Details for: TLE1

Gene ID: 7088

Gene Type:  Protein-coding  - A gene that serves as a template for producing a messenger RNA (mRNA) molecule, which is then translated into a functional protein.

Symbol: TLE1

Ensembl ID: ENSG00000196781

Description: TLE family member 1, transcriptional corepressor

Selected Context(s):  Overall

Cell Significance Landscape

Contexts:

Associated with

Significant Cells

Cell Significance Index (CSI) scores for the chosen context(s)

  • kidney loop of Henle thin descending limb epithelial cell CL1001111
    CSI 15.24
    rCSI 21.6%
    PRS 60.02
  • neural crest cell CL0011012
    CSI 13.99
    rCSI 11.06%
    PRS 50.52
  • group 3 innate lymphoid cell CL0001071
    CSI 13.95
    rCSI 10.48%
    PRS 69.33
  • hepatocyte CL0000182
    CSI 13.37
    rCSI 23.93%
    PRS 62.78
  • pro-B cell CL0000826
    CSI 12.73
    rCSI 10.54%
    PRS 66.07
  • squamous epithelial cell CL0000076
    CSI 10.95
    rCSI 25.98%
    PRS 67.19
  • early lymphoid progenitor CL0000936
    CSI 9.95
    rCSI 8.74%
    PRS 69.17
  • conjunctival epithelial cell CL1000432
    CSI 9.87
    rCSI 15.08%
    PRS 64.37
  • cholangiocyte CL1000488
    CSI 9.17
    rCSI 54.95%
    PRS 70.38
  • mature B cell CL0000785
    CSI 9.01
    rCSI 7.83%
    PRS 74.41
  • L5 extratelencephalic projecting glutamatergic cortical neuron CL4023041
    CSI 7.76
    rCSI 27.92%
    PRS 43.44
  • amacrine cell CL0000561
    CSI 7.64
    rCSI 22.14%
    PRS 53.16
  • choroid plexus epithelial cell CL0000706
    CSI 6.59
    rCSI 10.79%
    PRS 52.7
  • neuroblast (sensu Vertebrata) CL0000031
    CSI 5.26
    rCSI 6.75%
    PRS 60.74
  • neural progenitor cell CL0011020
    CSI 5.24
    rCSI 23.06%
    PRS 53.77
  • epithelial cell of lower respiratory tract CL0002632
    CSI 5.01
    rCSI 3.88%
    PRS 65.95
  • enterocyte of epithelium of large intestine CL0002071
    CSI 4.93
    rCSI 25.88%
    PRS 73.08
  • pulmonary capillary endothelial cell CL4028001
    CSI 4.38
    rCSI 8.36%
    PRS 78.18
  • adipocyte CL0000136
    CSI 4.04
    rCSI 5.19%
    PRS 55.94
  • interstitial cell of Cajal CL0002088
    CSI 4.03
    rCSI 5.14%
    PRS 70.04
  • neuroblast (sensu Nematoda and Protostomia) CL0000338
    CSI 3.98
    rCSI 4.6%
    PRS 56.65
  • midbrain dopaminergic neuron CL2000097
    CSI 3.75
    rCSI 23.99%
    PRS 64.85
  • pancreatic acinar cell CL0002064
    CSI 3.64
    rCSI 4.84%
    PRS 70.23
  • perivascular cell CL4033054
    CSI 3.62
    rCSI 4.95%
    PRS 69.69
  • CD16-negative, CD56-bright natural killer cell, human CL0000938
    CSI 3.58
    rCSI 2.68%
    PRS 88.45
  • memory B cell CL0000787
    CSI 3.54
    rCSI 3.49%
    PRS 85.51
  • caudal ganglionic eminence derived cortical interneuron CL4023064
    CSI 3.35
    rCSI 5.92%
    PRS 44.21
  • melanocyte CL0000148
    CSI 3.32
    rCSI 2.46%
    PRS 56.18
  • diffuse bipolar 3b cell CL4033030
    CSI 3.3
    rCSI 21.91%
    PRS 60.53
  • mucus secreting cell CL0000319
    CSI 3.03
    rCSI 4.82%
    PRS 74.75
  • epithelial cell CL0000066
    CSI 2.93
    rCSI 4.51%
    PRS 59.13
  • bronchus fibroblast of lung CL2000093
    CSI 2.82
    rCSI 2.29%
    PRS 64.1
  • interneuron CL0000099
    CSI 2.78
    rCSI 5.58%
    PRS 52.63
  • stem cell CL0000034
    CSI 2.72
    rCSI 2.62%
    PRS 54.47
  • enteroendocrine cell CL0000164
    CSI 2.66
    rCSI 3.64%
    PRS 65.21
  • duct epithelial cell CL0000068
    CSI 2.59
    rCSI 3.79%
    PRS 68.68
  • class switched memory B cell CL0000972
    CSI 2.56
    rCSI 1.91%
    PRS 79.92
  • retinal bipolar neuron CL0000748
    CSI 2.55
    rCSI 4.77%
    PRS 51.79
  • mural cell CL0008034
    CSI 2.52
    rCSI 8.55%
    PRS 57.03
  • cerebral cortex endothelial cell CL1001602
    CSI 2.51
    rCSI 4.34%
    PRS 53.72
  • direct pathway medium spiny neuron CL4023026
    CSI 2.47
    rCSI 59.21%
    PRS 44.11
  • indirect pathway medium spiny neuron CL4023029
    CSI 2.44
    rCSI 58.78%
    PRS 44.92
  • subcutaneous adipocyte CL0002521
    CSI 2.43
    rCSI 12.43%
    PRS 68.28
  • ON-bipolar cell CL0000749
    CSI 2.42
    rCSI 3.6%
    PRS 65.08
