [10727444](https://pubmed.ncbi.nlm.nih.gov/10727444/)), is dynamically regulated during erythroid differentiation to directly couple TCA cycle flux with the metabolic demands of heme synthesis. * **Experimental Approach:** Induce erythroid differentiation in a human [megakaryocyte-erythroid progenitor cell](/details-cell/CL0000050) line. At key differentiation time points, perform co-immunoprecipitation (Co-IP) to assess the interaction between SUCLA2 and ALAS2. Further visualize this interaction in situ using a Proximity Ligation Assay (PLA). ### Therapeutic Potential: Direct systemic targeting of [SUCLA2](/details-gene/8803) is likely unfeasible due to its essential housekeeping function. However, the severe monogenic disorders associated with its deficiency, such as SUCLA2-related mitochondrial DNA depletion syndrome ([OMIM: 612073](https://omim.org/entry/612073)), make it a prime candidate for gene replacement therapies using AAV vectors, particularly those with tropism for the central nervous system. Furthermore, if its presence in exosomes is validated as a robust biomarker of mitochondrial stress, it could be developed into a non-invasive diagnostic tool for monitoring mitochondrial diseases or drug-induced mitochondrial toxicity.

Genular Protein ID: 4259264958

Symbol: SUCB1_HUMAN

Name: N/A

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 10727444

Title: Interaction between succinyl CoA synthetase and the heme-biosynthetic enzyme ALAS-E is disrupted in sideroblastic anemia.

PubMed ID: 10727444

DOI: 10.1172/jci6816

PubMed ID: 14702039

Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.

PubMed ID: 14702039

DOI: 10.1038/ng1285

PubMed ID: 15057823

Title: The DNA sequence and analysis of human chromosome 13.

PubMed ID: 15057823

DOI: 10.1038/nature02379

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 9765291

Title: Genetic evidence for the expression of ATP- and GTP-specific succinyl-CoA synthetases in multicellular eucaryotes.

PubMed ID: 9765291

DOI: 10.1074/jbc.273.42.27580

PubMed ID: 10508479

Title: Antigens recognized by autologous antibody in patients with renal-cell carcinoma.

PubMed ID: 10508479

DOI: 10.1002/(sici)1097-0215(19991112)83:4<456::aid-ijc4>3.0.co;2-5

PubMed ID: 14643893

Title: The major splice variant of human 5-aminolevulinate synthase-2 contributes significantly to erythroid heme biosynthesis.

PubMed ID: 14643893

DOI: 10.1016/s1357-2725(03)00246-2

PubMed ID: 15877282

Title: Deficiency of the ADP-forming succinyl-CoA synthase activity is associated with encephalomyopathy and mitochondrial DNA depletion.

PubMed ID: 15877282

DOI: 10.1086/430843

PubMed ID: 15592455

Title: Immunoaffinity profiling of tyrosine phosphorylation in cancer cells.

PubMed ID: 15592455

DOI: 10.1038/nbt1046

PubMed ID: 17287286

Title: Mitochondrial encephalomyopathy with elevated methylmalonic acid is caused by SUCLA2 mutations.

PubMed ID: 17287286

DOI: 10.1093/brain/awl383

PubMed ID: 19608861

Title: Lysine acetylation targets protein complexes and co-regulates major cellular functions.

PubMed ID: 19608861

DOI: 10.1126/science.1175371

PubMed ID: 21269460

Title: Initial characterization of the human central proteome.

PubMed ID: 21269460

DOI: 10.1186/1752-0509-5-17

PubMed ID: 24275569

Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.

PubMed ID: 24275569

DOI: 10.1016/j.jprot.2013.11.014

PubMed ID: 25944712

Title: N-terminome analysis of the human mitochondrial proteome.

PubMed ID: 25944712

DOI: 10.1002/pmic.201400617

PubMed ID: 17301081

Title: SUCLA2 mutations are associated with mild methylmalonic aciduria, Leigh-like encephalomyopathy, dystonia and deafness.

PubMed ID: 17301081

DOI: 10.1093/brain/awl389

PubMed ID: 23759946

Title: The novel mutation p.Asp251Asn in the beta-subunit of succinate-CoA ligase causes encephalomyopathy and elevated succinylcarnitine.

PubMed ID: 23759946

DOI: 10.1038/jhg.2013.45

Sequence Information:

  • Length: 463
  • Mass: 50317
  • Checksum: 1E1651728AF3B5CD
  • Sequence:
  • MAASMFYGRL VAVATLRNHR PRTAQRAAAQ VLGSSGLFNN HGLQVQQQQQ RNLSLHEYMS 
    MELLQEAGVS VPKGYVAKSP DEAYAIAKKL GSKDVVIKAQ VLAGGRGKGT FESGLKGGVK 
    IVFSPEEAKA VSSQMIGKKL FTKQTGEKGR ICNQVLVCER KYPRREYYFA ITMERSFQGP 
    VLIGSSHGGV NIEDVAAESP EAIIKEPIDI EEGIKKEQAL QLAQKMGFPP NIVESAAENM 
    VKLYSLFLKY DATMIEINPM VEDSDGAVLC MDAKINFDSN SAYRQKKIFD LQDWTQEDER 
    DKDAAKANLN YIGLDGNIGC LVNGAGLAMA TMDIIKLHGG TPANFLDVGG GATVHQVTEA 
    FKLITSDKKV LAILVNIFGG IMRCDVIAQG IVMAVKDLEI KIPVVVRLQG TRVDDAKALI 
    ADSGLKILAC DDLDEAARMV VKLSEIVTLA KQAHVDVKFQ LPI

Genular Protein ID: 362273711

Symbol: Q9Y4T0_HUMAN

Name: N/A

UniProtKB Accession Codes:

Database IDs:

Sequence Information:

  • Length: 211
  • Mass: 22769
  • Checksum: 4407582532EB5BF7
  • Sequence:
  • TMIEINPMVE DSDGAVLCMD AKINFDSNSA YRQKKIFDLQ DWTQEDERDK DAAKANLNYI 
    GLDGNIGCLV NGAGLAMATM DIIKLHGGTP ANFLDVGGGA TVHQVTEAFK LITSDKKVLA 
    ILVNIFGGIM RCDVIAQGIV MAVKDLEIKI PVVVRLQGTR VDDAKALIAD SGLKILACDD 
    LDEAARMVVK LSEIVTLAKQ AHVDVKFQLP I