Details for: HDLBP

Gene ID: 3069

Symbol: HDLBP

Ensembl ID: ENSG00000115677

Description: high density lipoprotein binding protein

Associated with

Cells (max top 100)

(Marker Score score is uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)

  • Cell Name: acinar cell of salivary gland (CL0002623)
    Fold Change: 3.37
    Marker Score: 7677
  • Cell Name: IgG plasmablast (CL0000982)
    Fold Change: 2.96
    Marker Score: 816
  • Cell Name: acinar cell (CL0000622)
    Fold Change: 2.92
    Marker Score: 2058
  • Cell Name: fibroblast of mammary gland (CL0002555)
    Fold Change: 2.55
    Marker Score: 86679
  • Cell Name: IgA plasmablast (CL0000984)
    Fold Change: 2.54
    Marker Score: 667
  • Cell Name: basal cell of epithelium of trachea (CL1000348)
    Fold Change: 2.52
    Marker Score: 18765
  • Cell Name: nasal mucosa goblet cell (CL0002480)
    Fold Change: 2.49
    Marker Score: 1666
  • Cell Name: cell in vitro (CL0001034)
    Fold Change: 2.42
    Marker Score: 83736
  • Cell Name: bronchial goblet cell (CL1000312)
    Fold Change: 2.38
    Marker Score: 1175
  • Cell Name: bronchus fibroblast of lung (CL2000093)
    Fold Change: 2.34
    Marker Score: 3221
  • Cell Name: hepatoblast (CL0005026)
    Fold Change: 2.34
    Marker Score: 7662
  • Cell Name: pancreatic acinar cell (CL0002064)
    Fold Change: 2.33
    Marker Score: 4915
  • Cell Name: cortical cell of adrenal gland (CL0002097)
    Fold Change: 2.31
    Marker Score: 40962
  • Cell Name: duct epithelial cell (CL0000068)
    Fold Change: 2.3
    Marker Score: 1075
  • Cell Name: interstitial cell of ovary (CL0002094)
    Fold Change: 2.27
    Marker Score: 14796
  • Cell Name: stromal cell of ovary (CL0002132)
    Fold Change: 2.26
    Marker Score: 25499
  • Cell Name: ciliated columnar cell of tracheobronchial tree (CL0002145)
    Fold Change: 2.26
    Marker Score: 19621
  • Cell Name: conjunctival epithelial cell (CL1000432)
    Fold Change: 2.25
    Marker Score: 2372
  • Cell Name: luminal cell of prostate epithelium (CL0002340)
    Fold Change: 2.24
    Marker Score: 1303
  • Cell Name: mucous neck cell (CL0000651)
    Fold Change: 2.23
    Marker Score: 5065
  • Cell Name: skeletal muscle satellite stem cell (CL0008011)
    Fold Change: 2.2
    Marker Score: 2346
  • Cell Name: peptic cell (CL0000155)
    Fold Change: 2.13
    Marker Score: 891
  • Cell Name: luminal epithelial cell of mammary gland (CL0002326)
    Fold Change: 2.13
    Marker Score: 3771
  • Cell Name: foveolar cell of stomach (CL0002179)
    Fold Change: 2.13
    Marker Score: 13576
  • Cell Name: fibroblast of breast (CL4006000)
    Fold Change: 2.12
    Marker Score: 1212
  • Cell Name: ciliated cell (CL0000064)
    Fold Change: 2.1
    Marker Score: 7219
  • Cell Name: bladder urothelial cell (CL1001428)
    Fold Change: 2.1
    Marker Score: 3090
  • Cell Name: secretory cell (CL0000151)
    Fold Change: 2.08
    Marker Score: 3805
  • Cell Name: intestine goblet cell (CL0019031)
    Fold Change: 2.04
    Marker Score: 1951
  • Cell Name: pneumocyte (CL0000322)
    Fold Change: 2.03
    Marker Score: 3270.5
  • Cell Name: basal cell (CL0000646)
    Fold Change: 2.03
    Marker Score: 2614
  • Cell Name: myeloid leukocyte (CL0000766)
    Fold Change: 2.01
