Details for: TRAF1
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: polychromatophilic erythroblast (CL0000550)
Fold Change: 61.3326
Cell Significance Index: -9.5400 - Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
Fold Change: 37.5330
Cell Significance Index: -9.5200 - Cell Name: mucosal type mast cell (CL0000485)
Fold Change: 22.5719
Cell Significance Index: -9.1700 - Cell Name: ciliated cell of the bronchus (CL0002332)
Fold Change: 9.9189
Cell Significance Index: -9.4700 - Cell Name: orthochromatic erythroblast (CL0000552)
Fold Change: 7.7294
Cell Significance Index: -9.5300 - Cell Name: monocyte-derived dendritic cell (CL0011031)
Fold Change: 2.5530
Cell Significance Index: 43.8600 - Cell Name: stromal cell of bone marrow (CL0010001)
Fold Change: 2.4303
Cell Significance Index: -9.5900 - Cell Name: CD8-alpha-beta-positive, alpha-beta intraepithelial T cell (CL0000796)
Fold Change: 2.4077
Cell Significance Index: -6.4500 - Cell Name: CD8-positive, alpha-beta regulatory T cell (CL0000795)
Fold Change: 2.1781
Cell Significance Index: -6.6900 - Cell Name: epidermal Langerhans cell (CL0002457)
Fold Change: 1.7591
Cell Significance Index: -3.8500 - Cell Name: CD4-positive, alpha-beta memory T cell, CD45RO-positive (CL0001204)
Fold Change: 1.1980
Cell Significance Index: 35.1900 - Cell Name: DN3 thymocyte (CL0000807)
Fold Change: 1.0173
Cell Significance Index: 10.2000 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: 0.7977
Cell Significance Index: 21.3800 - Cell Name: enteroendocrine cell of colon (CL0009042)
Fold Change: 0.4173
Cell Significance Index: 79.4100 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: 0.3168
Cell Significance Index: 14.8900 - Cell Name: colon goblet cell (CL0009039)
Fold Change: 0.2921
Cell Significance Index: 28.9000 - Cell Name: tonsil germinal center B cell (CL2000006)
Fold Change: 0.2897
Cell Significance Index: 34.1600 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 0.2473
Cell Significance Index: 223.2800 - Cell Name: transit amplifying cell of small intestine (CL0009012)
Fold Change: 0.1914
Cell Significance Index: 3.9700 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 0.1467
Cell Significance Index: 23.8700 - Cell Name: lactocyte (CL0002325)
Fold Change: 0.1083
Cell Significance Index: 13.9900 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 0.0894
Cell Significance Index: 9.7300 - Cell Name: fibroblast of mammary gland (CL0002555)
Fold Change: 0.0851
Cell Significance Index: 2.4400 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 0.0755
Cell Significance Index: 14.9800 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 0.0719
Cell Significance Index: 14.4200 - Cell Name: pancreatic endocrine cell (CL0008024)
Fold Change: 0.0696
Cell Significance Index: 7.9500 - Cell Name: basal cell of prostate epithelium (CL0002341)
Fold Change: 0.0691
Cell Significance Index: 1.8800 - Cell Name: lung endothelial cell (CL1001567)
Fold Change: 0.0427
Cell Significance Index: 2.2300 - Cell Name: odontoblast (CL0000060)
Fold Change: 0.0297
Cell Significance Index: 3.8100 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: 0.0269
Cell Significance Index: 0.7800 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 0.0188
Cell Significance Index: 6.7600 - Cell Name: early pro-B cell (CL0002046)
Fold Change: 0.0175
Cell Significance Index: 1.1300 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: 0.0107
Cell Significance Index: 20.0800 - Cell Name: fibro/adipogenic progenitor cell (CL0009099)
Fold Change: 0.0095
Cell Significance Index: 0.4800 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: 0.0057
Cell Significance Index: 0.4300 - Cell Name: anterior lens cell (CL0002223)
Fold Change: 0.0056
Cell Significance Index: 10.2800 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: 0.0022
Cell Significance Index: 3.3800 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: 0.0011
Cell Significance Index: 0.4900 - Cell Name: hair follicular keratinocyte (CL2000092)
Fold Change: -0.0010
Cell Significance Index: -0.4300 - Cell Name: medial ganglionic eminence derived interneuron (CL4023063)
Fold Change: -0.0014
Cell Significance Index: -0.0200 - Cell Name: microfold cell of epithelium of small intestine (CL1000353)
