Details for: TARBP2
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: polychromatophilic erythroblast (CL0000550)
Fold Change: 64.0328
Cell Significance Index: -9.9600 - Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
Fold Change: 35.0098
Cell Significance Index: -8.8800 - Cell Name: smooth muscle fiber of ileum (CL1000278)
Fold Change: 24.5063
Cell Significance Index: -11.5700 - Cell Name: orthochromatic erythroblast (CL0000552)
Fold Change: 9.0271
Cell Significance Index: -11.1300 - Cell Name: CD8-alpha-beta-positive, alpha-beta intraepithelial T cell (CL0000796)
Fold Change: 3.7329
Cell Significance Index: -10.0000 - Cell Name: stromal cell of bone marrow (CL0010001)
Fold Change: 2.8991
Cell Significance Index: -11.4400 - Cell Name: CD8-positive, alpha-beta regulatory T cell (CL0000795)
Fold Change: 2.5949
Cell Significance Index: -7.9700 - Cell Name: colon goblet cell (CL0009039)
Fold Change: 1.0610
Cell Significance Index: 104.9600 - Cell Name: gut absorptive cell (CL0000677)
Fold Change: 0.8196
Cell Significance Index: 49.2100 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: 0.7487
Cell Significance Index: 47.1900 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 0.7339
Cell Significance Index: 79.8300 - Cell Name: kidney cell (CL1000497)
Fold Change: 0.6413
Cell Significance Index: 5.1200 - Cell Name: skeletal muscle myoblast (CL0000515)
Fold Change: 0.6411
Cell Significance Index: 6.9700 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: 0.5952
Cell Significance Index: 30.9200 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 0.5928
Cell Significance Index: 96.4100 - Cell Name: fibroblast of dermis (CL0002551)
Fold Change: 0.5843
Cell Significance Index: 12.2300 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: 0.5484
Cell Significance Index: 14.7000 - Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
Fold Change: 0.3699
Cell Significance Index: 12.8600 - Cell Name: interstitial cell of ovary (CL0002094)
Fold Change: 0.3514
Cell Significance Index: 4.5000 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: 0.3284
Cell Significance Index: 4.4800 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: 0.3276
Cell Significance Index: 9.4400 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 0.3236
Cell Significance Index: 292.1500 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: 0.3102
Cell Significance Index: 14.0600 - Cell Name: CD4-positive, alpha-beta memory T cell, CD45RO-positive (CL0001204)
Fold Change: 0.3058
Cell Significance Index: 8.9800 - Cell Name: paneth cell of epithelium of small intestine (CL1000343)
Fold Change: 0.2977
Cell Significance Index: 6.4500 - Cell Name: microfold cell of epithelium of small intestine (CL1000353)
Fold Change: 0.2827
Cell Significance Index: 19.5500 - Cell Name: paneth cell of colon (CL0009009)
Fold Change: 0.2720
Cell Significance Index: 4.0800 - Cell Name: tonsil germinal center B cell (CL2000006)
Fold Change: 0.2577
Cell Significance Index: 30.3900 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: 0.2149
Cell Significance Index: 10.0200 - Cell Name: peg cell (CL4033014)
Fold Change: 0.2060
Cell Significance Index: 4.7600 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 0.2056
Cell Significance Index: 40.8000 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: 0.1931
Cell Significance Index: 34.8100 - Cell Name: cell in vitro (CL0001034)
Fold Change: 0.1847
Cell Significance Index: 100.8900 - Cell Name: basal cell of prostate epithelium (CL0002341)
Fold Change: 0.1822
Cell Significance Index: 4.9600 - Cell Name: enteroendocrine cell of colon (CL0009042)
Fold Change: 0.1801
Cell Significance Index: 34.2800 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: 0.1610
Cell Significance Index: 4.5000 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: 0.1454
Cell Significance Index: 19.9700 - Cell Name: granulosa cell (CL0000501)
Fold Change: 0.1373
Cell Significance Index: 3.6100 - Cell Name: neutrophil progenitor cell (CL0000834)
Fold Change: 0.1368
Cell Significance Index: 3.6600 - Cell Name: hair follicular keratinocyte (CL2000092)
Fold Change: 0.1348
Cell Significance Index: 59.6100 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: 0.1292
Cell Significance Index: 15.8900 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: 0.1221
Cell Significance Index: 3.2600 - Cell Name: transit amplifying cell of colon (CL0009011)
Fold Change: 0.1218
Cell Significance Index: 3.9000 - Cell Name: early pro-B cell (CL0002046)
Fold Change: 0.0971
Cell Significance Index: 6.2700 - Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
Fold Change: 0.0958
Cell Significance Index: 2.0400 - Cell Name: retinal rod cell (CL0000604)
Fold Change: 0.0864
Cell Significance Index: 1.0300 - Cell Name: basal cell of epidermis (CL0002187)
Fold Change: 0.0724
Cell Significance Index: 1.1000 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 0.0695
Cell Significance Index: 13.9400 - Cell Name: sebum secreting cell (CL0000317)
Fold Change: 0.0594
Cell Significance Index: 4.2000 - Cell Name: odontoblast (CL0000060)
Fold Change: 0.0449
Cell Significance Index: 5.7600 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 0.0366
Cell Significance Index: 13.1400 - Cell Name: umbrella cell of urothelium (CL4030056)
