Details for: TRAPPC3

Gene ID: 27095

Symbol: TRAPPC3

Ensembl ID: ENSG00000054116

Description: trafficking protein particle complex subunit 3

Associated with

Cells (max top 100)

(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)

  • Cell Name: polychromatophilic erythroblast (CL0000550)
    Fold Change: 221.6719
    Cell Significance Index: -34.4800
  • Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
    Fold Change: 129.9462
    Cell Significance Index: -32.9600
  • Cell Name: smooth muscle fiber of ileum (CL1000278)
    Fold Change: 91.6923
    Cell Significance Index: -43.2900
  • Cell Name: mucosal type mast cell (CL0000485)
    Fold Change: 89.8446
    Cell Significance Index: -36.5000
  • Cell Name: peripheral blood mononuclear cell (CL2000001)
    Fold Change: 81.7286
    Cell Significance Index: -42.0400
  • Cell Name: ciliated cell of the bronchus (CL0002332)
    Fold Change: 38.4816
    Cell Significance Index: -36.7400
  • Cell Name: orthochromatic erythroblast (CL0000552)
    Fold Change: 31.9314
    Cell Significance Index: -39.3700
  • Cell Name: stromal cell of bone marrow (CL0010001)
    Fold Change: 10.7044
    Cell Significance Index: -42.2400
  • Cell Name: CD8-alpha-beta-positive, alpha-beta intraepithelial T cell (CL0000796)
    Fold Change: 10.6986
    Cell Significance Index: -28.6600
  • Cell Name: CD8-positive, alpha-beta regulatory T cell (CL0000795)
    Fold Change: 9.9969
    Cell Significance Index: -30.7100
  • Cell Name: epidermal Langerhans cell (CL0002457)
    Fold Change: 6.4197
    Cell Significance Index: -14.0500
  • Cell Name: basal cell of prostate epithelium (CL0002341)
    Fold Change: 2.1983
    Cell Significance Index: 59.8400
  • Cell Name: epithelial cell of small intestine (CL0002254)
    Fold Change: 1.8233
    Cell Significance Index: 296.5400
  • Cell Name: conjunctival epithelial cell (CL1000432)
    Fold Change: 1.5612
    Cell Significance Index: 21.3000
  • Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
    Fold Change: 1.4565
    Cell Significance Index: 68.4600
  • Cell Name: acinar cell of salivary gland (CL0002623)
    Fold Change: 1.3323
    Cell Significance Index: 62.1200
  • Cell Name: luminal hormone-sensing cell of mammary gland (CL4033058)
    Fold Change: 1.2512
    Cell Significance Index: 7.7000
  • Cell Name: lactocyte (CL0002325)
    Fold Change: 1.2164
    Cell Significance Index: 157.1600
  • Cell Name: CD4-positive, alpha-beta memory T cell, CD45RO-positive (CL0001204)
    Fold Change: 1.1945
    Cell Significance Index: 35.0800
  • Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
    Fold Change: 1.1881
    Cell Significance Index: 88.5500
  • Cell Name: glycinergic neuron (CL1001509)
    Fold Change: 0.9815
    Cell Significance Index: 51.5300
  • Cell Name: cell in vitro (CL0001034)
    Fold Change: 0.9158
    Cell Significance Index: 500.1300
  • Cell Name: basal cell of urothelium (CL1000486)
    Fold Change: 0.8837
    Cell Significance Index: 108.6700
  • Cell Name: hair follicular keratinocyte (CL2000092)
    Fold Change: 0.8181
    Cell Significance Index: 361.7000
  • Cell Name: intermediate cell of urothelium (CL4030055)
    Fold Change: 0.7981
    Cell Significance Index: 143.8800
  • Cell Name: microfold cell of epithelium of small intestine (CL1000353)
    Fold Change: 0.6879
    Cell Significance Index: 47.5700
  • Cell Name: stromal cell of ovary (CL0002132)
    Fold Change: 0.6876
    Cell Significance Index: 94.4300
  • Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
    Fold Change: 0.6723
    Cell Significance Index: 134.8600
  • Cell Name: sebum secreting cell (CL0000317)
    Fold Change: 0.6548
    Cell Significance Index: 46.3100
  • Cell Name: tonsil germinal center B cell (CL2000006)
    Fold Change: 0.6502
    Cell Significance Index: 76.6800
  • Cell Name: fibroblast of dermis (CL0002551)
    Fold Change: 0.6149
    Cell Significance Index: 12.8700
