Details for: SREBF2
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: polychromatophilic erythroblast (CL0000550)
Fold Change: 371.2747
Cell Significance Index: -57.7500 - Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
Fold Change: 227.2482
Cell Significance Index: -57.6400 - Cell Name: embryonic stem cell (CL0002322)
Fold Change: 129.6524
Cell Significance Index: -53.4100 - Cell Name: smooth muscle fiber of ileum (CL1000278)
Fold Change: 125.3700
Cell Significance Index: -59.1900 - Cell Name: mucosal type mast cell (CL0000485)
Fold Change: 116.7487
Cell Significance Index: -47.4300 - Cell Name: ciliated cell of the bronchus (CL0002332)
Fold Change: 49.9611
Cell Significance Index: -47.7000 - Cell Name: orthochromatic erythroblast (CL0000552)
Fold Change: 47.5605
Cell Significance Index: -58.6400 - Cell Name: CD8-alpha-beta-positive, alpha-beta intraepithelial T cell (CL0000796)
Fold Change: 20.9959
Cell Significance Index: -56.2500 - Cell Name: CD8-positive, alpha-beta regulatory T cell (CL0000795)
Fold Change: 16.4906
Cell Significance Index: -50.6500 - Cell Name: stromal cell of bone marrow (CL0010001)
Fold Change: 14.9605
Cell Significance Index: -59.0400 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: 4.1018
Cell Significance Index: 109.9100 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: 3.7879
Cell Significance Index: 105.8600 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: 3.3569
Cell Significance Index: 188.3700 - Cell Name: GABAergic amacrine cell (CL4030027)
Fold Change: 3.3165
Cell Significance Index: 41.1400 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 2.4394
Cell Significance Index: 484.1100 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 2.1450
Cell Significance Index: 430.2800 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 1.7617
Cell Significance Index: 1590.6400 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 1.4199
Cell Significance Index: 509.2800 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: 1.3342
Cell Significance Index: 102.3900 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 1.0574
Cell Significance Index: 171.9800 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 1.0348
Cell Significance Index: 112.5600 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: 0.9592
Cell Significance Index: 172.9100 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: 0.9015
Cell Significance Index: 40.8600 - Cell Name: GABAergic interneuron (CL0011005)
Fold Change: 0.8062
Cell Significance Index: 557.5900 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: 0.6845
Cell Significance Index: 84.1700 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: 0.6593
Cell Significance Index: 44.3300 - Cell Name: midget ganglion cell of retina (CL4023188)
Fold Change: 0.5338
Cell Significance Index: 5.5600 - Cell Name: paneth cell of epithelium of small intestine (CL1000343)
Fold Change: 0.4902
Cell Significance Index: 10.6200 - Cell Name: tonsil germinal center B cell (CL2000006)
Fold Change: 0.4870
Cell Significance Index: 57.4300 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: 0.4861
Cell Significance Index: 29.8800 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: 0.4464
Cell Significance Index: 23.1900 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: 0.4337
Cell Significance Index: 12.5000 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: 0.3927
Cell Significance Index: 739.4800 - Cell Name: cell in vitro (CL0001034)
Fold Change: 0.3888
Cell Significance Index: 212.3200 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: 0.2601
Cell Significance Index: 165.1800 - Cell Name: cerebellar granule cell (CL0001031)
Fold Change: 0.2410
Cell Significance Index: 4.1300 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: 0.1918
Cell Significance Index: 6.7400 - Cell Name: hair follicular keratinocyte (CL2000092)
Fold Change: 0.1774
Cell Significance Index: 78.4200 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: 0.1690
Cell Significance Index: 260.1900 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: 0.1633
Cell Significance Index: 222.1000 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: 0.1406
