Details for: RAP1GDS1
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: polychromatophilic erythroblast (CL0000550)
Fold Change: 329.2290
Cell Significance Index: -51.2100 - Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
Fold Change: 195.5896
Cell Significance Index: -49.6100 - Cell Name: embryonic stem cell (CL0002322)
Fold Change: 121.8116
Cell Significance Index: -50.1800 - Cell Name: smooth muscle fiber of ileum (CL1000278)
Fold Change: 112.2166
Cell Significance Index: -52.9800 - Cell Name: mucosal type mast cell (CL0000485)
Fold Change: 104.1459
Cell Significance Index: -42.3100 - Cell Name: peripheral blood mononuclear cell (CL2000001)
Fold Change: 94.3262
Cell Significance Index: -48.5200 - Cell Name: ileal goblet cell (CL1000326)
Fold Change: 79.2448
Cell Significance Index: -53.1800 - Cell Name: ciliated cell of the bronchus (CL0002332)
Fold Change: 44.7765
Cell Significance Index: -42.7500 - Cell Name: orthochromatic erythroblast (CL0000552)
Fold Change: 42.3373
Cell Significance Index: -52.2000 - Cell Name: CD8-alpha-beta-positive, alpha-beta intraepithelial T cell (CL0000796)
Fold Change: 18.2690
Cell Significance Index: -48.9400 - Cell Name: CD8-positive, alpha-beta regulatory T cell (CL0000795)
Fold Change: 15.7645
Cell Significance Index: -48.4200 - Cell Name: stromal cell of bone marrow (CL0010001)
Fold Change: 13.4362
Cell Significance Index: -53.0200 - Cell Name: epidermal Langerhans cell (CL0002457)
Fold Change: 12.8165
Cell Significance Index: -28.0500 - Cell Name: GABAergic amacrine cell (CL4030027)
Fold Change: 3.6378
Cell Significance Index: 45.1200 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: 2.6770
Cell Significance Index: 118.4100 - Cell Name: retinal rod cell (CL0000604)
Fold Change: 2.5666
Cell Significance Index: 30.6000 - Cell Name: direct pathway medium spiny neuron (CL4023026)
Fold Change: 2.5618
Cell Significance Index: 97.0100 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 2.2995
Cell Significance Index: 824.7900 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 2.2814
Cell Significance Index: 457.6400 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: 2.1713
Cell Significance Index: 121.8400 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 1.7881
Cell Significance Index: 290.8100 - Cell Name: microfold cell of epithelium of small intestine (CL1000353)
Fold Change: 1.7574
Cell Significance Index: 121.5400 - Cell Name: cerebellar granule cell (CL0001031)
Fold Change: 1.6126
Cell Significance Index: 27.6400 - Cell Name: hippocampal pyramidal neuron (CL1001571)
Fold Change: 1.5724
Cell Significance Index: 44.8700 - Cell Name: colon goblet cell (CL0009039)
Fold Change: 1.4654
Cell Significance Index: 144.9600 - Cell Name: enteroendocrine cell of small intestine (CL0009006)
Fold Change: 1.4214
Cell Significance Index: 35.5300 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: 1.4202
Cell Significance Index: 39.6900 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: 1.3762
Cell Significance Index: 86.7400 - Cell Name: GABAergic interneuron (CL0011005)
Fold Change: 1.3463
Cell Significance Index: 931.1700 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: 1.3367
Cell Significance Index: 102.5800 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 1.3283
Cell Significance Index: 263.6000 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: 1.2952
Cell Significance Index: 87.0900 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 1.2189
Cell Significance Index: 1100.5700 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: 1.2017
Cell Significance Index: 73.8600 - Cell Name: cortical interneuron (CL0008031)
Fold Change: 0.9265
Cell Significance Index: 22.2200 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 0.7957
Cell Significance Index: 86.5500 - Cell Name: gut absorptive cell (CL0000677)
Fold Change: 0.7607
Cell Significance Index: 45.6700 - Cell Name: leptomeningeal cell (CL0000708)
Fold Change: 0.6842
Cell Significance Index: 14.6300 - Cell Name: epithelial cell of stomach (CL0002178)
Fold Change: 0.6746
Cell Significance Index: 78.6200 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: 0.5538
Cell Significance Index: 99.8400 - Cell Name: skeletal muscle fiber (CL0008002)
Fold Change: 0.4898
Cell Significance Index: 12.5900 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: 0.4335
Cell Significance Index: 22.7600 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: 0.3636
Cell Significance Index: 44.7100 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: 0.2408
Cell Significance Index: 152.9100 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: 0.1671
Cell Significance Index: 314.5400 - Cell Name: cell in vitro (CL0001034)
Fold Change: 0.1485
Cell Significance Index: 81.0900 - Cell Name: early pro-B cell (CL0002046)
Fold Change: 0.1060
Cell Significance Index: 6.8400 - Cell Name: hair follicular keratinocyte (CL2000092)
Fold Change: 0.0941
Cell Significance Index: 41.6100 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: 0.0889
Cell Significance Index: 4.0300 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: 0.0793
Cell Significance Index: 107.8700 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: 0.0748
