Details for: LEF1
Associated with
Significant Cells
Cell Significance Index (CSI) scores for the chosen context(s)
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CSI 39.58rCSI 26.66%PRS 93.16
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CSI 35.79rCSI 36.48%PRS 90.63
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CSI 29.7rCSI 20.86%PRS 93.32
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CSI 27.95rCSI 48.34%PRS 73.95
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CSI 24.2rCSI 30.41%PRS 94.24
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CSI 19.14rCSI 15.13%PRS 71.36
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CSI 18.18rCSI 10.73%PRS 94.93
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CSI 16.52rCSI 13.68%PRS 84.07
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CSI 14.43rCSI 18.45%PRS 90.28
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CSI 12.03rCSI 27.3%PRS 82.19
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CSI 11.57rCSI 11.37%PRS 93.46
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CSI 11.48rCSI 8.5%PRS 75.75
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CSI 10.94rCSI 7.61%PRS 92.23
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CSI 7.53rCSI 9.67%PRS 78.08
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CSI 7.43rCSI 26.4%PRS 96.68
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CSI 7.39rCSI 12.95%PRS 76.22
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CSI 7.24rCSI 5.04%PRS 93.84
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CSI 7.06rCSI 25.55%PRS 94.96
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CSI 7.05rCSI 6.18%PRS 88.49
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CSI 6.91rCSI 7.98%PRS 74.2
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CSI 6.45rCSI 4.88%PRS 92.73
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CSI 6.31rCSI 5.05%PRS 93.1
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CSI 6.04rCSI 13.3%PRS 85.46
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CSI 5.85rCSI 4.45%PRS 93.14
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CSI 5.7rCSI 6.53%PRS 91.06
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CSI 5.56rCSI 5.14%PRS 94.41
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CSI 5.28rCSI 7.34%PRS 80.38
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CSI 5.07rCSI 4.88%PRS 81.34
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CSI 4.85rCSI 12.32%PRS 75.64
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CSI 4.85rCSI 6.48%PRS 87.4
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CSI 4.8rCSI 3.44%PRS 93.12
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CSI 4.58rCSI 3.56%PRS 93.68
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CSI 4.55rCSI 17.69%PRS 94.62
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CSI 4.36rCSI 3.26%PRS 93.07
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CSI 4.21rCSI 19.12%PRS 95.12
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CSI 4.09rCSI 29.19%PRS 79.55
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CSI 4.04rCSI 6.6%PRS 49.09
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CSI 3.85rCSI 6.13%PRS 75.29
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CSI 3.79rCSI 3.33%PRS 71.44
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CSI 3.68rCSI 7.63%PRS 78.83
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CSI 3.67rCSI 4.3%PRS 93.56
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CSI 3.52rCSI 4.08%PRS 81.35
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CSI 3.47rCSI 6.15%PRS 51.02
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CSI 3.29rCSI 2.99%PRS 92.31
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CSI 3.12rCSI 2.74%PRS 86.7
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CSI 3.11rCSI 2.47%PRS 95.93
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CSI 2.89rCSI 4.73%PRS 71.77
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CSI 2.86rCSI 3.89%PRS 95.55
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CSI 2.83rCSI 4.52%PRS 85.45
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CSI 2.71rCSI 7.15%PRS 88.04
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CSI 2.58rCSI 6.89%PRS 74.1
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CSI 2.45rCSI 13.37%PRS 78.38
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CSI 2.32rCSI 2.09%PRS 80.12
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CSI 2.28rCSI 2.2%PRS 93.33
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CSI 2.25rCSI 4.34%PRS 96
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CSI 2.06rCSI 1.55%PRS 87.38
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CSI 2rCSI 5.75%PRS 95.77
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CSI 1.96rCSI 5.6%PRS 86.43
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CSI 1.88rCSI 2.88%PRS 88.45
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CSI 1.78rCSI 3.56%PRS 92.16
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CSI 1.69rCSI 17.45%PRS 75.63
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CSI 1.59rCSI 6.23%PRS 60.73
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CSI 1.58rCSI 3.81%PRS 96.37
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CSI 1.57rCSI 3.93%PRS 93.48
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CSI 1.43rCSI 1.71%PRS 94.69
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CSI 1.37rCSI 2.82%PRS 78.43
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CSI 1.28rCSI 4.02%PRS 68.48
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CSI 1.18rCSI 2.13%PRS 94.6
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CSI 1.06rCSI 1.28%PRS 62.59
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CSI 0.98rCSI 18.67%PRS 94.9
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CSI 0.98rCSI 7.16%PRS 89.28
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CSI 0.9rCSI 1.27%PRS 80.39
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CSI 0.66rCSI 5.33%PRS 76.61
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CSI 0.6rCSI 0.82%PRS 49.07
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CSI 0.4rCSI 2.17%PRS 95.66
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Network Configuration
Explore relationships of the current gene. Select an Interaction Source: 'ONTOLOGY' for shared pathways (GO/Reactome) or 'STRING' for protein-protein interactions. Further refine by selecting context genes and comparing Cell Significance Index (CSI) scores between baseline and target cell types and their specific contexts.
