Details for: SMARCE1
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: polychromatophilic erythroblast (CL0000550)
Fold Change: 206.3066
Cell Significance Index: -32.0900 - Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
Fold Change: 133.2185
Cell Significance Index: -33.7900 - Cell Name: embryonic stem cell (CL0002322)
Fold Change: 99.4058
Cell Significance Index: -40.9500 - Cell Name: smooth muscle fiber of ileum (CL1000278)
Fold Change: 90.2467
Cell Significance Index: -42.6100 - Cell Name: mucosal type mast cell (CL0000485)
Fold Change: 89.5923
Cell Significance Index: -36.4000 - Cell Name: peripheral blood mononuclear cell (CL2000001)
Fold Change: 81.2037
Cell Significance Index: -41.7700 - Cell Name: ciliated cell of the bronchus (CL0002332)
Fold Change: 38.6701
Cell Significance Index: -36.9200 - Cell Name: orthochromatic erythroblast (CL0000552)
Fold Change: 32.4180
Cell Significance Index: -39.9700 - Cell Name: CD8-alpha-beta-positive, alpha-beta intraepithelial T cell (CL0000796)
Fold Change: 12.6248
Cell Significance Index: -33.8200 - Cell Name: stromal cell of bone marrow (CL0010001)
Fold Change: 10.4940
Cell Significance Index: -41.4100 - Cell Name: CD8-positive, alpha-beta regulatory T cell (CL0000795)
Fold Change: 9.7608
Cell Significance Index: -29.9800 - Cell Name: kidney cell (CL1000497)
Fold Change: 4.5014
Cell Significance Index: 35.9400 - Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
Fold Change: 3.0087
Cell Significance Index: 104.5500 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: 2.2679
Cell Significance Index: 127.2700 - Cell Name: granulosa cell (CL0000501)
Fold Change: 2.0846
Cell Significance Index: 54.8200 - Cell Name: umbrella cell of urothelium (CL4030056)
Fold Change: 2.0752
Cell Significance Index: 19.1100 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 1.9187
Cell Significance Index: 312.0600 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: 1.9088
Cell Significance Index: 262.1300 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 1.7107
Cell Significance Index: 186.0800 - Cell Name: peg cell (CL4033014)
Fold Change: 1.6430
Cell Significance Index: 37.9600 - Cell Name: endothelial cell of venule (CL1000414)
Fold Change: 1.6346
Cell Significance Index: 18.5700 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: 1.6323
Cell Significance Index: 200.7100 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: 1.6109
Cell Significance Index: 290.3900 - Cell Name: interstitial cell of ovary (CL0002094)
Fold Change: 1.4660
Cell Significance Index: 18.7800 - Cell Name: lung endothelial cell (CL1001567)
Fold Change: 1.3055
Cell Significance Index: 68.0000 - Cell Name: cell in vitro (CL0001034)
Fold Change: 1.2006
Cell Significance Index: 655.6700 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 0.7968
Cell Significance Index: 159.8400 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: 0.7908
Cell Significance Index: 41.5200 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: 0.7365
Cell Significance Index: 21.2200 - Cell Name: odontoblast (CL0000060)
Fold Change: 0.7258
Cell Significance Index: 93.0400 - Cell Name: tonsil germinal center B cell (CL2000006)
Fold Change: 0.5946
Cell Significance Index: 70.1200 - Cell Name: colon goblet cell (CL0009039)
Fold Change: 0.5883
Cell Significance Index: 58.2000 - Cell Name: CD4-positive, alpha-beta memory T cell, CD45RO-positive (CL0001204)
Fold Change: 0.5264
Cell Significance Index: 15.4600 - Cell Name: microfold cell of epithelium of small intestine (CL1000353)
Fold Change: 0.5248
Cell Significance Index: 36.3000 - Cell Name: early pro-B cell (CL0002046)
Fold Change: 0.5153
Cell Significance Index: 33.2500 - Cell Name: basal cell of prostate epithelium (CL0002341)
Fold Change: 0.5103
Cell Significance Index: 13.8900 - Cell Name: hair follicular keratinocyte (CL2000092)
Fold Change: 0.4597
Cell Significance Index: 203.2300 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: 0.4471
Cell Significance Index: 6.1000 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: 0.4305
Cell Significance Index: 26.4600 - Cell Name: paneth cell of epithelium of small intestine (CL1000343)
Fold Change: 0.4270
Cell Significance Index: 9.2500 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 0.3692
Cell Significance Index: 132.4300 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: 0.3468
Cell Significance Index: 15.7200 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: 0.2796
Cell Significance Index: 17.6200 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: 0.2793
Cell Significance Index: 13.0200 - Cell Name: enteroendocrine cell of colon (CL0009042)
Fold Change: 0.2570
Cell Significance Index: 48.9000 - Cell Name: fibroblast of mammary gland (CL0002555)
Fold Change: 0.2131
Cell Significance Index: 6.1100 - Cell Name: sebum secreting cell (CL0000317)
Fold Change: 0.1868
Cell Significance Index: 13.2100 - Cell Name: fibroblast of dermis (CL0002551)
Fold Change: 0.1503
Cell Significance Index: 3.1500 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 0.1289
Cell Significance Index: 116.4000 - Cell Name: gut absorptive cell (CL0000677)
Fold Change: 0.1221
Cell Significance Index: 7.3300 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: 0.0618
