Details for: GPC3

Gene ID: 2719

Symbol: GPC3

Ensembl ID: ENSG00000147257

Description: glypican 3

Associated with

Cells (max top 100)

(Marker Score score is uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)

  • Cell Name: hepatoblast (CL0005026)
    Fold Change: 13.74
    Marker Score: 45022
  • Cell Name: mesodermal cell (CL0000222)
    Fold Change: 3.21
    Marker Score: 42294
  • Cell Name: interstitial cell of ovary (CL0002094)
    Fold Change: 2.98
    Marker Score: 19408
  • Cell Name: epithelial cell of nephron (CL1000449)
    Fold Change: 2.95
    Marker Score: 6170.5
  • Cell Name: skeletal muscle satellite cell (CL0000594)
    Fold Change: 2.9
    Marker Score: 1942
  • Cell Name: mesenchymal stem cell (CL0000134)
    Fold Change: 2.76
    Marker Score: 4247
  • Cell Name: alveolar type 2 fibroblast cell (CL4028006)
    Fold Change: 2.72
    Marker Score: 1515
  • Cell Name: erythroblast (CL0000765)
    Fold Change: 2.48
    Marker Score: 1547
  • Cell Name: kidney cell (CL1000497)
    Fold Change: 2.41
    Marker Score: 1609
  • Cell Name: syncytiotrophoblast cell (CL0000525)
    Fold Change: 1.9
    Marker Score: 1561
  • Cell Name: fibroblast of lung (CL0002553)
    Fold Change: 1.89
    Marker Score: 4939
  • Cell Name: Kupffer cell (CL0000091)
    Fold Change: 1.86
    Marker Score: 1865
  • Cell Name: fibroblast of mammary gland (CL0002555)
    Fold Change: 1.86
    Marker Score: 63301
  • Cell Name: nephron tubule epithelial cell (CL1000494)
    Fold Change: 1.85
    Marker Score: 434
  • Cell Name: kidney loop of Henle thick ascending limb epithelial cell (CL1001106)
    Fold Change: 1.79
    Marker Score: 4805
  • Cell Name: Unknown (CL0002371)
    Fold Change: 1.75
    Marker Score: 1864
  • Cell Name: double negative thymocyte (CL0002489)
    Fold Change: 1.71
    Marker Score: 2354
  • Cell Name: enteric smooth muscle cell (CL0002504)
    Fold Change: 1.7
    Marker Score: 4005
  • Cell Name: Purkinje cell (CL0000121)
    Fold Change: 1.7
    Marker Score: 57258
  • Cell Name: cardiac endothelial cell (CL0010008)
    Fold Change: 1.66
    Marker Score: 3145
  • Cell Name: kidney interstitial fibroblast (CL1000692)
    Fold Change: 1.57
    Marker Score: 3026.5
  • Cell Name: fibroblast of breast (CL4006000)
    Fold Change: 1.54
    Marker Score: 877
  • Cell Name: trophoblast giant cell (CL0002488)
    Fold Change: 1.54
    Marker Score: 497
  • Cell Name: mural cell (CL0008034)
    Fold Change: 1.47
    Marker Score: 168321
  • Cell Name: multi-ciliated epithelial cell (CL0005012)
    Fold Change: 1.44
    Marker Score: 2730
  • Cell Name: leptomeningeal cell (CL0000708)
    Fold Change: 1.44
    Marker Score: 709
  • Cell Name: epithelial cell of glomerular capsule (CL1000450)
    Fold Change: 1.42
    Marker Score: 361
  • Cell Name: immature innate lymphoid cell (CL0001082)
    Fold Change: 1.32
    Marker Score: 2685
  • Cell Name: kidney proximal straight tubule epithelial cell (CL1000839)
    Fold Change: 1.32
    Marker Score: 3108
  • Cell Name: Mueller cell (CL0000636)
    Fold Change: 1.17
    Marker Score: 1626.5
  • Cell Name: adventitial cell (CL0002503)
    Fold Change: 1.13
    Marker Score: 278
  • Cell Name: theca cell (CL0000503)
    Fold Change: 1.11
    Marker Score: 797
  • Cell Name: granulocyte monocyte progenitor cell (CL0000557)
    Fold Change: 1.07
    Marker Score: 678.5
  • Cell Name: neoplastic cell (CL0001063)
    Fold Change: 1.02
    Marker Score: 6208
  • Cell Name: interstitial cell of Cajal (CL0002088)
    Fold Change: 1.02
    Marker Score: 353
  • Cell Name: cerebral cortex GABAergic interneuron (CL0010011)
    Fold Change: 1
    Marker Score: 71787
  • Cell Name: forebrain radial glial cell (CL0013000)
    Fold Change: 1
    Marker Score: 48012
  • Cell Name: cardiac mesenchymal cell (CL0000569)
    Fold Change: 0.98
    Marker Score: 242
  • Cell Name: absorptive cell (CL0000212)
    Fold Change: 0.98
    Marker Score: 30405
  • Cell Name: tuft cell of colon (CL0009041)
    Fold Change: 0.97
    Marker Score: 502
  • Cell Name: cardiac muscle myoblast (CL0000513)
    Fold Change: 0.97
    Marker Score: 15220
  • Cell Name: BEST4+ intestinal epithelial cell, human (CL4030026)
    Fold Change: 0.97
    Marker Score: 457
  • Cell Name: intestinal crypt stem cell of colon (CL0009043)
    Fold Change: 0.95
    Marker Score: 2411
  • Cell Name: vascular leptomeningeal cell (CL4023051)
    Fold Change: 0.95
    Marker Score: 1088
  • Cell Name: respiratory epithelial cell (CL0002368)
    Fold Change: 0.94
    Marker Score: 515
  • Cell Name: lymphoid lineage restricted progenitor cell (CL0000838)
    Fold Change: 0.93
    Marker Score: 561
  • Cell Name: intestinal epithelial cell (CL0002563)
    Fold Change: 0.93
    Marker Score: 1509
  • Cell Name: small intestine goblet cell (CL1000495)
    Fold Change: 0.92
    Marker Score: 369
  • Cell Name: myofibroblast cell (CL0000186)
    Fold Change: 0.91
    Marker Score: 1127