  • Cell Name: early pro-B cell (CL0002046)
    Fold Change: 0.6136
    Cell Significance Index: 39.5900
  • Cell Name: granulosa cell (CL0000501)
    Fold Change: 0.5822
    Cell Significance Index: 15.3100
  • Cell Name: bladder urothelial cell (CL1001428)
    Fold Change: 0.5808
    Cell Significance Index: 30.1700
  • Cell Name: tuft cell of colon (CL0009041)
    Fold Change: 0.5729
    Cell Significance Index: 517.3300
  • Cell Name: placental villous trophoblast (CL2000060)
    Fold Change: 0.5724
    Cell Significance Index: 15.2900
  • Cell Name: colon goblet cell (CL0009039)
    Fold Change: 0.5272
    Cell Significance Index: 52.1500
  • Cell Name: odontoblast (CL0000060)
    Fold Change: 0.4070
    Cell Significance Index: 52.1700
  • Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
    Fold Change: 0.3318
    Cell Significance Index: 11.5300
  • Cell Name: pancreatic acinar cell (CL0002064)
    Fold Change: 0.2771
    Cell Significance Index: 47.3100
  • Cell Name: endothelial cell of venule (CL1000414)
    Fold Change: 0.2667
    Cell Significance Index: 3.0300
  • Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
    Fold Change: 0.2605
    Cell Significance Index: 93.4300
  • Cell Name: neoplastic cell (CL0001063)
    Fold Change: 0.2273
    Cell Significance Index: 45.1000
  • Cell Name: eye photoreceptor cell (CL0000287)
    Fold Change: 0.2234
    Cell Significance Index: 14.0800
  • Cell Name: enterocyte of epithelium of large intestine (CL0002071)
    Fold Change: 0.1569
    Cell Significance Index: 7.1100
  • Cell Name: GABAergic interneuron (CL0011005)
    Fold Change: 0.1430
    Cell Significance Index: 98.9100
  • Cell Name: enterocyte of epithelium of small intestine (CL1000334)
    Fold Change: 0.1052
    Cell Significance Index: 3.0300
  • Cell Name: enteroendocrine cell of colon (CL0009042)
    Fold Change: 0.0909
    Cell Significance Index: 17.3000
  • Cell Name: pulmonary alveolar epithelial cell (CL0000322)
    Fold Change: 0.0361
    Cell Significance Index: 27.3000
  • Cell Name: pigmented epithelial cell (CL0000529)
    Fold Change: 0.0220
    Cell Significance Index: 41.4400
  • Cell Name: mesenchymal cell (CL0008019)
    Fold Change: 0.0203
    Cell Significance Index: 0.3400
  • Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
    Fold Change: 0.0082
    Cell Significance Index: 0.2300
  • Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
    Fold Change: 0.0008
    Cell Significance Index: 0.6000
  • Cell Name: pancreatic A cell (CL0000171)
    Fold Change: -0.0122
    Cell Significance Index: -9.0500
  • Cell Name: pancreatic PP cell (CL0002275)
    Fold Change: -0.0122
    Cell Significance Index: -7.6200
  • Cell Name: anterior lens cell (CL0002223)
    Fold Change: -0.0144
    Cell Significance Index: -26.5500
  • Cell Name: small intestine goblet cell (CL1000495)
    Fold Change: -0.0165
    Cell Significance Index: -0.5800
  • Cell Name: lens epithelial cell (CL0002224)
    Fold Change: -0.0172
    Cell Significance Index: -26.4400
  • Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
    Fold Change: -0.0209
    Cell Significance Index: -13.2900
  • Cell Name: abnormal cell (CL0001061)
    Fold Change: -0.0267
    Cell Significance Index: -2.7200
  • Cell Name: secondary lens fiber (CL0002225)
    Fold Change: -0.0282
    Cell Significance Index: -38.3900
  • Cell Name: type B pancreatic cell (CL0000169)
    Fold Change: -0.0512
    Cell Significance Index: -28.8700
  • Cell Name: ciliary muscle cell (CL1000443)
    Fold Change: -0.0556
    Cell Significance Index: -25.2200
  • Cell Name: lung endothelial cell (CL1001567)
    Fold Change: -0.0597
    Cell Significance Index: -3.1100
  • Cell Name: CD14-positive, CD16-negative classical monocyte (CL0002057)
    Fold Change: -0.0698
    Cell Significance Index: -1.2900
  • Cell Name: umbrella cell of urothelium (CL4030056)
    Fold Change: -0.0749
