Details for: PSMB5

Gene ID: 5693

Gene Type:  Protein-coding  - A gene that serves as a template for producing a messenger RNA (mRNA) molecule, which is then translated into a functional protein.

Symbol: PSMB5

Ensembl ID: ENSG00000100804

Description: proteasome 20S subunit beta 5

Selected Context(s):  Overall

Cell Significance Landscape

Contexts:

Associated with

Significant Cells

Cell Significance Index (CSI) scores for the chosen context(s)

  • fallopian tube secretory epithelial cell CL4030006
    CSI 57.73
    rCSI 55.58%
    PRS 14.01
  • ciliated epithelial cell CL0000067
    CSI 55.18
    rCSI 48.53%
    PRS 9.8
  • peripheral nervous system neuron CL2000032
    CSI 51.51
    rCSI 70.18%
    PRS 12.07
  • intestinal epithelial cell CL0002563
    CSI 49.91
    rCSI 52.16%
    PRS 14.21
  • megakaryocyte-erythroid progenitor cell CL0000050
    CSI 49.61
    rCSI 44.8%
    PRS 11.96
  • keratinocyte CL0000312
    CSI 47.05
    rCSI 39.44%
    PRS 16.18
  • stem cell CL0000034
    CSI 43.92
    rCSI 42.35%
    PRS 9.4
  • pancreatic D cell CL0000173
    CSI 41.8
    rCSI 41.11%
    PRS 14.72
  • pancreatic A cell CL0000171
    CSI 41.16
    rCSI 43.12%
    PRS 14.46
  • multi-ciliated epithelial cell CL0005012
    CSI 40.07
    rCSI 39.99%
    PRS 11.54
  • extravillous trophoblast CL0008036
    CSI 39.05
    rCSI 48.3%
    PRS 11.87
  • placental villous trophoblast CL2000060
    CSI 38.28
    rCSI 59.15%
    PRS 12.66
  • colon epithelial cell CL0011108
    CSI 36.28
    rCSI 38%
    PRS 12.6
  • enteric smooth muscle cell CL0002504
    CSI 35.49
    rCSI 50.65%
    PRS 15.25
  • common myeloid progenitor CL0000049
    CSI 33.87
    rCSI 27.39%
    PRS 13.36
  • mesodermal cell CL0000222
    CSI 32.46
    rCSI 38.96%
    PRS 13.35
  • paneth cell CL0000510
    CSI 30.06
    rCSI 44.37%
    PRS 21.27
  • neural crest cell CL0011012
    CSI 29.18
    rCSI 23.07%
    PRS 9.29
  • enteroendocrine cell CL0000164
    CSI 28.45
    rCSI 38.87%
    PRS 14.99
  • transit amplifying cell of colon CL0009011
    CSI 26.57
    rCSI 31.2%
    PRS 15.89
  • common dendritic progenitor CL0001029
    CSI 24.23
    rCSI 30.41%
    PRS 17.23
  • granulocyte monocyte progenitor cell CL0000557
    CSI 23.01
    rCSI 19.93%
    PRS 15.06
  • lung ciliated cell CL1000271
    CSI 21.99
    rCSI 25.43%
    PRS 9.89
  • mucous neck cell CL0000651
    CSI 21.46
    rCSI 30.93%
    PRS 21.69
  • epithelial cell of lung CL0000082
    CSI 20.82
    rCSI 17.26%
    PRS 12.74
  • type B pancreatic cell CL0000169
    CSI 20.75
    rCSI 45.94%
    PRS 12.58
  • promyelocyte CL0000836
    CSI 20.19
    rCSI 29.12%
    PRS 18.78
  • pancreatic acinar cell CL0002064
    CSI 20.1
    rCSI 26.71%
    PRS 14.78
  • respiratory suprabasal cell CL4033048
    CSI 19.98
    rCSI 25.62%
    PRS 15.62
  • deuterosomal cell CL4033044
    CSI 19.62
    rCSI 66.31%
    PRS 22.56
  • bronchus fibroblast of lung CL2000093
    CSI 19.25
    rCSI 15.64%
    PRS 14.27
  • forebrain radial glial cell CL0013000
    CSI 19.16
    rCSI 61.49%
    PRS 19.76
  • muscle cell CL0000187
    CSI 18.83
    rCSI 38.67%
    PRS 31.06
  • microcirculation associated smooth muscle cell CL0008035
    CSI 18.66
    rCSI 54.03%
    PRS 15.34
  • myofibroblast cell CL0000186
    CSI 17.3
    rCSI 23.96%
    PRS 19.42
  • hematopoietic stem cell CL0000037
    CSI 16.76
