Details for: TRAF5
Gene ID: 7188
Gene Type: Protein-coding - A gene that serves as a template for producing a messenger RNA (mRNA) molecule, which is then translated into a functional protein.
Symbol: TRAF5
Ensembl ID: ENSG00000082512
Description: TNF receptor associated factor 5
Selected Context(s): Overall
Cell Significance Landscape
Associated with
Significant Cells
Cell Significance Index (CSI) scores for the chosen context(s)
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CSI 13.49rCSI 10.61%PRS 86.25
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CSI 12.31rCSI 20.16%PRS 71.6
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CSI 11.35rCSI 8.41%PRS 75.55
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CSI 7.63rCSI 7.05%PRS 94.22
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CSI 7.53rCSI 5.66%PRS 87.13
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CSI 7.18rCSI 10.16%PRS 80.28
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CSI 6.77rCSI 6.96%PRS 91.75
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CSI 5.37rCSI 13.58%PRS 86.33
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CSI 4.95rCSI 4.16%PRS 92.97
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CSI 4.78rCSI 3.57%PRS 92.23
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CSI 4.37rCSI 3.84%PRS 86.44
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CSI 4.26rCSI 2.97%PRS 93.72
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CSI 4.08rCSI 6.23%PRS 85.1
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CSI 3.69rCSI 3.16%PRS 87.45
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CSI 3.68rCSI 3.23%PRS 88.33
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CSI 3.47rCSI 2.49%PRS 92.96
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CSI 3.44rCSI 4.6%PRS 80.12
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CSI 3.38rCSI 2.35%PRS 92.06
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CSI 3.36rCSI 1.98%PRS 94.8
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CSI 3.12rCSI 2.1%PRS 92.96
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CSI 3.12rCSI 2.52%PRS 89.87
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CSI 3.11rCSI 2.42%PRS 93.59
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CSI 3.07rCSI 4.94%PRS 65.83
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CSI 3.06rCSI 2.28%PRS 91.15
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CSI 2.94rCSI 7.08%PRS 92.87
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CSI 2.9rCSI 3.4%PRS 93.39
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CSI 2.78rCSI 2.84%PRS 90.49
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CSI 2.77rCSI 9.06%PRS 94.79
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CSI 2.71rCSI 2.02%PRS 92.96
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CSI 2.63rCSI 1.83%PRS 85.13
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CSI 2.58rCSI 5.89%PRS 82.5
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CSI 2.5rCSI 6.19%PRS 81.8
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CSI 2.44rCSI 2.17%PRS 79.55
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CSI 2.42rCSI 4.24%PRS 76.07
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CSI 2.33rCSI 1.77%PRS 92.57
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CSI 2.33rCSI 6.06%PRS 82.85
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CSI 2.3rCSI 1.53%PRS 84.22
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CSI 2.27rCSI 8.5%PRS 74.53
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CSI 2.25rCSI 18.27%PRS 76.3
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CSI 2.24rCSI 2.04%PRS 92.07
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CSI 2.21rCSI 5.72%PRS 77.34
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CSI 2.21rCSI 52.89%PRS 62.38
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CSI 2.19rCSI 5.78%PRS 87.9
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CSI 2.16rCSI 2.12%PRS 93.27
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CSI 2.15rCSI 1.94%PRS 79.87
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CSI 2.12rCSI 3.67%PRS 73.7
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CSI 2.12rCSI 9.34%PRS 70.35
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CSI 2.09rCSI 2.98%PRS 82.5
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CSI 2.03rCSI 2.72%PRS 94.39
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CSI 2.01rCSI 2.4%PRS 64.43
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CSI 1.91rCSI 3.78%PRS 89.18
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CSI 1.88rCSI 3.31%PRS 86.45
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CSI 1.87rCSI 1.62%PRS 90.13
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CSI 1.75rCSI 42.28%PRS 62.96
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CSI 1.72rCSI 2.13%PRS 82.46
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CSI 1.71rCSI 5.06%PRS 80.85
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CSI 1.71rCSI 3.76%PRS 85.21
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CSI 1.67rCSI 3.21%PRS 95.89
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CSI 1.61rCSI 4.6%PRS 95.62
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CSI 1.58rCSI 2.29%PRS 92.85
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CSI 1.56rCSI 6.09%PRS 94.54
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CSI 1.49rCSI 2.96%PRS 77.56
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CSI 1.45rCSI 3.07%PRS 91.35
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CSI 1.42rCSI 2.68%PRS 88.92
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CSI 1.37rCSI 2.42%PRS 63.78
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CSI 1.34rCSI 5.24%PRS 60.48
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CSI 1.32rCSI 3.42%PRS 95.08
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CSI 1.21rCSI 2.5%PRS 78.38
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CSI 1.11rCSI 2.45%PRS 67.94
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CSI 1.05rCSI 5.28%PRS 92.09
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CSI 0.99rCSI 1.67%PRS 64.34
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CSI 0.96rCSI 3.01%PRS 68.29
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CSI 0.93rCSI 3.38%PRS 94.04
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CSI 0.91rCSI 2.65%PRS 81.15
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CSI 0.91rCSI 2.71%PRS 90.29
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CSI 0.88rCSI 2.15%PRS 62.29
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CSI 0.73rCSI 1.86%PRS 72.46
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CSI 0.48rCSI 6.84%PRS 73.08
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CSI 0.24rCSI 1.35%PRS 84.54
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CSI 0.18rCSI 1.53%PRS 70.06
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Network Configuration
Explore relationships of the current gene. Select an Interaction Source: 'ONTOLOGY' for shared pathways (GO/Reactome) or 'STRING' for protein-protein interactions. Further refine by selecting context genes and comparing Cell Significance Index (CSI) scores between baseline and target cell types and their specific contexts.
