Details for: SS18

Gene ID: 6760

Symbol: SS18

Ensembl ID: ENSG00000141380

Description: SS18 subunit of BAF chromatin remodeling complex

Associated with

Cells (max top 100)

(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)

  • Cell Name: polychromatophilic erythroblast (CL0000550)
    Fold Change: 275.4826
    Cell Significance Index: -42.8500
  • Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
    Fold Change: 171.3232
    Cell Significance Index: -43.4600
  • Cell Name: smooth muscle fiber of ileum (CL1000278)
    Fold Change: 95.9920
    Cell Significance Index: -45.3200
  • Cell Name: mucosal type mast cell (CL0000485)
    Fold Change: 94.0784
    Cell Significance Index: -38.2200
  • Cell Name: peripheral blood mononuclear cell (CL2000001)
    Fold Change: 84.6836
    Cell Significance Index: -43.5600
  • Cell Name: ciliated cell of the bronchus (CL0002332)
    Fold Change: 40.3355
    Cell Significance Index: -38.5100
  • Cell Name: orthochromatic erythroblast (CL0000552)
    Fold Change: 36.4490
    Cell Significance Index: -44.9400
  • Cell Name: CD8-alpha-beta-positive, alpha-beta intraepithelial T cell (CL0000796)
    Fold Change: 15.9657
    Cell Significance Index: -42.7700
  • Cell Name: CD8-positive, alpha-beta regulatory T cell (CL0000795)
    Fold Change: 11.5613
    Cell Significance Index: -35.5100
  • Cell Name: stromal cell of bone marrow (CL0010001)
    Fold Change: 11.4824
    Cell Significance Index: -45.3100
  • Cell Name: epidermal Langerhans cell (CL0002457)
    Fold Change: 10.5273
    Cell Significance Index: -23.0400
  • Cell Name: epithelial cell of small intestine (CL0002254)
    Fold Change: 1.7048
    Cell Significance Index: 277.2700
  • Cell Name: retinal progenitor cell (CL0002672)
    Fold Change: 1.6368
    Cell Significance Index: 91.8500
  • Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
    Fold Change: 1.6057
    Cell Significance Index: 322.1000
  • Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
    Fold Change: 1.2733
    Cell Significance Index: 35.5900
  • Cell Name: neoplastic cell (CL0001063)
    Fold Change: 1.0949
    Cell Significance Index: 217.2900
  • Cell Name: centrilobular region hepatocyte (CL0019029)
    Fold Change: 1.0095
    Cell Significance Index: 17.0100
  • Cell Name: intestinal crypt stem cell of colon (CL0009043)
    Fold Change: 0.9729
    Cell Significance Index: 105.8300
  • Cell Name: preadipocyte (CL0002334)
    Fold Change: 0.8577
    Cell Significance Index: 16.7400
  • Cell Name: gut absorptive cell (CL0000677)
    Fold Change: 0.6839
    Cell Significance Index: 41.0600
  • Cell Name: tonsil germinal center B cell (CL2000006)
    Fold Change: 0.6714
    Cell Significance Index: 79.1800
  • Cell Name: basal cell of urothelium (CL1000486)
    Fold Change: 0.6619
    Cell Significance Index: 81.3900
  • Cell Name: placental villous trophoblast (CL2000060)
    Fold Change: 0.6389
    Cell Significance Index: 17.0600
  • Cell Name: intermediate cell of urothelium (CL4030055)
    Fold Change: 0.6242
    Cell Significance Index: 112.5200
  • Cell Name: cardiac muscle myoblast (CL0000513)
    Fold Change: 0.6215
    Cell Significance Index: 47.7000
  • Cell Name: cell in vitro (CL0001034)
    Fold Change: 0.5484
    Cell Significance Index: 299.4800
  • Cell Name: stromal cell of ovary (CL0002132)
    Fold Change: 0.5404
    Cell Significance Index: 74.2100
  • Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
    Fold Change: 0.5160
    Cell Significance Index: 185.0900
  • Cell Name: bladder urothelial cell (CL1001428)
    Fold Change: 0.5022
    Cell Significance Index: 26.0900
  • Cell Name: cortical cell of adrenal gland (CL0002097)
    Fold Change: 0.4505
    Cell Significance Index: 12.0700
  • Cell Name: microfold cell of epithelium of small intestine (CL1000353)
    Fold Change: 0.4441
    Cell Significance Index: 30.7200
  • Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
    Fold Change: 0.4397
    Cell Significance Index: 15.2800
  • Cell Name: colon goblet cell (CL0009039)
    Fold Change: 0.3956
    Cell Significance Index: 39.1300
  • Cell Name: hair follicular keratinocyte (CL2000092)
    Fold Change: 0.3837
    Cell Significance Index: 169.6600
  • Cell Name: GABAergic amacrine cell (CL4030027)
    Fold Change: 0.3402
    Cell Significance Index: 4.2200
  • Cell Name: GABAergic interneuron (CL0011005)
    Fold Change: 0.3266
    Cell Significance Index: 225.9200
  • Cell Name: hippocampal granule cell (CL0001033)
    Fold Change: 0.3074
    Cell Significance Index: 20.6700
  • Cell Name: enteroendocrine cell of small intestine (CL0009006)
    Fold Change: 0.2984
    Cell Significance Index: 7.4600
  • Cell Name: basal cell of prostate epithelium (CL0002341)
    Fold Change: 0.2757
    Cell Significance Index: 7.5100
  • Cell Name: tuft cell of colon (CL0009041)
    Fold Change: 0.2553
    Cell Significance Index: 230.5200
  • Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
    Fold Change: 0.2279
    Cell Significance Index: 144.7200
  • Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
    Fold Change: 0.2277
    Cell Significance Index: 10.7000
  • Cell Name: fibroblast of cardiac tissue (CL0002548)
    Fold Change: 0.2277
    Cell Significance Index: 3.2700
  • Cell Name: enteroendocrine cell of colon (CL0009042)
    Fold Change: 0.2171
    Cell Significance Index: 41.3100
  • Cell Name: enterocyte of epithelium of small intestine (CL1000334)
    Fold Change: 0.1810
    Cell Significance Index: 5.2200
  • Cell Name: pigmented epithelial cell (CL0000529)
    Fold Change: 0.1725
    Cell Significance Index: 324.8600
  • Cell Name: acinar cell of salivary gland (CL0002623)
    Fold Change: 0.1523
    Cell Significance Index: 7.1000
  • Cell Name: enterocyte of epithelium of large intestine (CL0002071)
    Fold Change: 0.1492
    Cell Significance Index: 6.7700
  • Cell Name: lung endothelial cell (CL1001567)
    Fold Change: 0.1265
    Cell Significance Index: 6.5900
  • Cell Name: odontoblast (CL0000060)
    Fold Change: 0.1186
    Cell Significance Index: 15.2000
  • Cell Name: skeletal muscle fiber (CL0008002)
    Fold Change: 0.1078
    Cell Significance Index: 2.7700
  • Cell Name: ciliary muscle cell (CL1000443)
    Fold Change: 0.0913
    Cell Significance Index: 41.4300
  • Cell Name: early pro-B cell (CL0002046)
    Fold Change: 0.0753
    Cell Significance Index: 4.8600
  • Cell Name: anterior lens cell (CL0002223)
    Fold Change: 0.0726
    Cell Significance Index: 133.8600
  • Cell Name: lens epithelial cell (CL0002224)
    Fold Change: 0.0672
    Cell Significance Index: 103.5000
  • Cell Name: cerebellar granule cell (CL0001031)
    Fold Change: 0.0543
    Cell Significance Index: 0.9300
  • Cell Name: sebum secreting cell (CL0000317)
    Fold Change: 0.0543
    Cell Significance Index: 3.8400
  • Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
    Fold Change: 0.0539
    Cell Significance Index: 4.0200
  • Cell Name: secondary lens fiber (CL0002225)
    Fold Change: 0.0482
    Cell Significance Index: 65.5900
  • Cell Name: lactocyte (CL0002325)
    Fold Change: 0.0313
    Cell Significance Index: 4.0500
  • Cell Name: small intestine goblet cell (CL1000495)
    Fold Change: 0.0296
    Cell Significance Index: 1.0400
  • Cell Name: granulosa cell (CL0000501)
    Fold Change: 0.0103
    Cell Significance Index: 0.2700
  • Cell Name: pancreatic acinar cell (CL0002064)
    Fold Change: 0.0064
    Cell Significance Index: 1.1000
  • Cell Name: pancreatic PP cell (CL0002275)
    Fold Change: -0.0157
    Cell Significance Index: -9.8200
  • Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
    Fold Change: -0.0183
    Cell Significance Index: -13.4200
  • Cell Name: pancreatic A cell (CL0000171)
    Fold Change: -0.0254
    Cell Significance Index: -18.7800