    Marker Score: 2432
  • Cell Name: paneth cell (CL0000510)
    Fold Change: 1.99
    Marker Score: 1387
  • Cell Name: oogonial cell (CL0000024)
    Fold Change: 1.98
    Marker Score: 2848
  • Cell Name: stromal cell (CL0000499)
    Fold Change: 1.97
    Marker Score: 2307.5
  • Cell Name: IgA plasma cell (CL0000987)
    Fold Change: 1.95
    Marker Score: 1663
  • Cell Name: fibroblast of connective tissue of nonglandular part of prostate (CL1000304)
    Fold Change: 1.94
    Marker Score: 1650.5
  • Cell Name: decidual cell (CL2000002)
    Fold Change: 1.9
    Marker Score: 8205.5
  • Cell Name: oocyte (CL0000023)
    Fold Change: 1.9
    Marker Score: 470
  • Cell Name: glandular cell of esophagus (CL0002657)
    Fold Change: 1.9
    Marker Score: 602
  • Cell Name: respiratory goblet cell (CL0002370)
    Fold Change: 1.9
    Marker Score: 548
  • Cell Name: basal cell of prostate epithelium (CL0002341)
    Fold Change: 1.9
    Marker Score: 4628.5
  • Cell Name: fibroblast of lung (CL0002553)
    Fold Change: 1.88
    Marker Score: 4927
  • Cell Name: kidney loop of Henle thick ascending limb epithelial cell (CL1001106)
    Fold Change: 1.87
    Marker Score: 5014
  • Cell Name: Leydig cell (CL0000178)
    Fold Change: 1.87
    Marker Score: 2016
  • Cell Name: elicited macrophage (CL0000861)
    Fold Change: 1.87
    Marker Score: 11340
  • Cell Name: plasmablast (CL0000980)
    Fold Change: 1.86
    Marker Score: 2476
  • Cell Name: taste receptor cell (CL0000209)
    Fold Change: 1.86
    Marker Score: 1608
  • Cell Name: preosteoblast (CL0007010)
    Fold Change: 1.85
    Marker Score: 523
  • Cell Name: ovarian surface epithelial cell (CL2000064)
    Fold Change: 1.84
    Marker Score: 5009
  • Cell Name: lung goblet cell (CL1000143)
    Fold Change: 1.84
    Marker Score: 530
  • Cell Name: ciliary muscle cell (CL1000443)
    Fold Change: 1.83
    Marker Score: 4017.5
  • Cell Name: placental villous trophoblast (CL2000060)
    Fold Change: 1.82
    Marker Score: 7168
  • Cell Name: squamous epithelial cell (CL0000076)
    Fold Change: 1.82
    Marker Score: 1242
  • Cell Name: endocrine cell (CL0000163)
    Fold Change: 1.82
    Marker Score: 942
  • Cell Name: type II pneumocyte (CL0002063)
    Fold Change: 1.82
    Marker Score: 11856
  • Cell Name: endocardial cell (CL0002350)
    Fold Change: 1.82
    Marker Score: 1026
  • Cell Name: epithelial cell (CL0000066)
    Fold Change: 1.81
    Marker Score: 2875
  • Cell Name: granulosa cell (CL0000501)
    Fold Change: 1.8
    Marker Score: 18160
  • Cell Name: stratified epithelial cell (CL0000079)
    Fold Change: 1.8
    Marker Score: 14065
  • Cell Name: myofibroblast cell (CL0000186)
    Fold Change: 1.79
    Marker Score: 2215
  • Cell Name: fibroblast of connective tissue of glandular part of prostate (CL1000305)
    Fold Change: 1.79
    Marker Score: 745
  • Cell Name: colon epithelial cell (CL0011108)
    Fold Change: 1.79
    Marker Score: 5617
  • Cell Name: cortical thymic epithelial cell (CL0002364)
    Fold Change: 1.78
    Marker Score: 6606
  • Cell Name: Unknown (CL0002371)
    Fold Change: 1.77
    Marker Score: 1876
  • Cell Name: adventitial cell (CL0002503)
    Fold Change: 1.77
    Marker Score: 436