Cell Significance Index: 63.8200 - Cell Name: hippocampal pyramidal neuron (CL1001571)
Fold Change: 0.1344
Cell Significance Index: 3.8400 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: 0.1322
Cell Significance Index: 6.1700 - Cell Name: anterior lens cell (CL0002223)
Fold Change: 0.1318
Cell Significance Index: 243.0200 - Cell Name: colon goblet cell (CL0009039)
Fold Change: 0.1168
Cell Significance Index: 11.5500 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: 0.0981
Cell Significance Index: 4.3400 - Cell Name: direct pathway medium spiny neuron (CL4023026)
Fold Change: 0.0959
Cell Significance Index: 3.6300 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: 0.0904
Cell Significance Index: 4.2500 - Cell Name: enteroendocrine cell of colon (CL0009042)
Fold Change: 0.0789
Cell Significance Index: 15.0100 - Cell Name: microfold cell of epithelium of small intestine (CL1000353)
Fold Change: 0.0108
Cell Significance Index: 0.7500 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: 0.0059
Cell Significance Index: 1.0000 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: 0.0022
Cell Significance Index: 0.0600 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: -0.0223
Cell Significance Index: -16.8600 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: -0.0248
Cell Significance Index: -3.6100 - Cell Name: lung endothelial cell (CL1001567)
Fold Change: -0.0288
Cell Significance Index: -1.5000 - Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
Fold Change: -0.0410
Cell Significance Index: -30.0300 - Cell Name: umbrella cell of urothelium (CL4030056)
Fold Change: -0.0510
Cell Significance Index: -0.4700 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0603
Cell Significance Index: -44.6300 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0998
Cell Significance Index: -56.3000 - Cell Name: cortical interneuron (CL0008031)
Fold Change: -0.1026
Cell Significance Index: -2.4600 - Cell Name: pancreatic PP cell (CL0002275)
Fold Change: -0.1048
Cell Significance Index: -65.4300 - Cell Name: lactocyte (CL0002325)
Fold Change: -0.1063
Cell Significance Index: -13.7400 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: -0.1471
Cell Significance Index: -20.2100 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.1780
Cell Significance Index: -51.2100 - Cell Name: odontoblast (CL0000060)
Fold Change: -0.2346
Cell Significance Index: -30.0800 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: -0.2418
Cell Significance Index: -18.0200 - Cell Name: transit amplifying cell of small intestine (CL0009012)
Fold Change: -0.2418
Cell Significance Index: -5.0200 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.2589
Cell Significance Index: -26.4500 - Cell Name: epithelial cell of stomach (CL0002178)
Fold Change: -0.2721
Cell Significance Index: -31.7100 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.2958
Cell Significance Index: -62.3000 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: -0.3306
Cell Significance Index: -34.4200 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: -0.3514
Cell Significance Index: -18.4500 - Cell Name: sebum secreting cell (CL0000317)
Fold Change: -0.3994
Cell Significance Index: -28.2500 - Cell Name: OFF midget ganglion cell (CL4033047)
Fold Change: -0.4010
Cell Significance Index: -5.0000 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.4300
Cell Significance Index: -49.2600 - Cell Name: early pro-B cell (CL0002046)
Fold Change: -0.4560
Cell Significance Index: -29.4200 - Cell Name: cardiac muscle cell (CL0000746)
Fold Change: -0.4978
Cell Significance Index: -7.3500 - Cell Name: skeletal muscle fiber (CL0008002)
Fold Change: -0.5003
Cell Significance Index: -12.8600 - Cell Name: leptomeningeal cell (CL0000708)
Fold Change: -0.5013
Cell Significance Index: -10.7200 - Cell Name: transit amplifying cell of colon (CL0009011)
Fold Change: -0.5442
Cell Significance Index: -17.4300 - Cell Name: enteroendocrine cell of small intestine (CL0009006)
Fold Change: -0.6005
Cell Significance Index: -15.0100 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: -0.6231