    Cell Significance Index: -0.6900
  • Cell Name: pro-T cell (CL0000827)
    Fold Change: -0.0752
    Cell Significance Index: -1.9200
  • Cell Name: pancreatic D cell (CL0000173)
    Fold Change: -0.0788
    Cell Significance Index: -16.5900
  • Cell Name: pancreatic ductal cell (CL0002079)
    Fold Change: -0.0904
    Cell Significance Index: -10.3600
  • Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
    Fold Change: -0.0927
    Cell Significance Index: -1.9800
  • Cell Name: cardiac muscle myoblast (CL0000513)
    Fold Change: -0.0950
    Cell Significance Index: -7.2900
  • Cell Name: dopaminergic neuron (CL0000700)
    Fold Change: -0.1056
    Cell Significance Index: -30.3700
  • Cell Name: vascular lymphangioblast (CL0005022)
    Fold Change: -0.1703
    Cell Significance Index: -3.0100
  • Cell Name: pigmented ciliary epithelial cell (CL0002303)
    Fold Change: -0.1855
    Cell Significance Index: -26.9700
  • Cell Name: epithelial cell of stomach (CL0002178)
    Fold Change: -0.1990
    Cell Significance Index: -23.1900
  • Cell Name: neutrophil progenitor cell (CL0000834)
    Fold Change: -0.2452
    Cell Significance Index: -6.5600
  • Cell Name: kidney cell (CL1000497)
    Fold Change: -0.2931
    Cell Significance Index: -2.3400
  • Cell Name: pancreatic endocrine cell (CL0008024)
    Fold Change: -0.3250
    Cell Significance Index: -37.1000
  • Cell Name: fibroblast of mammary gland (CL0002555)
    Fold Change: -0.3366
    Cell Significance Index: -9.6500
  • Cell Name: paneth cell of epithelium of small intestine (CL1000343)
    Fold Change: -0.3674
    Cell Significance Index: -7.9600
  • Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
    Fold Change: -0.3769
    Cell Significance Index: -39.2500
  • Cell Name: transit amplifying cell of colon (CL0009011)
    Fold Change: -0.3790
    Cell Significance Index: -12.1400
  • Cell Name: hippocampal granule cell (CL0001033)
    Fold Change: -0.3804
    Cell Significance Index: -25.5800
  • Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
    Fold Change: -0.4087
    Cell Significance Index: -32.3700
  • Cell Name: enteroendocrine cell of small intestine (CL0009006)
    Fold Change: -0.4264
    Cell Significance Index: -10.6600
  • Cell Name: cortical cell of adrenal gland (CL0002097)
    Fold Change: -0.4269
    Cell Significance Index: -11.4400
  • Cell Name: forebrain neuroblast (CL1000042)
    Fold Change: -0.4466
    Cell Significance Index: -27.4500
  • Cell Name: retinal progenitor cell (CL0002672)
    Fold Change: -0.5460
    Cell Significance Index: -30.6400
  • Cell Name: germ cell (CL0000586)
    Fold Change: -0.5735
    Cell Significance Index: -4.3300
  • Cell Name: indirect pathway medium spiny neuron (CL4023029)
    Fold Change: -0.5754
    Cell Significance Index: -25.4500
  • Cell Name: retinal rod cell (CL0000604)
    Fold Change: -0.5813
    Cell Significance Index: -6.9300
  • Cell Name: skeletal muscle myoblast (CL0000515)
    Fold Change: -0.5850
    Cell Significance Index: -6.3600
  • Cell Name: intestinal tuft cell (CL0019032)
    Fold Change: -0.6071
    Cell Significance Index: -37.2200
  • Cell Name: direct pathway medium spiny neuron (CL4023026)
    Fold Change: -0.6737
    Cell Significance Index: -25.5100
  • Cell Name: cerebellar granule cell (CL0001031)
    Fold Change: -0.7271
    Cell Significance Index: -12.4600
  • Cell Name: peg cell (CL4033014)
    Fold Change: -0.7414
    Cell Significance Index: -17.1300
  • Cell Name: paneth cell of colon (CL0009009)
    Fold Change: -0.7775
    Cell Significance Index: -11.6500
  • Cell Name: skeletal muscle fiber (CL0008002)
    Fold Change: -0.7777
    Cell Significance Index: -19.9900
  • Cell Name: intestinal epithelial cell (CL0002563)
    Fold Change: -0.7796
    Cell Significance Index: -8.0700
  • Cell Name: kidney epithelial cell (CL0002518)
    Fold Change: -0.8043
    Cell Significance Index: -23.6900