Legend:
- Query Gene
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Node Color (Target Cell CSI, relative to current network):
- Very High
- High
- Medium
- Low
- Very Low
- CSI N/A
- Node Size: Proportional to Target Cell CSI magnitude
- STRING PPI Edge
- Shared Pathway Edge (ONTOLOGY)
Other Information
This section provides additional information about the gene, including a description generated by an AI language model and details about associated proteins.
Genular Protein ID: 91882950
Symbol: LEF1_HUMAN
Name: T cell-specific transcription factor 1-alpha
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 2010090
Title: A thymus-specific member of the HMG protein family regulates the human T cell receptor C alpha enhancer.
PubMed ID: 2010090
DOI: 10.1101/gad.5.4.656
PubMed ID: 10756202
Title: The human LEF-1 gene contains a promoter preferentially active in lymphocytes and encodes multiple isoforms derived from alternative splicing.
PubMed ID: 10756202
PubMed ID: 19653274
Title: Lef-1 isoforms regulate different target genes and reduce cellular adhesion.
PubMed ID: 19653274
DOI: 10.1002/ijc.24802
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 15815621
Title: Generation and annotation of the DNA sequences of human chromosomes 2 and 4.
PubMed ID: 15815621
DOI: 10.1038/nature03466
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 9119228
Title: ALY, a context-dependent coactivator of LEF-1 and AML-1, is required for TCRalpha enhancer function.
PubMed ID: 9119228
DOI: 10.1101/gad.11.5.640
PubMed ID: 9488439
Title: Two members of the Tcf family implicated in Wnt/b-catenin signaling during embryogenesis in the mouse.
PubMed ID: 9488439
PubMed ID: 9751710
Title: Transcriptional repression by AML1 and LEF-1 is mediated by the TLE/Groucho corepressors.
PubMed ID: 9751710
PubMed ID: 11326276
Title: Beta-catenin-sensitive isoforms of lymphoid enhancer factor-1 are selectively expressed in colon cancer.
PubMed ID: 11326276
DOI: 10.1038/ng0501-53
PubMed ID: 11266540
Title: All Tcf HMG box transcription factors interact with Groucho-related co-repressors.
PubMed ID: 11266540
PubMed ID: 12192039
Title: I-mfa domain proteins interact with Axin and affect its regulation of the Wnt and c-Jun N-terminal kinase signaling pathways.
PubMed ID: 12192039
PubMed ID: 12556497
Title: Regulation of lymphoid enhancer factor 1/T-cell factor by mitogen-activated protein kinase-related Nemo-like kinase-dependent phosphorylation in Wnt/beta-catenin signaling.
PubMed ID: 12556497
PubMed ID: 14759258
PubMed ID: 19304756
Title: Dazap2 modulates transcription driven by the Wnt effector TCF-4.
PubMed ID: 19304756
DOI: 10.1093/nar/gkp179
PubMed ID: 19690332
Title: Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions.
PubMed ID: 19690332
PubMed ID: 16959974
Title: The consensus coding sequences of human breast and colorectal cancers.
PubMed ID: 16959974
Sequence Information:
- Length: 399
- Mass: 44201
- Checksum: D480D440698EEFE3
- Sequence:
MPQLSGGGGG GGGDPELCAT DEMIPFKDEG DPQKEKIFAE ISHPEEEGDL ADIKSSLVNE SEIIPASNGH EVARQAQTSQ EPYHDKAREH PDDGKHPDGG LYNKGPSYSS YSGYIMMPNM NNDPYMSNGS LSPPIPRTSN KVPVVQPSHA VHPLTPLITY SDEHFSPGSH PSHIPSDVNS KQGMSRHPPA PDIPTFYPLS PGGVGQITPP LGWQGQPVYP ITGGFRQPYP SSLSVDTSMS RFSHHMIPGP PGPHTTGIPH PAIVTPQVKQ EHPHTDSDLM HVKPQHEQRK EQEPKRPHIK KPLNAFMLYM KEMRANVVAE CTLKESAAIN QILGRRWHAL SREEQAKYYE LARKERQLHM QLYPGWSARD NYGKKKKRKR EKLQESASGT GPRMTAAYI
Genular Protein ID: 257884789
Symbol: Q659G9_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Sequence Information:
- Length: 69
- Mass: 8251
- Checksum: CBF29BD0C3287867
- Sequence:
QILGRRWHAL SREEQAKYYE LARKERQLHM QLYPGWSARD NYGKKKKRKR EKLQESASGT GPRMTAAYI