Details for: FEN1
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
Fold Change: 39.5831
Cell Significance Index: -10.0400 - Cell Name: embryonic stem cell (CL0002322)
Fold Change: 34.4947
Cell Significance Index: -14.2100 - Cell Name: mucosal type mast cell (CL0000485)
Fold Change: 28.1841
Cell Significance Index: -11.4500 - Cell Name: basophilic erythroblast (CL0000549)
Fold Change: 18.5329
Cell Significance Index: 8.4400 - Cell Name: ciliated cell of the bronchus (CL0002332)
Fold Change: 12.0451
Cell Significance Index: -11.5000 - Cell Name: orthochromatic erythroblast (CL0000552)
Fold Change: 9.5543
Cell Significance Index: -11.7800 - Cell Name: CD8-alpha-beta-positive, alpha-beta intraepithelial T cell (CL0000796)
Fold Change: 4.6960
Cell Significance Index: -12.5800 - Cell Name: stromal cell of bone marrow (CL0010001)
Fold Change: 3.4870
Cell Significance Index: -13.7600 - Cell Name: neutrophil progenitor cell (CL0000834)
Fold Change: 1.4430
Cell Significance Index: 38.6000 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: 1.2623
Cell Significance Index: 79.5600 - Cell Name: gut absorptive cell (CL0000677)
Fold Change: 1.1802
Cell Significance Index: 70.8500 - Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
Fold Change: 1.1522
Cell Significance Index: 40.0400 - Cell Name: germ cell (CL0000586)
Fold Change: 1.1178
Cell Significance Index: 8.4400 - Cell Name: tonsil germinal center B cell (CL2000006)
Fold Change: 1.0521
Cell Significance Index: 124.0700 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 0.9304
Cell Significance Index: 101.2000 - Cell Name: mesenchymal cell (CL0008019)
Fold Change: 0.9026
Cell Significance Index: 15.1100 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 0.8181
Cell Significance Index: 133.0500 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: 0.4769
Cell Significance Index: 25.0400 - Cell Name: colon endothelial cell (CL1001572)
Fold Change: 0.4651
Cell Significance Index: 0.3600 - Cell Name: transit amplifying cell of colon (CL0009011)
Fold Change: 0.4159
Cell Significance Index: 13.3200 - Cell Name: pro-T cell (CL0000827)
Fold Change: 0.3370
Cell Significance Index: 8.6100 - Cell Name: cell in vitro (CL0001034)
Fold Change: 0.3006
Cell Significance Index: 164.1500 - Cell Name: hair follicular keratinocyte (CL2000092)
Fold Change: 0.2516
Cell Significance Index: 111.2400 - Cell Name: skeletal muscle myoblast (CL0000515)
Fold Change: 0.2277
Cell Significance Index: 2.4800 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 0.2020
Cell Significance Index: 182.3900 - Cell Name: decidual cell (CL2000002)
Fold Change: 0.1733
Cell Significance Index: 2.7800 - Cell Name: epithelial cell of uterus (CL0002149)
Fold Change: 0.1492
Cell Significance Index: 2.0700 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: 0.1349
Cell Significance Index: 7.0100 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: 0.1340
Cell Significance Index: 15.3600 - Cell Name: microfold cell of epithelium of small intestine (CL1000353)
Fold Change: 0.1308
Cell Significance Index: 9.0500 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: 0.1228
Cell Significance Index: 9.1500 - Cell Name: early pro-B cell (CL0002046)
Fold Change: 0.1217
Cell Significance Index: 7.8500 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: 0.1164
Cell Significance Index: 6.5300 - Cell Name: pancreatic PP cell (CL0002275)
Fold Change: 0.1039
Cell Significance Index: 64.9000 - Cell Name: lactocyte (CL0002325)
Fold Change: 0.1034
Cell Significance Index: 13.3600 - Cell Name: enteroendocrine cell of colon (CL0009042)
Fold Change: 0.0987
Cell Significance Index: 18.7900 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: 0.0859
Cell Significance Index: 10.5600 - Cell Name: colon goblet cell (CL0009039)
Fold Change: 0.0817
Cell Significance Index: 8.0800 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: 0.0671
Cell Significance Index: 9.2100 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 0.0667
Cell Significance Index: 13.3800 - Cell Name: sebum secreting cell (CL0000317)
Fold Change: 0.0533
Cell Significance Index: 3.7700 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: 0.0472
Cell Significance Index: 2.2000 - Cell Name: enteroendocrine cell of small intestine (CL0009006)
Fold Change: 0.0357
Cell Significance Index: 0.8900 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: 0.0354
Cell Significance Index: 1.0200 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: 0.0274
Cell Significance Index: 0.7400 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: 0.0267
Cell Significance Index: 4.8200 - Cell Name: paneth cell of epithelium of small intestine (CL1000343)
Fold Change: 0.0240
Cell Significance Index: 0.5200 - Cell Name: cerebellar granule cell (CL0001031)
Fold Change: 0.0165
Cell Significance Index: 0.2800 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 0.0121
Cell Significance Index: 4.3500 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: 0.0100
Cell Significance Index: 0.3500 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: 0.0083
Cell Significance Index: 1.4200 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: 0.0059