  • acinar cell of salivary gland CL0002623
    CSI 2.4
    rCSI 55.87%
    PRS 81.82
  • precursor B cell CL0000817
    CSI 2.39
    rCSI 2.09%
    PRS 72.95
  • pulmonary ionocyte CL0017000
    CSI 2.38
    rCSI 2.9%
    PRS 71.21
  • Mueller cell CL0000636
    CSI 2.37
    rCSI 5.42%
    PRS 55.21
  • lymphoid lineage restricted progenitor cell CL0000838
    CSI 2.37
    rCSI 9.23%
    PRS 83.48
  • mature astrocyte CL0002627
    CSI 2.37
    rCSI 10.07%
    PRS 56.77
  • small pre-B-II cell CL0000954
    CSI 2.34
    rCSI 2.25%
    PRS 84.16
  • myofibroblast cell CL0000186
    CSI 2.26
    rCSI 3.13%
    PRS 64.41
  • respiratory suprabasal cell CL4033048
    CSI 2.24
    rCSI 2.88%
    PRS 68.51
  • L2/3-6 intratelencephalic projecting glutamatergic neuron CL4023040
    CSI 2.21
    rCSI 5.37%
    PRS 43.64
  • vascular leptomeningeal cell CL4023051
    CSI 2.21
    rCSI 3.87%
    PRS 55.55
  • Kupffer cell CL0000091
    CSI 2.14
    rCSI 4.9%
    PRS 63.71
  • plasmablast CL0000980
    CSI 2.13
    rCSI 1.68%
    PRS 70.39
  • immature B cell CL0000816
    CSI 2.11
    rCSI 1.57%
    PRS 77.07
  • retinal blood vessel endothelial cell CL0002585
    CSI 2.09
    rCSI 3.33%
    PRS 67.86
  • luminal cell of prostate epithelium CL0002340
    CSI 2.07
    rCSI 11.14%
    PRS 75.55
  • retina horizontal cell CL0000745
    CSI 2.07
    rCSI 3.15%
    PRS 60.1
  • intestine goblet cell CL0019031
    CSI 2.07
    rCSI 1.83%
    PRS 61.69
  • midzonal region hepatocyte CL0019028
    CSI 2.06
    rCSI 4.83%
    PRS 67.88
  • ciliated epithelial cell CL0000067
    CSI 2.06
    rCSI 1.81%
    PRS 51.61
  • T-helper 17 cell CL0000899
    CSI 2.02
    rCSI 1.6%
    PRS 84.32
  • peripheral nervous system neuron CL2000032
    CSI 1.99
    rCSI 2.72%
    PRS 55.33
  • periportal region hepatocyte CL0019026
    CSI 1.98
    rCSI 7.71%
    PRS 67.94
  • secretory cell CL0000151
    CSI 1.98
    rCSI 2.07%
    PRS 64.05
  • mesenchymal cell CL0008019
    CSI 1.98
    rCSI 5.02%
    PRS 57.82
  • keratinocyte CL0000312
    CSI 1.95
    rCSI 1.63%
    PRS 67.98
  • alveolar adventitial fibroblast CL4028006
    CSI 1.93
    rCSI 3.05%
    PRS 66.15
  • blood vessel endothelial cell CL0000071
    CSI 1.93
    rCSI 4.01%
    PRS 60.83
  • renal alpha-intercalated cell CL0005011
    CSI 1.93
    rCSI 2.58%
    PRS 72.58
  • intrahepatic cholangiocyte CL0002538
    CSI 1.89
    rCSI 4.54%
    PRS 73.44
  • epithelial cell of lung CL0000082
    CSI 1.88
    rCSI 1.56%
    PRS 63.11
  • centrilobular region hepatocyte CL0019029
    CSI 1.87
    rCSI 4.88%
    PRS 66.72
  • activated type II NK T cell CL0000931
    CSI 1.86
    rCSI 2.09%
    PRS 79.94
  • mucous neck cell CL0000651
    CSI 1.86
    rCSI 2.68%
    PRS 74.23
  • Bergmann glial cell CL0000644
    CSI 1.85
    rCSI 2.53%
    PRS 56.75
  • radial glial cell CL0000681
    CSI 1.85
    rCSI 2.57%
    PRS 62.18
  • lung endothelial cell CL1001567
    CSI 1.8
    rCSI 4.19%
    PRS 80.81
  • retinal pigment epithelial cell CL0002586
    CSI 1.79
    rCSI 3.56%
    PRS 61.08
  • fallopian tube secretory epithelial cell CL4030006
    CSI 1.79
    rCSI 1.73%
    PRS 63.72
  • adventitial cell CL0002503
    CSI 1.78
    rCSI 4.26%
    PRS 71.9
  • pvalb GABAergic cortical interneuron CL4023018
    CSI 1.78
    rCSI 2.21%
    PRS 43.25
  • hepatic stellate cell CL0000632
    CSI 1.76
    rCSI 6.59%
    PRS 55.56
  • mesodermal cell CL0000222
    CSI 1.72
    rCSI 2.07%
    PRS 61.75
  • vascular associated smooth muscle cell CL0000359
    CSI 1.7
    rCSI 5.52%
    PRS 63.68
  • pancreatic D cell CL0000173
    CSI 1.69
    rCSI 1.66%
    PRS 66.36
  • epicardial adipocyte CL1000309
    CSI 1.68
    rCSI 5.48%
    PRS 63.68
  • endothelial cell of vascular tree CL0002139
    CSI 1.67
    rCSI 9.15%
    PRS 62.2
  • ependymal cell CL0000065
    CSI 1.67
    rCSI 3.39%
    PRS 42.76
  • glandular epithelial cell CL0000150
    CSI 1.67
    rCSI 4.4%
    PRS 81.31
  • rod bipolar cell CL0000751
    CSI 1.67
    rCSI 3%
    PRS 56.81
  • Schwann cell CL0002573
    CSI 1.63
    rCSI 4.62%
    PRS 61.57
  • stromal cell CL0000499
    CSI 1.6
