Details for: LBR
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
Fold Change: 126.8316
Cell Significance Index: -32.1700 - Cell Name: mucosal type mast cell (CL0000485)
Fold Change: 92.0722
Cell Significance Index: -37.4100 - Cell Name: smooth muscle fiber of ileum (CL1000278)
Fold Change: 87.7208
Cell Significance Index: -41.4200 - Cell Name: peripheral blood mononuclear cell (CL2000001)
Fold Change: 82.5257
Cell Significance Index: -42.4500 - Cell Name: polychromatophilic erythroblast (CL0000550)
Fold Change: 59.8540
Cell Significance Index: -9.3100 - Cell Name: ciliated cell of the bronchus (CL0002332)
Fold Change: 39.5840
Cell Significance Index: -37.7900 - Cell Name: orthochromatic erythroblast (CL0000552)
Fold Change: 28.9386
Cell Significance Index: -35.6800 - Cell Name: CD8-alpha-beta-positive, alpha-beta intraepithelial T cell (CL0000796)
Fold Change: 13.6084
Cell Significance Index: -36.4600 - Cell Name: stromal cell of bone marrow (CL0010001)
Fold Change: 9.9619
Cell Significance Index: -39.3100 - Cell Name: CD8-positive, alpha-beta regulatory T cell (CL0000795)
Fold Change: 8.8167
Cell Significance Index: -27.0800 - Cell Name: epidermal Langerhans cell (CL0002457)
Fold Change: 6.8537
Cell Significance Index: -15.0000 - Cell Name: tonsil germinal center B cell (CL2000006)
Fold Change: 2.5111
Cell Significance Index: 296.1400 - Cell Name: microfold cell of epithelium of small intestine (CL1000353)
Fold Change: 2.4676
Cell Significance Index: 170.6500 - Cell Name: lung endothelial cell (CL1001567)
Fold Change: 1.6514
Cell Significance Index: 86.0200 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 1.5539
Cell Significance Index: 1403.0200 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 1.2226
Cell Significance Index: 242.6300 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: 1.0234
Cell Significance Index: 29.4900 - Cell Name: CD4-positive, alpha-beta memory T cell, CD45RO-positive (CL0001204)
Fold Change: 0.9986
Cell Significance Index: 29.3300 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: 0.9821
Cell Significance Index: 55.1100 - Cell Name: early pro-B cell (CL0002046)
Fold Change: 0.8270
Cell Significance Index: 53.3600 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: 0.7364
Cell Significance Index: 132.7500 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: 0.7004
Cell Significance Index: 86.1300 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: 0.6145
Cell Significance Index: 37.7700 - Cell Name: cell in vitro (CL0001034)
Fold Change: 0.6003
Cell Significance Index: 327.8400 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 0.5132
Cell Significance Index: 55.8200 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: 0.5029
Cell Significance Index: 69.0600 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: 0.4965
Cell Significance Index: 22.5100 - Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
Fold Change: 0.4935
Cell Significance Index: 17.1500 - Cell Name: paneth cell of epithelium of small intestine (CL1000343)
Fold Change: 0.4930
Cell Significance Index: 10.6800 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 0.4709
Cell Significance Index: 76.6000 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 0.3644
Cell Significance Index: 130.7200 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 0.3512
Cell Significance Index: 70.4500 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: 0.3049
Cell Significance Index: 8.5200 - Cell Name: hair follicular keratinocyte (CL2000092)
Fold Change: 0.2365
Cell Significance Index: 104.5800 - Cell Name: Hofbauer cell (CL3000001)
Fold Change: 0.2023
Cell Significance Index: 1.6500 - Cell Name: GABAergic interneuron (CL0011005)
Fold Change: 0.1884
Cell Significance Index: 130.3000 - Cell Name: enteroendocrine cell of colon (CL0009042)
Fold Change: 0.1659
Cell Significance Index: 31.5700 - Cell Name: fibroblast of dermis (CL0002551)
Fold Change: 0.1428
Cell Significance Index: 2.9900 - Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
Fold Change: 0.1277
Cell Significance Index: 2.7200 - Cell Name: basal cell of prostate epithelium (CL0002341)
Fold Change: 0.1091
Cell Significance Index: 2.9700 - Cell Name: CD14-positive, CD16-negative classical monocyte (CL0002057)
Fold Change: 0.0663
Cell Significance Index: 1.2300 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: 0.0649
Cell Significance Index: 11.0800 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: 0.0519
Cell Significance Index: 1.8300 - Cell Name: colon goblet cell (CL0009039)
Fold Change: 0.0512
Cell Significance Index: 5.0600 - Cell Name: odontoblast (CL0000060)
Fold Change: 0.0486
Cell Significance Index: 6.2300 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: 0.0066
Cell Significance Index: 12.4500 - Cell Name: mesenchymal cell (CL0008019)
Fold Change: -0.0048
Cell Significance Index: -0.0800 - Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
Fold Change: -0.0156
Cell Significance Index: -11.4600 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: -0.0170
Cell Significance Index: -26.1200 - Cell Name: anterior lens cell (CL0002223)
Fold Change: -0.0174
Cell Significance Index: -32.1800 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0200
Cell Significance Index: -14.8000 - Cell Name: microcirculation associated smooth muscle cell (CL0008035)
Fold Change: -0.0262
Cell Significance Index: -0.2200 - Cell Name: pancreatic PP cell (CL0002275)
Fold Change: -0.0268
Cell Significance Index: -16.7500 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: -0.0276
Cell Significance Index: -37.4900 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: -0.0295
Cell Significance Index: -18.7100 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: -0.0340
Cell Significance Index: -25.7700 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: -0.0414
Cell Significance Index: -18.8000 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0506
Cell Significance Index: -28.5200 - Cell Name: sebum secreting cell (CL0000317)
Fold Change: -0.0543
Cell Significance Index: -3.8400 - Cell Name: transit amplifying cell of colon (CL0009011)
Fold Change: -0.0612
Cell Significance Index: -1.9600 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: -0.0828
Cell Significance Index: -4.3000 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.1015
Cell Significance Index: -21.3700 - Cell Name: centrilobular region hepatocyte (CL0019029)
Fold Change: -0.1030
Cell Significance Index: -1.7400 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.1142
Cell Significance Index: -32.8700 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: -0.1146
Cell Significance Index: -3.0600 - Cell Name: epithelial cell of stomach (CL0002178)
Fold Change: -0.1173
Cell Significance Index: -13.6700 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: -0.1217
Cell Significance Index: -5.7200 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.1224
Cell Significance Index: -14.0200 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.1408
Cell Significance Index: -14.3800 - Cell Name: fibroblast of mammary gland (CL0002555)
Fold Change: -0.1612
Cell Significance Index: -4.6200 - Cell Name: lactocyte (CL0002325)
Fold Change: -0.1742
Cell Significance Index: -22.5100 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: -0.2127
Cell Significance Index: -14.3000 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: -0.2242
Cell Significance Index: -32.5900 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: -0.2499
Cell Significance Index: -11.6500 - Cell Name: endothelial cell of placenta (CL0009092)
Fold Change: -0.2532
Cell Significance Index: -1.5300 - Cell Name: pancreatic endocrine cell (CL0008024)
Fold Change: -0.2670
Cell Significance Index: -30.4800 - Cell Name: neutrophil progenitor cell (CL0000834)
Fold Change: -0.2710
Cell Significance Index: -7.2500 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: -0.2750
Cell Significance Index: -28.6300 - Cell Name: cortical interneuron (CL0008031)
Fold Change: -0.2777
Cell Significance Index: -6.6600 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: -0.3127
Cell Significance Index: -24.0000 - Cell Name: tuft cell of small intestine (CL0009080)
Fold Change: -0.3351
Cell Significance Index: -3.3800 - Cell Name: pro-T cell (CL0000827)
Fold Change: -0.3437