Cell Significance Index: -39.2700 - Cell Name: Purkinje cell (CL0000121)
Fold Change: -0.6252
Cell Significance Index: -13.6900 - Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
Fold Change: -0.6432
Cell Significance Index: -50.9400 - Cell Name: granulosa cell (CL0000501)
Fold Change: -0.6446
Cell Significance Index: -16.9500 - Cell Name: fibroblast of mammary gland (CL0002555)
Fold Change: -0.7064
Cell Significance Index: -20.2500 - Cell Name: ON midget ganglion cell (CL4033046)
Fold Change: -0.7139
Cell Significance Index: -9.0100 - Cell Name: retinal ganglion cell (CL0000740)
Fold Change: -0.7420
Cell Significance Index: -6.1300 - Cell Name: preadipocyte (CL0002334)
Fold Change: -0.7683
Cell Significance Index: -15.0000 - Cell Name: endothelial cell of placenta (CL0009092)
Fold Change: -0.7746
Cell Significance Index: -4.6800 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: -0.8130
Cell Significance Index: -49.8500 - Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
Fold Change: -0.8165
Cell Significance Index: -17.3900 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: -0.8356
Cell Significance Index: -11.4000 - Cell Name: CD4-positive, alpha-beta memory T cell, CD45RO-positive (CL0001204)
Fold Change: -0.9040
Cell Significance Index: -26.5500 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: -0.9718
Cell Significance Index: -30.9500 - Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
Fold Change: -0.9859
Cell Significance Index: -34.2600 - Cell Name: corneal endothelial cell (CL0000132)
Fold Change: -1.0083
Cell Significance Index: -15.3400 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
Fold Change: -1.0162
Cell Significance Index: -33.2700 - Cell Name: periportal region hepatocyte (CL0019026)
Fold Change: -1.0393
Cell Significance Index: -15.3400 - Cell Name: centrilobular region hepatocyte (CL0019029)
Fold Change: -1.0703
Cell Significance Index: -18.0300
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 1746848007
Symbol: SRBP2_HUMAN
Name: Class D basic helix-loop-helix protein 2
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 7903453
Title: SREBP-2, a second basic-helix-loop-helix-leucine zipper protein that stimulates transcription by binding to a sterol regulatory element.
PubMed ID: 7903453
PubMed ID: 15461802
Title: A genome annotation-driven approach to cloning the human ORFeome.
PubMed ID: 15461802
PubMed ID: 10591208
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 8402897
Title: SREBP-1, a basic-helix-loop-helix-leucine zipper protein that controls transcription of the low density lipoprotein receptor gene.
PubMed ID: 8402897
PubMed ID: 11477106
Title: Direct demonstration of rapid degradation of nuclear sterol regulatory element-binding proteins by the ubiquitin-proteasome pathway.
PubMed ID: 11477106
PubMed ID: 12202038
Title: Crucial step in cholesterol homeostasis: sterols promote binding of SCAP to INSIG-1, a membrane protein that facilitates retention of SREBPs in ER.
PubMed ID: 12202038
PubMed ID: 12177166
Title: Transcriptional activities of nuclear SREBP-1a, -1c, and -2 to different target promoters of lipogenic and cholesterogenic genes.
PubMed ID: 12177166
PubMed ID: 8626610
Title: Regulated cleavage of sterol regulatory element binding proteins requires sequences on both sides of the endoplasmic reticulum membrane.
PubMed ID: 8626610
PubMed ID: 8643593
Title: Purification and cDNA cloning of a second apoptosis-related cysteine protease that cleaves and activates sterol regulatory element binding proteins.
PubMed ID: 8643593
PubMed ID: 9651382
Title: Second-site cleavage in sterol regulatory element-binding protein occurs at transmembrane junction as determined by cysteine panning.
PubMed ID: 9651382
PubMed ID: 10805775
Title: Asparagine-proline sequence within membrane-spanning segment of SREBP triggers intramembrane cleavage by site-2 protease.
PubMed ID: 10805775
PubMed ID: 19706601
Title: The sterol-sensing endoplasmic reticulum (ER) membrane protein TRC8 hampers ER to Golgi transport of sterol regulatory element-binding protein-2 (SREBP-2)/SREBP cleavage-activated protein and reduces SREBP-2 cleavage.