    rCSI 11.14%
    PRS 16.12
  • retina horizontal cell CL0000745
    CSI 16.55
    rCSI 25.22%
    PRS 12.65
  • mammary gland epithelial cell CL0002327
    CSI 16.48
    rCSI 57.82%
    PRS 24.37
  • kidney epithelial cell CL0002518
    CSI 16.21
    rCSI 30.94%
    PRS 31.4
  • epithelial cell CL0000066
    CSI 15.51
    rCSI 23.83%
    PRS 19.18
  • ciliated columnar cell of tracheobronchial tree CL0002145
    CSI 14.42
    rCSI 32.87%
    PRS 14.09
  • type L enteroendocrine cell CL0002279
    CSI 13.6
    rCSI 25.52%
    PRS 26.64
  • CD4-positive, alpha-beta thymocyte CL0000810
    CSI 13.27
    rCSI 10.63%
    PRS 24.51
  • fraction A pre-pro B cell CL0002045
    CSI 12.8
    rCSI 14.66%
    PRS 27.66
  • ionocyte CL0005006
    CSI 12.21
    rCSI 13.09%
    PRS 12.45
  • early lymphoid progenitor CL0000936
    CSI 12.1
    rCSI 10.63%
    PRS 15.2
  • retinal pigment epithelial cell CL0002586
    CSI 12.1
    rCSI 24.03%
    PRS 14.4
  • pro-B cell CL0000826
    CSI 11.91
    rCSI 9.86%
    PRS 13.51
  • intestine goblet cell CL0019031
    CSI 11.84
    rCSI 10.51%
    PRS 13.53
  • interstitial cell of Cajal CL0002088
    CSI 11.74
    rCSI 14.95%
    PRS 15.71
  • ciliated cell CL0000064
    CSI 11.71
    rCSI 18.97%
    PRS 13.77
  • secretory cell CL0000151
    CSI 11.46
    rCSI 11.95%
    PRS 13.85
  • goblet cell CL0000160
    CSI 11.41
    rCSI 10.79%
    PRS 14.12
  • pancreatic stellate cell CL0002410
    CSI 11.26
    rCSI 65.54%
    PRS 20.3
  • primitive red blood cell CL0002355
    CSI 11.05
    rCSI 59.65%
    PRS 25.18
  • transit amplifying cell CL0009010
    CSI 11.05
    rCSI 16.9%
    PRS 21.95
  • lung secretory cell CL1000272
    CSI 11.02
    rCSI 27.27%
    PRS 12.49
  • melanocyte CL0000148
    CSI 10.99
    rCSI 8.14%
    PRS 11.98
  • neuroblast (sensu Vertebrata) CL0000031
    CSI 10.64
    rCSI 13.66%
    PRS 13.16
  • cerebral cortex GABAergic interneuron CL0010011
    CSI 10.6
    rCSI 31.28%
    PRS 16.53
  • pancreatic PP cell CL0002275
    CSI 10.31
    rCSI 41.04%
    PRS 23.78
  • syncytiotrophoblast cell CL0000525
    CSI 10.3
    rCSI 29.66%
    PRS 26.15
  • Cajal-Retzius cell CL0000695
    CSI 10.29
    rCSI 80.66%
    PRS 29.01
  • mucus secreting cell CL0000319
    CSI 10.22
    rCSI 16.22%
    PRS 17.47
  • respiratory hillock cell CL4030023
    CSI 9.91
    rCSI 17.68%
    PRS 22.89
  • fibroblast of lung CL0002553
    CSI 9.67
    rCSI 9%
    PRS 13.54
  • radial glial cell CL0000681
    CSI 9.5
    rCSI 13.19%
    PRS 13.92
  • acinar cell CL0000622
    CSI 9.5
    rCSI 13.92%
    PRS 17.75
  • activated CD4-positive, alpha-beta T cell CL0000896
    CSI 9.43
    rCSI 8.72%
    PRS 24.62
  • midzonal region hepatocyte CL0019028
    CSI 9.32
    rCSI 21.88%
    PRS 20.25
  • tracheal goblet cell CL1000329
    CSI 9.11
    rCSI 19.9%
    PRS 27.11
  • bronchial goblet cell CL1000312
    CSI 9.08
    rCSI 36.28%
    PRS 29.49
  • pancreatic ductal cell CL0002079
    CSI 8.84
    rCSI 17.18%
    PRS 13.81
  • Mueller cell CL0000636
    CSI 8.74
    rCSI 19.95%
    PRS 11.85
  • intermediate monocyte CL0002393
    CSI 8.73
    rCSI 13.18%
    PRS 13.36
  • endothelial cell of artery CL1000413
    CSI 8.61
    rCSI 12.61%
    PRS 58.55
  • duct epithelial cell CL0000068
    CSI 8.56
    rCSI 12.52%
    PRS 14.29
  • luminal epithelial cell of mammary gland CL0002326