    rCSI 4.5%
    PRS 60.33
  • cardiac endothelial cell CL0010008
    CSI 1.59
    rCSI 6.42%
    PRS 62.41
  • colon epithelial cell CL0011108
    CSI 1.58
    rCSI 1.66%
    PRS 60.17
  • transit amplifying cell of colon CL0009011
    CSI 1.56
    rCSI 1.83%
    PRS 65.99
  • cerebral cortex GABAergic interneuron CL0010011
    CSI 1.55
    rCSI 4.58%
    PRS 66.6
  • pluripotent stem cell CL0002248
    CSI 0.1
    rCSI 3.9%
    PRS 82.4%
  • central nervous system neuron CL2000029
    CSI 0.2
    rCSI 1.3%
    PRS 50.1%
  • mesenchymal stem cell CL0000134
    CSI 0.2
    rCSI 2.5%
    PRS 75.6%
  • intestinal crypt stem cell of colon CL0009043
    CSI 0.2
    rCSI 1.7%
    PRS 79.2%
  • vein endothelial cell of respiratory system CL4033008
    CSI 0.2
    rCSI 1.7%
    PRS 76.1%
  • respiratory goblet cell CL0002370
    CSI 0.3
    rCSI 3.5%
    PRS 77.9%
  • tracheobronchial serous cell CL0019001
    CSI 0.3
    rCSI 1.4%
    PRS 76.2%
  • kidney loop of Henle thick ascending limb epithelial cell CL1001106
    CSI 0.4
    rCSI 3.7%
    PRS 60.4%
  • flat midget bipolar cell CL4033033
    CSI 0.4
    rCSI 3.1%
    PRS 56.4%
  • hepatic pit cell CL2000054
    CSI 0.5
    rCSI 6.1%
    PRS 88.2%
  • pancreatic stellate cell CL0002410
    CSI 0.5
    rCSI 2.6%
    PRS 72.3%
  • blood vessel smooth muscle cell CL0019018
    CSI 0.5
    rCSI 3.9%
    PRS 56.9%
  • cerebral cortex pyramidal neuron CL4023111
    CSI 0.5
    rCSI 3.1%
    PRS 77.3%
  • serous secreting cell of bronchus submucosal gland CL4033005
    CSI 0.5
    rCSI 2.9%
    PRS 82.1%
  • diffuse bipolar 3a cell CL4033029
    CSI 0.6
    rCSI 4.0%
    PRS 58.8%
  • diffuse bipolar 2 cell CL4033028
    CSI 0.6
    rCSI 4.9%
    PRS 59.9%
  • enteroglial cell CL4040002
    CSI 0.7
    rCSI 3.7%
    PRS 68.6%
  • retinal ganglion cell CL0000740
    CSI 0.7
    rCSI 1.6%
    PRS 49.6%
  • eosinophil CL0000771
    CSI 0.7
    rCSI 4.7%
    PRS 88.8%
  • chandelier pvalb GABAergic cortical interneuron CL4023036
    CSI 0.7
    rCSI 2.3%
    PRS 49.2%
  • medium spiny neuron CL1001474
    CSI 0.8
    rCSI 6.5%
    PRS 50.7%
  • diffuse bipolar 1 cell CL4033027
    CSI 0.8
    rCSI 5.8%
    PRS 56.9%
  • GABAergic neuron CL0000617
    CSI 0.8
    rCSI 2.7%
    PRS 48.5%
  • stromal cell of ovary CL0002132
    CSI 0.8
    rCSI 2.2%
    PRS 75.9%
  • mammary gland epithelial cell CL0002327
    CSI 0.8
    rCSI 2.8%
    PRS 76.1%
  • glial cell CL0000125
    CSI 0.8
    rCSI 3.1%
    PRS 54.3%
  • H2 horizontal cell CL0004218
    CSI 0.8
    rCSI 4.1%
    PRS 60.7%
  • L4 intratelencephalic projecting glutamatergic neuron CL4030063
    CSI 0.8
    rCSI 2.0%
    PRS 50.8%
  • ciliated columnar cell of tracheobronchial tree CL0002145
    CSI 0.9
    rCSI 1.9%
    PRS 59.9%
  • smooth muscle cell of the pulmonary artery CL0002591
    CSI 0.9
    rCSI 6.7%
    PRS 69.8%
  • lung ciliated cell CL1000271
    CSI 0.9
    rCSI 1.0%
    PRS 54.0%
  • sst GABAergic cortical interneuron CL4023017
    CSI 0.9
    rCSI 1.2%
    PRS 46.4%
  • endothelial cell of uterus CL0009095
    CSI 0.9
    rCSI 6.7%
    PRS 79.3%
  • parietal epithelial cell CL1000452
    CSI 0.9
    rCSI 2.5%
    PRS 54.5%
  • syncytiotrophoblast cell CL0000525
    CSI 0.9
    rCSI 2.7%
    PRS 76.5%
  • glycinergic amacrine cell CL4030028
    CSI 1.0
    rCSI 2.5%
    PRS 60.7%
  • microcirculation associated smooth muscle cell CL0008035
    CSI 1.0
    rCSI 2.8%
    PRS 65.0%
  • IgG plasma cell CL0000985
    CSI 1.0
    rCSI 1.2%
    PRS 79.7%
  • foveolar cell of stomach CL0002179
    CSI 1.0
    rCSI 2.2%
    PRS 74.6%
  • late pro-B cell CL0002048
    CSI 1.0
    rCSI 2.6%
    PRS 85.9%
  • mesangial cell CL0000650
    CSI 1.0
    rCSI 4.2%
    PRS 75.6%
  • neuroplacodal cell CL0000032
    CSI 1.0
    rCSI 9.5%
    PRS 73.2%
  • forebrain radial glial cell CL0013000
    CSI 1.1
    rCSI 3.4%
    PRS 68.4%
  • pancreatic ductal cell CL0002079
    CSI 1.1
    rCSI 2.1%
    PRS 66.7%
  • tracheobronchial smooth muscle cell CL0019019
    CSI 1.1
    rCSI 1.9%
    PRS 71.8%
  • alveolar macrophage CL0000583
    CSI 1.1
    rCSI 1.8%
    PRS 69.1%