Legend:
- Query Gene
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Node Color (Target Cell CSI, relative to current network):
- Very High
- High
- Medium
- Low
- Very Low
- CSI N/A
- Node Size: Proportional to Target Cell CSI magnitude
- STRING PPI Edge
- Shared Pathway Edge (ONTOLOGY)
Other Information
This section provides additional information about the gene, including a description generated by an AI language model and details about associated proteins.
Genular Protein ID: 194277036
Symbol: TRAF5_HUMAN
Name: TNF receptor-associated factor 5
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 9511754
Title: Cloning and characterization of a cDNA encoding the human homolog of tumor necrosis factor receptor-associated factor 5 (TRAF5).
PubMed ID: 9511754
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 16710414
Title: The DNA sequence and biological annotation of human chromosome 1.
PubMed ID: 16710414
DOI: 10.1038/nature04727
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 9177772
Title: Human TNF receptor-associated factor 5 (TRAF5): cDNA cloning, expression and assignment of the TRAF5 gene to chromosome 1q32.
PubMed ID: 9177772
PubMed ID: 11384837
Title: The TNF-receptor-associated factor family: scaffold molecules for cytokine receptors, kinases and their regulators.
PubMed ID: 11384837
PubMed ID: 11607847
Title: Tumor necrosis factor receptor-associated factors (TRAFs).
PubMed ID: 11607847
PubMed ID: 9162022
Title: Herpesvirus entry mediator, a member of the tumor necrosis factor receptor (TNFR) family, interacts with members of the TNFR-associated factor family and activates the transcription factors NF-kappaB and AP-1.
PubMed ID: 9162022
PubMed ID: 9153189
Title: ATAR, a novel tumor necrosis factor receptor family member, signals through TRAF2 and TRAF5.
PubMed ID: 9153189
PubMed ID: 9275204
Title: Tumor necrosis factor (TNF)-mediated kinase cascades: bifurcation of nuclear factor-kappaB and c-jun N-terminal kinase (JNK/SAPK) pathways at TNF receptor-associated factor 2.
PubMed ID: 9275204
PubMed ID: 8999898
Title: Tumor necrosis factor receptor-associated factor (TRAF) 5 and TRAF2 are involved in CD30-mediated NFkappaB activation.
PubMed ID: 8999898
PubMed ID: 9774977
Title: ASK1 is essential for JNK/SAPK activation by TRAF2.
PubMed ID: 9774977
PubMed ID: 9718306
Title: CD40-tumor necrosis factor receptor-associated factor (TRAF) interactions: regulation of CD40 signaling through multiple TRAF binding sites and TRAF hetero-oligomerization.
PubMed ID: 9718306
DOI: 10.1021/bi981067q
PubMed ID: 9488716
Title: Activation of OX40 signal transduction pathways leads to tumor necrosis factor receptor-associated factor (TRAF) 2- and TRAF5-mediated NF-kappaB activation.
PubMed ID: 9488716
PubMed ID: 9642260
Title: RIP2 is a novel NF-kappaB-activating and cell death-inducing kinase.
PubMed ID: 9642260
PubMed ID: 10809768
Title: TAJ, a novel member of the tumor necrosis factor receptor family, activates the c-Jun N-terminal kinase pathway and mediates caspase-independent cell death.
PubMed ID: 10809768
PubMed ID: 9774460
Title: The TRAF family of signal transducers mediates NF-kappaB activation by the TRANCE receptor.
PubMed ID: 9774460
PubMed ID: 10764746
Title: TTRAP, a novel protein that associates with CD40, tumor necrosis factor (TNF) receptor-75 and TNF receptor-associated factors (TRAFs), and that inhibits nuclear factor-kappa B activation.
PubMed ID: 10764746
PubMed ID: 10880535
Title: TACI is a TRAF-interacting receptor for TALL-1, a tumor necrosis factor family member involved in B cell regulation.
PubMed ID: 10880535
PubMed ID: 10908663
Title: B cell maturation protein is a receptor for the tumor necrosis factor family member TALL-1.
PubMed ID: 10908663
PubMed ID: 15121867
Title: TRAF family proteins link PKR with NF-kappa B activation.
PubMed ID: 15121867
PubMed ID: 19690332
Title: Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions.
PubMed ID: 19690332
Sequence Information:
- Length: 557
- Mass: 64406
- Checksum: 86EB3724CE111176
- Sequence:
MAYSEEHKGM PCGFIRQNSG NSISLDFEPS IEYQFVERLE ERYKCAFCHS VLHNPHQTGC GHRFCQHCIL SLRELNTVPI CPVDKEVIKS QEVFKDNCCK REVLNLYVYC SNAPGCNAKV ILGRYQDHLQ QCLFQPVQCS NEKCREPVLR KDLKEHLSAS CQFRKEKCLY CKKDVVVINL QNHEENLCPE YPVFCPNNCA KIILKTEVDE HLAVCPEAEQ DCPFKHYGCA VTDKRRNLQQ HEHSALREHM RLVLEKNVQL EEQISDLHKS LEQKESKIQQ LAETIKKLEK EFKQFAQLFG KNGSFLPNIQ VFASHIDKSA WLEAQVHQLL QMVNQQQNKF DLRPLMEAVD TVKQKITLLE NNDQRLAVLE EETNKHDTHI NIHKAQLSKN EERFKLLEGT CYNGKLIWKV TDYKMKKREA VDGHTVSIFS QSFYTSRCGY RLCARAYLNG DGSGRGSHLS LYFVVMRGEF DSLLQWPFRQ RVTLMLLDQS GKKNIMETFK PDPNSSSFKR PDGEMNIASG CPRFVAHSVL ENAKNAYIKD DTLFLKVAVD LTDLEDL