    CSI 8.49
    rCSI 15.43%
    PRS 20.69
  • unswitched memory B cell CL0000970
    CSI 8.03
    rCSI 6.76%
    PRS 21.74
  • nasal mucosa goblet cell CL0002480
    CSI 8.03
    rCSI 9.31%
    PRS 19.98
  • interneuron CL0000099
    CSI 8.01
    rCSI 16.09%
    PRS 10.02
  • retinal ganglion cell CL0000740
    CSI 7.99
    rCSI 17.66%
    PRS 9.75
  • vascular associated smooth muscle cell CL0000359
    CSI 7.91
    rCSI 25.66%
    PRS 16.51
  • M cell of gut CL0000682
    CSI 7.9
    rCSI 8.39%
    PRS 23.89
  • Schwann cell CL0002573
    CSI 7.58
    rCSI 21.55%
    PRS 16.04
  • foveolar cell of stomach CL0002179
    CSI 7.51
    rCSI 15.98%
    PRS 21.77
  • erythroid lineage cell CL0000764
    CSI 7.5
    rCSI 48.27%
    PRS 31.42
  • hematopoietic precursor cell CL0008001
    CSI 7.33
    rCSI 7.54%
    PRS 22.1
  • erythrocyte CL0000232
    CSI 7.28
    rCSI 16.51%
    PRS 18.77
  • type EC enteroendocrine cell CL0000577
    CSI 7.27
    rCSI 25.82%
    PRS 22.11
  • elicited macrophage CL0000861
    CSI 7.25
    rCSI 6.65%
    PRS 15.5
  • enterocyte CL0000584
    CSI 7.19
    rCSI 11.59%
    PRS 21.55
  • promonocyte CL0000559
    CSI 7.06
    rCSI 12.09%
    PRS 18.13
  • pulmonary capillary endothelial cell CL4028001
    CSI 7.03
    rCSI 13.4%
    PRS 21.58
  • neuroblast (sensu Nematoda and Protostomia) CL0000338
    CSI 6.9
    rCSI 7.97%
    PRS 11.87
  • mesenchymal cell CL0008019
    CSI 6.82
    rCSI 17.31%
    PRS 13.72
  • glutamatergic neuron CL0000679
    CSI 6.79
    rCSI 13.95%
    PRS 13.74
  • rod bipolar cell CL0000751
    CSI 6.69
    rCSI 12.02%
    PRS 11.3
  • P/D1 enteroendocrine cell CL0002268
    CSI 6.59
    rCSI 35.86%
    PRS 33.17
  • plasmablast CL0000980
    CSI 6.54
    rCSI 5.15%
    PRS 16.07
  • regular ventricular cardiac myocyte CL0002131
    CSI -2.7
    rCSI -16.8%
    PRS 10.6%
  • L6b glutamatergic cortical neuron CL4023038
    CSI -2.4
    rCSI -7.6%
    PRS 8.5%
  • L5 extratelencephalic projecting glutamatergic cortical neuron CL4023041
    CSI -1.9
    rCSI -6.9%
    PRS 7.4%
  • corticothalamic-projecting glutamatergic cortical neuron CL4023013
    CSI -1.9
    rCSI -11.2%
    PRS 8.3%
  • effector CD4-positive, alpha-beta T cell CL0001044
    CSI -1.7
    rCSI -5.0%
    PRS 19.7%
  • thymocyte CL0000893
    CSI -0.9
    rCSI -3.1%
    PRS 41.8%
  • renal beta-intercalated cell CL0002201
    CSI -0.4
    rCSI -1.0%
    PRS 16.0%
  • megakaryocyte progenitor cell CL0000553
    CSI 0.2
    rCSI 2.9%
    PRS 38.6%
  • macroglial cell CL0000126
    CSI 0.2
    rCSI 0.5%
    PRS 18.8%
  • parietal cell CL0000162
    CSI 0.3
    rCSI 2.4%
    PRS 62.3%
  • lung microvascular endothelial cell CL2000016
    CSI 0.4
    rCSI 7.1%
    PRS 41.5%
  • luminal cell of prostate epithelium CL0002340
    CSI 0.5
    rCSI 2.4%
    PRS 24.3%
  • myelocyte CL0002193
    CSI 0.5
    rCSI 2.9%
    PRS 42.4%
  • kidney loop of Henle epithelial cell CL1000909
    CSI 0.5
    rCSI 10.8%
    PRS 72.6%
  • Merkel cell CL0000242
    CSI 0.5
    rCSI 12.1%
    PRS 73.5%
  • near-projecting glutamatergic cortical neuron CL4023012
    CSI 0.5
    rCSI 2.1%
    PRS 8.1%
  • caudal ganglionic eminence derived cortical interneuron CL4023064
    CSI 0.6
    rCSI 1.0%
    PRS 7.9%
  • enterocyte of epithelium of small intestine CL1000334
    CSI 0.7
    rCSI 10.3%