  • small intestine goblet cell CL1000495
    CSI 1.1
    rCSI 2.4%
    PRS 71.6%
  • placental villous trophoblast CL2000060
    CSI 1.1
    rCSI 1.7%
    PRS 62.1%
  • podocyte CL0000653
    CSI 1.1
    rCSI 5.0%
    PRS 63.4%
  • retinal cone cell CL0000573
    CSI 1.2
    rCSI 1.9%
    PRS 53.1%
  • lamp5 GABAergic cortical interneuron CL4023011
    CSI 1.2
    rCSI 1.9%
    PRS 45.1%
  • keratocyte CL0002363
    CSI 1.2
    rCSI 2.8%
    PRS 70.9%
  • chondrocyte CL0000138
    CSI 1.2
    rCSI 1.9%
    PRS 56.0%
  • endothelial cell of lymphatic vessel CL0002138
    CSI 1.2
    rCSI 2.3%
    PRS 76.9%
  • innate lymphoid cell CL0001065
    CSI 1.2
    rCSI 2.4%
    PRS 64.8%
  • acinar cell CL0000622
    CSI 1.2
    rCSI 1.7%
    PRS 75.4%
  • corneal epithelial cell CL0000575
    CSI 1.2
    rCSI 3.4%
    PRS 75.4%
  • OFFx cell CL4033036
    CSI 1.2
    rCSI 5.8%
    PRS 58.1%
  • diffuse bipolar 6 cell CL4033032
    CSI 1.2
    rCSI 6.5%
    PRS 57.7%
  • T-helper 1 cell CL0000545
    CSI 1.3
    rCSI 2.3%
    PRS 84.6%
  • renal interstitial pericyte CL1001318
    CSI 1.3
    rCSI 3.6%
    PRS 59.1%
  • intestinal crypt stem cell of small intestine CL0009017
    CSI 1.3
    rCSI 3.5%
    PRS 70.7%
  • contractile cell CL0000183
    CSI 1.3
    rCSI 3.9%
    PRS 62.2%
  • BEST4+ enteroycte CL4030026
    CSI 1.3
    rCSI 1.7%
    PRS 65.4%
  • renal beta-intercalated cell CL0002201
    CSI 1.3
    rCSI 3.2%
    PRS 64.3%
  • type B pancreatic cell CL0000169
    CSI 1.3
    rCSI 3.0%
    PRS 61.7%
  • macroglial cell CL0000126
    CSI 1.3
    rCSI 3.4%
    PRS 62.7%
  • alveolar type 1 fibroblast cell CL4028004
    CSI 1.3
    rCSI 1.5%
    PRS 67.5%
  • cardiac neuron CL0010022
    CSI 1.3
    rCSI 4.3%
    PRS 60.7%
  • CD1c-positive myeloid dendritic cell CL0002399
    CSI 1.4
    rCSI 1.7%
    PRS 72.7%
  • epithelial cell of proximal tubule CL0002306
    CSI 1.4
    rCSI 3.4%
    PRS 56.9%
  • ionocyte CL0005006
    CSI 1.4
    rCSI 1.5%
    PRS 63.4%
  • cerebellar granule cell CL0001031
    CSI 1.4
    rCSI 2.1%
    PRS 56.9%
  • glioblast CL0000030
    CSI 1.4
    rCSI 2.3%
    PRS 56.1%
  • astrocyte of the cerebral cortex CL0002605
    CSI 1.5
    rCSI 3.3%
    PRS 45.8%
  • cardiac muscle cell CL0000746
    CSI 1.5
    rCSI 2.2%
    PRS 53.2%
  • transit amplifying cell CL0009010
    CSI 1.5
    rCSI 2.3%
    PRS 76.7%
  • VIP GABAergic cortical interneuron CL4023016
    CSI 1.5
    rCSI 1.8%
    PRS 44.9%
  • endocardial cell CL0002350
    CSI 1.5
    rCSI 7.3%
    PRS 62.0%
  • enteric smooth muscle cell CL0002504
    CSI 1.5
    rCSI 2.2%
    PRS 65.8%
  • OFF-bipolar cell CL0000750
    CSI 1.5
    rCSI 2.1%
    PRS 70.0%
  • basal cell CL0000646
    CSI 1.5
    rCSI 2.0%
    PRS 64.1%
  • lung pericyte CL0009089
    CSI 1.5
    rCSI 4.0%
    PRS 72.4%
  • lung neuroendocrine cell CL1000223
    CSI 1.5
    rCSI 2.3%
    PRS 68.9%
  • extravillous trophoblast CL0008036
    CSI 1.6
    rCSI 1.9%
    PRS 60.5%
  • lung secretory cell CL1000272
    CSI 1.6
    rCSI 3.8%
    PRS 62.2%
  • cerebral cortex GABAergic interneuron CL0010011
    CSI 1.6
    rCSI 4.6%
    PRS 66.6%
  • transit amplifying cell of colon CL0009011
    CSI 1.6
    rCSI 1.8%
    PRS 66.0%
  • colon epithelial cell CL0011108
    CSI 1.6
    rCSI 1.7%
    PRS 60.2%
  • cardiac endothelial cell CL0010008
    CSI 1.6
    rCSI 6.4%
    PRS 62.4%
  • stromal cell CL0000499
    CSI 1.6
    rCSI 4.5%
    PRS 60.3%
  • Schwann cell CL0002573
    CSI 1.6
    rCSI 4.6%
    PRS 61.6%
  • rod bipolar cell CL0000751
    CSI 1.7
    rCSI 3.0%
    PRS 56.8%
  • glandular epithelial cell CL0000150
    CSI 1.7
    rCSI 4.4%
    PRS 81.3%
  • ependymal cell CL0000065
    CSI 1.7
    rCSI 3.4%
    PRS 42.8%
  • endothelial cell of vascular tree CL0002139
    CSI 1.7
    rCSI 9.2%
    PRS 62.2%
  • epicardial adipocyte CL1000309
    CSI 1.7
    rCSI 5.5%
    PRS 63.7%
  • pancreatic D cell CL0000173
    CSI 1.7
    rCSI 1.7%
    PRS 66.4%
  • vascular associated smooth muscle cell CL0000359
    CSI 1.7
    rCSI 5.5%
    PRS 63.7%
  • mesodermal cell CL0000222
    CSI 1.7
    rCSI 2.1%
    PRS 61.8%