Cell Significance Index: 4.3400 - Cell Name: intestinal epithelial cell (CL0002563)
Fold Change: -0.0014
Cell Significance Index: -0.0200 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0048
Cell Significance Index: -2.7400 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: -0.0052
Cell Significance Index: -3.9000 - Cell Name: GABAergic interneuron (CL0011005)
Fold Change: -0.0055
Cell Significance Index: -3.7800 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: -0.0073
Cell Significance Index: -13.6700 - Cell Name: odontoblast (CL0000060)
Fold Change: -0.0098
Cell Significance Index: -1.2600 - Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
Fold Change: -0.0108
Cell Significance Index: -7.9400 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: -0.0142
Cell Significance Index: -19.2700 - Cell Name: fibro/adipogenic progenitor cell (CL0009099)
Fold Change: -0.0152
Cell Significance Index: -0.7700 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: -0.0196
Cell Significance Index: -12.4400 - Cell Name: neuron associated cell (CL0000095)
Fold Change: -0.0222
Cell Significance Index: -0.9100 - Cell Name: CD4-positive, alpha-beta memory T cell, CD45RO-positive (CL0001204)
Fold Change: -0.0230
Cell Significance Index: -0.6800 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.0269
Cell Significance Index: -2.7500 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.0331
Cell Significance Index: -6.9800 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.0336
Cell Significance Index: -9.6700 - Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
Fold Change: -0.0432
Cell Significance Index: -0.9200 - Cell Name: epithelial cell of stomach (CL0002178)
Fold Change: -0.0507
Cell Significance Index: -5.9100 - Cell Name: neoplastic cell (CL0001063)
Fold Change: -0.0645
Cell Significance Index: -12.8000 - Cell Name: granulosa cell (CL0000501)
Fold Change: -0.0696
Cell Significance Index: -1.8300 - Cell Name: pancreatic endocrine cell (CL0008024)
Fold Change: -0.0900
Cell Significance Index: -10.2700 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: -0.0968
Cell Significance Index: -14.0700 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: -0.1228
Cell Significance Index: -5.7700 - Cell Name: basal cell of prostate epithelium (CL0002341)
Fold Change: -0.1245
Cell Significance Index: -3.3900 - Cell Name: neural crest cell (CL0011012)
Fold Change: -0.1529
Cell Significance Index: -1.6600 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: -0.1547
Cell Significance Index: -7.0100 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: -0.1548
Cell Significance Index: -9.5200 - Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
Fold Change: -0.1590
Cell Significance Index: -12.5900 - Cell Name: fibroblast of dermis (CL0002551)
Fold Change: -0.1646
Cell Significance Index: -3.4500 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: -0.1796
Cell Significance Index: -2.4500 - Cell Name: lung endothelial cell (CL1001567)
Fold Change: -0.1814
Cell Significance Index: -9.4500 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: -0.1857
Cell Significance Index: -14.2500 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: -0.2085
Cell Significance Index: -14.0200 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: -0.2229
Cell Significance Index: -13.6700 - Cell Name: fibroblast of mammary gland (CL0002555)
Fold Change: -0.2330
Cell Significance Index: -6.6800 - Cell Name: Sertoli cell (CL0000216)
Fold Change: -0.2331
Cell Significance Index: -3.2700 - Cell Name: helper T cell (CL0000912)
Fold Change: -0.2340
Cell Significance Index: -3.3300 - Cell Name: kidney epithelial cell (CL0002518)
Fold Change: -0.2438
Cell Significance Index: -7.1800 - Cell Name: retinal rod cell (CL0000604)
Fold Change: -0.2567
Cell Significance Index: -3.0600 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: -0.3165
Cell Significance Index: -14.0000 - Cell Name: primitive red blood cell (CL0002355)
Fold Change: -0.3472
Cell Significance Index: -3.9300 - Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
Fold Change: -0.3503
Cell Significance Index: -12.2700 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
Fold Change: -0.3537
Cell Significance Index: -11.5800 - Cell Name: stratified epithelial cell (CL0000079)
Fold Change: -0.3558
Cell Significance Index: -13.0600 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: -0.3580
Cell Significance Index: -9.5600 - Cell Name: direct pathway medium spiny neuron (CL4023026)
Fold Change: -0.3694
Cell Significance Index: -13.9900 - Cell Name: BEST4+ enteroycte (CL4030026)
Fold Change: -0.3723
Cell Significance Index: -5.6100 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: -0.3842
Cell Significance Index: -12.2400 - Cell Name: paneth cell of colon (CL0009009)
Fold Change: -0.3891
Cell Significance Index: -5.8300
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 1186168352
Symbol: FEN1_HUMAN
Name: DNase IV
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 8007985
Title: Structural and functional conservation of the human homolog of the Schizosaccharomyces pombe rad2 gene, which is required for chromosome segregation and recovery from DNA damage.
