Details for: SMARCA5
Associated with
Cells (max top 100)
(Marker Score score is uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: epithelial cell of lower respiratory tract (CL0002632)
Fold Change: 4.1
Marker Score: 17090 - Cell Name: GABAergic neuron (CL0000617)
Fold Change: 3.08
Marker Score: 12838 - Cell Name: skeletal muscle satellite stem cell (CL0008011)
Fold Change: 1.98
Marker Score: 2111 - Cell Name: myeloid leukocyte (CL0000766)
Fold Change: 1.92
Marker Score: 2313 - Cell Name: neural progenitor cell (CL0011020)
Fold Change: 1.85
Marker Score: 7179 - Cell Name: Sertoli cell (CL0000216)
Fold Change: 1.85
Marker Score: 10968 - Cell Name: lung endothelial cell (CL1001567)
Fold Change: 1.81
Marker Score: 15873 - Cell Name: oogonial cell (CL0000024)
Fold Change: 1.8
Marker Score: 2582 - Cell Name: type I NK T cell (CL0000921)
Fold Change: 1.79
Marker Score: 1404 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: 1.77
Marker Score: 2614 - Cell Name: cell in vitro (CL0001034)
Fold Change: 1.76
Marker Score: 61136.5 - Cell Name: fraction A pre-pro B cell (CL0002045)
Fold Change: 1.76
Marker Score: 1773 - Cell Name: large pre-B-II cell (CL0000957)
Fold Change: 1.76
Marker Score: 4776 - Cell Name: ciliated cell (CL0000064)
Fold Change: 1.72
Marker Score: 5898 - Cell Name: CD8-positive, alpha-beta cytokine secreting effector T cell (CL0000908)
Fold Change: 1.7
Marker Score: 734 - Cell Name: Unknown (CL0002371)
Fold Change: 1.69
Marker Score: 1792 - Cell Name: nasal mucosa goblet cell (CL0002480)
Fold Change: 1.68
Marker Score: 1124 - Cell Name: microfold cell of epithelium of small intestine (CL1000353)
Fold Change: 1.67
Marker Score: 399 - Cell Name: pro-B cell (CL0000826)
Fold Change: 1.67
Marker Score: 1611 - Cell Name: CD8-positive, alpha-beta memory T cell, CD45RO-positive (CL0001203)
Fold Change: 1.66
Marker Score: 4646 - Cell Name: respiratory epithelial cell (CL0002368)
Fold Change: 1.65
Marker Score: 909 - Cell Name: epithelial cell of nephron (CL1000449)
Fold Change: 1.65
Marker Score: 3444 - Cell Name: granulosa cell (CL0000501)
Fold Change: 1.64
Marker Score: 16507 - Cell Name: early pro-B cell (CL0002046)
Fold Change: 1.64
Marker Score: 16602 - Cell Name: Unknown (CL0000548)
Fold Change: 1.63
Marker Score: 1190 - Cell Name: type II pneumocyte (CL0002063)
Fold Change: 1.63
Marker Score: 10639 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: 1.63
Marker Score: 18379 - Cell Name: fibroblast of mammary gland (CL0002555)
Fold Change: 1.63
Marker Score: 55400 - Cell Name: male germ cell (CL0000015)
Fold Change: 1.61
Marker Score: 464 - Cell Name: ovarian surface epithelial cell (CL2000064)
Fold Change: 1.61
Marker Score: 4373 - Cell Name: DN1 thymic pro-T cell (CL0000894)
Fold Change: 1.61
Marker Score: 498 - Cell Name: bronchus fibroblast of lung (CL2000093)
Fold Change: 1.61
Marker Score: 2207.5 - Cell Name: primordial germ cell (CL0000670)
Fold Change: 1.61
Marker Score: 2013 - Cell Name: mesenchymal cell (CL0008019)
Fold Change: 1.6
Marker Score: 2726 - Cell Name: neural crest cell (CL0011012)
Fold Change: 1.6
Marker Score: 1705 - Cell Name: small pre-B-II cell (CL0000954)
Fold Change: 1.58
Marker Score: 1901 - Cell Name: Leydig cell (CL0000178)
Fold Change: 1.58
Marker Score: 1704 - Cell Name: ciliated columnar cell of tracheobronchial tree (CL0002145)
Fold Change: 1.58
Marker Score: 13718.5 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: 1.58
Marker Score: 1662 - Cell Name: P/D1 enteroendocrine cell (CL0002268)
Fold Change: 1.58
Marker Score: 587 - Cell Name: kidney epithelial cell (CL0002518)
Fold Change: 1.56
Marker Score: 1647 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: 1.55
Marker Score: 463 - Cell Name: DN3 thymocyte (CL0000807)
Fold Change: 1.55
Marker Score: 776 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: 1.55