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Network Configuration

Explore relationships of the current gene. Select an Interaction Source: 'ONTOLOGY' for shared pathways (GO/Reactome) or 'STRING' for protein-protein interactions. Further refine by selecting context genes and comparing Cell Significance Index (CSI) scores between baseline and target cell types and their specific contexts.

Comma-separated if multiple.
Comma-separated if multiple.

Legend:
  • Query Gene
  • Node Color (Target Cell CSI, relative to current network):
    • Very High
    • High
    • Medium
    • Low
    • Very Low
    • CSI N/A
  • Node Size: Proportional to Target Cell CSI magnitude
  • STRING PPI Edge
  • Shared Pathway Edge (ONTOLOGY)

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Other Information

This section provides additional information about the gene, including a description generated by an AI language model and details about associated proteins.

## Summary [TLE1](/details-gene/7088) (Transducin Like Enhancer Of Split 1) is a protein-coding gene located on chromosome 9q21.32. It encodes a transcriptional corepressor that is a human homolog of the Drosophila Groucho protein. As a corepressor, [TLE1](/details-gene/7088) does not bind DNA directly but is recruited by various DNA-binding transcription factors to mediate gene silencing. It is a critical regulator in several fundamental signaling pathways, including Wnt and Notch, which are essential for embryonic development, cell fate determination, and tissue homeostasis. Its expression profile is widespread, with significant expression observed in diverse cell types such as epithelial cells of the kidney, developing neural cells, and progenitors of the lymphoid lineage, highlighting its broad importance across multiple organ systems. The clinical association of [TLE1](/details-gene/7088) is documented in OMIM entry [600189](https://omim.org/entry/600189). ## Cellular Roles and Expression Landscape The expression profile of [TLE1](/details-gene/7088) indicates a fundamental role in cell differentiation and function across various lineages. **Overall**, the gene shows high significance in a diverse set of cell types, suggesting it is not restricted to a single physiological system but rather acts as a core component of cellular regulation. Its highest significance is observed in specialized epithelial cells, such as [kidney loop of Henle thin descending limb epithelial cell](/details-cell/CL1001111), [conjunctival epithelial cell](/details-cell/CL1000432), and [cholangiocyte](/details-cell/CL1000488), as well as in [hepatocyte](/details-cell/CL0000182). This pattern suggests a crucial role in the maintenance and function of these terminally differentiated tissues. Concurrently, [TLE1](/details-gene/7088) is highly significant in progenitor and developing cell populations. It is a key marker in cells of the developing nervous system, including [neural crest cell](/details-cell/CL0011012), [L5 extratelencephalic projecting glutamatergic cortical neuron](/details-cell/CL4023041), [neuroblast (sensu Vertebrata)](/details-cell/CL0000031), and [neural progenitor cell](/details-cell/CL0011020). This is consistent with its established role as a corepressor in Notch signaling, a pathway essential for neurogenesis ([Link](https://pubmed.ncbi.nlm.nih.gov/9874198/)). Furthermore, the gene plays a prominent role in hematopoiesis and immunity. It is highly expressed in lymphoid progenitors, including [early lymphoid progenitor](/details-cell/CL0000936) and [pro-B cell](/details-cell/CL0000826), as well as in mature immune cells like [group 3 innate lymphoid cell](/details-cell/CL0001071) and [mature B cell](/details-cell/CL0000785). This suggests that [TLE1](/details-gene/7088) is involved in both the commitment to the lymphoid lineage and the function of mature lymphocytes, likely by repressing genes associated with alternative developmental fates ([Link](https://pubmed.ncbi.nlm.nih.gov/9751710/)). ## Pathways and Molecular Function [TLE1](/details-gene/7088) functions primarily as a transcriptional corepressor, as annotated by the Gene Ontology term '[transcription corepressor activity](/details-go/GO:0003714)'. It achieves this by localizing to the '[Nucleus](/details-go/GO:0005634)' and forming part of a '[transcription regulator complex](/details-go/GO:0005667)'. Its mechanism involves binding to other proteins, particularly DNA-binding transcription factors ([GO:0140297](https://www.ebi.ac.uk/QuickGO/term/GO:0140297)), rather than directly to DNA. Early research identified its interaction