Fold Change: -0.0036
Cell Significance Index: -0.2500 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: -0.0037
Cell Significance Index: -2.3600 - Cell Name: pancreatic PP cell (CL0002275)
Fold Change: -0.0044
Cell Significance Index: -2.7600 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: -0.0054
Cell Significance Index: -7.4100 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0059
Cell Significance Index: -4.4000 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: -0.0085
Cell Significance Index: -0.5200 - Cell Name: cell in vitro (CL0001034)
Fold Change: -0.0090
Cell Significance Index: -4.9300 - Cell Name: enteroendocrine cell of small intestine (CL0009006)
Fold Change: -0.0092
Cell Significance Index: -0.2300 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: -0.0101
Cell Significance Index: -7.6100 - Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
Fold Change: -0.0120
Cell Significance Index: -8.8100 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0121
Cell Significance Index: -6.8100 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: -0.0167
Cell Significance Index: -3.0100 - Cell Name: gut absorptive cell (CL0000677)
Fold Change: -0.0185
Cell Significance Index: -1.1100 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: -0.0204
Cell Significance Index: -2.9600 - Cell Name: CD4-positive, alpha-beta thymocyte (CL0000810)
Fold Change: -0.0209
Cell Significance Index: -0.3600 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.0216
Cell Significance Index: -6.2200 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: -0.0223
Cell Significance Index: -3.8000 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: -0.0246
Cell Significance Index: -3.3800 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.0254
Cell Significance Index: -5.3500 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: -0.0283
Cell Significance Index: -0.7900 - Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
Fold Change: -0.0298
Cell Significance Index: -0.6300 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: -0.0341
Cell Significance Index: -1.5500 - Cell Name: paneth cell of epithelium of small intestine (CL1000343)
Fold Change: -0.0342
Cell Significance Index: -0.7400 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: -0.0356
Cell Significance Index: -1.2500 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.0373
Cell Significance Index: -4.2700 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.0382
Cell Significance Index: -3.9000 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: -0.0460
Cell Significance Index: -5.6500 - Cell Name: epithelial cell of stomach (CL0002178)
Fold Change: -0.0696
Cell Significance Index: -8.1200 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: -0.0737
Cell Significance Index: -4.6500 - Cell Name: transit amplifying cell of colon (CL0009011)
Fold Change: -0.0752
Cell Significance Index: -2.4100 - Cell Name: preadipocyte (CL0002334)
Fold Change: -0.0807
Cell Significance Index: -1.5800 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: -0.0810
Cell Significance Index: -8.4300 - Cell Name: sebum secreting cell (CL0000317)
Fold Change: -0.0830
Cell Significance Index: -5.8700 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: -0.0961
Cell Significance Index: -7.1600 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: -0.1006
Cell Significance Index: -4.6900 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: -0.1163
Cell Significance Index: -7.8200 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: -0.1174
Cell Significance Index: -6.1000 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: -0.1214
Cell Significance Index: -6.8100 - Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
Fold Change: -0.1268
Cell Significance Index: -10.0400 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: -0.1311
Cell Significance Index: -8.0600 - Cell Name: Purkinje cell (CL0000121)
Fold Change: -0.1320
Cell Significance Index: -2.8900 - Cell Name: retinal rod cell (CL0000604)
Fold Change: -0.1325
Cell Significance Index: -1.5800 - Cell Name: BEST4+ enteroycte (CL4030026)
Fold Change: -0.1400