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Other Information

**Key Characteristics:** 1. **Subunit of TRAPP complex:** TRAPPC3 is a subunit of the TRAPP complex, a conserved protein complex involved in regulating membrane trafficking pathways. 2. **Regulation of vesicle-mediated transport:** TRAPPC3 is involved in the regulation of vesicle-mediated transport, including endoplasmic reticulum to Golgi anterograde transport and intra-Golgi vesicle-mediated transport. 3. **Protein modification:** TRAPPC3 is involved in the regulation of protein modification, including post-translational protein modification and glycosylation. 4. **Protein binding:** TRAPPC3 is a protein-binding subunit, interacting with various proteins involved in membrane trafficking pathways. 5. **Significant expression in various cell types:** TRAPPC3 is significantly expressed in various cell types, including placental villous trophoblast, epithelial cells, and progenitor cells of mammary luminal epithelium. **Pathways and Functions:** 1. **Asparagine n-linked glycosylation:** TRAPPC3 is involved in the regulation of asparagine n-linked glycosylation, a post-translational modification of proteins. 2. **Cis-golgi network membrane:** TRAPPC3 is involved in the regulation of cis-golgi network membrane trafficking, including vesicle-mediated transport and protein modification. 3. **Copii-mediated vesicle transport:** TRAPPC3 is involved in the regulation of Copii-mediated vesicle transport, a conserved protein complex involved in regulating membrane trafficking pathways. 4. **Copii vesicle coating:** TRAPPC3 is involved in the regulation of Copii vesicle coating, a process involved in regulating vesicle-mediated transport. 5. **Cytoplasm, Cytosol, Endoplasmic reticulum, Endoplasmic reticulum to Golgi vesicle-mediated transport, Er to golgi anterograde transport, Golgi apparatus, Golgi membrane, Intra-golgi vesicle-mediated transport, Membrane trafficking, Metabolism of proteins, Post-translational protein modification, Protein binding, Rab gepf exchange GTP for GDP on Rabs, Rab regulation of trafficking, Transport to the golgi and subsequent modification, Trapp complex, Trappiii protein complex, Trappii protein complex, Vesicle-mediated transport, Vesicle coating, Vesicle tethering:** TRAPPC3 is involved in various membrane trafficking pathways, including vesicle-mediated transport, protein modification, and protein binding. **Clinical Significance:** 1. **Cancer:** Dysregulation of TRAPPC3 has been implicated in various cancers, including breast cancer and prostate cancer. 2. **Metabolic disorders:** TRAPPC3 has been implicated in the regulation of metabolic disorders, including diabetes and obesity. 3. **Neurological disorders:** TRAPPC3 has been implicated in various neurological disorders, including Alzheimer's disease and Parkinson's disease. 4. **Developmental disorders:** TRAPPC3 has been implicated in various developmental disorders, including Down syndrome and autism spectrum disorder. 5. **Pharmacological applications:** TRAPPC3 is a potential target for pharmacological intervention in various diseases, including cancer and metabolic disorders. In conclusion, TRAPPC3 is a critical subunit of the TRAPP complex involved in regulating membrane trafficking pathways, including vesicle-mediated transport, protein modification, and protein binding. Its dysregulation has been implicated in various diseases, including cancer, metabolic disorders, and neurological disorders. Further research is needed to fully understand the role of TRAPPC3 in various cellular processes and its potential as a therapeutic target.