Fold Change: 0.0320
Cell Significance Index: 0.3000 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: 0.0305
Cell Significance Index: 1.0700 - Cell Name: lactocyte (CL0002325)
Fold Change: 0.0284
Cell Significance Index: 3.6700 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: 0.0237
Cell Significance Index: 1.2500 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: 0.0074
Cell Significance Index: 0.3500 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: 0.0065
Cell Significance Index: 4.9200 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: 0.0054
Cell Significance Index: 0.9200 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: -0.0015
Cell Significance Index: -2.8400 - Cell Name: mesenchymal cell (CL0008019)
Fold Change: -0.0018
Cell Significance Index: -0.0300 - Cell Name: anterior lens cell (CL0002223)
Fold Change: -0.0057
Cell Significance Index: -10.4200 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: -0.0071
Cell Significance Index: -10.9900 - Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
Fold Change: -0.0076
Cell Significance Index: -5.5700 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: -0.0093
Cell Significance Index: -12.6500 - Cell Name: cerebellar granule cell (CL0001031)
Fold Change: -0.0099
Cell Significance Index: -0.1700 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: -0.0111
Cell Significance Index: -7.0600 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0122
Cell Significance Index: -9.0500 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.0140
Cell Significance Index: -1.4400 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: -0.0140
Cell Significance Index: -1.0400 - Cell Name: pro-T cell (CL0000827)
Fold Change: -0.0141
Cell Significance Index: -0.3600 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0160
Cell Significance Index: -9.0000 - Cell Name: pancreatic PP cell (CL0002275)
Fold Change: -0.0199
Cell Significance Index: -12.4500 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: -0.0230
Cell Significance Index: -10.4400 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.0296
Cell Significance Index: -8.5300 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: -0.0301
Cell Significance Index: -4.3700 - Cell Name: endothelial cell of venule (CL1000414)
Fold Change: -0.0308
Cell Significance Index: -0.3500 - Cell Name: epithelial cell of stomach (CL0002178)
Fold Change: -0.0420
Cell Significance Index: -4.8900 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.0433
Cell Significance Index: -4.9600 - Cell Name: Sertoli cell (CL0000216)
Fold Change: -0.0556
Cell Significance Index: -0.7800 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.0592
Cell Significance Index: -12.4600 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: -0.1078
Cell Significance Index: -11.2200 - Cell Name: medial ganglionic eminence derived interneuron (CL4023063)
Fold Change: -0.1103
Cell Significance Index: -1.5800 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: -0.1119
Cell Significance Index: -6.2800 - Cell Name: Purkinje cell (CL0000121)
Fold Change: -0.1130
Cell Significance Index: -2.4800 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: -0.1136
Cell Significance Index: -8.7200 - Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
Fold Change: -0.1174
Cell Significance Index: -9.3000 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: -0.1217
Cell Significance Index: -8.1800 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: -0.1318
Cell Significance Index: -8.1000 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: -0.1581
Cell Significance Index: -9.6900 - Cell Name: proerythroblast (CL0000547)
Fold Change: -0.1629
Cell Significance Index: -2.3400 - Cell Name: melanocyte of skin (CL1000458)
Fold Change: -0.1634
Cell Significance Index: -2.2900 - Cell Name: BEST4+ enteroycte (CL4030026)
Fold Change: -0.1666
Cell Significance Index: -2.5100 - Cell Name: ovarian surface epithelial cell (CL2000064)
Fold Change: -0.1768
Cell Significance Index: -0.8600 - Cell Name: intestinal epithelial cell (CL0002563)
Fold Change: -0.1785
Cell Significance Index: -1.8500 - Cell Name: kidney epithelial cell (CL0002518)
Fold Change: -0.1803
Cell Significance Index: -5.3100 - Cell Name: mesodermal cell (CL0000222)
Fold Change: -0.1997
Cell Significance Index: -1.2500 - Cell Name: epithelial cell of uterus (CL0002149)
Fold Change: -0.2018
Cell Significance Index: -2.8000 - Cell Name: CD14-positive, CD16-negative classical monocyte (CL0002057)
Fold Change: -0.2086
Cell Significance Index: -3.8600 - Cell Name: enteroendocrine cell of small intestine (CL0009006)
Fold Change: -0.2104
Cell Significance Index: -5.2600 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: -0.2109
Cell Significance Index: -9.3300
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 3410427334
Symbol: TRBP2_HUMAN
Name: TAR RNA-binding protein 2
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 2011739
Title: Characterization of a human TAR RNA-binding protein that activates the HIV-1 LTR.
PubMed ID: 2011739
PubMed ID: 7774957
Title: Genetic mapping in human and mouse of the locus encoding TRBP, a protein that binds the TAR region of the human immunodeficiency virus (HIV-1).
