Details for: HNRNPF

Gene ID: 3185

Symbol: HNRNPF

Ensembl ID: ENSG00000169813

Description: heterogeneous nuclear ribonucleoprotein F

Associated with

Cells (max top 100)

(Marker Score score is uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)

  • Cell Name: fibroblast of mammary gland (CL0002555)
    Fold Change: 3.18
    Marker Score: 108316
  • Cell Name: skeletal muscle satellite stem cell (CL0008011)
    Fold Change: 3.01
    Marker Score: 3215
  • Cell Name: myeloid leukocyte (CL0000766)
    Fold Change: 2.96
    Marker Score: 3569
  • Cell Name: mature T cell (CL0002419)
    Fold Change: 2.84
    Marker Score: 28111
  • Cell Name: basal cell of prostate epithelium (CL0002341)
    Fold Change: 2.83
    Marker Score: 6902
  • Cell Name: erythroid progenitor cell (CL0000038)
    Fold Change: 2.69
    Marker Score: 2802
  • Cell Name: blood cell (CL0000081)
    Fold Change: 2.64
    Marker Score: 30723
  • Cell Name: type I NK T cell (CL0000921)
    Fold Change: 2.59
    Marker Score: 2036
  • Cell Name: ciliated columnar cell of tracheobronchial tree (CL0002145)
    Fold Change: 2.59
    Marker Score: 22489
  • Cell Name: epithelial cell of urethra (CL1000296)
    Fold Change: 2.58
    Marker Score: 2035
  • Cell Name: cell in vitro (CL0001034)
    Fold Change: 2.53
    Marker Score: 87722
  • Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
    Fold Change: 2.52
    Marker Score: 9703
  • Cell Name: medullary thymic epithelial cell (CL0002365)
    Fold Change: 2.51
    Marker Score: 4108.5
  • Cell Name: decidual natural killer cell, human (CL0002343)
    Fold Change: 2.49
    Marker Score: 6885
  • Cell Name: naive thymus-derived CD8-positive, alpha-beta T cell (CL0000900)
    Fold Change: 2.48
    Marker Score: 4433
  • Cell Name: CD8-alpha-alpha-positive, alpha-beta intraepithelial T cell (CL0000915)
    Fold Change: 2.48
    Marker Score: 3507.5
  • Cell Name: CD4-positive, alpha-beta memory T cell, CD45RO-positive (CL0001204)
    Fold Change: 2.46
    Marker Score: 15745
  • Cell Name: NKp46-positive innate lymphoid cell, human (CL0001076)
    Fold Change: 2.45
    Marker Score: 7154
  • Cell Name: mature gamma-delta T cell (CL0000800)
    Fold Change: 2.43
    Marker Score: 7664.5
  • Cell Name: mature alpha-beta T cell (CL0000791)
    Fold Change: 2.41
    Marker Score: 127216
  • Cell Name: basal cell of epithelium of trachea (CL1000348)
    Fold Change: 2.4
    Marker Score: 17837
  • Cell Name: double negative T regulatory cell (CL0011024)
    Fold Change: 2.38
    Marker Score: 2298
  • Cell Name: DN3 thymocyte (CL0000807)
    Fold Change: 2.38
    Marker Score: 1187
  • Cell Name: memory B cell (CL0000787)
    Fold Change: 2.37
    Marker Score: 1793.5
  • Cell Name: B-1 B cell (CL0000819)
    Fold Change: 2.36
    Marker Score: 4120
  • Cell Name: CD8-positive, alpha-beta memory T cell, CD45RO-positive (CL0001203)
    Fold Change: 2.35
    Marker Score: 6590
  • Cell Name: pro-T cell (CL0000827)
    Fold Change: 2.33
    Marker Score: 9518
  • Cell Name: microfold cell of epithelium of small intestine (CL1000353)
    Fold Change: 2.32
    Marker Score: 554
  • Cell Name: eye photoreceptor cell (CL0000287)
    Fold Change: 2.32
    Marker Score: 690.5
  • Cell Name: CD4-positive, alpha-beta memory T cell (CL0000897)
    Fold Change: 2.31
    Marker Score: 1357
  • Cell Name: retinal rod cell (CL0000604)
    Fold Change: 2.31
    Marker Score: 6590
  • Cell Name: fibroblast of connective tissue of nonglandular part of prostate (CL1000304)
    Fold Change: 2.31
    Marker Score: 1969
  • Cell Name: activated CD4-positive, alpha-beta T cell (CL0000896)