Cell Significance Index: 10.5600 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: 0.0585
Cell Significance Index: 3.0400 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: 0.0474
Cell Significance Index: 2.2300 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: 0.0350
Cell Significance Index: 2.6900 - Cell Name: theca cell (CL0000503)
Fold Change: 0.0323
Cell Significance Index: 0.1900 - Cell Name: mesenchymal cell (CL0008019)
Fold Change: 0.0275
Cell Significance Index: 0.4600 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: 0.0240
Cell Significance Index: 0.6400 - Cell Name: pancreatic PP cell (CL0002275)
Fold Change: -0.0080
Cell Significance Index: -5.0000 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: -0.0081
Cell Significance Index: -6.1200 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: -0.0163
Cell Significance Index: -30.7500 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0179
Cell Significance Index: -13.2400 - Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
Fold Change: -0.0189
Cell Significance Index: -13.8500 - Cell Name: anterior lens cell (CL0002223)
Fold Change: -0.0210
Cell Significance Index: -38.6800 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: -0.0251
Cell Significance Index: -38.6100 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: -0.0309
Cell Significance Index: -42.0600 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.0521
Cell Significance Index: -5.3200 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0524
Cell Significance Index: -29.5400 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: -0.0605
Cell Significance Index: -38.4000 - Cell Name: transit amplifying cell of small intestine (CL0009012)
Fold Change: -0.0812
Cell Significance Index: -1.6900 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.0873
Cell Significance Index: -18.3900 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: -0.0900
Cell Significance Index: -40.8400 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.1072
Cell Significance Index: -30.8400 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: -0.1107
Cell Significance Index: -3.8900 - Cell Name: lactocyte (CL0002325)
Fold Change: -0.1248
Cell Significance Index: -16.1200 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: -0.1309
Cell Significance Index: -5.7900 - Cell Name: epithelial cell of stomach (CL0002178)
Fold Change: -0.1374
Cell Significance Index: -16.0100 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: -0.1695
Cell Significance Index: -12.6300 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.1733
Cell Significance Index: -19.8500 - Cell Name: retinal rod cell (CL0000604)
Fold Change: -0.1837
Cell Significance Index: -2.1900 - Cell Name: neutrophil progenitor cell (CL0000834)
Fold Change: -0.1875
Cell Significance Index: -5.0200 - Cell Name: pro-T cell (CL0000827)
Fold Change: -0.1914
Cell Significance Index: -4.8900 - Cell Name: transit amplifying cell of colon (CL0009011)
Fold Change: -0.1936
Cell Significance Index: -6.2000 - Cell Name: neoplastic cell (CL0001063)
Fold Change: -0.1995
Cell Significance Index: -39.6000 - Cell Name: preadipocyte (CL0002334)
Fold Change: -0.2039
Cell Significance Index: -3.9800 - Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
Fold Change: -0.2136
Cell Significance Index: -4.5500 - Cell Name: direct pathway medium spiny neuron (CL4023026)
Fold Change: -0.2303
Cell Significance Index: -8.7200 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: -0.2549
Cell Significance Index: -37.0500 - Cell Name: enteroendocrine cell of small intestine (CL0009006)
Fold Change: -0.2960
Cell Significance Index: -7.4000 - Cell Name: basal cell of epidermis (CL0002187)
Fold Change: -0.3022
Cell Significance Index: -4.5900 - Cell Name: pancreatic endocrine cell (CL0008024)
Fold Change: -0.3093
Cell Significance Index: -35.3100 - Cell Name: cortical interneuron (CL0008031)
Fold Change: -0.3277
Cell Significance Index: -7.8600 - Cell Name: tuft cell of small intestine (CL0009080)
Fold Change: -0.3306
Cell Significance Index: -3.3400 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: -0.3544
Cell Significance Index: -9.5000 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: -0.4053
Cell Significance Index: -42.2000 - Cell Name: Hofbauer cell (CL3000001)
Fold Change: -0.4292
Cell Significance Index: -3.5000 - Cell Name: fibro/adipogenic progenitor cell (CL0009099)
Fold Change: -0.4352
Cell Significance Index: -22.0000 - Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
Fold Change: -0.4562
Cell Significance Index: -36.1400 - Cell Name: endothelial cell of placenta (CL0009092)
Fold Change: -0.4568
Cell Significance Index: -2.7600 - Cell Name: paneth cell of colon (CL0009009)
Fold Change: -0.5072
Cell Significance Index: -7.6000 - Cell Name: kidney epithelial cell (CL0002518)
Fold Change: -0.5407
Cell Significance Index: -15.9300
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 2112138246
Symbol: SMCE1_HUMAN
Name: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 9435219
Title: Architectural DNA binding by a high-mobility-group/kinesin-like subunit in mammalian SWI/SNF-related complexes.
PubMed ID: 9435219
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 16625196
Title: DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage.