    PRS 33.4%
  • common lymphoid progenitor CL0000051
    CSI 0.7
    rCSI 0.9%
    PRS 25.8%
  • sncg GABAergic cortical interneuron CL4023015
    CSI 0.7
    rCSI 1.1%
    PRS 8.7%
  • T follicular helper cell CL0002038
    CSI 0.8
    rCSI 0.6%
    PRS 21.9%
  • intestinal crypt stem cell of small intestine CL0009017
    CSI 0.9
    rCSI 2.4%
    PRS 17.4%
  • peptic cell CL0000155
    CSI 0.9
    rCSI 8.9%
    PRS 39.1%
  • uterine smooth muscle cell CL0002601
    CSI 0.9
    rCSI 6.1%
    PRS 65.9%
  • vasa recta descending limb cell CL1001285
    CSI 1.0
    rCSI 8.0%
    PRS 52.0%
  • OFF-bipolar cell CL0000750
    CSI 1.0
    rCSI 1.4%
    PRS 22.0%
  • blood vessel smooth muscle cell CL0019018
    CSI 1.0
    rCSI 8.3%
    PRS 13.9%
  • periportal region hepatocyte CL0019026
    CSI 1.1
    rCSI 4.1%
    PRS 18.8%
  • CD8-alpha-alpha-positive, alpha-beta intraepithelial T cell CL0000915
    CSI 1.1
    rCSI 4.8%
    PRS 46.1%
  • mature alpha-beta T cell CL0000791
    CSI 1.1
    rCSI 4.0%
    PRS 23.2%
  • CD8-positive, alpha-beta thymocyte CL0000811
    CSI 1.1
    rCSI 1.7%
    PRS 32.4%
  • intestinal tuft cell CL0019032
    CSI 1.1
    rCSI 1.7%
    PRS 15.5%
  • Hofbauer cell CL3000001
    CSI 1.1
    rCSI 2.1%
    PRS 16.8%
  • CD4-positive helper T cell CL0000492
    CSI 1.2
    rCSI 0.9%
    PRS 18.7%
  • acinar cell of salivary gland CL0002623
    CSI 1.2
    rCSI 27.8%
    PRS 24.4%
  • germinal center B cell CL0000844
    CSI 1.2
    rCSI 3.6%
    PRS 33.1%
  • ventricular cardiac muscle cell CL2000046
    CSI 1.3
    rCSI 4.4%
    PRS 50.7%
  • small intestine goblet cell CL1000495
    CSI 1.3
    rCSI 2.9%
    PRS 18.0%
  • epithelial cell of urethra CL1000296
    CSI 1.3
    rCSI 33.7%
    PRS 42.1%
  • IgG plasma cell CL0000985
    CSI 1.3
    rCSI 1.6%
    PRS 23.2%
  • paneth cell of colon CL0009009
    CSI 1.4
    rCSI 13.2%
    PRS 37.8%
  • myoepithelial cell CL0000185
    CSI 1.4
    rCSI 3.5%
    PRS 16.8%
  • L2/3-6 intratelencephalic projecting glutamatergic neuron CL4023040
    CSI 1.4
    rCSI 3.5%
    PRS 7.8%
  • kidney loop of Henle thin descending limb epithelial cell CL1001111
    CSI 1.5
    rCSI 2.2%
    PRS 12.6%
  • T-helper 17 cell CL0000899
    CSI 1.6
    rCSI 1.3%
    PRS 23.9%
  • hair follicular keratinocyte CL2000092
    CSI 1.6
    rCSI 28.5%
    PRS 51.4%
  • basal cell of epithelium of trachea CL1000348
    CSI 1.7
    rCSI 11.8%
    PRS 40.7%
  • CD8-positive, CD28-negative, alpha-beta regulatory T cell CL0000920
    CSI 1.7
    rCSI 3.5%
    PRS 22.5%
  • neuroplacodal cell CL0000032
    CSI 1.9
    rCSI 17.4%
    PRS 38.3%
  • bronchiolar smooth muscle cell CL4033017
    CSI 1.9
    rCSI 28.8%
    PRS 41.5%
  • mesenchymal lymphangioblast CL0005021
    CSI 2.0
    rCSI 52.0%
    PRS 57.2%
  • stromal cell of ovary CL0002132
    CSI 2.0
    rCSI 5.6%
    PRS 22.3%
  • tracheobronchial smooth muscle cell CL0019019
    CSI 2.0
    rCSI 3.6%
    PRS 17.9%
  • retinal blood vessel endothelial cell CL0002585
    CSI 2.1
    rCSI 3.3%
    PRS 14.8%
  • tracheobronchial serous cell CL0019001
    CSI 2.1
    rCSI 9.0%
    PRS 25.7%
  • vasa recta ascending limb cell CL1001131
    CSI 2.1
    rCSI 9.5%
    PRS 46.9%
  • retinal cone cell CL0000573
    CSI 2.1
    rCSI 3.4%
    PRS 10.4%
  • lung endothelial cell CL1001567
    CSI 2.2
    rCSI 5.1%
    PRS 32.0%