with HES-1 and other basic helix-loop-helix proteins via the WRPW motif, establishing it as a key mediator of their repressive functions ([Link](https://doi.org/10.1006/bbrc.1996.0959), [Link](https://doi.org/10.1128/mcb.16.6.2670)). The functional annotations highlight its central role in major developmental signaling pathways. [TLE1](/details-gene/7088) is a key negative regulator of the '[Wnt signaling pathway](/details-go/GO:0016055)', as evidenced by its involvement in Reactome pathways such as '[Repression of wnt target genes](/details-reactome/R-HSA-4641265)' and '[Deactivation of the beta-catenin transactivating complex](/details-reactome/R-HSA-3769402)'. It functions by interacting with TCF/LEF transcription factors to repress Wnt target genes, a mechanism critical for controlling cell proliferation and differentiation ([Link](https://pubmed.ncbi.nlm.nih.gov/9751710/)). Additionally, [TLE1](/details-gene/7088) is integral to '[Signaling by notch](/details-reactome/R-HSA-157118)', where it acts as a corepressor for the Hairy/Enhancer of split (HES) family of transcription factors, which are primary effectors of the Notch pathway. This role is critical for processes like '[Animal organ morphogenesis](/details-go/GO:0009887)' and is particularly important during neuronal development. ## Research Directions The broad yet significant expression of [TLE1](/details-gene/7088) across progenitor and differentiated cell types suggests it is a master regulator whose context-specific interactions dictate cellular outcomes. Its dysregulation is implicated in developmental disorders and cancer, making it a subject of significant research interest. Based on the available data, several testable hypotheses can be proposed: 1. Given its high significance in both [early lymphoid progenitor](/details-cell/CL0000936) cells and mature lymphocyte populations like [group 3 innate lymphoid cell](/details-cell/CL0001071), [TLE1](/details-gene/7088) likely acts as a gatekeeper for lymphoid lineage fidelity. Its loss may lead to lineage plasticity, allowing lymphoid progenitors to adopt myeloid or other fates due to the de-repression of inappropriate genetic programs. 2. In the context of the kidney, the high expression of [TLE1](/details-gene/7088) in [kidney loop of Henle thin descending limb epithelial cell](/details-cell/CL1001111) suggests a role in maintaining the specialized, terminally differentiated state of these cells. Its function may involve repressing proliferative pathways like Wnt signaling to prevent dedifferentiation and maintain tissue architecture. To test the first hypothesis regarding lymphoid lineage fidelity, a compelling experimental approach would be: * **Experiment:** Generate a conditional knockout mouse model with [TLE1](/details-gene/7088) deleted specifically in hematopoietic stem and progenitor cells (e.g., using a Vav1-Cre driver). Perform single-cell RNA sequencing (scRNA-seq) and Assay for Transposase-Accessible Chromatin using sequencing (ATAC-seq) on bone marrow and spleen cells from these mice compared to wild-type controls. * **Expected Outcome:** The analysis would be expected to reveal an altered landscape of hematopoietic progenitors, with a potential reduction in committed lymphoid populations and the emergence of hybrid or ambiguous cell states co-expressing lymphoid and myeloid markers. ATAC-seq would identify regions of chromatin that become ectopically accessible, likely at the promoters of non-lymphoid genes normally repressed by TLE1-containing complexes. **Therapeutic Potential:** As a transcriptional corepressor, [TLE1](/details-gene/7088) itself is a difficult therapeutic target. However, its function is mediated through protein-protein interactions with transcription factors that are often implicated in cancer (e.g., TCF/LEF in colorectal cancer). Therefore, [TLE1](/details-gene/7088) represents a potential target for **inhibition** via small molecules designed to disrupt these specific interactions. Such an approach could reactivate tumor suppressor genes that are silenced by aberrant TLE1 activity. Due to its widespread expression and critical roles in normal tissue homeostasis, a key challenge would be developing inhibitors specific to the oncogenic TLE1 complex to achieve a suitable therapeutic window and avoid systemic toxicity.

Genular Protein ID: 476456720

Symbol: TLE1_HUMAN

Name: Transducin-like enhancer protein 1

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 1303260

Title: Human homologs of a Drosophila enhancer of split gene product define a novel family of nuclear proteins.