Marker Score: 6500 - Cell Name: rod bipolar cell (CL0000751)
Fold Change: 1.54
Marker Score: 807 - Cell Name: migratory enteric neural crest cell (CL0002607)
Fold Change: 1.53
Marker Score: 1437 - Cell Name: cortical thymic epithelial cell (CL0002364)
Fold Change: 1.52
Marker Score: 5620 - Cell Name: ependymal cell (CL0000065)
Fold Change: 1.52
Marker Score: 529 - Cell Name: melanocyte (CL0000148)
Fold Change: 1.52
Marker Score: 614 - Cell Name: type A enteroendocrine cell (CL0002067)
Fold Change: 1.5
Marker Score: 605 - Cell Name: blood cell (CL0000081)
Fold Change: 1.5
Marker Score: 17409 - Cell Name: CD8-alpha-alpha-positive, alpha-beta intraepithelial T cell (CL0000915)
Fold Change: 1.5
Marker Score: 2120 - Cell Name: basal cell (CL0000646)
Fold Change: 1.5
Marker Score: 1932 - Cell Name: common lymphoid progenitor (CL0000051)
Fold Change: 1.5
Marker Score: 1019 - Cell Name: smooth muscle cell of large intestine (CL1000279)
Fold Change: 1.49
Marker Score: 564 - Cell Name: kidney collecting duct principal cell (CL1001431)
Fold Change: 1.49
Marker Score: 3752 - Cell Name: neural cell (CL0002319)
Fold Change: 1.49
Marker Score: 717 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: 1.48
Marker Score: 1796.5 - Cell Name: plasmablast (CL0000980)
Fold Change: 1.48
Marker Score: 1972 - Cell Name: epithelial cell (CL0000066)
Fold Change: 1.48
Marker Score: 2355 - Cell Name: mesangial cell (CL0000650)
Fold Change: 1.48
Marker Score: 1786 - Cell Name: Bergmann glial cell (CL0000644)
Fold Change: 1.48
Marker Score: 602.5 - Cell Name: B-1 B cell (CL0000819)
Fold Change: 1.46
Marker Score: 2553 - Cell Name: alpha-beta T cell (CL0000789)
Fold Change: 1.46
Marker Score: 1109 - Cell Name: CD4-positive helper T cell (CL0000492)
Fold Change: 1.46
Marker Score: 1589 - Cell Name: endothelial cell of hepatic sinusoid (CL1000398)
Fold Change: 1.46
Marker Score: 319 - Cell Name: interstitial cell of ovary (CL0002094)
Fold Change: 1.45
Marker Score: 9458 - Cell Name: luminal epithelial cell of mammary gland (CL0002326)
Fold Change: 1.45
Marker Score: 2564 - Cell Name: enteric smooth muscle cell (CL0002504)
Fold Change: 1.44
Marker Score: 3398 - Cell Name: mononuclear phagocyte (CL0000113)
Fold Change: 1.44
Marker Score: 1449 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: 1.43
Marker Score: 14809 - Cell Name: anterior lens cell (CL0002223)
Fold Change: 1.43
Marker Score: 1928 - Cell Name: vip GABAergic cortical interneuron (CL4023016)
Fold Change: 1.43
Marker Score: 54397 - Cell Name: hepatocyte (CL0000182)
Fold Change: 1.43
Marker Score: 976.5 - Cell Name: epidermal cell (CL0000362)
Fold Change: 1.43
Marker Score: 400.5 - Cell Name: late pro-B cell (CL0002048)
Fold Change: 1.42
Marker Score: 1681 - Cell Name: keratocyte (CL0002363)
Fold Change: 1.42
Marker Score: 326 - Cell Name: kidney cell (CL1000497)
Fold Change: 1.42
Marker Score: 945 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: 1.41
Marker Score: 413 - Cell Name: mesenchymal stem cell (CL0000134)
Fold Change: 1.41
Marker Score: 2174 - Cell Name: bronchial epithelial cell (CL0002328)
Fold Change: 1.4
Marker Score: 370 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: 1.4
Marker Score: 1450 - Cell Name: primitive red blood cell (CL0002355)
Fold Change: 1.39
Marker Score: 1042 - Cell Name: hematopoietic multipotent progenitor cell (CL0000837)
Fold Change: 1.39
Marker Score: 678 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
Fold Change: 1.38
Marker Score: 11895 - Cell Name: Schwann cell (CL0002573)
Fold Change: 1.38
Marker Score: 480 - Cell Name: respiratory goblet cell (CL0002370)
Fold Change: 1.38
Marker Score: 399 - Cell Name: adventitial cell (CL0002503)
Fold Change: 1.38
Marker Score: 340 - Cell Name: neuroblast (sensu Vertebrata) (CL0000031)
Fold Change: 1.38