  • Cell Name: mesodermal cell (CL0000222)
    Fold Change: 1.76
    Marker Score: 23235
  • Cell Name: enterocyte (CL0000584)
    Fold Change: 1.76
    Marker Score: 8450
  • Cell Name: epithelial cell of lung (CL0000082)
    Fold Change: 1.76
    Marker Score: 9247
  • Cell Name: multi-ciliated epithelial cell (CL0005012)
    Fold Change: 1.75
    Marker Score: 3323
  • Cell Name: kidney interstitial fibroblast (CL1000692)
    Fold Change: 1.74
    Marker Score: 3347
  • Cell Name: myoepithelial cell of mammary gland (CL0002324)
    Fold Change: 1.73
    Marker Score: 8504
  • Cell Name: keratinocyte (CL0000312)
    Fold Change: 1.73
    Marker Score: 1442
  • Cell Name: type A enteroendocrine cell (CL0002067)
    Fold Change: 1.7
    Marker Score: 687
  • Cell Name: hepatocyte (CL0000182)
    Fold Change: 1.7
    Marker Score: 1161
  • Cell Name: primordial germ cell (CL0000670)
    Fold Change: 1.7
    Marker Score: 2129
  • Cell Name: stem cell (CL0000034)
    Fold Change: 1.7
    Marker Score: 4031
  • Cell Name: kidney loop of Henle thin descending limb epithelial cell (CL1001111)
    Fold Change: 1.69
    Marker Score: 1824
  • Cell Name: respiratory epithelial cell (CL0002368)
    Fold Change: 1.69
    Marker Score: 929
  • Cell Name: epithelial cell of lower respiratory tract (CL0002632)
    Fold Change: 1.68
    Marker Score: 7007.5
  • Cell Name: corneal epithelial cell (CL0000575)
    Fold Change: 1.67
    Marker Score: 1849.5
  • Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
    Fold Change: 1.67
    Marker Score: 6439
  • Cell Name: epithelial cell of urethra (CL1000296)
    Fold Change: 1.67
    Marker Score: 1313
  • Cell Name: medullary thymic epithelial cell (CL0002365)
    Fold Change: 1.66
    Marker Score: 2730
  • Cell Name: mesothelial cell of epicardium (CL0011019)
    Fold Change: 1.65
    Marker Score: 531
  • Cell Name: eukaryotic cell (CL0000255)
    Fold Change: 1.65
    Marker Score: 849
  • Cell Name: lactocyte (CL0002325)
    Fold Change: 1.65
    Marker Score: 26460
  • Cell Name: kidney collecting duct principal cell (CL1001431)
    Fold Change: 1.65
    Marker Score: 4151
  • Cell Name: pancreatic stellate cell (CL0002410)
    Fold Change: 1.64
    Marker Score: 1035
  • Cell Name: choroid plexus epithelial cell (CL0000706)
    Fold Change: 1.64
    Marker Score: 1505
  • Cell Name: club cell (CL0000158)
    Fold Change: 1.62
    Marker Score: 1895
  • Cell Name: lung ciliated cell (CL1000271)
    Fold Change: 1.62
    Marker Score: 770
  • Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
    Fold Change: 1.62
    Marker Score: 1834
  • Cell Name: supporting cell (CL0000630)
    Fold Change: 1.61
    Marker Score: 3026
  • Cell Name: kidney epithelial cell (CL0002518)
    Fold Change: 1.61
    Marker Score: 1703
  • Cell Name: enteric smooth muscle cell (CL0002504)
    Fold Change: 1.61
    Marker Score: 3788
  • Cell Name: intestinal crypt stem cell (CL0002250)
    Fold Change: 1.61
    Marker Score: 605
  • Cell Name: epithelial cell of proximal tubule (CL0002306)
    Fold Change: 1.61
    Marker Score: 5708
  • Cell Name: male germ cell (CL0000015)
    Fold Change: 1.6
    Marker Score: 461
  • Cell Name: erythroblast (CL0000765)
    Fold Change: 1.6
    Marker Score: 997.5