  • hepatocyte CL0000182
    CSI 2.2
    rCSI 4.0%
    PRS 12.6%
  • lymphoid lineage restricted progenitor cell CL0000838
    CSI 2.2
    rCSI 8.7%
    PRS 22.1%
  • chandelier pvalb GABAergic cortical interneuron CL4023036
    CSI 2.3
    rCSI 7.2%
    PRS 9.1%
  • prostate gland microvascular endothelial cell CL2000059
    CSI 2.4
    rCSI 57.5%
    PRS 44.7%
  • hematopoietic multipotent progenitor cell CL0000837
    CSI 2.4
    rCSI 5.8%
    PRS 21.4%
  • centrilobular region hepatocyte CL0019029
    CSI 2.5
    rCSI 6.4%
    PRS 21.3%
  • mesenchymal stem cell of adipose tissue CL0002570
    CSI 2.5
    rCSI 13.8%
    PRS 37.7%
  • colonocyte CL1000347
    CSI 2.6
    rCSI 3.7%
    PRS 18.6%
  • keratocyte CL0002363
    CSI 2.6
    rCSI 6.2%
    PRS 20.2%
  • astrocyte of the cerebral cortex CL0002605
    CSI 2.6
    rCSI 5.8%
    PRS 8.3%
  • paneth cell of epithelium of small intestine CL1000343
    CSI 2.6
    rCSI 7.3%
    PRS 20.9%
  • neural progenitor cell CL0011020
    CSI 2.6
    rCSI 11.5%
    PRS 13.1%
  • retinal bipolar neuron CL0000748
    CSI 2.6
    rCSI 4.9%
    PRS 9.8%
  • osteoblast CL0000062
    CSI 2.6
    rCSI 65.2%
    PRS 75.8%
  • eosinophil CL0000771
    CSI 2.7
    rCSI 17.7%
    PRS 34.7%
  • amacrine cell CL0000561
    CSI 2.7
    rCSI 7.9%
    PRS 10.5%
  • pluripotent stem cell CL0002248
    CSI 2.7
    rCSI 81.8%
    PRS 30.9%
  • pulmonary alveolar type 1 cell CL0002062
    CSI 2.7
    rCSI 15.8%
    PRS 17.8%
  • podocyte CL0000653
    CSI 2.8
    rCSI 12.2%
    PRS 13.3%
  • basal cell of prostate epithelium CL0002341
    CSI 2.8
    rCSI 8.1%
    PRS 30.0%
  • stromal cell CL0000499
    CSI 2.8
    rCSI 8.0%
    PRS 19.2%
  • alveolar macrophage CL0000583
    CSI 2.9
    rCSI 4.8%
    PRS 15.8%
  • enteroendocrine cell of small intestine CL0009006
    CSI 3.0
    rCSI 6.5%
    PRS 20.7%
  • kidney loop of Henle thin ascending limb epithelial cell CL1001107
    CSI 3.0
    rCSI 7.8%
    PRS 12.6%
  • glial cell CL0000125
    CSI 3.0
    rCSI 11.5%
    PRS 13.6%
  • myeloid lineage restricted progenitor cell CL0000839
    CSI 3.0
    rCSI 15.7%
    PRS 26.5%
  • primordial germ cell CL0000670
    CSI 3.0
    rCSI 15.2%
    PRS 65.2%
  • intrahepatic cholangiocyte CL0002538
    CSI 3.1
    rCSI 7.4%
    PRS 24.4%
  • regular atrial cardiac myocyte CL0002129
    CSI 3.1
    rCSI 10.0%
    PRS 14.4%
  • glioblast CL0000030
    CSI 3.1
    rCSI 5.0%
    PRS 11.6%
  • double negative thymocyte CL0002489
    CSI 3.2
    rCSI 2.2%
    PRS 15.9%
  • alveolar type 1 fibroblast cell CL4028004
    CSI 3.2
    rCSI 3.5%
    PRS 15.5%
  • retinal rod cell CL0000604
    CSI 3.2
    rCSI 5.6%
    PRS 13.4%
  • conjunctival epithelial cell CL1000432
    CSI 3.2
    rCSI 4.9%
    PRS 13.5%
  • lung macrophage CL1001603
    CSI 3.2
    rCSI 7.2%
    PRS 15.4%
  • megakaryocyte CL0000556
    CSI 3.2
    rCSI 14.0%
    PRS 24.2%
  • cell of skeletal muscle CL0000188
    CSI 3.3
    rCSI 35.4%
    PRS 62.5%
  • Bergmann glial cell CL0000644
    CSI 3.3
    rCSI 4.5%
    PRS 13.7%
  • endocrine cell CL0000163
    CSI 3.4
    rCSI 17.3%
    PRS 52.1%
  • lung pericyte CL0009089
    CSI 3.4
    rCSI 8.9%
    PRS 16.2%
  • basophil mast progenitor cell CL0002028
    CSI 3.4
    rCSI 18.1%
    PRS 48.1%
  • cerebral cortex endothelial cell CL1001602
    CSI 3.4
    rCSI 6.0%
    PRS 10.3%