Marker Score: 864 - Cell Name: enteric neuron (CL0007011)
Fold Change: 1.37
Marker Score: 731 - Cell Name: hematopoietic cell (CL0000988)
Fold Change: 1.37
Marker Score: 912 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: 1.37
Marker Score: 5386 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 1.37
Marker Score: 84195 - Cell Name: kidney loop of Henle thick ascending limb epithelial cell (CL1001106)
Fold Change: 1.37
Marker Score: 3662 - Cell Name: erythroblast (CL0000765)
Fold Change: 1.36
Marker Score: 848 - Cell Name: papillary tips cell (CL1000597)
Fold Change: 1.36
Marker Score: 274 - Cell Name: mesodermal cell (CL0000222)
Fold Change: 1.36
Marker Score: 17888 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: 1.35
Marker Score: 2971 - Cell Name: lactocyte (CL0002325)
Fold Change: 1.35
Marker Score: 21713 - Cell Name: kidney loop of Henle thin ascending limb epithelial cell (CL1001107)
Fold Change: 1.35
Marker Score: 1371
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Other Information
Genular Protein ID: 3646918632
Symbol: SMCA5_HUMAN
Name: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 9730600
Title: Cloning and mapping of SMARCA5 encoding hSNF2H, a novel human homologue of Drosophila ISWI.
PubMed ID: 9730600
DOI: 10.1159/000015027
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 10880450
Title: HuCHRAC, a human ISWI chromatin remodelling complex contains hACF1 and two novel histone-fold proteins.
PubMed ID: 10880450
PubMed ID: 10914549
Title: Chromatin remodeling gene SMARCA5 is dysregulated in primitive hematopoietic cells of acute leukemia.
PubMed ID: 10914549
PubMed ID: 10655480
Title: A family of chromatin remodeling factors related to Williams syndrome transcription factor.
PubMed ID: 10655480
PubMed ID: 11435432
Title: Functional differences between the human ATP-dependent nucleosome remodeling proteins BRG1 and SNF2H.
PubMed ID: 11435432
PubMed ID: 11980720
Title: WSTF-ISWI chromatin remodeling complex targets heterochromatic replication foci.
PubMed ID: 11980720
PubMed ID: 12434153
Title: An ACF1-ISWI chromatin-remodeling complex is required for DNA replication through heterochromatin.
PubMed ID: 12434153
DOI: 10.1038/ng1046
PubMed ID: 12198550
Title: A chromatin remodelling complex that loads cohesin onto human chromosomes.
PubMed ID: 12198550
DOI: 10.1038/nature01024
PubMed ID: 12972596
Title: Functional analysis of the subunits of the chromatin assembly factor RSF.
PubMed ID: 12972596
PubMed ID: 15284901
PubMed ID: 14759371
Title: The histone-fold protein complex CHRAC-15/17 enhances nucleosome sliding and assembly mediated by ACF.
PubMed ID: 14759371
PubMed ID: 15543136
Title: The Williams syndrome transcription factor interacts with PCNA to target chromatin remodelling by ISWI to replication foci.
PubMed ID: 15543136
DOI: 10.1038/ncb1196
PubMed ID: 17081983
Title: Global, in vivo, and site-specific phosphorylation dynamics in signaling networks.
PubMed ID: 17081983
PubMed ID: 16603771
Title: The WSTF-SNF2h chromatin remodeling complex interacts with several nuclear proteins in transcription.
PubMed ID: 16603771
PubMed ID: 17693683
Title: Quantitative phosphoproteome profiling of Wnt3a-mediated signaling network: indicating the involvement of ribonucleoside-diphosphate reductase M2 subunit phosphorylation at residue serine 20 in canonical Wnt signal transduction.
PubMed ID: 17693683
PubMed ID: 18691976
Title: Kinase-selective enrichment enables quantitative phosphoproteomics of the kinome across the cell cycle.
PubMed ID: 18691976
PubMed ID: 18669648
Title: A quantitative atlas of mitotic phosphorylation.
PubMed ID: 18669648
PubMed ID: 19413330
Title: Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach.
PubMed ID: 19413330
DOI: 10.1021/ac9004309
PubMed ID: 19690332
Title: Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions.