PubMed ID: 7774957
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 11641396
Title: Organization of the human tarbp2 gene reveals two promoters that are repressed in an astrocytic cell line.
PubMed ID: 11641396
PubMed ID: 8455607
Title: Relatedness of an RNA-binding motif in human immunodeficiency virus type 1 TAR RNA-binding protein TRBP to human P1/dsI kinase and Drosophila staufen.
PubMed ID: 8455607
PubMed ID: 11438532
Title: Two dimerization domains in the trans-activation response RNA-binding protein (TRBP) individually reverse the protein kinase R inhibition of HIV-1 long terminal repeat expression.
PubMed ID: 11438532
PubMed ID: 12475984
Title: The TAR RNA-binding protein, TRBP, stimulates the expression of TAR-containing RNAs in vitro and in vivo independently of its ability to inhibit the dsRNA-dependent kinase PKR.
PubMed ID: 12475984
PubMed ID: 16271387
Title: Human RISC couples microRNA biogenesis and posttranscriptional gene silencing.
PubMed ID: 16271387
PubMed ID: 16142218
Title: TRBP, a regulator of cellular PKR and HIV-1 virus expression, interacts with Dicer and functions in RNA silencing.
PubMed ID: 16142218
PubMed ID: 16357216
Title: A human, ATP-independent, RISC assembly machine fueled by pre-miRNA.
PubMed ID: 16357216
DOI: 10.1101/gad.1384005
PubMed ID: 15973356
Title: TRBP recruits the Dicer complex to Ago2 for microRNA processing and gene silencing.
PubMed ID: 15973356
DOI: 10.1038/nature03868
PubMed ID: 16424907
Title: The role of PACT in the RNA silencing pathway.
PubMed ID: 16424907
PubMed ID: 17452327
Title: Human TRBP and PACT directly interact with each other and associate with dicer to facilitate the production of small interfering RNA.
PubMed ID: 17452327
PubMed ID: 17531811
Title: RNA helicase A interacts with RISC in human cells and functions in RISC loading.
PubMed ID: 17531811
PubMed ID: 17507929
Title: MicroRNA silencing through RISC recruitment of eIF6.
PubMed ID: 17507929
DOI: 10.1038/nature05841
PubMed ID: 18669648
Title: A quantitative atlas of mitotic phosphorylation.
PubMed ID: 18669648
PubMed ID: 18178619
Title: In vitro reconstitution of the human RISC-loading complex.
PubMed ID: 18178619
PubMed ID: 18421256
Title: Interactions between the double-stranded RNA-binding proteins TRBP and PACT define the Medipal domain that mediates protein-protein interactions.
PubMed ID: 18421256
DOI: 10.4161/rna.5.2.6069
PubMed ID: 19219043
Title: A TARBP2 mutation in human cancer impairs microRNA processing and DICER1 function.
PubMed ID: 19219043
DOI: 10.1038/ng.317
PubMed ID: 26813765
Title: Retraction: A TARBP2 mutation in human cancer impairs microRNA processing and DICER1 function.
PubMed ID: 26813765
DOI: 10.1038/ng0216-221
PubMed ID: 21269460
Title: Initial characterization of the human central proteome.
PubMed ID: 21269460
PubMed ID: 21228243
Title: Ebolavirus proteins suppress the effects of small interfering RNA by direct interaction with the mammalian RNA interference pathway.
PubMed ID: 21228243
DOI: 10.1128/jvi.01160-10
PubMed ID: 23063653
Title: Dicer partner proteins tune the length of mature miRNAs in flies and mammals.
PubMed ID: 23063653
PubMed ID: 24275569
Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.
PubMed ID: 24275569
PubMed ID: 30626973
Title: FTSJ3 is an RNA 2'-O-methyltransferase recruited by HIV to avoid innate immune sensing.
PubMed ID: 30626973
PubMed ID: 30927622
Title: TARBP2 inhibits IRF7 activation by suppressing TRAF6-mediated K63-linked ubiquitination of IRF7.
PubMed ID: 30927622
Sequence Information:
- Length: 366
- Mass: 39039
- Checksum: 768BA11751DA4912
- Sequence:
MSEEEQGSGT TTGCGLPSIE QMLAANPGKT PISLLQEYGT RIGKTPVYDL LKAEGQAHQP NFTFRVTVGD TSCTGQGPSK KAAKHKAAEV ALKHLKGGSM LEPALEDSSS FSPLDSSLPE DIPVFTAAAA ATPVPSVVLT RSPPMELQPP VSPQQSECNP VGALQELVVQ KGWRLPEYTV TQESGPAHRK EFTMTCRVER FIEIGSGTSK KLAKRNAAAK MLLRVHTVPL DARDGNEVEP DDDHFSIGVG SRLDGLRNRG PGCTWDSLRN SVGEKILSLR SCSLGSLGAL GPACCRVLSE LSEEQAFHVS YLDIEELSLS GLCQCLVELS TQPATVCHGS ATTREAARGE AARRALQYLK IMAGSK
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.