Cell Significance Index: 115.1600 - Cell Name: enteroendocrine cell of colon (CL0009042)
Fold Change: 0.0690
Cell Significance Index: 13.1200 - Cell Name: anterior lens cell (CL0002223)
Fold Change: 0.0492
Cell Significance Index: 90.8000 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: 0.0383
Cell Significance Index: 17.3700 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: 0.0185
Cell Significance Index: 2.5400 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: -0.0290
Cell Significance Index: -4.9500 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: -0.0429
Cell Significance Index: -6.2400 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: -0.0472
Cell Significance Index: -1.6600 - Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
Fold Change: -0.0480
Cell Significance Index: -35.1600 - Cell Name: tonsil germinal center B cell (CL2000006)
Fold Change: -0.0512
Cell Significance Index: -6.0400 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0526
Cell Significance Index: -38.9300 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: -0.0607
Cell Significance Index: -45.9700 - Cell Name: midget ganglion cell of retina (CL4023188)
Fold Change: -0.0638
Cell Significance Index: -0.6600 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: -0.0806
Cell Significance Index: -1.1000 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0812
Cell Significance Index: -45.8000 - Cell Name: pancreatic PP cell (CL0002275)
Fold Change: -0.0926
Cell Significance Index: -57.8400 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.1366
Cell Significance Index: -13.9500 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.1545
Cell Significance Index: -44.4500 - Cell Name: Purkinje cell (CL0000121)
Fold Change: -0.1977
Cell Significance Index: -4.3300 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: -0.2191
Cell Significance Index: -16.3300 - Cell Name: lactocyte (CL0002325)
Fold Change: -0.2372
Cell Significance Index: -30.6400 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: -0.2390
Cell Significance Index: -11.2400 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: -0.2605
Cell Significance Index: -13.5300 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.2698
Cell Significance Index: -56.8300 - Cell Name: endothelial cell of placenta (CL0009092)
Fold Change: -0.2988
Cell Significance Index: -1.8100 - Cell Name: odontoblast (CL0000060)
Fold Change: -0.2996
Cell Significance Index: -38.4100 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.3437
Cell Significance Index: -39.3800 - Cell Name: lung endothelial cell (CL1001567)
Fold Change: -0.3500
Cell Significance Index: -18.2300 - Cell Name: sst GABAergic cortical interneuron (CL4023017)
Fold Change: -0.3570
Cell Significance Index: -7.0600 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: -0.3633
Cell Significance Index: -37.8300 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: -0.3803
Cell Significance Index: -17.7300 - Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
Fold Change: -0.4376
Cell Significance Index: -9.3200 - Cell Name: cardiac endothelial cell (CL0010008)
Fold Change: -0.4443
Cell Significance Index: -6.3900 - Cell Name: OFF midget ganglion cell (CL4033047)
Fold Change: -0.4459
Cell Significance Index: -5.5600 - Cell Name: preadipocyte (CL0002334)
Fold Change: -0.4596
Cell Significance Index: -8.9700 - Cell Name: CD4-positive, alpha-beta memory T cell, CD45RO-positive (CL0001204)
Fold Change: -0.5021
Cell Significance Index: -14.7500 - Cell Name: sebum secreting cell (CL0000317)
Fold Change: -0.5092
Cell Significance Index: -36.0100 - Cell Name: cardiac muscle cell (CL0000746)
Fold Change: -0.5409
Cell Significance Index: -7.9900 - Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
Fold Change: -0.5582
Cell Significance Index: -44.2100 - Cell Name: transit amplifying cell of colon (CL0009011)
Fold Change: -0.5790
Cell Significance Index: -18.5500 - Cell Name: hippocampal interneuron (CL1001569)
Fold Change: -0.5922
Cell Significance Index: -7.6800 - Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
Fold Change: -0.6248
Cell Significance Index: -13.2600 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
Fold Change: -0.6475
Cell Significance Index: -21.2000 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: -0.6625
Cell Significance Index: -21.1000 - Cell Name: transit amplifying cell of small intestine (CL0009012)
Fold Change: -0.6643
Cell Significance Index: -13.7800 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: -0.7340
Cell Significance Index: -19.6000 - Cell Name: ON midget ganglion cell (CL4033046)
Fold Change: -0.7646
Cell Significance Index: -9.6500 - Cell Name: medial ganglionic eminence derived interneuron (CL4023063)
Fold Change: -0.7943
Cell Significance Index: -11.3800 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: -0.8500
Cell Significance Index: -52.1100 - Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
Fold Change: -0.8956
Cell Significance Index: -31.1200
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 421824256
Symbol: GDS1_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 1549351
Title: Molecular cloning of the human cDNA for a stimulatory GDP/GTP exchange protein for c-Ki-ras p21 and smg p21.