PubMed ID: 16625196
DOI: 10.1038/nature04689
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 12192000
Title: REST repression of neuronal genes requires components of the hSWI.SNF complex.
PubMed ID: 12192000
PubMed ID: 12110891
Title: Reciprocal regulation of CD4/CD8 expression by SWI/SNF-like BAF complexes.
PubMed ID: 12110891
DOI: 10.1038/nature00876
PubMed ID: 12145209
Title: Targeting of SWI/SNF chromatin remodelling complexes to estrogen-responsive genes.
PubMed ID: 12145209
DOI: 10.1093/emboj/cdf412
PubMed ID: 19690332
Title: Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions.
PubMed ID: 19690332
PubMed ID: 20068231
Title: Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.
PubMed ID: 20068231
PubMed ID: 21269460
Title: Initial characterization of the human central proteome.
PubMed ID: 21269460
PubMed ID: 23186163
Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.
PubMed ID: 23186163
DOI: 10.1021/pr300630k
PubMed ID: 24129315
Title: Immunoaffinity enrichment and mass spectrometry analysis of protein methylation.
PubMed ID: 24129315
PubMed ID: 25218447
Title: Uncovering global SUMOylation signaling networks in a site-specific manner.
PubMed ID: 25218447
DOI: 10.1038/nsmb.2890
PubMed ID: 25114211
Title: Mapping of SUMO sites and analysis of SUMOylation changes induced by external stimuli.
PubMed ID: 25114211
PubMed ID: 25755297
Title: System-wide analysis of SUMOylation dynamics in response to replication stress reveals novel small ubiquitin-like modified target proteins and acceptor lysines relevant for genome stability.
PubMed ID: 25755297
PubMed ID: 28112733
Title: Site-specific mapping of the human SUMO proteome reveals co-modification with phosphorylation.
PubMed ID: 28112733
DOI: 10.1038/nsmb.3366
PubMed ID: 12672490
Title: Recent advances in understanding chromatin remodeling by SWI/SNF complexes.
PubMed ID: 12672490
PubMed ID: 12917342
Title: BAF60a mediates critical interactions between nuclear receptors and the BRG1 chromatin-remodeling complex for transactivation.
PubMed ID: 12917342
PubMed ID: 16051670
Title: hZimp7, a novel PIAS-like protein, enhances androgen receptor-mediated transcription and interacts with SWI/SNF-like BAF complexes.
PubMed ID: 16051670
DOI: 10.1210/me.2005-0097
PubMed ID: 18765789
Title: Regulation of muscle development by DPF3, a novel histone acetylation and methylation reader of the BAF chromatin remodeling complex.
PubMed ID: 18765789
DOI: 10.1101/gad.471408
PubMed ID: 20829358
Title: Ubiquitin-dependent and ubiquitin-independent control of subunit stoichiometry in the SWI/SNF complex.
PubMed ID: 20829358
PubMed ID: 22952240
Title: SWI/SNF chromatin-remodeling factors: multiscale analyses and diverse functions.
PubMed ID: 22952240
PubMed ID: 26601204
Title: Mammalian SWI/SNF chromatin remodeling complexes and cancer: Mechanistic insights gained from human genomics.
PubMed ID: 26601204
PubMed ID: 22426308
Title: Mutations affecting components of the SWI/SNF complex cause Coffin-Siris syndrome.
PubMed ID: 22426308
DOI: 10.1038/ng.2219
PubMed ID: 23377182
Title: Loss-of-function mutations in SMARCE1 cause an inherited disorder of multiple spinal meningiomas.
PubMed ID: 23377182
DOI: 10.1038/ng.2552
PubMed ID: 23906836
Title: A comprehensive molecular study on Coffin-Siris and Nicolaides-Baraitser syndromes identifies a broad molecular and clinical spectrum converging on altered chromatin remodeling.
PubMed ID: 23906836
DOI: 10.1093/hmg/ddt366
PubMed ID: 25249420
Title: Pediatric intracranial clear cell meningioma associated with a germline mutation of SMARCE1: a novel case.
PubMed ID: 25249420
Sequence Information:
- Length: 411
- Mass: 46649
- Checksum: 6F1C1B7917BAD506
- Sequence:
MSKRPSYAPP PTPAPATQMP STPGFVGYNP YSHLAYNNYR LGGNPGTNSR VTASSGITIP KPPKPPDKPL MPYMRYSRKV WDQVKASNPD LKLWEIGKII GGMWRDLTDE EKQEYLNEYE AEKIEYNESM KAYHNSPAYL AYINAKSRAE AALEEESRQR QSRMEKGEPY MSIQPAEDPD DYDDGFSMKH TATARFQRNH RLISEILSES VVPDVRSVVT TARMQVLKRQ VQSLMVHQRK LEAELLQIEE RHQEKKRKFL ESTDSFNNEL KRLCGLKVEV DMEKIAAEIA QAEEQARKRQ EEREKEAAEQ AERSQSSIVP EEEQAANKGE EKKDDENIPM ETEETHLEET TESQQNGEEG TSTPEDKESG QEGVDSMAEE GTSDSNTGSE SNSATVEEPP TDPIPEDEKK E
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.