    Fold Change: 2.29
    Marker Score: 1658
  • Cell Name: decidual cell (CL2000002)
    Fold Change: 2.29
    Marker Score: 9874
  • Cell Name: vascular lymphangioblast (CL0005022)
    Fold Change: 2.28
    Marker Score: 3864
  • Cell Name: tonsil germinal center B cell (CL2000006)
    Fold Change: 2.27
    Marker Score: 6734
  • Cell Name: mucous neck cell (CL0000651)
    Fold Change: 2.26
    Marker Score: 5136
  • Cell Name: fraction A pre-pro B cell (CL0002045)
    Fold Change: 2.26
    Marker Score: 2279
  • Cell Name: foveolar cell of stomach (CL0002179)
    Fold Change: 2.26
    Marker Score: 14429
  • Cell Name: Unknown (CL0000548)
    Fold Change: 2.26
    Marker Score: 1648
  • Cell Name: alveolar capillary type 2 endothelial cell (CL4028003)
    Fold Change: 2.26
    Marker Score: 3272
  • Cell Name: stromal cell (CL0000499)
    Fold Change: 2.25
    Marker Score: 2641
  • Cell Name: myoepithelial cell of mammary gland (CL0002324)
    Fold Change: 2.24
    Marker Score: 10993
  • Cell Name: epithelial cell of nephron (CL1000449)
    Fold Change: 2.23
    Marker Score: 4654
  • Cell Name: migratory enteric neural crest cell (CL0002607)
    Fold Change: 2.22
    Marker Score: 2093
  • Cell Name: fibroblast of connective tissue of glandular part of prostate (CL1000305)
    Fold Change: 2.22
    Marker Score: 926
  • Cell Name: lung ciliated cell (CL1000271)
    Fold Change: 2.22
    Marker Score: 1055
  • Cell Name: endothelial cell of uterus (CL0009095)
    Fold Change: 2.22
    Marker Score: 4440
  • Cell Name: lung endothelial cell (CL1001567)
    Fold Change: 2.19
    Marker Score: 19183
  • Cell Name: mesodermal cell (CL0000222)
    Fold Change: 2.18
    Marker Score: 28806
  • Cell Name: neural crest cell (CL0011012)
    Fold Change: 2.18
    Marker Score: 2327
  • Cell Name: CD4-positive helper T cell (CL0000492)
    Fold Change: 2.18
    Marker Score: 2368
  • Cell Name: malignant cell (CL0001064)
    Fold Change: 2.17
    Marker Score: 29207
  • Cell Name: small pre-B-II cell (CL0000954)
    Fold Change: 2.17
    Marker Score: 2606
  • Cell Name: alveolar capillary type 1 endothelial cell (CL4028002)
    Fold Change: 2.17
    Marker Score: 5506
  • Cell Name: stromal cell of ovary (CL0002132)
    Fold Change: 2.17
    Marker Score: 24391
  • Cell Name: CD14-positive, CD16-negative classical monocyte (CL0002057)
    Fold Change: 2.16
    Marker Score: 120968
  • Cell Name: stem cell of epidermis (CL1000428)
    Fold Change: 2.15
    Marker Score: 729
  • Cell Name: double-positive, alpha-beta thymocyte (CL0000809)
    Fold Change: 2.15
    Marker Score: 4213
  • Cell Name: large pre-B-II cell (CL0000957)
    Fold Change: 2.15
    Marker Score: 5837
  • Cell Name: ovarian surface epithelial cell (CL2000064)
    Fold Change: 2.15
    Marker Score: 5841
  • Cell Name: epithelial cell (CL0000066)
    Fold Change: 2.14
    Marker Score: 3406
  • Cell Name: mesenchymal cell (CL0008019)
    Fold Change: 2.14
    Marker Score: 3630
  • Cell Name: naive B cell (CL0000788)
    Fold Change: 2.13
    Marker Score: 1901
  • Cell Name: CD14-positive, CD16-positive monocyte (CL0002397)
    Fold Change: 2.12
    Marker Score: 4134
  • Cell Name: kidney collecting duct intercalated cell (CL1001432)
    Fold Change: 2.12
    Marker Score: 3515
  • Cell Name: luminal epithelial cell of mammary gland (CL0002326)
    Fold Change: 2.12
    Marker Score: 3750
  • Cell Name: ependymal cell (CL0000065)
    Fold Change: 2.12
    Marker Score: 738
  • Cell Name: placental villous trophoblast (CL2000060)
    Fold Change: 2.11
    Marker Score: 8298
  • