Details for: NBL1

Gene ID: 4681

Gene Type:  Protein-coding  - A gene that serves as a template for producing a messenger RNA (mRNA) molecule, which is then translated into a functional protein.

Symbol: NBL1

Ensembl ID: ENSG00000158747

Description: NBL1, DAN family BMP antagonist

Cell Significance Landscape

Associated with

Significant Cells

Cell Significance Index (CSI) scores for the chosen context(s)

  • bronchus fibroblast of lung CL2000093
    CSI 57.93
    rCSI 47.07%
    PRS 85.25
  • alveolar type 1 fibroblast cell CL4028004
    CSI 40.72
    rCSI 44.6%
    PRS 87.47
  • fibroblast of lung CL0002553
    CSI 33.62
    rCSI 31.29%
    PRS 86.76
  • respiratory basal cell CL0002633
    CSI 29.23
    rCSI 30.27%
    PRS 88.58
  • transit amplifying cell of colon CL0009011
    CSI 28.77
    rCSI 33.79%
    PRS 86.72
  • conventional dendritic cell CL0000990
    CSI 26.12
    rCSI 21.81%
    PRS 82.9
  • alveolar adventitial fibroblast CL4028006
    CSI 21.34
    rCSI 33.7%
    PRS 86.92
  • CD4-positive helper T cell CL0000492
    CSI 18.07
    rCSI 13.67%
    PRS 95.01
  • enterocyte CL0000584
    CSI 17.37
    rCSI 28.01%
    PRS 83.52
  • colon epithelial cell CL0011108
    CSI 17.11
    rCSI 17.92%
    PRS 83.27
  • colon goblet cell CL0009039
    CSI 16.99
    rCSI 40.39%
    PRS 88.97
  • stromal cell of ovary CL0002132
    CSI 16.59
    rCSI 45.59%
    PRS 90.2
  • M cell of gut CL0000682
    CSI 16.2
    rCSI 17.21%
    PRS 89.02
  • skin fibroblast CL0002620
    CSI 15.91
    rCSI 13.71%
    PRS 85.48
  • myofibroblast cell CL0000186
    CSI 14.89
    rCSI 20.62%
    PRS 82.23
  • blood vessel endothelial cell CL0000071
    CSI 14.49
    rCSI 30.06%
    PRS 83.25
  • colonocyte CL1000347
    CSI 14.07
    rCSI 20.17%
    PRS 85.08
  • regulatory T cell CL0000815
    CSI 13.58
    rCSI 15.74%
    PRS 83.15
  • ciliated cell CL0000064
    CSI 13.22
    rCSI 21.41%
    PRS 80.49
  • interstitial cell of Cajal CL0002088
    CSI 12.72
    rCSI 16.19%
    PRS 90
  • microcirculation associated smooth muscle cell CL0008035
    CSI 11.03
    rCSI 31.93%
    PRS 84.96
  • stem cell CL0000034
    CSI 10.95
    rCSI 10.56%
    PRS 80.66
  • vascular leptomeningeal cell CL4023051
    CSI 10.31
    rCSI 18.08%
    PRS 80.92
  • BEST4+ enteroycte CL4030026
    CSI 9.89
    rCSI 12.3%
    PRS 86.08
  • enteric smooth muscle cell CL0002504
    CSI 9.45
    rCSI 13.49%
    PRS 86.3
  • T-helper 17 cell CL0000899
    CSI 9.33
    rCSI 7.41%
    PRS 97.17
  • secretory cell CL0000151
    CSI 9.25
    rCSI 9.65%
    PRS 84.93
  • goblet cell CL0000160
    CSI 9.13
    rCSI 8.63%
    PRS 83.81
  • perivascular cell CL4033054
    CSI 9.12
    rCSI 12.46%
    PRS 89.6
  • pancreatic stellate cell CL0002410
    CSI 8.66
    rCSI 50.38%
    PRS 88.16
  • pancreatic A cell CL0000171
    CSI 8.64
    rCSI 9.06%
    PRS 88.43
  • sncg GABAergic cortical interneuron CL4023015
    CSI 7.88
    rCSI 12.68%
    PRS 71.37
  • adventitial cell CL0002503
    CSI 7.84
    rCSI 18.73%
    PRS 88.65
  • CD8-positive, alpha-beta memory T cell, CD45RO-positive CL0001203
    CSI 7.42
    rCSI 8.99%
    PRS 66.18
  • smooth muscle cell CL0000192
    CSI 6.91
    rCSI 16.47%
    PRS 81.11
  • intestine goblet cell CL0019031
    CSI 6.76
    rCSI 6%
    PRS 83.3
  • sst GABAergic cortical interneuron CL4023017
    CSI 6.65
    rCSI 8.57%
    PRS 71.15
  • vascular associated smooth muscle cell CL0000359
    CSI 6.5
    rCSI 21.09%
    PRS 83.84
  • epithelial cell CL0000066
    CSI 6.4
    rCSI 9.83%
    PRS 74.5
  • respiratory suprabasal cell CL4033048
    CSI 6.28
    rCSI 8.06%
    PRS 88.3
  • transit amplifying cell CL0009010
    CSI 6.16
    rCSI 9.43%
    PRS 91.02
  • innate lymphoid cell CL0001065
    CSI 6.13
    rCSI 12.66%
    PRS 81.25
  • transit amplifying cell of small intestine CL0009012
    CSI 6
    rCSI 26.33%
    PRS 91.01
  • stromal cell CL0000499
    CSI 5.96
    rCSI 16.78%
    PRS 81.15
  • multi-ciliated epithelial cell CL0005012
    CSI 5.79
    rCSI 5.78%
    PRS 80.03
  • retinal bipolar neuron CL0000748
    CSI 5.73
    rCSI 10.73%
    PRS 75.73
  • ciliated columnar cell of tracheobronchial tree CL0002145
    CSI 5.71
    rCSI 13.01%
    PRS 79.09
  • retinal blood vessel endothelial cell CL0002585
    CSI 5.55
    rCSI 8.87%
    PRS 89.02
  • lung pericyte CL0009089
    CSI 5.46
    rCSI 14.41%
    PRS 90.84
  • melanocyte CL0000148
    CSI 5.39
    rCSI 3.99%
    PRS 80.67
  • conjunctival epithelial cell CL1000432
    CSI 5.27
    rCSI 8.06%
    PRS 85.59
  • CD8-positive, alpha-beta memory T cell CL0000909
    CSI 5.25
    rCSI 5.49%
    PRS 94.33
  • respiratory hillock cell CL4030023
    CSI 5.23
    rCSI 9.33%
    PRS 91.53
  • peripheral nervous system neuron CL2000032
    CSI 5.11
    rCSI 6.97%
    PRS 78.41
  • mononuclear phagocyte CL0000113
    CSI 5.1
    rCSI 11.23%
    PRS 88.76
  • pancreatic PP cell CL0002275
    CSI 5.09
    rCSI 20.27%
    PRS 90.73
  • fallopian tube secretory epithelial cell CL4030006
    CSI 5.03
    rCSI 4.84%
    PRS 84.9
  • ON-bipolar cell CL0000749
    CSI 4.94
    rCSI 7.35%
    PRS 85.24
  • Hofbauer cell CL3000001
    CSI 4.71
    rCSI 8.89%
    PRS 91.99
  • group 3 innate lymphoid cell CL0001071
    CSI 4.69
    rCSI 3.52%
    PRS 90.31
  • enteroendocrine cell CL0000164
    CSI 4.45
    rCSI 6.08%
    PRS 84.79
  • intestinal crypt stem cell of colon CL0009043
    CSI 4.41
    rCSI 33.1%
    PRS 92.39
  • hematopoietic stem cell CL0000037
    CSI 4.27
    rCSI 2.84%
    PRS 87.69
  • cerebral cortex neuron CL0010012
    CSI 4.25
    rCSI 17.3%
    PRS 77.89
  • tracheobronchial smooth muscle cell CL0019019
    CSI 4.21
    rCSI 7.43%
    PRS 89.51
  • basal cell of prostate epithelium CL0002341
    CSI 4.18
    rCSI 12.08%
    PRS 90.06
  • ciliated epithelial cell CL0000067
    CSI 4.12
    rCSI 3.63%
    PRS 76.08
  • pvalb GABAergic cortical interneuron CL4023018
    CSI 4.03
    rCSI 5.02%
    PRS 67.87
  • inhibitory interneuron CL0000498
    CSI 3.87
    rCSI 8.92%
    PRS 75.15
  • cardiac endothelial cell CL0010008
    CSI 3.83
    rCSI 15.45%
    PRS 86.26
  • helper T cell CL0000912
    CSI 3.68
    rCSI 5.21%
    PRS 83.03
  • luminal cell of prostate epithelium CL0002340
    CSI 3.64
    rCSI 19.57%
    PRS 91.52
  • squamous epithelial cell CL0000076
    CSI 3.54
    rCSI 8.41%
    PRS 84.49
  • cytotoxic T cell CL0000910
    CSI 3.42
    rCSI 19.61%
    PRS 86.97
  • pancreatic D cell CL0000173
    CSI 3.35
    rCSI 3.29%
    PRS 87.67
  • intestinal epithelial cell CL0002563
    CSI 3.34
    rCSI 3.49%
    PRS 83.22
  • intestinal crypt stem cell of small intestine CL0009017
    CSI 3.26
    rCSI 8.79%
    PRS 88.91
  • keratinocyte CL0000312
    CSI 3.26
    rCSI 2.73%
    PRS 87.55
  • mesodermal cell CL0000222
    CSI 3.08
    rCSI 3.69%
    PRS 84.03
  • ionocyte CL0005006
    CSI 2.95
    rCSI 3.16%
    PRS 87.72
  • VIP GABAergic cortical interneuron CL4023016
    CSI 2.9
    rCSI 3.46%
    PRS 70.14
  • myeloid leukocyte CL0000766
    CSI 2.88
    rCSI 2.66%
    PRS 86.96
  • chondrocyte CL0000138
    CSI 2.85
    rCSI 4.53%
    PRS 79.88
  • choroid plexus epithelial cell CL0000706
    CSI 2.81
    rCSI 4.61%
    PRS 76.91
  • fibroblast of breast CL4006000
    CSI 2.8
    rCSI 11.79%
    PRS 88.84
  • mesenchymal cell CL0008019
    CSI 2.75
    rCSI 6.99%
    PRS 79.7
  • tendon cell CL0000388
    CSI 2.73
    rCSI 7.08%
    PRS 90.31
  • retina horizontal cell CL0000745
    CSI 2.66
    rCSI 4.06%
    PRS 82.86
  • mucous neck cell CL0000651
    CSI 2.48
    rCSI 3.58%
    PRS 90.21
  • OFF-bipolar cell CL0000750
    CSI 2.36
    rCSI 3.22%
    PRS 86.08
  • foveolar cell of stomach CL0002179
    CSI 2.32
    rCSI 4.95%
    PRS 89.56
  • dopaminergic neuron CL0000700
    CSI 2.32
    rCSI 13.13%
    PRS 73.4
  • basal cell of epidermis CL0002187
    CSI 2.29
    rCSI 4.05%
    PRS 55.41
  • duct epithelial cell CL0000068
    CSI 2.24
    rCSI 3.28%
    PRS 89.83
  • enterocyte of epithelium of small intestine CL1000334
    CSI 2.13
    rCSI 32.98%
    PRS 90.64
  • pancreatic ductal cell CL0002079
    CSI 2.08
    rCSI 4.05%
    PRS 88.31
  • ependymal cell CL0000065
    CSI 2.06
    rCSI 4.19%
    PRS 66.18
  • bronchiolar smooth muscle cell CL4033017
    CSI 1.99
    rCSI 29.9%
    PRS 91.63
  • caudal ganglionic eminence derived cortical interneuron CL4023064
    CSI 1.94
    rCSI 3.43%
    PRS 69.55
  • lung ciliated cell CL1000271
    CSI 1.92
    rCSI 2.22%
    PRS 79.26
  • hair follicular keratinocyte CL2000092
    CSI 0.3
    rCSI 5.6%
    PRS 91.6%
  • prostate gland microvascular endothelial cell CL2000059
    CSI 0.4
    rCSI 8.8%
    PRS 91.3%
  • epithelial cell of esophagus CL0002252
    CSI 0.4
    rCSI 4.2%
    PRS 87.4%
  • podocyte CL0000653
    CSI 0.5
    rCSI 2.3%
    PRS 86.5%
  • blood vessel smooth muscle cell CL0019018
    CSI 0.6
    rCSI 4.5%
    PRS 81.4%
  • kidney interstitial cell CL1000500
    CSI 0.6
    rCSI 9.6%
    PRS 88.1%
  • epithelial cell of urethra CL1000296
    CSI 0.7
    rCSI 16.9%
    PRS 90.4%
  • bronchial goblet cell CL1000312
    CSI 0.9
    rCSI 3.6%
    PRS 90.6%
  • keratocyte CL0002363
    CSI 1.2
    rCSI 2.8%
    PRS 87.6%
  • vein endothelial cell of respiratory system CL4033008
    CSI 1.2
    rCSI 8.5%
    PRS 90.2%
  • type L enteroendocrine cell CL0002279
    CSI 1.2
    rCSI 2.3%
    PRS 89.5%
  • endothelial cell of uterus CL0009095
    CSI 1.3
    rCSI 9.5%
    PRS 91.4%
  • smooth muscle cell of prostate CL1000487
    CSI 1.3
    rCSI 7.9%
    PRS 89.7%
  • endocardial cell CL0002350
    CSI 1.4
    rCSI 6.7%
    PRS 81.9%
  • enteroendocrine cell of colon CL0009042
    CSI 1.5
    rCSI 7.0%
    PRS 90.3%
  • deuterosomal cell CL4033044
    CSI 1.5
    rCSI 5.0%
    PRS 81.7%
  • mammary gland epithelial cell CL0002327
    CSI 1.5
    rCSI 5.3%
    PRS 91.4%
  • enterocyte of epithelium of large intestine CL0002071
    CSI 1.5
    rCSI 8.1%
    PRS 89.0%
  • club cell CL0000158
    CSI 1.6
    rCSI 2.3%
    PRS 80.8%
  • small intestine goblet cell CL1000495
    CSI 1.7
    rCSI 3.6%
    PRS 89.5%
  • paneth cell of colon CL0009009
    CSI 1.7
    rCSI 16.8%
    PRS 91.1%
  • T-helper 1 cell CL0000545
    CSI 1.8
    rCSI 3.2%
    PRS 95.8%
  • paneth cell of epithelium of small intestine CL1000343
    CSI 1.9
    rCSI 5.3%
    PRS 90.4%
  • lung ciliated cell CL1000271
    CSI 1.9
    rCSI 2.2%
    PRS 79.3%
  • caudal ganglionic eminence derived cortical interneuron CL4023064
    CSI 1.9
    rCSI 3.4%
    PRS 69.6%
  • bronchiolar smooth muscle cell CL4033017
    CSI 2.0
    rCSI 29.9%
    PRS 91.6%
  • ependymal cell CL0000065
    CSI 2.1
    rCSI 4.2%
    PRS 66.2%
  • pancreatic ductal cell CL0002079
    CSI 2.1
    rCSI 4.1%
    PRS 88.3%
  • enterocyte of epithelium of small intestine CL1000334
    CSI 2.1
    rCSI 33.0%
    PRS 90.6%
  • duct epithelial cell CL0000068
    CSI 2.2
    rCSI 3.3%
    PRS 89.8%
  • basal cell of epidermis CL0002187
    CSI 2.3
    rCSI 4.1%
    PRS 55.4%
  • dopaminergic neuron CL0000700
    CSI 2.3
    rCSI 13.1%
    PRS 73.4%
  • foveolar cell of stomach CL0002179
    CSI 2.3
    rCSI 5.0%
    PRS 89.6%
  • OFF-bipolar cell CL0000750
    CSI 2.4
    rCSI 3.2%
    PRS 86.1%
  • mucous neck cell CL0000651
    CSI 2.5
    rCSI 3.6%
    PRS 90.2%
  • retina horizontal cell CL0000745
    CSI 2.7
    rCSI 4.1%
    PRS 82.9%
  • tendon cell CL0000388
    CSI 2.7
    rCSI 7.1%
    PRS 90.3%
  • mesenchymal cell CL0008019
    CSI 2.8
    rCSI 7.0%
    PRS 79.7%
  • fibroblast of breast CL4006000
    CSI 2.8
    rCSI 11.8%
    PRS 88.8%
  • choroid plexus epithelial cell CL0000706
    CSI 2.8
    rCSI 4.6%
    PRS 76.9%
  • chondrocyte CL0000138
    CSI 2.9
    rCSI 4.5%
    PRS 79.9%
  • myeloid leukocyte CL0000766
    CSI 2.9
    rCSI 2.7%
    PRS 87.0%
  • VIP GABAergic cortical interneuron CL4023016
    CSI 2.9
    rCSI 3.5%
    PRS 70.1%
  • ionocyte CL0005006
    CSI 3.0
    rCSI 3.2%
    PRS 87.7%
  • mesodermal cell CL0000222
    CSI 3.1
    rCSI 3.7%
    PRS 84.0%
  • keratinocyte CL0000312
    CSI 3.3
    rCSI 2.7%
    PRS 87.6%
  • intestinal crypt stem cell of small intestine CL0009017
    CSI 3.3
    rCSI 8.8%
    PRS 88.9%
  • intestinal epithelial cell CL0002563
    CSI 3.3
    rCSI 3.5%
    PRS 83.2%
  • pancreatic D cell CL0000173
    CSI 3.4
    rCSI 3.3%
    PRS 87.7%
  • cytotoxic T cell CL0000910
    CSI 3.4
    rCSI 19.6%
    PRS 87.0%
  • squamous epithelial cell CL0000076
    CSI 3.5
    rCSI 8.4%
    PRS 84.5%
  • luminal cell of prostate epithelium CL0002340
    CSI 3.6
    rCSI 19.6%
    PRS 91.5%
  • helper T cell CL0000912
    CSI 3.7
    rCSI 5.2%
    PRS 83.0%
  • cardiac endothelial cell CL0010008
    CSI 3.8
    rCSI 15.5%
    PRS 86.3%
  • inhibitory interneuron CL0000498
    CSI 3.9
    rCSI 8.9%
    PRS 75.2%
  • pvalb GABAergic cortical interneuron CL4023018
    CSI 4.0
    rCSI 5.0%
    PRS 67.9%
  • ciliated epithelial cell CL0000067
    CSI 4.1
    rCSI 3.6%
    PRS 76.1%
  • basal cell of prostate epithelium CL0002341
    CSI 4.2
    rCSI 12.1%
    PRS 90.1%
  • tracheobronchial smooth muscle cell CL0019019
    CSI 4.2
    rCSI 7.4%
    PRS 89.5%
  • cerebral cortex neuron CL0010012
    CSI 4.3
    rCSI 17.3%
    PRS 77.9%
  • hematopoietic stem cell CL0000037
    CSI 4.3
    rCSI 2.8%
    PRS 87.7%
  • intestinal crypt stem cell of colon CL0009043
    CSI 4.4
    rCSI 33.1%
    PRS 92.4%
  • enteroendocrine cell CL0000164
    CSI 4.5
    rCSI 6.1%
    PRS 84.8%
  • group 3 innate lymphoid cell CL0001071
    CSI 4.7
    rCSI 3.5%
    PRS 90.3%
  • Hofbauer cell CL3000001
    CSI 4.7
    rCSI 8.9%
    PRS 92.0%
  • ON-bipolar cell CL0000749
    CSI 4.9
    rCSI 7.4%
    PRS 85.2%
  • fallopian tube secretory epithelial cell CL4030006
    CSI 5.0
    rCSI 4.8%
    PRS 84.9%
  • pancreatic PP cell CL0002275
    CSI 5.1
    rCSI 20.3%
    PRS 90.7%
  • mononuclear phagocyte CL0000113
    CSI 5.1
    rCSI 11.2%
    PRS 88.8%
  • peripheral nervous system neuron CL2000032
    CSI 5.1
    rCSI 7.0%
    PRS 78.4%
  • respiratory hillock cell CL4030023
    CSI 5.2
    rCSI 9.3%
    PRS 91.5%
  • CD8-positive, alpha-beta memory T cell CL0000909
    CSI 5.3
    rCSI 5.5%
    PRS 94.3%
  • conjunctival epithelial cell CL1000432
    CSI 5.3
    rCSI 8.1%
    PRS 85.6%
  • melanocyte CL0000148
    CSI 5.4
    rCSI 4.0%
    PRS 80.7%
  • lung pericyte CL0009089
    CSI 5.5
    rCSI 14.4%
    PRS 90.8%
  • retinal blood vessel endothelial cell CL0002585
    CSI 5.6
    rCSI 8.9%
    PRS 89.0%
  • ciliated columnar cell of tracheobronchial tree CL0002145
    CSI 5.7
    rCSI 13.0%
    PRS 79.1%
  • retinal bipolar neuron CL0000748
    CSI 5.7
    rCSI 10.7%
    PRS 75.7%
  • multi-ciliated epithelial cell CL0005012
    CSI 5.8
    rCSI 5.8%
    PRS 80.0%
  • stromal cell CL0000499
    CSI 6.0
    rCSI 16.8%
    PRS 81.2%
  • transit amplifying cell of small intestine CL0009012
    CSI 6.0
    rCSI 26.3%
    PRS 91.0%
  • innate lymphoid cell CL0001065
    CSI 6.1
    rCSI 12.7%
    PRS 81.3%
  • transit amplifying cell CL0009010
    CSI 6.2
    rCSI 9.4%
    PRS 91.0%
  • respiratory suprabasal cell CL4033048
    CSI 6.3
    rCSI 8.1%
    PRS 88.3%
  • epithelial cell CL0000066
    CSI 6.4
    rCSI 9.8%
    PRS 74.5%
  • vascular associated smooth muscle cell CL0000359
    CSI 6.5
    rCSI 21.1%
    PRS 83.8%
  • sst GABAergic cortical interneuron CL4023017
    CSI 6.7
    rCSI 8.6%
    PRS 71.2%
  • intestine goblet cell CL0019031
    CSI 6.8
    rCSI 6.0%
    PRS 83.3%
  • smooth muscle cell CL0000192
    CSI 6.9
    rCSI 16.5%
    PRS 81.1%
  • CD8-positive, alpha-beta memory T cell, CD45RO-positive CL0001203
    CSI 7.4
    rCSI 9.0%
    PRS 66.2%
  • adventitial cell CL0002503
    CSI 7.8
    rCSI 18.7%
    PRS 88.7%
  • sncg GABAergic cortical interneuron CL4023015
    CSI 7.9
    rCSI 12.7%
    PRS 71.4%
  • pancreatic A cell CL0000171
    CSI 8.6
    rCSI 9.1%
    PRS 88.4%
  • pancreatic stellate cell CL0002410
    CSI 8.7
    rCSI 50.4%
    PRS 88.2%
  • perivascular cell CL4033054
    CSI 9.1
    rCSI 12.5%
    PRS 89.6%
  • goblet cell CL0000160
    CSI 9.1
    rCSI 8.6%
    PRS 83.8%
  • secretory cell CL0000151
    CSI 9.3
    rCSI 9.7%
    PRS 84.9%
  • T-helper 17 cell CL0000899
    CSI 9.3
    rCSI 7.4%
    PRS 97.2%
  • enteric smooth muscle cell CL0002504
    CSI 9.5
    rCSI 13.5%
    PRS 86.3%
  • BEST4+ enteroycte CL4030026
    CSI 9.9
    rCSI 12.3%
    PRS 86.1%

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Network Configuration

Explore relationships of the current gene. Select an Interaction Source: 'ONTOLOGY' for shared pathways (GO/Reactome) or 'STRING' for protein-protein interactions. Further refine by selecting context genes and comparing Cell Significance Index (CSI) scores between baseline and target cell types and their specific contexts.

Comma-separated if multiple.
Comma-separated if multiple.

Legend:
  • Query Gene
  • Node Color (Target Cell CSI, relative to current network):
    • Very High
    • High
    • Medium
    • Low
    • Very Low
    • CSI N/A
  • Node Size: Proportional to Target Cell CSI magnitude
  • STRING PPI Edge
  • Shared Pathway Edge (ONTOLOGY)

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Other Information

This section provides additional information about the gene, including a description generated by an AI language model and details about associated proteins.

## Summary [NBL1](/details-gene/4681) (Neuroblastoma 1, DAN family BMP antagonist) is a protein-coding gene located on chromosome 1p36.13. As a member of the DAN family, it functions as a secreted antagonist of Bone Morphogenetic Proteins (BMPs). By binding to BMPs in the extracellular space, [NBL1](/details-gene/4681) negatively regulates BMP signaling pathways, which are critical for a wide range of developmental and homeostatic processes, including nervous system development and cell differentiation. Expression data indicates that [NBL1](/details-gene/4681) is most prominently active in various fibroblast populations, particularly within the lung, as well as in epithelial and certain immune cell types, suggesting a key role in tissue maintenance, remodeling, and local immune modulation. A clinical association with this gene has been noted ([Link](https://omim.org/entry/600613)). ## Cellular Roles and Expression Landscape **Overall**, the expression profile of [NBL1](/details-gene/4681) highlights its significant role in stromal and structural cells, particularly fibroblasts. The gene shows its highest significance in lung-resident fibroblasts, including [bronchus fibroblast of lung](/details-cell/CL2000093) (CSI: 57.93), [alveolar type 1 fibroblast cell](/details-cell/CL4028004) (CSI: 40.72), and [fibroblast of lung](/details-cell/CL0002553) (CSI: 33.62), as well as [skin fibroblast](/details-cell/CL0002620) and [myofibroblast cell](/details-cell/CL0000186). This pattern is consistent with a crucial function in maintaining the structural integrity and homeostatic balance of connective tissues, likely through the modulation of extracellular matrix dynamics. Beyond its primary association with fibroblasts, [NBL1](/details-gene/4681) is also significantly expressed in several epithelial and progenitor cell populations. These include [respiratory basal cell](/details-cell/CL0002633) (CSI: 29.23) in the lung and various cells of the gastrointestinal tract, such as [transit amplifying cell of colon](/details-cell/CL0009011) (CSI: 28.77), [enterocyte](/details-cell/CL0000584) (CSI: 17.37), and [colon epithelial cell](/details-cell/CL0011108) (CSI: 17.11). This suggests a role in regulating epithelial cell proliferation and differentiation at mucosal barriers. Furthermore, [NBL1](/details-gene/4681) shows notable expression in immune cells, including [conventional dendritic cell](/details-cell/CL0000990) (CSI: 26.12) and [CD4-positive helper T cell](/details-cell/CL0000492) (CSI: 18.07). This expression pattern points towards a potential immunomodulatory function, where [NBL1](/details-gene/4681) secreted by immune or stromal cells may influence local immune cell trafficking and responses. ## Pathways and Molecular Function The functional annotations for [NBL1](/details-gene/4681) confirm its role as an extracellular regulator of cell signaling. Its primary molecular function is to act as a BMP antagonist through direct [Bmp binding](/details-gene/GO:0036122) in the [extracellular space](/details-gene/GO:0005615). This activity leads to the [negative regulation of bmp signaling pathway](/details-gene/GO:0030514) by sequestering these growth factors and preventing them from interacting with their cell surface receptors. This mechanism underlies its involvement in several key biological