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Other Information

**Key characteristics** * HDLBP is a glycoprotein with a molecular weight of approximately 120 kDa. * It is encoded by the HDLBP gene. * HDLBP is expressed in high levels in the plasma of individuals with high serum cholesterol. * HDLBP is a key protein in the reverse cholesterol transport (RCT) pathway. * It is a chaperone protein that helps to protect other proteins involved in the RCT pathway from degradation. **Pathways and functions** * HDLBP is a key protein in the reverse cholesterol transport (RCT) pathway. * The RCT pathway is a complex network of proteins that is responsible for removing cholesterol from peripheral tissues and transporting it to the liver for excretion. * HDLBP is a key component of the RCT pathway. * It helps to transport cholesterol from peripheral tissues to the liver in a cholesterol-rich lipoprotein called high-density lipoprotein (HDL). * HDLBP also helps to protect other proteins involved in the RCT pathway from degradation. **Clinical significance** * HDLBP is a major risk factor for atherosclerosis. * High levels of HDLBP are associated with an increased risk of heart disease, stroke, and other cardiovascular diseases. * HDLBP can be removed from the blood by high-density lipoprotein receptor (HDL) and its ligand, apolipoprotein B. * HDLBP can also be removed from the blood by the liver through the bile. * HDLBP levels can be measured in the blood. * Elevated HDLBP levels can be measured in individuals with high cholesterol and risk factors for atherosclerosis. * HDLBP can be used as a biomarker for cardiovascular disease. **Conclusion** HDLBP is a key protein in the reverse cholesterol transport (RCT) pathway, which is responsible for removing cholesterol from peripheral tissues and transporting it to the liver for excretion. High levels of HDLBP are associated with an increased risk of heart disease, stroke, and other cardiovascular diseases.

Genular Protein ID: 4066973418

Symbol: VIGLN_HUMAN

Name: Vigilin

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 1318310

Title: Cloning and expression of a cellular high density lipoprotein-binding protein that is up-regulated by cholesterol loading of cells.

PubMed ID: 1318310

DOI: 10.1016/s0021-9258(19)49815-3

PubMed ID: 14702039

Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.

PubMed ID: 14702039

DOI: 10.1038/ng1285

PubMed ID: 15815621

Title: Generation and annotation of the DNA sequences of human chromosomes 2 and 4.

PubMed ID: 15815621

DOI: 10.1038/nature03466

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 8605996

Title: Vigilin contains a functional nuclear localisation sequence and is present in both the cytoplasm and the nucleus.

PubMed ID: 8605996

DOI: 10.1016/0014-5793(96)00204-9

PubMed ID: 15592455

Title: Immunoaffinity profiling of tyrosine phosphorylation in cancer cells.

PubMed ID: 15592455

DOI: 10.1038/nbt1046

PubMed ID: 18669648

Title: A quantitative atlas of mitotic phosphorylation.

PubMed ID: 18669648

DOI: 10.1073/pnas.0805139105

PubMed ID: 19413330

Title: Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach.

PubMed ID: 19413330

DOI: 10.1021/ac9004309

PubMed ID: 19369195

Title: Large-scale proteomics analysis of the human kinome.

PubMed ID: 19369195

DOI: 10.1074/mcp.m800588-mcp200

PubMed ID: 19690332

Title: Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions.

PubMed ID: 19690332

DOI: 10.1126/scisignal.2000007

PubMed ID: 20068231

Title: Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.

PubMed ID: 20068231

DOI: 10.1126/scisignal.2000475

PubMed ID: 21406692

Title: System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation.