  • Cell Name: abnormal cell (CL0001061)
    Fold Change: 0.91
    Marker Score: 2732
  • Cell Name: fibroblast of cardiac tissue (CL0002548)
    Fold Change: 0.9
    Marker Score: 5433
  • Cell Name: mesangial cell (CL0000650)
    Fold Change: 0.9
    Marker Score: 1089
  • Cell Name: cell of skeletal muscle (CL0000188)
    Fold Change: 0.9
    Marker Score: 684
  • Cell Name: epithelial cell of small intestine (CL0002254)
    Fold Change: 0.9
    Marker Score: 322
  • Cell Name: transit amplifying cell of small intestine (CL0009012)
    Fold Change: 0.89
    Marker Score: 369
  • Cell Name: kidney loop of Henle thin ascending limb epithelial cell (CL1001107)
    Fold Change: 0.89
    Marker Score: 900
  • Cell Name: transit amplifying cell (CL0009010)
    Fold Change: 0.88
    Marker Score: 5024
  • Cell Name: mesothelial cell of epicardium (CL0011019)
    Fold Change: 0.85
    Marker Score: 272
  • Cell Name: mononuclear cell (CL0000842)
    Fold Change: 0.82
    Marker Score: 265
  • Cell Name: kidney collecting duct cell (CL1001225)
    Fold Change: 0.82
    Marker Score: 161
  • Cell Name: early T lineage precursor (CL0002425)
    Fold Change: 0.81
    Marker Score: 620
  • Cell Name: Leydig cell (CL0000178)
    Fold Change: 0.8
    Marker Score: 866
  • Cell Name: malignant cell (CL0001064)
    Fold Change: 0.8
    Marker Score: 10764
  • Cell Name: muscle precursor cell (CL0000680)
    Fold Change: 0.79
    Marker Score: 204
  • Cell Name: taste receptor cell (CL0000209)
    Fold Change: 0.77
    Marker Score: 666
  • Cell Name: enterocyte of epithelium of small intestine (CL1000334)
    Fold Change: 0.76
    Marker Score: 3187
  • Cell Name: brush cell (CL0002204)
    Fold Change: 0.76
    Marker Score: 692
  • Cell Name: stromal cell (CL0000499)
    Fold Change: 0.76
    Marker Score: 887.5
  • Cell Name: Cajal-Retzius cell (CL0000695)
    Fold Change: 0.76
    Marker Score: 392
  • Cell Name: kidney collecting duct intercalated cell (CL1001432)
    Fold Change: 0.74
    Marker Score: 1227
  • Cell Name: gut absorptive cell (CL0000677)
    Fold Change: 0.74
    Marker Score: 471
  • Cell Name: fibroblast of connective tissue of glandular part of prostate (CL1000305)
    Fold Change: 0.73
    Marker Score: 305
  • Cell Name: pancreatic stellate cell (CL0002410)
    Fold Change: 0.71
    Marker Score: 451
  • Cell Name: fibroblast (CL0000057)
    Fold Change: 0.71
    Marker Score: 687
  • Cell Name: acinar cell (CL0000622)
    Fold Change: 0.71
    Marker Score: 498
  • Cell Name: placental villous trophoblast (CL2000060)
    Fold Change: 0.7
    Marker Score: 2769
  • Cell Name: neutrophil progenitor cell (CL0000834)
    Fold Change: 0.69
    Marker Score: 178
  • Cell Name: mesothelial cell (CL0000077)
    Fold Change: 0.66
    Marker Score: 266
  • Cell Name: neural cell (CL0002319)
    Fold Change: 0.66
    Marker Score: 318
  • Cell Name: enterocyte of colon (CL1000347)
    Fold Change: 0.65
    Marker Score: 994
  • Cell Name: inflammatory cell (CL0009002)
    Fold Change: 0.63
    Marker Score: 270
  • Cell Name: kidney capillary endothelial cell (CL1000892)
    Fold Change: 0.63
    Marker Score: 196
  • Cell Name: mature NK T cell (CL0000814)
    Fold Change: 0.62
    Marker Score: 287
  • Cell Name: subcutaneous fat cell (CL0002521)
    Fold Change: 0.62
    Marker Score: 226
  • Cell Name: kidney loop of Henle thin descending limb epithelial cell (CL1001111)
    Fold Change: 0.61
    Marker Score: 662
  • Cell Name: lactocyte (CL0002325)
    Fold Change: 0.59
    Marker Score: 9546
  • Cell Name: kidney epithelial cell (CL0002518)
    Fold Change: 0.59
    Marker Score: 626
  • Cell Name: smooth muscle myoblast (CL0000514)
    Fold Change: 0.59
    Marker Score: 281
  • Cell Name: connective tissue cell (CL0002320)
    Fold Change: 0.56
    Marker Score: 146
  • Cell Name: intestinal enteroendocrine cell (CL1001516)
    Fold Change: 0.56
    Marker Score: 444
  • Cell Name: mesenchymal lymphangioblast (CL0005021)
    Fold Change: 0.56
    Marker Score: 124
  • Cell Name: epithelial cell of lower respiratory tract (CL0002632)
    Fold Change: 0.55
    Marker Score: 2309
  • Cell Name: skeletal muscle fibroblast (CL0011027)
    Fold Change: 0.55
    Marker Score: 363
  • Cell Name: intestinal tuft cell (CL0019032)
    Fold Change: 0.55
    Marker Score: 173
  • Cell Name: colon epithelial cell (CL0011108)
    Fold Change: 0.53
    Marker Score: 1676
  • Cell Name: progenitor cell of endocrine pancreas (CL0002351)
    Fold Change: 0.52
    Marker Score: 112
  • Cell Name: caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
    Fold Change: 0.51
    Marker Score: 1985
  • Cell Name: transit amplifying cell of colon (CL0009011)
    Fold Change: 0.51
    Marker Score: 236
  • Cell Name: ventricular cardiac muscle cell (CL2000046)
    Fold Change: 0.5
    Marker Score: 208
  • Cell Name: smooth muscle cell of large intestine (CL1000279)
    Fold Change: 0.49
    Marker Score: 187