PubMed ID: 1549351
PubMed ID: 11948427
Title: SmgGDS displays differential binding and exchange activity towards different Ras isoforms.
PubMed ID: 11948427
PubMed ID: 15815621
Title: Generation and annotation of the DNA sequences of human chromosomes 2 and 4.
PubMed ID: 15815621
DOI: 10.1038/nature03466
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 19608861
Title: Lysine acetylation targets protein complexes and co-regulates major cellular functions.
PubMed ID: 19608861
PubMed ID: 21269460
Title: Initial characterization of the human central proteome.
PubMed ID: 21269460
PubMed ID: 31406347
Title: Mutations in RABL3 alter KRAS prenylation and are associated with hereditary pancreatic cancer.
PubMed ID: 31406347
PubMed ID: 10477737
Title: The (4;11)(q21;p15) translocation fuses the NUP98 and RAP1GDS1 genes and is recurrent in T-cell acute lymphocytic leukemia.
PubMed ID: 10477737
PubMed ID: 10929031
Title: t(4;11)(q21;p15) translocation involving NUP98 and RAP1GDS1 genes: characterization of a new subset of T acute lymphoblastic leukaemia.
PubMed ID: 10929031
PubMed ID: 12551911
Title: Novel mechanism of the co-regulation of nuclear transport of SmgGDS and Rac1.
PubMed ID: 12551911
PubMed ID: 20709748
Title: Splice variants of SmgGDS control small GTPase prenylation and membrane localization.
PubMed ID: 20709748
PubMed ID: 21242305
Title: SmgGDS is a guanine nucleotide exchange factor that specifically activates RhoA and RhoC.
PubMed ID: 21242305
PubMed ID: 16419055
Title: Identification of NUP98 abnormalities in acute leukemia: JARID1A (12p13) as a new partner gene.
PubMed ID: 16419055
DOI: 10.1002/gcc.20308
PubMed ID: 24349085
Title: Transglutaminase 2 contributes to apoptosis induction in Jurkat T cells by modulating Ca2+ homeostasis via cross-linking RAP1GDS1.
PubMed ID: 24349085
PubMed ID: 24415755
Title: The chaperone protein SmgGDS interacts with small GTPases entering the prenylation pathway by recognizing the last amino acid in the CAAX motif.
PubMed ID: 24415755
PubMed ID: 27716788
Title: Vimar Is a Novel Regulator of Mitochondrial Fission through Miro.
PubMed ID: 27716788
PubMed ID: 32431071
Title: Mutated RAP1GDS1 causes a new syndrome of dysmorphic feature, intellectual disability & speech delay.
PubMed ID: 32431071
DOI: 10.1002/acn3.51059
PubMed ID: 33875846
Title: Combining exome/genome sequencing with data repository analysis reveals novel gene-disease associations for a wide range of genetic disorders.
PubMed ID: 33875846
PubMed ID: 28630045
Title: Structure-based analysis of the guanine nucleotide exchange factor SmgGDS reveals armadillo-repeat motifs and key regions for activity and GTPase binding.
PubMed ID: 28630045
PubMed ID: 30190425
Title: GEF mechanism revealed by the structure of SmgGDS-558 and farnesylated RhoA complex and its implication for a chaperone mechanism.