Cell Significance Index: -2.1100 - Cell Name: decidual cell (CL2000002)
Fold Change: -0.1633
Cell Significance Index: -2.6200 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: -0.1648
Cell Significance Index: -7.2900 - Cell Name: CD14-positive, CD16-negative classical monocyte (CL0002057)
Fold Change: -0.1726
Cell Significance Index: -3.1900 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: -0.1806
Cell Significance Index: -9.4800 - Cell Name: neutrophil progenitor cell (CL0000834)
Fold Change: -0.1809
Cell Significance Index: -4.8400 - Cell Name: direct pathway medium spiny neuron (CL4023026)
Fold Change: -0.1904
Cell Significance Index: -7.2100 - Cell Name: mature alpha-beta T cell (CL0000791)
Fold Change: -0.2182
Cell Significance Index: -1.1900 - Cell Name: astrocyte of the cerebral cortex (CL0002605)
Fold Change: -0.2232
Cell Significance Index: -3.8600 - Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
Fold Change: -0.2289
Cell Significance Index: -8.0200 - Cell Name: stratified epithelial cell (CL0000079)
Fold Change: -0.2310
Cell Significance Index: -8.4800 - Cell Name: skeletal muscle fiber (CL0008002)
Fold Change: -0.2334
Cell Significance Index: -6.0000 - Cell Name: mature T cell (CL0002419)
Fold Change: -0.2349
Cell Significance Index: -1.6900 - Cell Name: DN1 thymic pro-T cell (CL0000894)
Fold Change: -0.2353
Cell Significance Index: -2.4400 - Cell Name: endothelial cell of placenta (CL0009092)
Fold Change: -0.2400
Cell Significance Index: -1.4500 - Cell Name: neuron associated cell (CL0000095)
Fold Change: -0.2406
Cell Significance Index: -9.8600 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
Fold Change: -0.2477
Cell Significance Index: -8.1100 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: -0.2490
Cell Significance Index: -7.9300
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 2315030296
Symbol: TRAF1_HUMAN
Name: TNF receptor-associated factor 1
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 7859281
Title: The Epstein-Barr virus transforming protein LMP1 engages signaling proteins for the tumor necrosis factor receptor family.
PubMed ID: 7859281
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 17974005
Title: The full-ORF clone resource of the German cDNA consortium.
PubMed ID: 17974005
PubMed ID: 15164053
Title: DNA sequence and analysis of human chromosome 9.
PubMed ID: 15164053
DOI: 10.1038/nature02465
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 8069916
Title: A novel family of putative signal transducers associated with the cytoplasmic domain of the 75 kDa tumor necrosis factor receptor.
PubMed ID: 8069916
PubMed ID: 8710854
Title: I-TRAF is a novel TRAF-interacting protein that regulates TRAF-mediated signal transduction.
PubMed ID: 8710854
PubMed ID: 8627180
Title: T cell receptor-dependent cell death of T cell hybridomas mediated by the CD30 cytoplasmic domain in association with tumor necrosis factor receptor-associated factors.
PubMed ID: 8627180
PubMed ID: 9718306
Title: CD40-tumor necrosis factor receptor-associated factor (TRAF) interactions: regulation of CD40 signaling through multiple TRAF binding sites and TRAF hetero-oligomerization.
PubMed ID: 9718306
DOI: 10.1021/bi981067q
PubMed ID: 9705938
Title: Identification of CARDIAK, a RIP-like kinase that associates with caspase-1.
PubMed ID: 9705938
PubMed ID: 9642260
Title: RIP2 is a novel NF-kappaB-activating and cell death-inducing kinase.
PubMed ID: 9642260
PubMed ID: 9774460
Title: The TRAF family of signal transducers mediates NF-kappaB activation by the TRANCE receptor.
PubMed ID: 9774460
PubMed ID: 9607925
Title: CD28-independent, TRAF2-dependent costimulation of resting T cells by 4-1BB ligand.
PubMed ID: 9607925
PubMed ID: 9418902
Title: 4-1BB and Ox40 are members of a tumor necrosis factor (TNF)-nerve growth factor receptor subfamily that bind TNF receptor-associated factors and activate nuclear factor kappaB.
PubMed ID: 9418902
DOI: 10.1128/mcb.18.1.558
PubMed ID: 10037686
Title: Identification of a novel activation-inducible protein of the tumor necrosis factor receptor superfamily and its ligand.
PubMed ID: 10037686
PubMed ID: 10692572
Title: Caspase-induced inactivation of the anti-apoptotic TRAF1 during Fas ligand-mediated apoptosis.