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Other Information

**Key characteristics:** - GPC3 is a type of glycan-associated protein (GAP). - It is a transmembrane protein that is expressed on the surface of cells. - It is a glycoprotein that is composed of a single polypeptide chain. - It is a key regulator of the metabolism of glycans. **Pathways and functions:** - GPC3 is involved in the regulation of the synthesis, degradation, and transport of glycans. - It is also involved in the regulation of the metabolism of other molecules that are attached to glycans, such as proteins and lipids. - It is involved in the regulation of cell migration and differentiation. - It is also involved in the regulation of inflammation. **Clinical significance:** - Mutations in GPC3 have been linked to several human diseases, including liver disease, cancer, and osteoporosis. - GPC3 is a potential target for the treatment of these diseases. **Additional notes:** - GPC3 is a relatively new protein, and there is still much that is unknown about its function. - It is a promising target for the development of new drugs for human diseases.

Genular Protein ID: 2380943112

Symbol: GPC3_HUMAN

Name: Glypican-3

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 9021160

Title: Mapping of the Simpson-Golabi-Behmel overgrowth syndrome gene (GPC3) to chromosome X in human and rat by fluorescence in situ hybridization.

PubMed ID: 9021160

DOI: 10.1007/s003359900357

PubMed ID: 8589713

Title: Mutations in GPC3, a glypican gene, cause the Simpson-Golabi-Behmel overgrowth syndrome.