processes. Its role in development is highlighted by its association with [nervous system development](/details-gene/GO:0007399) and the [positive regulation of neuron differentiation](/details-gene/GO:0045666). The high expression in fibroblasts and epithelial cells aligns with its function in modulating tissue homeostasis. Furthermore, its annotated role in the [negative regulation of monocyte chemotaxis](/details-gene/GO:0090027) is consistent with its expression in immune cells and suggests a mechanism by which it could shape the inflammatory milieu within tissues. ## Research Directions The specific expression pattern and established anti-BMP function of [NBL1](/details-gene/4681) lead to several testable hypotheses regarding its role in health and disease. 1. **Hypothesis on Tissue Fibrosis:** Given its high expression in various fibroblast populations and its function as a BMP antagonist, [NBL1](/details-gene/4681) may function as a key negative regulator of fibrosis. Since some BMPs are pro-fibrotic, it is hypothesized that locally secreted [NBL1](/details-gene/4681) protects tissues like the lung from excessive fibroblast-to-myofibroblast differentiation and extracellular matrix deposition. A downregulation of [NBL1](/details-gene/4681) could therefore be a contributing factor to the pathogenesis of fibrotic diseases such as idiopathic pulmonary fibrosis (IPF). 2. **Hypothesis on Immune Homeostasis:** The expression of [NBL1](/details-gene/4681) in [conventional dendritic cells](/details-cell/CL0000990) and its documented role in negatively regulating monocyte chemotaxis suggest it contributes to immune quiescence at barrier tissues. We hypothesize that [NBL1](/details-gene/4681) secreted in the gut and lung microenvironments helps to limit the influx of inflammatory monocytes under homeostatic conditions, thereby preventing inappropriate inflammation. ### Proposed Experiment To test the hypothesis that [NBL1](/details-gene/4681) has an anti-fibrotic role (Hypothesis 1), a well-defined *in vitro* model could be employed. Primary human lung fibroblasts would be cultured and stimulated with a pro-fibrotic agent like TGF-beta1 to induce myofibroblast differentiation. The role of [NBL1](/details-gene/4681) could be investigated through loss-of-function and gain-of-function experiments. Knockdown of [NBL1](/details-gene/4681) using siRNA would be expected to potentiate the pro-fibrotic effects of TGF-beta1, leading to increased expression of alpha-smooth muscle actin (α-SMA) and collagen type I, as measured by western blot and qPCR. Conversely, treatment with recombinant human [NBL1](/details-gene/4681) protein would be expected to antagonize TGF-beta1-induced differentiation, thus attenuating the fibrotic response. ### Therapeutic Potential As a secreted protein that antagonizes a critical signaling pathway, [NBL1](/details-gene/4681) has significant therapeutic potential. In diseases characterized by excessive BMP signaling, such as certain fibrotic conditions or cancers, administration of recombinant [NBL1](/details-gene/4681) could serve as a biologic therapy to restore signaling balance. This represents a strategy of *activation* or supplementation. The high expression in fibroblasts suggests that targeting the regulation of endogenous [NBL1](/details-gene/4681) in these cells could also be a viable approach to modulate tissue remodeling and disease progression.

Genular Protein ID: 678218699

Symbol: A0A087WTY6_HUMAN

Name: N/A

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 11237011

Title: Initial sequencing and analysis of the human genome.

PubMed ID: 11237011

DOI: 10.1038/35057062

PubMed ID: 15496913

Title: Finishing the euchromatic sequence of the human genome.

PubMed ID: 15496913

DOI: 10.1038/nature03001

PubMed ID: 16710414

Title: The DNA sequence and biological annotation of human chromosome 1.

PubMed ID: 16710414

DOI: 10.1038/nature04727

Sequence Information:

  • Length: 215
  • Mass: 23239
  • Checksum: 6F601C269975E270
  • Sequence:
  • MCSLALQQLI SMDLFWRLFF VCGQEGLRAL EATGMMLRVL VGAVLPAMLL AAPPPINKLA 
    LFPDKSAWCE AKNITQIVGH SGCEAKSIQN RACLGQCFSY SVPNTFPQST ESLVHCDSCM 
    PAQSMWEIVT LECPGHEEVP RVDKLVEKIL HCSCQACGKE PSHEGLSVYV QGEDGPGSQP 
    GTHPHPHPHP HPGGQTPEPE DPPGAPHTEE EGAED