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Network Configuration

Explore relationships of the current gene. Select an Interaction Source: 'ONTOLOGY' for shared pathways (GO/Reactome) or 'STRING' for protein-protein interactions. Further refine by selecting context genes and comparing Cell Significance Index (CSI) scores between baseline and target cell types and their specific contexts.

Comma-separated if multiple.
Comma-separated if multiple.

Legend:
  • Query Gene
  • Node Color (Target Cell CSI, relative to current network):
    • Very High
    • High
    • Medium
    • Low
    • Very Low
    • CSI N/A
  • Node Size: Proportional to Target Cell CSI magnitude
  • STRING PPI Edge
  • Shared Pathway Edge (ONTOLOGY)

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Other Information

This section provides additional information about the gene, including a description generated by an AI language model and details about associated proteins.

## Summary [PSMB5](/details-gene/5693) (Proteasome 20S Subunit Beta 5) is a protein-coding gene located on chromosome 14q11.2 that encodes a core catalytic subunit of the 20S proteasome complex. As an integral component of the ubiquitin-proteasome system, [PSMB5](/details-gene/5693) possesses threonine-type endopeptidase activity essential for the degradation of a wide variety of intracellular proteins. This function is critical for maintaining cellular homeostasis, regulating the cell cycle, and processing antigens for immune surveillance. Expression data indicates that [PSMB5](/details-gene/5693) is highly significant in metabolically active and proliferative cell populations, particularly diverse epithelial lineages and progenitor cells, suggesting a foundational role in cellular protein quality control and turnover. The gene is associated with OMIM entry [600306](https://omim.org/entry/600306). ## Cellular Roles and Expression Landscape The expression profile of [PSMB5](/details-gene/5693) highlights its role as a fundamental housekeeping gene, with particularly high significance in cells requiring high rates of protein turnover for specialized functions or proliferation. **Overall**, the gene shows the highest significance in various epithelial and progenitor cell types. Top cell types include [fallopian tube secretory epithelial cell](/details-cell/CL4030006) (CSI: 57.73), [ciliated epithelial cell](/details-cell/CL0000067) (CSI: 55.18), [intestinal epithelial cell](/details-cell/CL0002563) (CSI: 49.91), and [keratinocyte](/details-cell/CL0000312) (CSI: 47.05). Its prominence in hematopoietic progenitors, such as [megakaryocyte-erythroid progenitor cell](/details-cell/CL0000050) (CSI: 49.61) and [common myeloid progenitor](/details-cell/CL0000049) (CSI: 33.87), is consistent with a crucial role in cell division and differentiation. This pattern suggests that [PSMB5](/details-gene/5693) is indispensable for the maintenance of tissues with high cellular turnover and complex protein synthesis demands. Conversely, [PSMB5](/details-gene/5693) shows low to negative significance in terminally differentiated, long-lived cell types. These include [regular ventricular cardiac myocyte](/details-cell/CL0002131) (CSI: -2.69) and several subtypes of glutamatergic neurons, such as [L6b glutamatergic cortical neuron](/details-cell/CL4023038) (CSI: -2.43). This reduced significance in relatively static cellular populations reinforces the idea that its primary role is tied to dynamic cellular processes like proliferation, differentiation, and high-volume protein secretion, rather than baseline maintenance in quiescent cells. ## Pathways and Molecular Function [PSMB5](/details-gene/5693) is a core component of the [proteasome complex](/details-go/GO:0000502) and its function is central to protein degradation. Gene Ontology annotations confirm its involvement in [Proteasome-mediated ubiquitin-dependent protein catabolic process](/details-go/GO:0043161) and its intrinsic [Threonine-type endopeptidase activity](/details-go/GO:0004298). The gene's involvement is reflected across a vast landscape of Reactome pathways, underscoring the proteasome's role as a master regulator of cellular processes. Key functional themes include: * **Immune System Regulation:** [PSMB5](/details-gene/5693) is essential for the [Adaptive immune system](/details-reactome/R-HSA-1280218), particularly in [Class I MHC mediated antigen processing & presentation](/details-reactome/R-HSA-983169). By degrading intracellular proteins into peptides, it generates the antigenic fragments that are presented on the cell surface to cytotoxic T lymphocytes, a cornerstone of anti-viral and anti-tumor immunity. Studies have detailed the replacement of constitutive subunits like [PSMB5](/details-gene/5693) with inducible subunits (e.g., LMP7) upon interferon-gamma stimulation to alter peptidase activity for more efficient antigen processing ([Link](https://pubmed.ncbi.nlm.nih.gov/8163024/)). * **Cell Cycle Control:** The gene plays a pivotal role in the [Cell cycle](/details-reactome/R-HSA-1640170) by mediating the timely degradation of key regulatory proteins. This includes pathways such as [Apc/c-mediated degradation of cell cycle proteins](/details-reactome/R-HSA-174143) and [Scf(skp2)-mediated degradation of p27/p21](/details-reactome/R-HSA-187577), which are critical for controlling transitions between cell cycle phases (e.g., [G1/S transition](/details-reactome/R-HSA-69206)). * **Signal Transduction:** [PSMB5](/details-gene/5693) is a downstream effector that regulates numerous major signaling cascades by controlling the stability of key transcription factors and pathway components. This is evident in its connection to pathways like [Signaling by wnt](/details-reactome/R-HSA-195721) (via degradation of beta-catenin), [Signaling by hedgehog](/details-reactome/R-HSA-5358351) (via processing of Gli proteins), and NF-kappaB signaling pathways such as [Activation of nf-kappab in b cells](/details-reactome/R-HSA-1169091). ## Research Directions The ubiquitous and critical nature of [PSMB5](/details-gene/5693) makes it a central node in cellular physiology and pathology. Future research could explore its specific roles in different cellular contexts and its potential as a therapeutic target. ### Proposed Hypotheses: 1. **Tissue-Specific Proteostasis and Disease:** The high significance of [PSMB5](/details-gene/5693) in specialized secretory cells, like [fallopian tube secretory epithelial cell](/details-cell/CL4030006), suggests that these cells may have a heightened dependency on proteasome capacity to manage the protein folding load of their secretome. It is hypothesized that subtle reductions in [PSMB5](/details-gene/5693) expression or function could lead to proteotoxic stress and contribute to tissue-specific diseases, such as chronic obstructive pulmonary disease (in ciliated cells) or infertility (in fallopian tube cells), independent of systemic proteasome dysfunction. 2. **Oncogenic Dependency in Proliferative Cancers:** Given its essential role in cell cycle progression and high expression in progenitor populations, it is hypothesized that rapidly proliferating cancer cells, particularly carcinomas derived from the highly expressing epithelial tissues, exhibit a state of "proteasome addiction." This dependency makes them exquisitely sensitive to inhibition of [PSMB5](/details-gene/5693), presenting a therapeutic window compared to their quiescent, non-malignant counterparts. ### Experimental Approach: To test the hypothesis of oncogenic dependency (Hypothesis 2), a targeted genetic screening approach could be employed. * **Experiment:** Utilize CRISPR-Cas9 to systematically knock out [PSMB5](/details-gene/5693) in a panel of cancer cell lines derived from high-expressing tissues (e.g., colon carcinoma, ovarian carcinoma) and compare the effects to those in corresponding primary epithelial cells or terminally differentiated cell lines (e.g., primary neurons). The primary readouts would be cell viability (e.g., using a CellTiter-Glo assay) and apoptosis rates (e.g., via Annexin V staining and flow cytometry). A significantly greater reduction in viability and induction of apoptosis in the cancer cell lines following [PSMB5](/details-gene/5693) knockout would provide strong evidence for synthetic lethality and oncogenic dependency. ### Therapeutic Potential: [PSMB5](/details-gene/5693), as a core catalytic subunit of the proteasome, is a well-established and clinically validated therapeutic target. The primary therapeutic strategy is **inhibition**. Proteasome inhibitors (e.g., Bortezomib, Carfilzomib) are already standard-of-care for hematological malignancies like multiple myeloma. The broad expression of [PSMB5](/details-gene/5693) in healthy proliferative tissues, however, contributes to significant on-target toxicities, such as peripheral neuropathy and myelosuppression. Future opportunities lie in developing more specific inhibitors that can distinguish between the constitutive proteasome and the immunoproteasome or designing delivery systems (e.g., antibody-drug conjugates) to selectively target cancer cells, thereby widening the therapeutic window.