PubMed ID: 8589713

DOI: 10.1038/ng0396-241

PubMed ID: 9133586

Title: Cloning and characterization of human cDNAs encoding a protein with high homology to rat intestinal development protein OCI-5.

PubMed ID: 9133586

DOI: 10.1016/s0378-1119(96)00689-0

PubMed ID: 15772651

Title: The DNA sequence of the human X chromosome.

PubMed ID: 15772651

DOI: 10.1038/nature03440

PubMed ID: 9339360

Title: Analysis of exon/intron structure and 400 kb of genomic sequence surrounding the 5'-promoter and 3'-terminal ends of the human glypican 3 (GPC3) gene.

PubMed ID: 9339360

DOI: 10.1006/geno.1997.4916

PubMed ID: 12851874

Title: Glypican-3: a novel serum and histochemical marker for hepatocellular carcinoma.

PubMed ID: 12851874

DOI: 10.1016/s0016-5085(03)00689-9

PubMed ID: 14610063

Title: Processing by proprotein convertases is required for glypican-3 modulation of cell survival, Wnt signaling, and gastrulation movements.

PubMed ID: 14610063

DOI: 10.1083/jcb.200302152

PubMed ID: 15059894

Title: Identification of soluble NH2-terminal fragment of glypican-3 as a serological marker for early-stage hepatocellular carcinoma.

PubMed ID: 15059894

DOI: 10.1158/0008-5472.can-03-2191

PubMed ID: 16024626

Title: Glypican-3 promotes the growth of hepatocellular carcinoma by stimulating canonical Wnt signaling.

PubMed ID: 16024626

DOI: 10.1158/0008-5472.can-04-4244

PubMed ID: 16227623

Title: Processing by convertases is not required for glypican-3-induced stimulation of hepatocellular carcinoma growth.

PubMed ID: 16227623

DOI: 10.1074/jbc.m507004200

PubMed ID: 17549790

Title: The Simpson-Golabi-Behmel syndrome causative glypican-3, binds to and inhibits the dipeptidyl peptidase activity of CD26.

PubMed ID: 17549790

DOI: 10.1002/pmic.200600654

PubMed ID: 21269460

Title: Initial characterization of the human central proteome.

PubMed ID: 21269460

DOI: 10.1186/1752-0509-5-17

PubMed ID: 24496449

Title: Glypican-3 binds to Frizzled and plays a direct role in the stimulation of canonical Wnt signaling.

PubMed ID: 24496449

DOI: 10.1242/jcs.140871

PubMed ID: 26091039

Title: A single kinase generates the majority of the secreted phosphoproteome.

PubMed ID: 26091039

DOI: 10.1016/j.cell.2015.05.028

PubMed ID: 25653284

Title: Processing by convertases is required for glypican-3-induced inhibition of Hedgehog signaling.

PubMed ID: 25653284

DOI: 10.1074/jbc.m114.612705

PubMed ID: 29345911

Title: Role of glycanation and convertase maturation of soluble glypican-3 in inhibiting proliferation of hepatocellular carcinoma cells.

PubMed ID: 29345911

DOI: 10.1021/acs.biochem.7b01208

PubMed ID: 32337544

Title: An affinity chromatography and glycoproteomics workflow to profile the chondroitin sulfate proteoglycans that interact with malarial VAR2CSA in the placenta and in cancer.

PubMed ID: 32337544

DOI: 10.1093/glycob/cwaa039

PubMed ID: 10814714

Title: Mutational analysis of the GPC3/GPC4 glypican gene cluster on Xq26 in patients with Simpson-Golabi-Behmel syndrome: identification of loss-of-function mutations in the GPC3 gene.

PubMed ID: 10814714

DOI: 10.1093/hmg/9.9.1321

Sequence Information:

  • Length: 580
  • Mass: 65563
  • Checksum: 19485B76D3CE15FC
  • Sequence:
  • MAGTVRTACL VVAMLLSLDF PGQAQPPPPP PDATCHQVRS FFQRLQPGLK WVPETPVPGS 
    DLQVCLPKGP TCCSRKMEEK YQLTARLNME QLLQSASMEL KFLIIQNAAV FQEAFEIVVR 
    HAKNYTNAMF KNNYPSLTPQ AFEFVGEFFT DVSLYILGSD INVDDMVNEL FDSLFPVIYT 
    QLMNPGLPDS ALDINECLRG ARRDLKVFGN FPKLIMTQVS KSLQVTRIFL QALNLGIEVI 
    NTTDHLKFSK DCGRMLTRMW YCSYCQGLMM VKPCGGYCNV VMQGCMAGVV EIDKYWREYI 
    LSLEELVNGM YRIYDMENVL LGLFSTIHDS IQYVQKNAGK LTTTIGKLCA HSQQRQYRSA 
    YYPEDLFIDK KVLKVAHVEH EETLSSRRRE LIQKLKSFIS FYSALPGYIC SHSPVAENDT 
    LCWNGQELVE RYSQKAARNG MKNQFNLHEL KMKGPEPVVS QIIDKLKHIN QLLRTMSMPK 
    GRVLDKNLDE EGFESGDCGD DEDECIGGSG DGMIKVKNQL RFLAELAYDL DVDDAPGNSQ 
    QATPKDNEIS TFHNLGNVHS PLKLLTSMAI SVVCFFFLVH