Genular Protein ID: 2432986443

Symbol: TPPC3_HUMAN

Name: Trafficking protein particle complex subunit 3

UniProtKB Accession Codes:

O43617 A6NDN0 B2RDN2 D3DPS2

Database IDs:

AGR 1 AlphaFoldDB 1 Antibodypedia 1 Bgee 1 BioGRID 1 BioGRID-ORCS 1 BioMuta 1 CCDS 2 CDD 1 CORUM 1 CTD 1 ChiTaRS 1 ComplexPortal 4 DIP 1 DNASU 1 DisGeNET 1 DrugBank 3 EMBL 9 Ensembl 4 EvolutionaryTrace 1 ExpressionAtlas 1 GO 14 Gene3D 1 GeneCards 1 GeneTree 1 GeneWiki 1 GenomeRNAi 1 HGNC 1 HOGENOM 1 HPA 1 InParanoid 1 IntAct 1 InterPro 3 KEGG 1 MANE-Select 1 MIM 1 MINT 1 MassIVE 1 NCBI Taxonomy 1 OpenTargets 1 OrthoDB 1 PANTHER 2 PDB 4 PDBsum 4 PIRSF 1 PRO 1 PathwayCommons 1 PaxDb 1 PeptideAtlas 1 Pfam 1 PharmGKB 1 Pharos 1 PhosphoSitePlus 1 PhylomeDB 1 Proteomes 1 ProteomicsDB 2 Pumba 1 RNAct 1 Reactome 2 RefSeq 5 SMR 1 STRING 1 SUPFAM 1 SignaLink 1 SwissPalm 1 TopDownProteomics 1 TreeFam 1 UCSC 1 VEuPathDB 1 eggNOG 1 iPTMnet 1 jPOST 1 neXtProt 1

Citations:

PubMed ID: 9564032

Title: TRAPP, a highly conserved novel complex on the cis-Golgi that mediates vesicle docking and fusion.

PubMed ID: 9564032

DOI: 10.1093/emboj/17.9.2494

PubMed ID: 14702039

Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.

PubMed ID: 14702039

DOI: 10.1038/ng1285

PubMed ID: 16710414

Title: The DNA sequence and biological annotation of human chromosome 1.

PubMed ID: 16710414

DOI: 10.1038/nature04727

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 11805826

Title: Functional organization of the yeast proteome by systematic analysis of protein complexes.

PubMed ID: 11805826

DOI: 10.1038/415141a

PubMed ID: 19416478

Title: TRAPPC2L is a novel, highly conserved TRAPP-interacting protein.

PubMed ID: 19416478

DOI: 10.1111/j.1600-0854.2009.00906.x

PubMed ID: 21269460

Title: Initial characterization of the human central proteome.

PubMed ID: 21269460

DOI: 10.1186/1752-0509-5-17

PubMed ID: 21525244

Title: C4orf41 and TTC-15 are mammalian TRAPP components with a role at an early stage in ER-to-Golgi trafficking.

PubMed ID: 21525244

DOI: 10.1091/mbc.e10-11-0873

PubMed ID: 24275569

Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.

PubMed ID: 24275569

DOI: 10.1016/j.jprot.2013.11.014

PubMed ID: 25944712

Title: N-terminome analysis of the human mitochondrial proteome.

PubMed ID: 25944712

DOI: 10.1002/pmic.201400617

PubMed ID: 15692564

Title: Structure of palmitoylated BET3: insights into TRAPP complex assembly and membrane localization.

PubMed ID: 15692564

DOI: 10.1038/sj.emboj.7600565

PubMed ID: 16262728

Title: Biochemical and crystallographic studies reveal a specific interaction between TRAPP subunits Trs33p and Bet3p.

PubMed ID: 16262728

DOI: 10.1111/j.1600-0854.2005.00352.x

PubMed ID: 16828797

Title: Structure of the Bet3-Tpc6B core of TRAPP: two Tpc6 paralogs form trimeric complexes with Bet3 and Mum2.

PubMed ID: 16828797

DOI: 10.1016/j.jmb.2006.06.012

Sequence Information:

  • Length: 180
  • Mass: 20274
  • Checksum: B5E2D92BE8A39599
  • Sequence:
    • MSRQANRGTE SKKMSSELFT LTYGALVTQL CKDYENDEDV NKQLDKMGFN IGVRLIEDFL 
ARSNVGRCHD FRETADVIAK VAFKMYLGIT PSITNWSPAG DEFSLILENN PLVDFVELPD 
NHSSLIYSNL LCGVLRGALE MVQMAVEAKF VQDTLKGDGV TEIRMRFIRR IEDNLPAGEE

Genular Protein ID: 26309042

Symbol: A0A087WWM0_HUMAN

Name: N/A

UniProtKB Accession Codes:

A0A087WWM0

Database IDs:

ARBA 5 AlphaFoldDB 1 Antibodypedia 1 Bgee 1 BioGRID-ORCS 1 CDD 1 CTD 1 ChiTaRS 1 DNASU 1 DisGeNET 1 EMBL 1 Ensembl 2 ExpressionAtlas 1 GO 5 Gene3D 1 GeneTree 1 HGNC 1 IntAct 1 InterPro 3 MassIVE 1 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PIRNR 1 PIRSF 1 PeptideAtlas 2 Pfam 1 Proteomes 2 ProteomicsDB 1 RefSeq 1 SMR 1 SUPFAM 1 UCSC 1 VEuPathDB 1

Citations:

PubMed ID: 11237011

Title: Initial sequencing and analysis of the human genome.

PubMed ID: 11237011

DOI: 10.1038/35057062

PubMed ID: 15496913

Title: Finishing the euchromatic sequence of the human genome.

PubMed ID: 15496913

DOI: 10.1038/nature03001

PubMed ID: 16710414

Title: The DNA sequence and biological annotation of human chromosome 1.

PubMed ID: 16710414

DOI: 10.1038/nature04727

PubMed ID: 21269460

Title: Initial characterization of the human central proteome.

PubMed ID: 21269460

DOI: 10.1186/1752-0509-5-17

PubMed ID: 24275569

Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.

PubMed ID: 24275569

DOI: 10.1016/j.jprot.2013.11.014

PubMed ID: 25944712

Title: N-terminome analysis of the human mitochondrial proteome.

PubMed ID: 25944712

Sequence Information:

  • Length: 188
  • Mass: 21231
  • Checksum: ED756652A2769910
  • Sequence:
    • MSRQANRGTE SKKMSSELFT LTYGALVTQL CKDYENDEDV NKQLDKILFS NFLPRGFNIG 
VRLIEDFLAR SNVGRCHDFR ETADVIAKVA FKMYLGITPS ITNWSPAGDE FSLILENNPL 
VDFVELPDNH SSLIYSNLLC GVLRGALEMV QMAVEAKFVQ DTLKGDGVTE IRMRFIRRIE 
DNLPAGEE

Genular Protein ID: 1856391261

Symbol: A0A087WYS5_HUMAN

Name: N/A

UniProtKB Accession Codes:

A0A087WYS5

Database IDs:

ARBA 5 AlphaFoldDB 1 Antibodypedia 1 Bgee 1 BioGRID-ORCS 1 CDD 1 CTD 1 ChiTaRS 1 DNASU 1 DisGeNET 1 EMBL 1 Ensembl 2 ExpressionAtlas 1 GO 4 Gene3D 1 GeneTree 1 HGNC 1 InterPro 3 MassIVE 1 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PeptideAtlas 2 Pfam 1 Proteomes 2 ProteomicsDB 1 RefSeq 1 SMR 1 SUPFAM 1 UCSC 1 VEuPathDB 1

Citations:

PubMed ID: 11237011

Title: Initial sequencing and analysis of the human genome.

PubMed ID: 11237011

DOI: 10.1038/35057062

PubMed ID: 15496913

Title: Finishing the euchromatic sequence of the human genome.

PubMed ID: 15496913

DOI: 10.1038/nature03001

PubMed ID: 16710414

Title: The DNA sequence and biological annotation of human chromosome 1.

PubMed ID: 16710414

DOI: 10.1038/nature04727

PubMed ID: 21269460

Title: Initial characterization of the human central proteome.

PubMed ID: 21269460

DOI: 10.1186/1752-0509-5-17

PubMed ID: 24275569

Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.

PubMed ID: 24275569

DOI: 10.1016/j.jprot.2013.11.014

PubMed ID: 25944712

Title: N-terminome analysis of the human mitochondrial proteome.

PubMed ID: 25944712

Sequence Information:

  • Length: 114
  • Mass: 12778
  • Checksum: A680AB2CB46B0D65
  • Sequence:
    • MSRQANRGTE SKKMVAFKMY LGITPSITNW SPAGDEFSLI LENNPLVDFV ELPDNHSSLI 
YSNLLCGVLR GALEMVQMAV EAKFVQDTLK GDGVTEIRMR FIRRIEDNLP AGEE

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.