  • Cell Name: pigmented ciliary epithelial cell (CL0002303)
    Fold Change: -0.0260
    Cell Significance Index: -3.7800
  • Cell Name: pulmonary alveolar epithelial cell (CL0000322)
    Fold Change: -0.0345
    Cell Significance Index: -26.1400
  • Cell Name: type B pancreatic cell (CL0000169)
    Fold Change: -0.0600
    Cell Significance Index: -33.8200
  • Cell Name: abnormal cell (CL0001061)
    Fold Change: -0.0968
    Cell Significance Index: -9.8900
  • Cell Name: pancreatic D cell (CL0000173)
    Fold Change: -0.1237
    Cell Significance Index: -26.0600
  • Cell Name: dopaminergic neuron (CL0000700)
    Fold Change: -0.1291
    Cell Significance Index: -37.1600
  • Cell Name: fibro/adipogenic progenitor cell (CL0009099)
    Fold Change: -0.1338
    Cell Significance Index: -6.7600
  • Cell Name: forebrain neuroblast (CL1000042)
    Fold Change: -0.1393
    Cell Significance Index: -8.5600
  • Cell Name: epithelial cell of stomach (CL0002178)
    Fold Change: -0.1500
    Cell Significance Index: -17.4800
  • Cell Name: eye photoreceptor cell (CL0000287)
    Fold Change: -0.1531
    Cell Significance Index: -9.6500
  • Cell Name: pancreatic ductal cell (CL0002079)
    Fold Change: -0.2387
    Cell Significance Index: -27.3500
  • Cell Name: indirect pathway medium spiny neuron (CL4023029)
    Fold Change: -0.2485
    Cell Significance Index: -10.9900
  • Cell Name: hippocampal pyramidal neuron (CL1001571)
    Fold Change: -0.2723
    Cell Significance Index: -7.7700
  • Cell Name: conjunctival epithelial cell (CL1000432)
    Fold Change: -0.2902
    Cell Significance Index: -3.9600
  • Cell Name: glycinergic neuron (CL1001509)
    Fold Change: -0.3064
    Cell Significance Index: -16.0900
  • Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
    Fold Change: -0.3122
    Cell Significance Index: -6.6500
  • Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
    Fold Change: -0.3194
    Cell Significance Index: -33.2600
  • Cell Name: direct pathway medium spiny neuron (CL4023026)
    Fold Change: -0.3239
    Cell Significance Index: -12.2700
  • Cell Name: fibroblast of dermis (CL0002551)
    Fold Change: -0.3836
    Cell Significance Index: -8.0300
  • Cell Name: pancreatic endocrine cell (CL0008024)
    Fold Change: -0.3960
    Cell Significance Index: -45.2000
  • Cell Name: periportal region hepatocyte (CL0019026)
    Fold Change: -0.4038
    Cell Significance Index: -5.9600
  • Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
    Fold Change: -0.4701
    Cell Significance Index: -37.2300
  • Cell Name: fibroblast of mammary gland (CL0002555)
    Fold Change: -0.4800
    Cell Significance Index: -13.7600
  • Cell Name: cardiac muscle cell (CL0000746)
    Fold Change: -0.5480
    Cell Significance Index: -8.0900
  • Cell Name: leptomeningeal cell (CL0000708)
    Fold Change: -0.6072
    Cell Significance Index: -12.9800
  • Cell Name: paneth cell of epithelium of small intestine (CL1000343)
    Fold Change: -0.6455
    Cell Significance Index: -13.9900
  • Cell Name: retinal rod cell (CL0000604)
    Fold Change: -0.6535
    Cell Significance Index: -7.7900
  • Cell Name: Hofbauer cell (CL3000001)
    Fold Change: -0.6634
    Cell Significance Index: -5.4100
  • Cell Name: peg cell (CL4033014)
    Fold Change: -0.6895
    Cell Significance Index: -15.9300
  • Cell Name: cardiac endothelial cell (CL0010008)
    Fold Change: -0.7154
    Cell Significance Index: -10.2900
  • Cell Name: CD4-positive, alpha-beta memory T cell, CD45RO-positive (CL0001204)
    Fold Change: -0.7184
    Cell Significance Index: -21.1000
  • Cell Name: intestinal tuft cell (CL0019032)
    Fold Change: -0.7262
    Cell Significance Index: -44.5200
  • Cell Name: endothelial cell of placenta (CL0009092)
    Fold Change: -0.7390
    Cell Significance Index: -4.4700
  • Cell Name: Sertoli cell (CL0000216)
    Fold Change: -0.7700
    Cell Significance Index: -10.8000