Genular Protein ID: 1812149662

Symbol: B4DTD8_HUMAN

Name: N/A

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 15772651

Title: The DNA sequence of the human X chromosome.

PubMed ID: 15772651

DOI: 10.1038/nature03440

Sequence Information:

  • Length: 564
  • Mass: 63728
  • Checksum: FC5B36FD989E8414
  • Sequence:
  • MAGTVRTACL VVAMLLSLDF PGQAQPPPPP PDATCHQVRS FFQRLQPGLK WVPETPVPGS 
    DLQVCLPKGP TCCSRKMEEK YQLTARLNME QLLQSAKAFE IVVRHAKNYT NAMFKNNYPS 
    LTPQAFEFVG EFFTDVSLYI LGSDINVDDM VNELFDSLFP VIYTQLMNPG LPDSALDINE 
    CLRGARRDLK VFGNFPKLIM TQVSKSLQVT RIFLQALNLG IEVINTTDHL KFSKDCGRML 
    TRMWYCSYCQ GLMMVKPCGG YCNVVMQGCM AGVVEIDKYW REYILSLEEL VNGMYRIYDM 
    ENVLLGLFST IHDSIQYVQK NAGKLTTTIG KLCAHSQQRQ YRSAYYPEDL FIDKKVLKVA 
    HVEHEETLSS RRRELIQKLK SFISFYSALP GYICSHSPVA ENDTLCWNGQ ELVERYSQKA 
    ARNGMKNQFN LHELKMKGPE PVVSQIIDKL KHINQLLRTM SMPKGRVLDK NLDEEGFESG 
    DCGDDEDECI GGSGDGMIKV KNQLRFLAEL AYDLDVDDAP GNSQQATPKD NEISTFHNLG 
    NVHSPLKLLT SMAISVVCFF FLVH

Genular Protein ID: 147062696

Symbol: Q53H15_HUMAN

Name: N/A

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 8125298

Title: Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides.

PubMed ID: 8125298

DOI: 10.1016/0378-1119(94)90802-8

PubMed ID: 9373149

Title: Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library.

PubMed ID: 9373149

DOI: 10.1016/S0378-1119(97)00411-3

Sequence Information:

  • Length: 580
  • Mass: 65595
  • Checksum: ECA8BADDD3D4A45C
  • Sequence:
  • MAGTVRTACL VVAMLLSLDF PGQAQPPPPP PDATCHQVRS FFQRLQPGLK WVPETPVPGS 
    DLQVCLPKGP TCCSRKMEEK YQLTARLNME QLLQSASMEL KFLIIQNAAV FQEAFEIVVR 
    HAKNYTNAMF KNNYPSLTPQ AFEFVGEFFT DVSLYILGSD INVDDMVNEL FDSLFPVIYT 
    QLMNPGLPDS ALDINECLRG ARRDLKVFGN FPKLIMTQVS KSLQVTRIFL QALNLGIEVI 
    NTTDHLKFSK DCGRMLTRMW YCSYCQGLMM VKPCGGYCNV VMQGCMAGVV EIDKYWREYI 
    LSLEELVNGM YRIYDMENVL LGLFSTIHDS IQYVQKNAGK LTTTIGKLCA HSQQRQYRSA 
    YYPEDLFIDK KVLKVAHVEH EETLSSRRRE LIQKLKSFIS FYSALPGYIC SHSPVAENDT 
    LCWNGQELME RYSQKAARNG MKNQFNLHEL KMKGPEPVVS QIIDKLKHIN QLLRTMSMPK 
    GRVLDKNLDE EGFESGDCGD DEDECIGGSG DGMIKVKNQL RFLAELAYDL DVDDAPGNSQ 
    QATPKDNEIS TFHNLGNVHS PLKLLTSMAI SVVCFFFLVH

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. For the full schema, download it here.