PubMed ID: 8007985
PubMed ID: 7774922
Title: Sequence of human FEN-1, a structure-specific endonuclease, and chromosomal localization of the gene (FEN1) in mouse and human.
PubMed ID: 7774922
PubMed ID: 16554811
Title: Human chromosome 11 DNA sequence and analysis including novel gene identification.
PubMed ID: 16554811
DOI: 10.1038/nature04632
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 7961795
Title: Structural and functional homology between mammalian DNase IV and the 5'-nuclease domain of Escherichia coli DNA polymerase I.
PubMed ID: 7961795
PubMed ID: 8621570
Title: Essential amino acids for substrate binding and catalysis of human flap endonuclease 1.
PubMed ID: 8621570
PubMed ID: 9305916
Title: The DNA repair endonuclease XPG binds to proliferating cell nuclear antigen (PCNA) and shares sequence elements with the PCNA-binding regions of FEN-1 and cyclin-dependent kinase inhibitor p21.
PubMed ID: 9305916
PubMed ID: 10744741
Title: Mechanism whereby proliferating cell nuclear antigen stimulates flap endonuclease 1.
PubMed ID: 10744741
PubMed ID: 11430825
Title: Regulation of human flap endonuclease-1 activity by acetylation through the transcriptional coactivator p300.
PubMed ID: 11430825
PubMed ID: 11986308
Title: Arginine residues 47 and 70 of human flap endonuclease-1 are involved in DNA substrate interactions and cleavage site determination.
PubMed ID: 11986308
PubMed ID: 18499658
Title: Studies with the human cohesin establishment factor, ChlR1. Association of ChlR1 with Ctf18-RFC and Fen1.
PubMed ID: 18499658
PubMed ID: 18443037
Title: Nucleolar localization and dynamic roles of flap endonuclease 1 in ribosomal DNA replication and damage repair.
PubMed ID: 18443037
DOI: 10.1128/mcb.00200-08
PubMed ID: 19336415
Title: Human DNA polymerase beta polymorphism, Arg137Gln, impairs its polymerase activity and interaction with PCNA and the cellular base excision repair capacity.
PubMed ID: 19336415
DOI: 10.1093/nar/gkp201
PubMed ID: 19608861
Title: Lysine acetylation targets protein complexes and co-regulates major cellular functions.
PubMed ID: 19608861
PubMed ID: 20729856
Title: Methylation of FEN1 suppresses nearby phosphorylation and facilitates PCNA binding.
PubMed ID: 20729856
DOI: 10.1038/nchembio.422
PubMed ID: 20068231
Title: Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.
PubMed ID: 20068231
PubMed ID: 21269460
Title: Initial characterization of the human central proteome.
PubMed ID: 21269460
PubMed ID: 22814378
Title: N-terminal acetylome analyses and functional insights of the N-terminal acetyltransferase NatB.
PubMed ID: 22814378
PubMed ID: 23186163
Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.
PubMed ID: 23186163
DOI: 10.1021/pr300630k
PubMed ID: 23675412
Title: A cryptic targeting signal creates a mitochondrial FEN1 isoform with tailed R-loop binding properties.
PubMed ID: 23675412
PubMed ID: 24275569
Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.
PubMed ID: 24275569
PubMed ID: 26760506
Title: R152C DNA Pol beta mutation impairs base excision repair and induces cellular transformation.
PubMed ID: 26760506
PubMed ID: 26751069
Title: Wuho is a new member in maintaining genome stability through its interaction with flap endonuclease 1.
PubMed ID: 26751069
PubMed ID: 15576034
Title: Structural and thermodynamic analysis of human PCNA with peptides derived from DNA polymerase-delta p66 subunit and flap endonuclease-1.
PubMed ID: 15576034
PubMed ID: 15616578
Title: Structural basis for recruitment of human flap endonuclease 1 to PCNA.
PubMed ID: 15616578
Sequence Information:
- Length: 380
- Mass: 42593
- Checksum: 5154F2F6E57592C5
- Sequence:
MGIQGLAKLI ADVAPSAIRE NDIKSYFGRK VAIDASMSIY QFLIAVRQGG DVLQNEEGET TSHLMGMFYR TIRMMENGIK PVYVFDGKPP QLKSGELAKR SERRAEAEKQ LQQAQAAGAE QEVEKFTKRL VKVTKQHNDE CKHLLSLMGI PYLDAPSEAE ASCAALVKAG KVYAAATEDM DCLTFGSPVL MRHLTASEAK KLPIQEFHLS RILQELGLNQ EQFVDLCILL GSDYCESIRG IGPKRAVDLI QKHKSIEEIV RRLDPNKYPV PENWLHKEAH QLFLEPEVLD PESVELKWSE PNEEELIKFM CGEKQFSEER IRSGVKRLSK SRQGSTQGRL DDFFKVTGSL SSAKRKEPEP KGSTKKKAKT GAAGKFKRGK
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.