PubMed ID: 10692572
PubMed ID: 10809768
Title: TAJ, a novel member of the tumor necrosis factor receptor family, activates the c-Jun N-terminal kinase pathway and mediates caspase-independent cell death.
PubMed ID: 10809768
PubMed ID: 10903733
Title: TNF receptor family member BCMA (B cell maturation) associates with TNF receptor-associated factor (TRAF) 1, TRAF2, and TRAF3 and activates NF-kappa B, elk-1, c-Jun N-terminal kinase, and p38 mitogen-activated protein kinase.
PubMed ID: 10903733
PubMed ID: 11313261
Title: RELT, a new member of the tumor necrosis factor receptor superfamily, is selectively expressed in hematopoietic tissues and activates transcription factor NF-kappaB.
PubMed ID: 11313261
PubMed ID: 11035039
Title: The ectodermal dysplasia receptor activates the nuclear factor-kappaB, JNK, and cell death pathways and binds to ectodysplasin A.
PubMed ID: 11035039
PubMed ID: 11907583
Title: TNF-RII and c-IAP1 mediate ubiquitination and degradation of TRAF2.
PubMed ID: 11907583
DOI: 10.1038/416345a
PubMed ID: 15383523
Title: TRAF3 forms heterotrimers with TRAF2 and modulates its ability to mediate NF-{kappa}B activation.
PubMed ID: 15383523
PubMed ID: 15468071
Title: Mass spectrometric analysis of tumor necrosis factor receptor-associated factor 1 ubiquitination mediated by cellular inhibitor of apoptosis 2.
PubMed ID: 15468071
PubMed ID: 16323247
Title: TNF receptor-associated factor-1 (TRAF1) negatively regulates Toll/IL-1 receptor domain-containing adaptor inducing IFN-beta (TRIF)-mediated signaling.
PubMed ID: 16323247
PubMed ID: 18429822
Title: Negative regulation of constitutive NF-kappaB and JNK signaling by PKN1-mediated phosphorylation of TRAF1.
PubMed ID: 18429822
PubMed ID: 19698991
Title: TNF receptor-associated factor 1 is a positive regulator of the NF-kappaB alternative pathway.
PubMed ID: 19698991
PubMed ID: 19287455
Title: Tumor necrosis factor receptor-associated factor-1 enhances proinflammatory TNF receptor-2 signaling and modifies TNFR1-TNFR2 cooperation.
PubMed ID: 19287455
DOI: 10.1038/onc.2009.29
PubMed ID: 20447407
PubMed ID: 19937093
Title: Ubiquitin ligase Smurf1 targets TRAF family proteins for ubiquitination and degradation.
PubMed ID: 19937093
PubMed ID: 20385093
Title: Crystal structures of the TRAF2: cIAP2 and the TRAF1: TRAF2: cIAP2 complexes: affinity, specificity, and regulation.
PubMed ID: 20385093
PubMed ID: 18987736
Title: DNA sequencing of a cytogenetically normal acute myeloid leukaemia genome.
PubMed ID: 18987736
DOI: 10.1038/nature07485
Sequence Information:
- Length: 416
- Mass: 46164
- Checksum: A956A123A40D284A
- Sequence:
MASSSGSSPR PAPDENEFPF GCPPTVCQDP KEPRALCCAG CLSENPRNGE DQICPKCRGE DLQSISPGSR LRTQEKAHPE VAEAGIGCPF AGVGCSFKGS PQSVQEHEVT SQTSHLNLLL GFMKQWKARL GCGLESGPMA LEQNLSDLQL QAAVEVAGDL EVDCYRAPCS ESQEELALQH FMKEKLLAEL EGKLRVFENI VAVLNKEVEA SHLALATSIH QSQLDRERIL SLEQRVVELQ QTLAQKDQAL GKLEQSLRLM EEASFDGTFL WKITNVTRRC HESACGRTVS LFSPAFYTAK YGYKLCLRLY LNGDGTGKRT HLSLFIVIMR GEYDALLPWP FRNKVTFMLL DQNNREHAID AFRPDLSSAS FQRPQSETNV ASGCPLFFPL SKLQSPKHAY VKDDTMFLKC IVETST
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.