PubMed ID: 21406692

DOI: 10.1126/scisignal.2001570

PubMed ID: 22223895

Title: Comparative large-scale characterisation of plant vs. mammal proteins reveals similar and idiosyncratic N-alpha acetylation features.

PubMed ID: 22223895

DOI: 10.1074/mcp.m111.015131

PubMed ID: 23186163

Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.

PubMed ID: 23186163

DOI: 10.1021/pr300630k

PubMed ID: 24275569

Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.

PubMed ID: 24275569

DOI: 10.1016/j.jprot.2013.11.014

PubMed ID: 25944712

Title: N-terminome analysis of the human mitochondrial proteome.

PubMed ID: 25944712

DOI: 10.1002/pmic.201400617

PubMed ID: 16959974

Title: The consensus coding sequences of human breast and colorectal cancers.

PubMed ID: 16959974

DOI: 10.1126/science.1133427

PubMed ID: 21269460

Title: Initial characterization of the human central proteome.

PubMed ID: 21269460

DOI: 10.1186/1752-0509-5-17

Sequence Information:

  • Length: 1268
  • Mass: 141440
  • Checksum: 374ECB83D13A7431
  • Sequence:
  • MSSVAVLTQE SFAEHRSGLV PQQIKVATLN SEEESDPPTY KDAFPPLPEK AACLESAQEP 
    AGAWGNKIRP IKASVITQVF HVPLEERKYK DMNQFGEGEQ AKICLEIMQR TGAHLELSLA 
    KDQGLSIMVS GKLDAVMKAR KDIVARLQTQ ASATVAIPKE HHRFVIGKNG EKLQDLELKT 
    ATKIQIPRPD DPSNQIKITG TKEGIEKARH EVLLISAEQD KRAVERLEVE KAFHPFIAGP 
    YNRLVGEIMQ ETGTRINIPP PSVNRTEIVF TGEKEQLAQA VARIKKIYEE KKKKTTTIAV 
    EVKKSQHKYV IGPKGNSLQE ILERTGVSVE IPPSDSISET VILRGEPEKL GQALTEVYAK 
    ANSFTVSSVA APSWLHRFII GKKGQNLAKI TQQMPKVHIE FTEGEDKITL EGPTEDVNVA 
    QEQIEGMVKD LINRMDYVEI NIDHKFHRHL IGKSGANINR IKDQYKVSVR IPPDSEKSNL 
    IRIEGDPQGV QQAKRELLEL ASRMENERTK DLIIEQRFHR TIIGQKGERI REIRDKFPEV 
    IINFPDPAQK SDIVQLRGPK NEVEKCTKYM QKMVADLVEN SYSISVPIFK QFHKNIIGKG 
    GANIKKIREE SNTKIDLPAE NSNSETIIIT GKRANCEAAR SRILSIQKDL ANIAEVEVSI 
    PAKLHNSLIG TKGRLIRSIM EECGGVHIHF PVEGSGSDTV VIRGPSSDVE KAKKQLLHLA 
    EEKQTKSFTV DIRAKPEYHK FLIGKGGGKI RKVRDSTGAR VIFPAAEDKD QDLITIIGKE 
    DAVREAQKEL EALIQNLDNV VEDSMLVDPK HHRHFVIRRG QVLREIAEEY GGVMVSFPRS 
    GTQSDKVTLK GAKDCVEAAK KRIQEIIEDL EAQVTLECAI PQKFHRSVMG PKGSRIQQIT 
    RDFSVQIKFP DREENAVHST EPVVQENGDE AGEGREAKDC DPGSPRRCDI IIISGRKEKC 
    EAAKEALEAL VPVTIEVEVP FDLHRYVIGQ KGSGIRKMMD EFEVNIHVPA PELQSDIIAI 
    TGLAANLDRA KAGLLERVKE LQAEQEDRAL RSFKLSVTVD PKYHPKIIGR KGAVITQIRL 
    EHDVNIQFPD KDDGNQPQDQ ITITGYEKNT EAARDAILRI VGELEQMVSE DVPLDHRVHA 
    RIIGARGKAI RKIMDEFKVD IRFPQSGAPD PNCVTVTGLP ENVEEAIDHI LNLEEEYLAD 
    VVDSEALQVY MKPPAHEEAK APSRGFVVRD APWTASSSEK APDMSSSEEF PSFGAQVAPK 
    TLPWGPKR

