Details for: TERF1
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: polychromatophilic erythroblast (CL0000550)
Fold Change: 281.9116
Cell Significance Index: -43.8500 - Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
Fold Change: 159.6336
Cell Significance Index: -40.4900 - Cell Name: embryonic stem cell (CL0002322)
Fold Change: 118.8501
Cell Significance Index: -48.9600 - Cell Name: smooth muscle fiber of ileum (CL1000278)
Fold Change: 103.8290
Cell Significance Index: -49.0200 - Cell Name: mucosal type mast cell (CL0000485)
Fold Change: 97.7952
Cell Significance Index: -39.7300 - Cell Name: peripheral blood mononuclear cell (CL2000001)
Fold Change: 90.5158
Cell Significance Index: -46.5600 - Cell Name: ciliated cell of the bronchus (CL0002332)
Fold Change: 41.9589
Cell Significance Index: -40.0600 - Cell Name: orthochromatic erythroblast (CL0000552)
Fold Change: 38.6794
Cell Significance Index: -47.6900 - Cell Name: CD8-alpha-beta-positive, alpha-beta intraepithelial T cell (CL0000796)
Fold Change: 14.2038
Cell Significance Index: -38.0500 - Cell Name: stromal cell of bone marrow (CL0010001)
Fold Change: 12.2553
Cell Significance Index: -48.3600 - Cell Name: CD8-positive, alpha-beta regulatory T cell (CL0000795)
Fold Change: 11.7859
Cell Significance Index: -36.2000 - Cell Name: epidermal Langerhans cell (CL0002457)
Fold Change: 8.2199
Cell Significance Index: -17.9900 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 1.7073
Cell Significance Index: 342.4900 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: 1.3595
Cell Significance Index: 71.3800 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 1.0995
Cell Significance Index: 119.6000 - Cell Name: microcirculation associated smooth muscle cell (CL0008035)
Fold Change: 1.0536
Cell Significance Index: 8.8500 - Cell Name: gut absorptive cell (CL0000677)
Fold Change: 0.9634
Cell Significance Index: 57.8400 - Cell Name: early pro-B cell (CL0002046)
Fold Change: 0.9574
Cell Significance Index: 61.7700 - Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
Fold Change: 0.9537
Cell Significance Index: 33.1400 - Cell Name: odontoblast (CL0000060)
Fold Change: 0.9080
Cell Significance Index: 116.4000 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 0.8889
Cell Significance Index: 318.8400 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: 0.8553
Cell Significance Index: 57.5100 - Cell Name: fibroblast of dermis (CL0002551)
Fold Change: 0.8518
Cell Significance Index: 17.8300 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: 0.8135
Cell Significance Index: 111.7200 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: 0.6583
Cell Significance Index: 40.4600 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 0.6094
Cell Significance Index: 550.2400 - Cell Name: GABAergic interneuron (CL0011005)
Fold Change: 0.6013
Cell Significance Index: 415.8600 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: 0.5635
Cell Significance Index: 101.5900 - Cell Name: hair follicular keratinocyte (CL2000092)
Fold Change: 0.5501
Cell Significance Index: 243.2000 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: 0.5443
Cell Significance Index: 66.9300 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 0.5276
Cell Significance Index: 104.7100 - Cell Name: cell in vitro (CL0001034)
Fold Change: 0.5276
Cell Significance Index: 288.1300 - Cell Name: microfold cell of epithelium of small intestine (CL1000353)
Fold Change: 0.4981
Cell Significance Index: 34.4500 - Cell Name: basal cell of prostate epithelium (CL0002341)
Fold Change: 0.4848
Cell Significance Index: 13.2000 - Cell Name: lung endothelial cell (CL1001567)
Fold Change: 0.4396
Cell Significance Index: 22.9000 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: 0.3990
Cell Significance Index: 22.3900 - Cell Name: sebum secreting cell (CL0000317)
Fold Change: 0.2774
Cell Significance Index: 19.6200 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: 0.2334
Cell Significance Index: 14.7100 - Cell Name: cerebellar granule cell (CL0001031)
Fold Change: 0.2142
Cell Significance Index: 3.6700 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: 0.1952
Cell Significance Index: 9.1000 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: 0.1906
Cell Significance Index: 8.6400 - Cell Name: GABAergic amacrine cell (CL4030027)
Fold Change: 0.1895
Cell Significance Index: 2.3500 - Cell Name: colon goblet cell (CL0009039)
Fold Change: 0.1654
Cell Significance Index: 16.3600 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: 0.1635
Cell Significance Index: 4.7100 - Cell Name: cortical interneuron (CL0008031)
Fold Change: 0.1521
Cell Significance Index: 3.6500 - Cell Name: kidney cell (CL1000497)
Fold Change: 0.1503
Cell Significance Index: 1.2000 - Cell Name: basal cell of epidermis (CL0002187)
Fold Change: 0.1291
Cell Significance Index: 1.9600 - Cell Name: enteroendocrine cell of colon (CL0009042)
Fold Change: 0.1164
Cell Significance Index: 22.1600 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: 0.1128
Cell Significance Index: 4.9900 - Cell Name: tonsil germinal center B cell (CL2000006)
Fold Change: 0.1068
Cell Significance Index: 12.6000 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: 0.1023
Cell Significance Index: 17.4700 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: 0.0873