PubMed ID: 30190425
Sequence Information:
- Length: 607
- Mass: 66317
- Checksum: ED0F359DFA3F0510
- Sequence:
MDNLSDTLKK LKITAVDKTE DSLEGCLDCL LQALAQNNTE TSEKIQASGI LQLFASLLTP QSSCKAKVAN IIAEVAKNEF MRIPCVDAGL ISPLVQLLNS KDQEVLLQTG RALGNICYDS HEGRSAVDQA GGAQIVIDHL RSLCSITDPA NEKLLTVFCG MLMNYSNEND SLQAQLINMG VIPTLVKLLG IHCQNAALTE MCLVAFGNLA ELESSKEQFA STNIAEELVK LFKKQIEHDK REMIFEVLAP LAENDAIKLQ LVEAGLVECL LEIVQQKVDS DKEDDITELK TGSDLMVLLL LGDESMQKLF EGGKGSVFQR VLSWIPSNNH QLQLAGALAI ANFARNDANC IHMVDNGIVE KLMDLLDRHV EDGNVTVQHA ALSALRNLAI PVINKAKMLS AGVTEAVLKF LKSEMPPVQF KLLGTLRMLI DAQAEAAEQL GKNVKLVERL VEWCEAKDHA GVMGESNRLL SALIRHSKSK DVIKTIVQSG GIKHLVTMAT SEHVIMQNEA LVALALIAAL ELGTAEKDLE SAKLVQILHR LLADERSAPE IKYNSMVLIC ALMGSECLHK EVQDLAFLDV VSKLRSHENK SVAQQASLTE QRLTVES
Genular Protein ID: 454128086
Symbol: Q6U7G8_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Sequence Information:
- Length: 516
- Mass: 56488
- Checksum: 6945502F7D3F895E
- Sequence:
MADNLSDTLK KLKITADDKT EDSLEGCLDC LLQALAQNNT ETSEKIQASG ILQLFSSLLT PQSSCKAKVA NIIAEVAKNE FMRIPCVDAG LISPLVQLLN SKDQEVLLQT GRALGNICYD SQSSKEQFAS TNIAEELVKL FKKQIEHDKR EMTFEVLAPL AENDAIKLQL VEAGLVECLL EIVQQKVDSD KEDDITELKT GSDLMVLLLL GDESMQKLFE GGKGSVFQRV LSWIPSNNHQ LQLAGALATA NFARNDANCI HMVDNGIVEK LMDLLDRHVE DGNVTVQHAA LSALRNLAIP VINKAKMLSA GVTEAVLKFL KSEMPPVQFK LLGTLRMLID AQAEAAEQLG KNVKLVERLV EWCEAKDHAG VMGESNRLLS ALIRHSKSKD VIKTIAQSGG IKHLVTMATS EHVIMQSEAL VALALIAALE LGTAEKDLES AKLVQILHRL LADERSAPEI KYNSMVLICA LMGSECLHKE VQDLAFLDVV SKLRSHENKS VAQQASLTEQ RLTVES
Genular Protein ID: 3945820482
Symbol: B3KNU0_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
Sequence Information:
- Length: 607
- Mass: 66379
- Checksum: 56BBA97534B5546B
- Sequence:
MDNLSDTLKK LKITAVDKTE DSLEGCLDCL LQALAQNNTE TSEKIQASGI LQLFASLLTP QSSCKVKVAN IIAEVAKNEF MRIPCVDAGL ISPLVQLLNS KDQEVLLQTG RALGNICYDS HEGRSAVDQA GGAQIVIDHL RSLCSITDPA NEKLLTVFCG MLMNYSNEND SLQAQLINMG VIPTLVKLLG IHCQNAALTE MCLVAFGNLA ELESSKEQFA STNIAEELVK LFKKQIEHDK REMIFEVLAP LAENDAIKLQ LVEAGLVECL LEIVQQKVDS DKEDDITELK TGSDLMVLLL LGDESMQKLF EGGKGSVFQR VLSWIPSNNH QLQLAGALAI ANFARNDANC IHMVDNGIVE KLMDLLDRHV EDGNVTVQHA ALSAFRNLAI PVINKAKMLS AGVTEAVLKF LKSEMPPVQF KLLGTLRMLI DAQAEAAEQL GKNVKLVERL VEWCEAKDHA GVMGESNRLL SALIRHSKSK DVIKTIVQSG GIKHLVTMAT SEHVIMQNEA LVALALIAAL ELGTAEKDLE SAKLVQILHR LLADERSAPE IKYNSMVLIC ALMGSECLHK EVQDLAFLDV VSKLRSHENK SVAQQASLTE QRLTVES
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.