PubMed ID: 19706601
PubMed ID: 23186163
Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.
PubMed ID: 23186163
DOI: 10.1021/pr300630k
PubMed ID: 28849786
Title: SREBP-regulated lipid metabolism: convergent physiology - divergent pathophysiology.
PubMed ID: 28849786
PubMed ID: 28112733
Title: Site-specific mapping of the human SUMO proteome reveals co-modification with phosphorylation.
PubMed ID: 28112733
DOI: 10.1038/nsmb.3366
PubMed ID: 32322062
Title: The gluconeogenic enzyme PCK1 phosphorylates INSIG1/2 for lipogenesis.
PubMed ID: 32322062
PubMed ID: 35120642
Title: Directed mutational scanning reveals a balance between acidic and hydrophobic residues in strong human activation domains.
PubMed ID: 35120642
PubMed ID: 14645851
Title: The structure of importin-beta bound to SREBP-2: nuclear import of a transcription factor.
PubMed ID: 14645851
PubMed ID: 16959974
Title: The consensus coding sequences of human breast and colorectal cancers.
PubMed ID: 16959974
Sequence Information:
- Length: 1141
- Mass: 123688
- Checksum: 481B1D8E2A2306D2
- Sequence:
MDDSGELGGL ETMETLTELG DELTLGDIDE MLQFVSNQVG EFPDLFSEQL CSSFPGSGGS GSSSGSSGSS SSSSNGRGSS SGAVDPSVQR SFTQVTLPSF SPSAASPQAP TLQVKVSPTS VPTTPRATPI LQPRPQPQPQ PQTQLQQQTV MITPTFSTTP QTRIIQQPLI YQNAATSFQV LQPQVQSLVT SSQVQPVTIQ QQVQTVQAQR VLTQTANGTL QTLAPATVQT VAAPQVQQVP VLVQPQIIKT DSLVLTTLKT DGSPVMAAVQ NPALTALTTP IQTAALQVPT LVGSSGTILT TMPVMMGQEK VPIKQVPGGV KQLEPPKEGE RRTTHNIIEK RYRSSINDKI IELKDLVMGT DAKMHKSGVL RKAIDYIKYL QQVNHKLRQE NMVLKLANQK NKLLKGIDLG SLVDNEVDLK IEDFNQNVLL MSPPASDSGS QAGFSPYSID SEPGSPLLDD AKVKDEPDSP PVALGMVDRS RILLCVLTFL CLSFNPLTSL LQWGGAHDSD QHPHSGSGRS VLSFESGSGG WFDWMMPTLL LWLVNGVIVL SVFVKLLVHG EPVIRPHSRS SVTFWRHRKQ ADLDLARGDF AAAAGNLQTC LAVLGRALPT SRLDLACSLS WNVIRYSLQK LRLVRWLLKK VFQCRRATPA TEAGFEDEAK TSARDAALAY HRLHQLHITG KLPAGSACSD VHMALCAVNL AECAEEKIPP STLVEIHLTA AMGLKTRCGG KLGFLASYFL SRAQSLCGPE HSAVPDSLRW LCHPLGQKFF MERSWSVKSA AKESLYCAQR NPADPIAQVH QAFCKNLLER AIESLVKPQA KKKAGDQEEE SCEFSSALEY LKLLHSFVDS VGVMSPPLSR SSVLKSALGP DIICRWWTSA ITVAISWLQG DDAAVRSHFT KVERIPKALE VTESPLVKAI FHACRAMHAS LPGKADGQQS SFCHCERASG HLWSSLNVSG ATSDPALNHV VQLLTCDLLL SLRTALWQKQ ASASQAVGET YHASGAELAG FQRDLGSLRR LAHSFRPAYR KVFLHEATVR LMAGASPTRT HQLLEHSLRR RTTQSTKHGE VDAWPGQRER ATAILLACRH LPLSFLSSPG QRAVLLAEAA RTLEKVGDRR SCNDCQQMIV KLGGGTAIAA S
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.