Genular Protein ID: 3409025733

Symbol: PSB5_HUMAN

Name: Macropain epsilon chain

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 8753855

Title: Divergent intron arrangement in the MB1/LMP7 proteasome gene pair.

PubMed ID: 8753855

DOI: 10.1007/bf02602554

PubMed ID: 14702039

Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.

PubMed ID: 14702039

DOI: 10.1038/ng1285

PubMed ID: 17974005

Title: The full-ORF clone resource of the German cDNA consortium.

PubMed ID: 17974005

DOI: 10.1186/1471-2164-8-399

PubMed ID: 12508121

Title: The DNA sequence and analysis of human chromosome 14.

PubMed ID: 12508121

DOI: 10.1038/nature01348

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 8066462

Title: cDNA cloning and interferon gamma down-regulation of proteasomal subunits X and Y.

PubMed ID: 8066462

DOI: 10.1126/science.8066462

PubMed ID: 7820546

Title: Proteasome components with reciprocal expression to that of the MHC-encoded LMP proteins.

PubMed ID: 7820546

DOI: 10.1016/s0960-9822(00)00174-3

PubMed ID: 2306472

Title: Relationships among the subunits of the high molecular weight proteinase, macropain (proteasome).

PubMed ID: 2306472

DOI: 10.1016/0167-4838(90)90165-c

PubMed ID: 7811265

Title: Human proteasome subunits from 2-dimensional gels identified by partial sequencing.

PubMed ID: 7811265

DOI: 10.1006/bbrc.1994.2876

PubMed ID: 8163024

Title: Replacement of proteasome subunits X and Y by LMP7 and LMP2 induced by interferon-gamma for acquirement of the functional diversity responsible for antigen processing.

PubMed ID: 8163024

DOI: 10.1016/0014-5793(94)80612-8

PubMed ID: 7864893

Title:

PubMed ID: 7864893

DOI: 10.1006/bbrc.1995.1294

PubMed ID: 8663318

Title: Proteasome subunits X and Y alter peptidase activities in opposite ways to the interferon-gamma-induced subunits LMP2 and LMP7.

PubMed ID: 8663318

DOI: 10.1074/jbc.271.29.17275

PubMed ID: 8610016

Title: A role for the proteasome regulator PA28alpha in antigen presentation.

PubMed ID: 8610016

DOI: 10.1038/381166a0

PubMed ID: 12181345

Title: Clastosome: a subtype of nuclear body enriched in 19S and 20S proteasomes, ubiquitin, and protein substrates of proteasome.

PubMed ID: 12181345

DOI: 10.1091/mbc.e02-03-0122

PubMed ID: 14550573

Title: Human immunodeficiency virus-1 Tat protein interacts with distinct proteasomal alpha and beta subunits.

PubMed ID: 14550573

DOI: 10.1016/s0014-5793(03)01025-1

PubMed ID: 15244466

Title: 20S proteasome prevents aggregation of heat-denatured proteins without PA700 regulatory subcomplex like a molecular chaperone.

PubMed ID: 15244466

DOI: 10.1021/bm049957a

PubMed ID: 15488952

Title: Cytoplasmic domains of the transporter associated with antigen processing and P-glycoprotein interact with subunits of the proteasome.