PubMed ID: 19690332
PubMed ID: 19608861
Title: Lysine acetylation targets protein complexes and co-regulates major cellular functions.
PubMed ID: 19608861
PubMed ID: 20068231
Title: Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.
PubMed ID: 20068231
PubMed ID: 21269460
Title: Initial characterization of the human central proteome.
PubMed ID: 21269460
PubMed ID: 21406692
Title: System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation.
PubMed ID: 21406692
PubMed ID: 23186163
Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.
PubMed ID: 23186163
DOI: 10.1021/pr300630k
PubMed ID: 23911928
Title: SIRT6 recruits SNF2H to DNA break sites, preventing genomic instability through chromatin remodeling.
PubMed ID: 23911928
PubMed ID: 24275569
Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.
PubMed ID: 24275569
PubMed ID: 26100909
Title: BEND3 represses rDNA transcription by stabilizing a NoRC component via USP21 deubiquitinase.
PubMed ID: 26100909
PubMed ID: 28801535
Title: Expansion of the ISWI chromatin remodeler family with new active complexes.
PubMed ID: 28801535
PubMed ID: 28112733
Title: Site-specific mapping of the human SUMO proteome reveals co-modification with phosphorylation.
PubMed ID: 28112733
DOI: 10.1038/nsmb.3366
PubMed ID: 30926617
Title: BZLF1 interacts with chromatin remodelers promoting escape from latent infections with EBV.
PubMed ID: 30926617
PubMed ID: 33092197
Title: A Comprehensive Proteomics Analysis of the JC Virus (JCV) Large and Small Tumor Antigen Interacting Proteins: Large T Primarily Targets the Host Protein Complexes with V-ATPase and Ubiquitin Ligase Activities While Small t Mostly Associates with Those Having Phosphatase and Chromatin-Remodeling Functions.
PubMed ID: 33092197
DOI: 10.3390/v12101192
Sequence Information:
- Length: 1052
- Mass: 121905
- Checksum: 6CC8CB25BAF7A876
- Sequence:
MSSAAEPPPP PPPESAPSKP AASIASGGSN SSNKGGPEGV AAQAVASAAS AGPADAEMEE IFDDASPGKQ KEIQEPDPTY EEKMQTDRAN RFEYLLKQTE LFAHFIQPAA QKTPTSPLKM KPGRPRIKKD EKQNLLSVGD YRHRRTEQEE DEELLTESSK ATNVCTRFED SPSYVKWGKL RDYQVRGLNW LISLYENGIN GILADEMGLG KTLQTISLLG YMKHYRNIPG PHMVLVPKST LHNWMSEFKR WVPTLRSVCL IGDKEQRAAF VRDVLLPGEW DVCVTSYEML IKEKSVFKKF NWRYLVIDEA HRIKNEKSKL SEIVREFKTT NRLLLTGTPL QNNLHELWSL LNFLLPDVFN SADDFDSWFD TNNCLGDQKL VERLHMVLRP FLLRRIKADV EKSLPPKKEV KIYVGLSKMQ REWYTRILMK DIDILNSAGK MDKMRLLNIL MQLRKCCNHP YLFDGAEPGP PYTTDMHLVT NSGKMVVLDK LLPKLKEQGS RVLIFSQMTR VLDILEDYCM WRNYEYCRLD GQTPHDERQD SINAYNEPNS TKFVFMLSTR AGGLGINLAT ADVVILYDSD WNPQVDLQAM DRAHRIGQTK TVRVFRFITD NTVEERIVER AEMKLRLDSI VIQQGRLVDQ NLNKIGKDEM LQMIRHGATH VFASKESEIT DEDIDGILER GAKKTAEMNE KLSKMGESSL RNFTMDTESS VYNFEGEDYR EKQKIAFTEW IEPPKRERKA NYAVDAYFRE ALRVSEPKAP KAPRPPKQPN VQDFQFFPPR LFELLEKEIL FYRKTIGYKV PRNPELPNAA QAQKEEQLKI DEAESLNDEE LEEKEKLLTQ GFTNWNKRDF NQFIKANEKW GRDDIENIAR EVEGKTPEEV IEYSAVFWER CNELQDIEKI MAQIERGEAR IQRRISIKKA LDTKIGRYKA PFHQLRISYG TNKGKNYTEE EDRFLICMLH KLGFDKENVY DELRQCIRNS PQFRFDWFLK SRTAMELQRR CNTLITLIER ENMELEEKEK AEKKKRGPKP STQKRKMDGA PDGRGRKKKL KL
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. For the full schema, download it here.