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Other Information

**Key Characteristics:** SS18 is a member of the BAF complex, which is a heterochromatic protein complex that regulates chromatin architecture and gene expression. The BAF complex is composed of multiple subunits, including SS18, BAF170, BAF180, and BAF205, among others. SS18 is a conserved subunit that interacts with other BAF complex subunits to form a functional chromatin remodeling complex. The SS18 gene is highly expressed in various cell types, suggesting its importance in maintaining cellular homeostasis. **Pathways and Functions:** The SS18 gene is involved in several signaling pathways, including: 1. **Chromatin remodeling:** The BAF complex, of which SS18 is a part, regulates chromatin structure by removing histone modifications and altering chromatin architecture. This process is essential for gene expression and cellular differentiation. 2. **Ephrin receptor signaling pathway:** SS18 interacts with the Ephrin receptor, a key player in cell-cell communication and tissue patterning. This interaction regulates cellular movement, differentiation, and survival. 3. **Intracellular signal transduction:** SS18 is involved in the regulation of intracellular signaling pathways, including those mediated by protein kinases and phosphatases. 4. **Microtubule cytoskeleton organization:** SS18 interacts with microtubules, which are essential for maintaining cellular shape and organization. **Functions:** 1. **Regulation of transcription:** SS18 is involved in the regulation of transcription by RNA polymerase II, a key enzyme responsible for gene expression. 2. **Cell population maintenance:** SS18 is expressed in neural stem cells and neurons, suggesting its role in maintaining cell population homeostasis. 3. **Differentiation regulation:** SS18 is involved in regulating cellular differentiation, including the differentiation of neural stem cells into neurons. 4. **Apoptosis regulation:** SS18 may also play a role in regulating apoptosis, or programmed cell death. **Clinical Significance:** Dysregulation of the SS18 gene has been implicated in various diseases, including: 1. **Neurological disorders:** SS18 mutations have been associated with neurological disorders, such as autism and schizophrenia. 2. **Cancer:** SS18 is overexpressed in certain types of cancer, including glioblastoma and breast cancer. 3. **Neurodevelopmental disorders:** SS18 mutations have been linked to neurodevelopmental disorders, such as intellectual disability and epilepsy. In conclusion, the SS18 gene plays a crucial role in regulating cellular homeostasis, differentiation, and gene expression. Its dysregulation has been implicated in various diseases, highlighting the importance of understanding the function and regulation of this gene. Further research is necessary to elucidate the mechanisms by which SS18 regulates cellular processes and to explore its potential as a therapeutic target for diseases.

Genular Protein ID: 1891842283

Symbol: SSXT_HUMAN

Name: Protein SSXT

UniProtKB Accession Codes:

Q15532 B0YJ95 Q16404 Q4VAX1 Q9BXC6

Database IDs:

AGR 1 AlphaFoldDB 1 Antibodypedia 1 Bgee 1 BindingDB 1 BioGRID 1 BioGRID-ORCS 1 BioMuta 1 CCDS 2 CTD 1 ChiTaRS 1 ComplexPortal 8 DNASU 1 DisGeNET 1 EMBL 7 Ensembl 2 ExpressionAtlas 1 GO 21 GeneCards 1 GeneTree 1 GeneWiki 1 GenomeRNAi 1 GlyGen 1 HGNC 1 HPA 1 InParanoid 1 IntAct 1 InterPro 2 KEGG 1 MANE-Select 1 MIM 1 MINT 1 MalaCards 1 MassIVE 1 NCBI Taxonomy 1 OMA 1 OpenTargets 1 Orphanet 1 OrthoDB 1 PANTHER 2 PDB 1 PDBsum 1 PIR 1 PRO 1 PathwayCommons 1 PaxDb 1 PeptideAtlas 1 Pfam 1 PharmGKB 1 Pharos 1 PhosphoSitePlus 1 PhylomeDB 1 Proteomes 1 ProteomicsDB 2 Pumba 1 RNAct 1 Reactome 2 RefSeq 3 SIGNOR 1 SMR 1 STRING 1 SignaLink 1 TreeFam 1 UCSC 1 VEuPathDB 1 eggNOG 1 iPTMnet 1 jPOST 1 neXtProt 1

Citations:

PubMed ID: 7951320

Title: Identification of novel genes, SYT and SSX, involved in the t(X;18)(p11.2;q11.2) translocation found in human synovial sarcoma.

PubMed ID: 7951320

DOI: 10.1038/ng0894-502

PubMed ID: 11368913

Title: Cloning and characterization of spliced fusion transcript variants of synovial sarcoma: SYT/SSX4, SYT/SSX4v, and SYT/SSX2v. Possible regulatory role of the fusion gene product in wild type SYT expression.

PubMed ID: 11368913

DOI: 10.1016/s0378-1119(01)00412-7

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 7495284

Title: Molecular diagnosis of synovial sarcoma and characterization of a variant SYT-SSX2 fusion transcript.

PubMed ID: 7495284

PubMed ID: 7539744

Title: Fusion of SYT to two genes, SSX1 and SSX2, encoding proteins with homology to the Kruppel-associated box in human synovial sarcoma.

PubMed ID: 7539744

DOI: 10.1002/j.1460-2075.1995.tb07228.x

PubMed ID: 11423977

Title: The synovial sarcoma associated protein SYT interacts with the acute leukemia associated protein AF10.

PubMed ID: 11423977

DOI: 10.1038/sj.onc.1204419

PubMed ID: 15919756

Title: Synovial sarcoma translocation (SYT) encodes a nuclear receptor coactivator.

PubMed ID: 15919756

DOI: 10.1210/en.2004-1513

PubMed ID: 22814378

Title: N-terminal acetylome analyses and functional insights of the N-terminal acetyltransferase NatB.

PubMed ID: 22814378

DOI: 10.1073/pnas.1210303109

PubMed ID: 29374058

Title: Glioma tumor suppressor candidate region gene 1 (GLTSCR1) and its paralog GLTSCR1-like form SWI/SNF chromatin remodeling subcomplexes.

PubMed ID: 29374058

DOI: 10.1074/jbc.ra117.001065

Sequence Information:

  • Length: 418
  • Mass: 45929
  • Checksum: 7E089D557538252F
  • Sequence:
    • MSVAFAAPRQ RGKGEITPAA IQKMLDDNNH LIQCIMDSQN KGKTSECSQY QQMLHTNLVY 
LATIADSNQN MQSLLPAPPT QNMPMGPGGM NQSGPPPPPR SHNMPSDGMV GGGPPAPHMQ 
NQMNGQMPGP NHMPMQGPGP NQLNMTNSSM NMPSSSHGSM GGYNHSVPSS QSMPVQNQMT 
MSQGQPMGNY GPRPNMSMQP NQGPMMHQQP PSQQYNMPQG GGQHYQGQQP PMGMMGQVNQ 
GNHMMGQRQI PPYRPPQQGP PQQYSGQEDY YGDQYSHGGQ GPPEGMNQQY YPDGHNDYGY 
QQPSYPEQGY DRPYEDSSQH YYEGGNSQYG QQQDAYQGPP PQQGYPPQQQ QYPGQQGYPG 
QQQGYGPSQG GPGPQYPNYP QGQGQQYGGY RPTQPGPPQP PQQRPYGYDQ GQYGNYQQ