PubMed ID: 1303260

DOI: 10.1038/ng1092-119

PubMed ID: 14702039

Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.

PubMed ID: 14702039

DOI: 10.1038/ng1285

PubMed ID: 15164053

Title: DNA sequence and analysis of human chromosome 9.

PubMed ID: 15164053

DOI: 10.1038/nature02465

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 10748198

Title: Transducin-like enhancer of split proteins, the human homologs of Drosophila groucho, interact with hepatic nuclear factor 3beta.

PubMed ID: 10748198

DOI: 10.1074/jbc.m910211199

PubMed ID: 8687460

Title: Molecular interaction between TLE1 and the carboxyl-terminal domain of HES-1 containing the WRPW motif.

PubMed ID: 8687460

DOI: 10.1006/bbrc.1996.0959

PubMed ID: 8649374

Title: The WRPW motif of the hairy-related basic helix-loop-helix repressor proteins acts as a 4-amino-acid transcription repression and protein-protein interaction domain.

PubMed ID: 8649374

DOI: 10.1128/mcb.16.6.2670

PubMed ID: 9334241

Title: The Groucho/transducin-like enhancer of split transcriptional repressors interact with the genetically defined amino-terminal silencing domain of histone H3.

PubMed ID: 9334241

DOI: 10.1074/jbc.272.42.26604

PubMed ID: 9874198

Title: Transducin-like Enhancer of split 2, a mammalian homologue of Drosophila Groucho, acts as a transcriptional repressor, interacts with Hairy/Enhancer of split proteins, and is expressed during neuronal development.

PubMed ID: 9874198

DOI: 10.1046/j.1432-1327.1998.2580339.x

PubMed ID: 9751710

Title: Transcriptional repression by AML1 and LEF-1 is mediated by the TLE/Groucho corepressors.

PubMed ID: 9751710

DOI: 10.1073/pnas.95.20.11590

PubMed ID: 9854018

Title: Groucho/transducin-like enhancer of split (TLE) family members interact with the yeast transcriptional co-repressor SSN6 and mammalian SSN6-related proteins: implications for evolutionary conservation of transcription repression mechanisms.

PubMed ID: 9854018

DOI: 10.1042/bj3370013

PubMed ID: 10660609

Title: Inhibition of nuclear factor-kappaB-mediated transcription by association with the amino-terminal enhancer of split, a Groucho-related protein lacking WD40 repeats.

PubMed ID: 10660609

DOI: 10.1074/jbc.275.6.4383

PubMed ID: 11731482

Title: Temporal regulation of a paired-like homeodomain repressor/TLE corepressor complex and a related activator is required for pituitary organogenesis.

PubMed ID: 11731482

DOI: 10.1101/gad.932601

PubMed ID: 12397081

Title: A role for cell cycle-regulated phosphorylation in Groucho-mediated transcriptional repression.

PubMed ID: 12397081

DOI: 10.1074/jbc.m111660200

PubMed ID: 14651967

Title: Identification of PNRC2 and TLE1 as activation function-1 cofactors of the orphan nuclear receptor ERRgamma.

PubMed ID: 14651967

DOI: 10.1016/j.bbrc.2003.11.025

PubMed ID: 12441302

Title: Six3 and Six6 activity is modulated by members of the groucho family.

PubMed ID: 12441302

DOI: 10.1242/dev.00185

PubMed ID: 18254933

Title: The Groucho/TLE/Grg family of transcriptional co-repressors.

PubMed ID: 18254933

DOI: 10.1186/gb-2008-9-1-205

PubMed ID: 19413330

Title: Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach.

PubMed ID: 19413330

DOI: 10.1021/ac9004309

PubMed ID: 19690332

Title: Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions.

PubMed ID: 19690332

DOI: 10.1126/scisignal.2000007

PubMed ID: 21429299

Title: EphrinB1 interacts with the transcriptional co-repressor Groucho/xTLE4.

PubMed ID: 21429299

DOI: 10.5483/bmbrep.2011.44.3.199

PubMed ID: 21269460

Title: Initial characterization of the human central proteome.

PubMed ID: 21269460

DOI: 10.1186/1752-0509-5-17

PubMed ID: 21406692

Title: System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation.

PubMed ID: 21406692

DOI: 10.1126/scisignal.2001570

PubMed ID: 22304967

Title: XIAP monoubiquitylates Groucho/TLE to promote canonical Wnt signaling.

PubMed ID: 22304967

DOI: 10.1016/j.molcel.2011.12.032

PubMed ID: 12057191

Title: Crystal structure of the C-terminal WD40 repeat domain of the human Groucho/TLE1 transcriptional corepressor.

PubMed ID: 12057191

DOI: 10.1016/s0969-2126(02)00768-2

Sequence Information:

  • Length: 770
  • Mass: 83201
  • Checksum: 695FD1A37410EFE5
  • Sequence:
  • MFPQSRHPTP HQAAGQPFKF TIPESLDRIK EEFQFLQAQY HSLKLECEKL ASEKTEMQRH 
    YVMYYEMSYG LNIEMHKQTE IAKRLNTICA QVIPFLSQEH QQQVAQAVER AKQVTMAELN 
    AIIGQQQLQA QHLSHGHGPP VPLTPHPSGL QPPGIPPLGG SAGLLALSSA LSGQSHLAIK 
    DDKKHHDAEH HRDREPGTSN SLLVPDSLRG TDKRRNGPEF SNDIKKRKVD DKDSSHYDSD 
    GDKSDDNLVV DVSNEDPSSP RASPAHSPRE NGIDKNRLLK KDASSSPAST ASSASSTSLK 
    SKEMSLHEKA STPVLKSSTP TPRSDMPTPG TSATPGLRPG LGKPPAIDPL VNQAAAGLRT 
    PLAVPGPYPA PFGMVPHAGM NGELTSPGAA YASLHNMSPQ MSAAAAAAAV VAYGRSPMVG 
    FDPPPHMRVP TIPPNLAGIP GGKPAYSFHV TADGQMQPVP FPPDALIGPG IPRHARQINT 
    LNHGEVVCAV TISNPTRHVY TGGKGCVKVW DISHPGNKSP VSQLDCLNRD NYIRSCKLLP 
    DGCTLIVGGE ASTLSIWDLA APTPRIKAEL TSSAPACYAL AISPDSKVCF SCCSDGNIAV 
    WDLHNQTLVR QFQGHTDGAS CIDISNDGTK LWTGGLDNTV RSWDLREGRQ LQQHDFTSQI 
    FSLGYCPTGE WLAVGMESSN VEVLHVNKPD KYQLHLHESC VLSLKFAYCG KWFVSTGKDN 
    LLNAWRTPYG ASIFQSKESS SVLSCDISVD DKYIVTGSGD KKATVYEVIY

Genular Protein ID: 570479175

Symbol: Q59EF7_HUMAN

Name: N/A

UniProtKB Accession Codes:

Database IDs:

Sequence Information:

  • Length: 636
  • Mass: 68167
  • Checksum: 43EDDF601FE5A627
  • Sequence:
  • FSSAGLKLEI DRRIELPGNR APAAARAMFP QSRHPTPHQA AGQPFKFTIP ESLDRIKEEF 
    QFLQAQYHSL KLECEKLASE KTEMQRHYVM YYEMSYGLNI EMHKQTEIAK RLNTICAQVI 
    PFLSQEHQQQ VAQAVERAKQ VTMAELNAII GQQQLQAQHL SHGHGPPVPL TPHPSGLQPP 
    GIPPLGGSAG LLALSSALSG QSHLAIKDDK KHHDAEHHRD REPGTSNSLL VPDSLRGTDK 
    RRNGPEFSND IKKRKVDDKD SSHYDSDGDK SDDNLVVDVS NEDPSSPRAS PAHSPRENGI 
    DKNRLLKKDA SSSPASTASS ASSTSLKSKE MSLHEKASTP VLKSSTPTPR SDMPTPGTSA 
    TPGLRPGLGK PPAIDPLVNQ AAGLRTPLAV PGPYPAPFGM VPHAGMNGEL TSPGAAYASL 
    HNMSPQMSAA AAAAAVVAYG RSPMVGFDPP PHMRVPTIPP NLAGIPGGKP AYSFHVTADG 
    QMQPVPFPPD ALIGPGIPRH ARQINTLNHG EVVCAVTISN PTRHVYTGGK GCVKVWDISH 
    PGNKSPVSQL DCLNRDNYIR SCKLLPDGCT LIVGGEASTL SIWDLAAPTP RIKAELTSSA 
    PACYALAISP DSKVCFSCCS DGNIAVWDLY NQTLVR

Genular Protein ID: 1409467347

Symbol: B4DEF9_HUMAN

Name: N/A

UniProtKB Accession Codes:

Database IDs:

Sequence Information:

  • Length: 755
  • Mass: 81713
  • Checksum: 97133F07AC2F34D7
  • Sequence:
  • MFPQSRHPTP HQAAGQPFKF TIPESLDRIK EEFQFLQAQY HSLKLECEKL ASEKTEMQRH 
    YVMYYEMSYG LNIEMHKQTE IAKRLNTICA QVIPFLSQEH QQQVAQAVER AKQVTMAELN 
    AIIGQQQLQA QHLSHGHGPP VPLTPHPSGL QPPGIPPLGG SAGLLALSSA LSGQSHLAIK 
    DDKKHHDAEH HRDREPGTSN SLLVPDSLRG TDKRRNGPEF SNDIKKRKVD DKDSSHYDSD 
    GDKSDDNLVV DVSNEDPSSP RASPAHSPRE NGIDKNRLLK KDASSSPAST ASSASSTSLK 
    SKEMSLHEKA STPVLKSSTP TPRSDMPTPG TSATPGLRPA AGLRTPLAVP GPYPAPFGMV 
    PHAGMNGELT SPGAAYASLH NMSPQMSAAA AAAAVVAYGR SPMVGFDPPP HMRVPTIPPN 
    LAGIPGGKPA YSFHVTADGQ MQPVPFPPDA LIGPGIPRHA RQINTLNHGE VVCAVTISNP 
    TRHVYTGGKG CVKVWDISHP GNKSPVSQLD CLNRDNYIRS CKLLPDGCTL IVGGEASTLS 
    IWDLAAPTPR IKAELTSSAP ACYALAISPD SKVCFSCCSD GNIAVWDLHN QTLVRQFQGH 
    TDGASCIDIS NDGTKLWTGG PDNTVRSWDL REGRQLQQHD FTSQIFSLGY CPTGEWLAVG 
    MESSNVEVLH VNKPDKYQLH LHESCVLSLK FAYCGKWFVS TGKDNLLNAW RTPYGASIFQ 
    SKESSSVLSC DISVDDKYIV TGSGDKKATV YEVIY