PubMed ID: 15488952

DOI: 10.1016/j.molimm.2004.07.005

PubMed ID: 15944226

Title: IFN-gamma-induced immune adaptation of the proteasome system is an accelerated and transient response.

PubMed ID: 15944226

DOI: 10.1073/pnas.0501711102

PubMed ID: 17323924

Title: Mass spectrometric characterization of the affinity-purified human 26S proteasome complex.

PubMed ID: 17323924

DOI: 10.1021/bi061994u

PubMed ID: 17004105

Title: Over-expression of genes and proteins of ubiquitin specific peptidases (USPs) and proteasome subunits (PSs) in breast cancer tissue observed by the methods of RFDD-PCR and proteomics.

PubMed ID: 17004105

DOI: 10.1007/s10549-006-9393-7

PubMed ID: 18565852

Title: Molecular basis of bortezomib resistance: proteasome subunit beta5 (PSMB5) gene mutation and overexpression of PSMB5 protein.

PubMed ID: 18565852

DOI: 10.1182/blood-2007-08-104950

PubMed ID: 18502982

Title: Point mutation of the proteasome beta5 subunit gene is an important mechanism of bortezomib resistance in bortezomib-selected variants of Jurkat T cell lymphoblastic lymphoma/leukemia line.

PubMed ID: 18502982

DOI: 10.1124/jpet.108.138131

PubMed ID: 19426847

Title: Different mutants of PSMB5 confer varying bortezomib resistance in T lymphoblastic lymphoma/leukemia cells derived from the Jurkat cell line.

PubMed ID: 19426847

DOI: 10.1016/j.exphem.2009.04.001

PubMed ID: 18602823

Title: Regulation of estrogen receptor alpha expression in human breast cancer cells by sulforaphane.

PubMed ID: 18602823

DOI: 10.1016/j.jnutbio.2008.02.002

PubMed ID: 21269460

Title: Initial characterization of the human central proteome.

PubMed ID: 21269460

DOI: 10.1186/1752-0509-5-17

PubMed ID: 23495936

Title: Molecular architecture and assembly of the eukaryotic proteasome.

PubMed ID: 23495936

DOI: 10.1146/annurev-biochem-060410-150257

PubMed ID: 24275569

Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.

PubMed ID: 24275569

DOI: 10.1016/j.jprot.2013.11.014

PubMed ID: 27176742

Title: Human 20S proteasome activity towards fluorogenic peptides of various chain lengths.

PubMed ID: 27176742

DOI: 10.1515/hsz-2016-0176

PubMed ID: 26133119

Title: Cryo-EM reveals the conformation of a substrate analogue in the human 20S proteasome core.

PubMed ID: 26133119

DOI: 10.1038/ncomms8573

PubMed ID: 25599644

Title: Crystal structure of the human 20S proteasome in complex with carfilzomib.

PubMed ID: 25599644

DOI: 10.1016/j.str.2014.11.017

PubMed ID: 27428775

Title: An atomic structure of the human 26S proteasome.

PubMed ID: 27428775

DOI: 10.1038/nsmb.3273

PubMed ID: 27342858

Title: Structure of the human 26S proteasome at a resolution of 3.9 Aa.

PubMed ID: 27342858

DOI: 10.1073/pnas.1608050113

PubMed ID: 27493187

Title: The inhibition mechanism of human 20S proteasomes enables next-generation inhibitor design.

PubMed ID: 27493187

DOI: 10.1126/science.aaf8993

PubMed ID: 34711951

Title: AKIRIN2 controls the nuclear import of proteasomes in vertebrates.

PubMed ID: 34711951

DOI: 10.1038/s41586-021-04035-8

Sequence Information:

  • Length: 263
  • Mass: 28480
  • Checksum: AED4A73DF41AA6EF
  • Sequence:
  • MALASVLERP LPVNQRGFFG LGGRADLLDL GPGSLSDGLS LAAPGWGVPE EPGIEMLHGT 
    TTLAFKFRHG VIVAADSRAT AGAYIASQTV KKVIEINPYL LGTMAGGAAD CSFWERLLAR 
    QCRIYELRNK ERISVAAASK LLANMVYQYK GMGLSMGTMI CGWDKRGPGL YYVDSEGNRI 
    SGATFSVGSG SVYAYGVMDR GYSYDLEVEQ AYDLARRAIY QATYRDAYSG GAVNLYHVRE 
    DGWIRVSSDN VADLHEKYSG STP

Genular Protein ID: 2893850597

Symbol: A0A140VJS7_HUMAN

Name: N/A

UniProtKB Accession Codes:

Database IDs:

Sequence Information:

  • Length: 160
  • Mass: 17782
  • Checksum: 47A97A3A9A849846
  • Sequence:
  • MAGGAADCSF WERLLARQCR IYELRNKERI SVAAASKLLA NMVYQYKGMG LSMGTMICGW 
    DKRGPGLYYV DSEGNRISGA TFSVGSGSVY AYGVMDRGYS YDLEVEQAYD LARRAIYQAT 
    YRDAYSGGAV NLYHVREDGW IRVSSDNVAD LHEKYSGSTP