Genular Protein ID: 1363129200

Symbol: B2R5V9_HUMAN

Name: N/A

UniProtKB Accession Codes:

Database IDs:

Sequence Information:

  • Length: 1268
  • Mass: 141380
  • Checksum: 39E470386A81CE3C
  • Sequence:
  • MSSVAVLTQE SFAEHRSGLV PQQIKVATLN SEEESDPPTY KDAFPPLPEK AACLESAQEP 
    AGAWGNKIRP IKASVITQVF HVPLEERKYK DMNQFGEGEQ AKICLEIMQR TGAHLELSLA 
    KDQGLSIMVS GKLDAVMKAR KDIVARLQTQ ASATVAIPKE HHRFVIGKNG EKLQDLELKT 
    ATKIQIPRPD DPSNQIKITG TKEGIEKARH EVLLISAEQD KRAVERLEVE KAFHPFIAGP 
    YNRLVGEIMQ ETGTRINIPP PSVNRTEIVS TGEKEQLAQA VARIKKIYEE KKKKTTTIAV 
    EVKKSQHKYV IGPKGNSLQE ILERTGVSVE IPPSDSISET VILRGEPEKL GQALTEVYAK 
    ANSFTVSSVA APSWLHRFII GKKGQNLAKI TQQMPKVHIE FTEGEDKITL EGPTEDVNVA 
    QEQIEGMVKD LINRMDYVEI NIDHKFHRHL IGKSGANINR IKDQYKVSVR IPPDSEKSNL 
    IRIEGDPQGV QQAKRELLEL ASRMENERTK DLIIEQRFHR TIIGQKGERI REIRDKFPEV 
    IINFPDPAQK SDIVQLRGPK NEVEKCTKYM QKMVADLVEN SYSISVPIFK QFHKNIIGKG 
    GANIKKIREE SNTKIDLPAE NSNSETIIIT GKRANCEAAR SRILSIQKDL ANIAEVEVSI 
    PAKLHNSLIG TKGRLIRSIM EECGGVHIHF PVEGSGSDTV VIRGPSSDVE KAKKQLLHLA 
    EEKQTKSFTV DIRAKPEYHK FLIGKGGGKI RKVRDSTGAR VIFPAAEDKD QDLITIIGKE 
    DAVREAQKEL EALIQNLDNV VEDSMLVDPK HHRHFVIRRG QVLREIAEEY GGVMVSFPRS 
    GTQSDKVTLK GAKDCVEAAK KRIQEIIEDL EAQVTLECAI PQKFHRSVMG PKGSRIQQIT 
    RDFSVQIKFP DREENAVHST EPVVQENGDE AGEGREAKDC DPGSPRRCDI IIISGRKEKC 
    EAAKEALEAL VPVTIEVEVP FDLHRYVIGQ KGSGIRKMMD EFEVNIHVPA PELQSDIIAI 
    TGLAANLDRA KAGLLERVKE LQAEQEDRAL RSFKLSVTVD PKYHPKIIGR KGAVITQIRL 
    EHDVNIQFPD KDDGNQPQDQ ITITGYEKNT EAARDAILRI VGELEQMVSE DVPLDHRVHA 
    RIIGARGKAI RKIMDEFKVD IRFPQSGAPD PNCVTVTGLP ENVEEAIDHI LNLEEEYLAD 
    VVDSEALQVY MKPPAHEEAK APSRGFVVRD APWTASSSEK APDMSSSEEF PSFGAQVAPK 
    TLPWGPKR

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. For the full schema, download it here.