Cell Significance Index: -8.7800 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: -0.3540
Cell Significance Index: -26.3800 - Cell Name: enteroendocrine cell of small intestine (CL0009006)
Fold Change: -0.3592
Cell Significance Index: -8.9800 - Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
Fold Change: -0.5018
Cell Significance Index: -39.7400 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: -0.5126
Cell Significance Index: -32.3100 - Cell Name: gut absorptive cell (CL0000677)
Fold Change: -0.5553
Cell Significance Index: -33.3400 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: -0.5751
Cell Significance Index: -35.2600 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: -0.6100
Cell Significance Index: -26.9800 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: -0.6291
Cell Significance Index: -33.0300 - Cell Name: direct pathway medium spiny neuron (CL4023026)
Fold Change: -0.7088
Cell Significance Index: -26.8400 - Cell Name: cardiac endothelial cell (CL0010008)
Fold Change: -0.7148
Cell Significance Index: -10.2800 - Cell Name: periportal region hepatocyte (CL0019026)
Fold Change: -0.7398
Cell Significance Index: -10.9200 - Cell Name: skeletal muscle myoblast (CL0000515)
Fold Change: -0.7478
Cell Significance Index: -8.1300 - Cell Name: granulosa cell (CL0000501)
Fold Change: -0.7682
Cell Significance Index: -20.2000 - Cell Name: transit amplifying cell of small intestine (CL0009012)
Fold Change: -0.8446
Cell Significance Index: -17.5200 - Cell Name: kidney epithelial cell (CL0002518)
Fold Change: -0.8756
Cell Significance Index: -25.7900 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
Fold Change: -0.8794
Cell Significance Index: -28.7900 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: -0.8936
Cell Significance Index: -28.4600 - Cell Name: Purkinje cell (CL0000121)
Fold Change: -0.8999
Cell Significance Index: -19.7100
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 79681096
Symbol: LBR_HUMAN
Name: Delta(14)-sterol reductase LBR
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 8157662
Title: Primary structure analysis and lamin B and DNA binding of human LBR, an integral protein of the nuclear envelope inner membrane.
PubMed ID: 8157662
PubMed ID: 8157663
Title: Characterization of the human gene encoding LBR, an integral protein of the nuclear envelope inner membrane.
PubMed ID: 8157663
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 9169472
Title: Domain-specific interactions of human HP1-type chromodomain proteins and inner nuclear membrane protein LBR.
PubMed ID: 9169472
PubMed ID: 9630650
Title: Human lamin B receptor exhibits sterol C14-reductase activity in Saccharomyces cerevisiae.
PubMed ID: 9630650
PubMed ID: 10049757
Title: SRPK1 and LBR protein kinases show identical substrate specificities.
PubMed ID: 10049757
PubMed ID: 10828963
Title: Inner nuclear membrane protein LBR preferentially interacts with DNA secondary structures and nucleosomal linker.
PubMed ID: 10828963
DOI: 10.1021/bi992908b
PubMed ID: 12118250
Title: Mutations in the gene encoding the lamin B receptor produce an altered nuclear morphology in granulocytes (Pelger-Huet anomaly).
PubMed ID: 12118250
DOI: 10.1038/ng925
PubMed ID: 12618959
Title: Autosomal recessive HEM/Greenberg skeletal dysplasia is caused by 3 beta-hydroxysterol delta 14-reductase deficiency due to mutations in the lamin B receptor gene.
PubMed ID: 12618959
DOI: 10.1086/373938
PubMed ID: 15882967
Title: The mammalian heterochromatin protein 1 binds diverse nuclear proteins through a common motif that targets the chromoshadow domain.
PubMed ID: 15882967
PubMed ID: 16784888
Title: Sterol dependent regulation of human TM7SF2 gene expression: role of the encoded 3beta-hydroxysterol Delta14-reductase in human cholesterol biosynthesis.
PubMed ID: 16784888
PubMed ID: 17081983
Title: Global, in vivo, and site-specific phosphorylation dynamics in signaling networks.
PubMed ID: 17081983
PubMed ID: 18669648
Title: A quantitative atlas of mitotic phosphorylation.
PubMed ID: 18669648
PubMed ID: 19608861
Title: Lysine acetylation targets protein complexes and co-regulates major cellular functions.