Genular Protein ID: 1657200808

Symbol: B4DLD3_HUMAN

Name: N/A

UniProtKB Accession Codes:

B4DLD3

Database IDs:

ARBA 3 Antibodypedia 1 Bgee 1 BioGRID-ORCS 1 CTD 1 ChiTaRS 1 DNASU 1 DisGeNET 1 EMBL 3 Ensembl 2 GO 2 GeneTree 1 HGNC 1 HOGENOM 1 InterPro 2 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PeptideAtlas 1 Pfam 2 Proteomes 2 ProteomicsDB 2 RefSeq 2 SAM 1 UCSC 1 VEuPathDB 1

Citations:

PubMed ID: 11237011

Title: Initial sequencing and analysis of the human genome.

PubMed ID: 11237011

DOI: 10.1038/35057062

PubMed ID: 15496913

Title: Finishing the euchromatic sequence of the human genome.

PubMed ID: 15496913

DOI: 10.1038/nature03001

PubMed ID: 16177791

Title: DNA sequence and analysis of human chromosome 18.

PubMed ID: 16177791

DOI: 10.1038/nature03983

Sequence Information:

  • Length: 395
  • Mass: 43519
  • Checksum: 791BCA279022C064
  • Sequence:
    • MLDDNNHLIQ CIMDSQNKGK TSECSQYQQM LHTNLVYLAT IADSNQNMQS LLPAPPTQNM 
PMGPGGMNQS GPPPPPRSHN MPSDGMVGGG PPAPHMQNQM NGQMPGPNHM PMQGPGPNQL 
NMTNSSMNMP SSSHGSMGGY NHSVPSSQSM PVQNQMTMSQ GQPMGNYGPR PNMSMQPNQG 
PMMHQQPPSQ QYNMPQGGGQ HYQGQQPPMG MMGQVNQGNH MMGQRQIPPY RPPQQGPPQQ 
YSGQEDYYGD QYSHGGQGPP EGMNQQYYPD GHNDYGYQQP SYPEQGYDRP YEDSSQHYYE 
GGNSQYGQQQ DAYQGPPPQQ GYPPQQQQYP GQQGYPGQQQ GYGPSQGGPG PQYPNYPQGQ 
GQQYGGYRPT QPGPPQPPQQ RPYGYDQGQY GNYQQ

Genular Protein ID: 1545718878

Symbol: Q4VAX0_HUMAN

Name: N/A

UniProtKB Accession Codes:

Q4VAX0

Database IDs:

ARBA 3 AlphaFoldDB 1 Antibodypedia 1 BioGRID-ORCS 1 CTD 1 ChiTaRS 1 DNASU 1 DisGeNET 1 EMBL 9 ExpressionAtlas 1 GO 2 InterPro 2 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 Pfam 2 PharmGKB 1 RefSeq 1 SAM 1 SMR 1 UCSC 1 VEuPathDB 1

Citations:

PubMed ID: 11181995

Title: The sequence of the human genome.

PubMed ID: 11181995

DOI: 10.1126/science.1058040

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

Sequence Information:

  • Length: 387
  • Mass: 42216
  • Checksum: A1D64C2C588C532A
  • Sequence:
    • MSVAFAAPRQ RGKGEITPAA IQKMLDDNNH LIQCIMDSQN KGKTSECSQY QQMLHTNLVY 
LATIADSNQN MQSLLPAPPT QNMPMGPGGM NQSGPPPPPR SHNMPSDGMV GGGPPAPHMQ 
NQMNGQMPGP NHMPMQGPGP NQLNMTNSSM NMPSSSHGSM GGYNHSVPSS QSMPVQNQMT 
MSQGQPMGNY GPRPNMSMQP NQGPMMHQQP PSQQYNMPQG GGQHYQGQQP PMGMMGQVNQ 
GNHMMGQRQI PPYRPPQQGP PQQYSGQEDY YGDQYSHGGQ GPPEGMNQQY YPDGNSQYGQ 
QQDAYQGPPP QQGYPPQQQQ YPGQQGYPGQ QQGYGPSQGG PGPQYPNYPQ GQGQQYGGYR 
PTQPGPPQPP QQRPYGYDQG QYGNYQQ

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.