Cell Significance Index: 164.3800 - Cell Name: direct pathway medium spiny neuron (CL4023026)
Fold Change: 0.0660
Cell Significance Index: 2.5000 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: 0.0557
Cell Significance Index: 0.7600 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: 0.0272
Cell Significance Index: 2.0900 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: 0.0268
Cell Significance Index: 17.0400 - Cell Name: anterior lens cell (CL0002223)
Fold Change: 0.0256
Cell Significance Index: 47.3000 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: 0.0205
Cell Significance Index: 9.3100 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: 0.0153
Cell Significance Index: 23.5300 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: 0.0152
Cell Significance Index: 20.6100 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: 0.0077
Cell Significance Index: 0.2700 - Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
Fold Change: -0.0150
Cell Significance Index: -11.0000 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0279
Cell Significance Index: -20.6900 - Cell Name: pancreatic PP cell (CL0002275)
Fold Change: -0.0337
Cell Significance Index: -21.0500 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: -0.0411
Cell Significance Index: -31.1100 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0614
Cell Significance Index: -34.6100 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: -0.0635
Cell Significance Index: -3.3000 - Cell Name: mesenchymal cell (CL0008019)
Fold Change: -0.0675
Cell Significance Index: -1.1300 - Cell Name: lactocyte (CL0002325)
Fold Change: -0.0720
Cell Significance Index: -9.3100 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: -0.0780
Cell Significance Index: -2.1800 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.0821
Cell Significance Index: -8.3900 - Cell Name: paneth cell of epithelium of small intestine (CL1000343)
Fold Change: -0.0919
Cell Significance Index: -1.9900 - Cell Name: granulosa cell (CL0000501)
Fold Change: -0.0968
Cell Significance Index: -2.5500 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: -0.1226
Cell Significance Index: -5.7600 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.1314
Cell Significance Index: -27.6800 - Cell Name: hippocampal pyramidal neuron (CL1001571)
Fold Change: -0.1353
Cell Significance Index: -3.8600 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: -0.1412
Cell Significance Index: -10.5300 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.1471
Cell Significance Index: -42.3200 - Cell Name: retinal rod cell (CL0000604)
Fold Change: -0.1493
Cell Significance Index: -1.7800 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: -0.1652
Cell Significance Index: -4.4100 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: -0.1725
Cell Significance Index: -25.0800 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.1904
Cell Significance Index: -21.8100 - Cell Name: epithelial cell of stomach (CL0002178)
Fold Change: -0.2403
Cell Significance Index: -28.0000 - Cell Name: peg cell (CL4033014)
Fold Change: -0.2831
Cell Significance Index: -6.5400 - Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
Fold Change: -0.2841
Cell Significance Index: -6.0500 - Cell Name: pro-T cell (CL0000827)
Fold Change: -0.2889
Cell Significance Index: -7.3800 - Cell Name: pancreatic endocrine cell (CL0008024)
Fold Change: -0.3007
Cell Significance Index: -34.3200 - Cell Name: cone retinal bipolar cell (CL0000752)
Fold Change: -0.3179
Cell Significance Index: -2.4500 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: -0.3440
Cell Significance Index: -35.8200 - Cell Name: transit amplifying cell of small intestine (CL0009012)
Fold Change: -0.3765
Cell Significance Index: -7.8100 - Cell Name: fibroblast of mammary gland (CL0002555)
Fold Change: -0.4029
Cell Significance Index: -11.5500 - Cell Name: transit amplifying cell of colon (CL0009011)
Fold Change: -0.4149
Cell Significance Index: -13.2900 - Cell Name: skeletal muscle myoblast (CL0000515)
Fold Change: -0.4526
Cell Significance Index: -4.9200 - Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
Fold Change: -0.4952
Cell Significance Index: -39.2200 - Cell Name: Purkinje cell (CL0000121)
Fold Change: -0.5042
Cell Significance Index: -11.0400 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: -0.5904
Cell Significance Index: -36.2000 - Cell Name: preadipocyte (CL0002334)
Fold Change: -0.6015
Cell Significance Index: -11.7400 - Cell Name: enteric smooth muscle cell (CL0002504)
Fold Change: -0.6756
Cell Significance Index: -3.5600 - Cell Name: CD4-positive, alpha-beta memory T cell, CD45RO-positive (CL0001204)
Fold Change: -0.6973
Cell Significance Index: -20.4800 - Cell Name: skeletal muscle fiber (CL0008002)
Fold Change: -0.7796
Cell Significance Index: -20.0400
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 3541506149
Symbol: TERF1_HUMAN
Name: Telomeric repeat-binding factor 1
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 7502076
PubMed ID: 9326950
Title: Human telomeres contain two distinct Myb-related proteins, TRF1 and TRF2.
PubMed ID: 9326950
DOI: 10.1038/ng1097-231
PubMed ID: 9391075
Title: Characterization and cell cycle regulation of the related human telomeric proteins Pin2 and TRF1 suggest a role in mitosis.