PubMed ID: 19608861
PubMed ID: 20068231
Title: Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.
PubMed ID: 20068231
PubMed ID: 21269460
Title: Initial characterization of the human central proteome.
PubMed ID: 21269460
PubMed ID: 21795390
Title: Temporal control of nuclear envelope assembly by phosphorylation of lamin B receptor.
PubMed ID: 21795390
PubMed ID: 21406692
Title: System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation.
PubMed ID: 21406692
PubMed ID: 23186163
Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.
PubMed ID: 23186163
DOI: 10.1021/pr300630k
PubMed ID: 24275569
Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.
PubMed ID: 24275569
PubMed ID: 26009488
Title: Clnk plays a role in TNF-alpha-induced cell death in murine fibrosarcoma cell line L929.
PubMed ID: 26009488
PubMed ID: 25944712
Title: N-terminome analysis of the human mitochondrial proteome.
PubMed ID: 25944712
PubMed ID: 32694168
Title: TMEM147 interacts with lamin B receptor, regulates its localization and levels, and affects cholesterol homeostasis.
PubMed ID: 32694168
DOI: 10.1242/jcs.245357
PubMed ID: 14617022
Title: Lamin B-receptor mutations in Pelger-Huet anomaly.
PubMed ID: 14617022
PubMed ID: 20522425
Title: LBR mutation and nuclear envelope defects in a patient affected with Reynolds syndrome.
PubMed ID: 20522425
PubMed ID: 21327084
Title: Mutations causing Greenberg dysplasia but not Pelger anomaly uncouple enzymatic from structural functions of a nuclear membrane protein.
PubMed ID: 21327084
PubMed ID: 23824842
Title: Pelger-huet anomaly and a mild skeletal phenotype secondary to mutations in LBR.
PubMed ID: 23824842
DOI: 10.1002/ajmg.a.36019
PubMed ID: 25348816
Title: An anadysplasia-like, spontaneously remitting spondylometaphyseal dysplasia secondary to lamin B receptor (LBR) gene mutations: further definition of the phenotypic heterogeneity of LBR-bone dysplasias.
PubMed ID: 25348816
DOI: 10.1002/ajmg.a.36808
PubMed ID: 27336722
Title: The Lamin B receptor is essential for cholesterol synthesis and perturbed by disease-causing mutations.
PubMed ID: 27336722
DOI: 10.7554/elife.16011
Sequence Information:
- Length: 615
- Mass: 70703
- Checksum: 5A7388776F43C66D
- Sequence:
MPSRKFADGE VVRGRWPGSS LYYEVEILSH DSTSQLYTVK YKDGTELELK ENDIKPLTSF RQRKGGSTSS SPSRRRGSRS RSRSRSPGRP PKSARRSASA SHQADIKEAR REVEVKLTPL ILKPFGNSIS RYNGEPEHIE RNDAPHKNTQ EKFSLSQESS YIATQYSLRP RREEVKLKEI DSKEEKYVAK ELAVRTFEVT PIRAKDLEFG GVPGVFLIMF GLPVFLFLLL LMCKQKDPSL LNFPPPLPAL YELWETRVFG VYLLWFLIQV LFYLLPIGKV VEGTPLIDGR RLKYRLNGFY AFILTSAVIG TSLFQGVEFH YVYSHFLQFA LAATVFCVVL SVYLYMRSLK APRNDLSPAS SGNAVYDFFI GRELNPRIGT FDLKYFCELR PGLIGWVVIN LVMLLAEMKI QDRAVPSLAM ILVNSFQLLY VVDALWNEEA LLTTMDIIHD GFGFMLAFGD LVWVPFIYSF QAFYLVSHPN EVSWPMASLI IVLKLCGYVI FRGANSQKNA FRKNPSDPKL AHLKTIHTST GKNLLVSGWW GFVRHPNYLG DLIMALAWSL PCGFNHILPY FYIIYFTMLL VHREARDEYH CKKKYGVAWE KYCQRVPYRI FPYIY
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.