PubMed ID: 9391075
PubMed ID: 16421571
Title: DNA sequence and analysis of human chromosome 8.
PubMed ID: 16421571
DOI: 10.1038/nature04406
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 8614633
Title: The telobox, a Myb-related telomeric DNA binding motif found in proteins from yeast, plants and human.
PubMed ID: 8614633
PubMed ID: 11375976
Title: Telomeric protein Pin2/TRF1 as an important ATM target in response to double strand DNA breaks.
PubMed ID: 11375976
PubMed ID: 11943150
Title: Involvement of the telomeric protein Pin2/TRF1 in the regulation of the mitotic spindle.
PubMed ID: 11943150
PubMed ID: 11739745
Title: Role for the related poly(ADP-Ribose) polymerases tankyrase 1 and 2 at human telomeres.
PubMed ID: 11739745
PubMed ID: 12768206
Title: POT1 as a terminal transducer of TRF1 telomere length control.
PubMed ID: 12768206
DOI: 10.1038/nature01688
PubMed ID: 15316005
Title: TIN2 binds TRF1 and TRF2 simultaneously and stabilizes the TRF2 complex on telomeres.
PubMed ID: 15316005
PubMed ID: 15383534
Title: Telosome, a mammalian telomere-associated complex formed by multiple telomeric proteins.
PubMed ID: 15383534
PubMed ID: 16166375
Title: Shelterin: the protein complex that shapes and safeguards human telomeres.
PubMed ID: 16166375
DOI: 10.1101/gad.1346005
PubMed ID: 17081983
Title: Global, in vivo, and site-specific phosphorylation dynamics in signaling networks.
PubMed ID: 17081983
PubMed ID: 18669648
Title: A quantitative atlas of mitotic phosphorylation.
PubMed ID: 18669648
PubMed ID: 19413330
Title: Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach.
PubMed ID: 19413330
DOI: 10.1021/ac9004309
PubMed ID: 19164295
Title: Ubiquitin ligase RLIM modulates telomere length homeostasis through a proteolysis of TRF1.
PubMed ID: 19164295
PubMed ID: 19487455
Title: GNL3L stabilizes the TRF1 complex and promotes mitotic transition.
PubMed ID: 19487455
PubMed ID: 20068231
Title: Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.
PubMed ID: 20068231
PubMed ID: 23186163
Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.
PubMed ID: 23186163
DOI: 10.1021/pr300630k
PubMed ID: 23959892
Title: Inherited mutations in the helicase RTEL1 cause telomere dysfunction and Hoyeraal-Hreidarsson syndrome.
PubMed ID: 23959892
PubMed ID: 24692559
Title: The 68-kDa telomeric repeat binding factor 1 (TRF1)-associated protein (TAP68) interacts with and recruits TRF1 to the spindle pole during mitosis.
PubMed ID: 24692559
PubMed ID: 28112733
Title: Site-specific mapping of the human SUMO proteome reveals co-modification with phosphorylation.
PubMed ID: 28112733
DOI: 10.1038/nsmb.3366
PubMed ID: 9739097
Title: Solution structure of the DNA-binding domain of human telomeric protein, hTRF1.
PubMed ID: 9739097
PubMed ID: 11738049
Title: Solution structure of a telomeric DNA complex of human TRF1.
PubMed ID: 11738049
PubMed ID: 11545737
Title: Structure of the TRFH dimerization domain of the human telomeric proteins TRF1 and TRF2.
PubMed ID: 11545737
PubMed ID: 15608617
Title: How the human telomeric proteins TRF1 and TRF2 recognize telomeric DNA: a view from high-resolution crystal structures.
PubMed ID: 15608617
PubMed ID: 18202258
Title: A shared docking motif in TRF1 and TRF2 used for differential recruitment of telomeric proteins.
PubMed ID: 18202258
PubMed ID: 20159592
Title: Structural basis of selective ubiquitination of TRF1 by SCFFbx4.
PubMed ID: 20159592
Sequence Information:
- Length: 439
- Mass: 50246
- Checksum: AB548E7D3124A211
- Sequence:
MAEDVSSAAP SPRGCADGRD ADPTEEQMAE TERNDEEQFE CQELLECQVQ VGAPEEEEEE EEDAGLVAEA EAVAAGWMLD FLCLSLCRAF RDGRSEDFRR TRNSAEAIIH GLSSLTACQL RTIYICQFLT RIAAGKTLDA QFENDERITP LESALMIWGS IEKEHDKLHE EIQNLIKIQA IAVCMENGNF KEAEEVFERI FGDPNSHMPF KSKLLMIISQ KDTFHSFFQH FSYNHMMEKI KSYVNYVLSE KSSTFLMKAA AKVVESKRTR TITSQDKPSG NDVEMETEAN LDTRKSVSDK QSAVTESSEG TVSLLRSHKN LFLSKLQHGT QQQDLNKKER RVGTPQSTKK KKESRRATES RIPVSKSQPV TPEKHRARKR QAWLWEEDKN LRSGVRKYGE GNWSKILLHY KFNNRTSVML KDRWRTMKKL KLISSDSED
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.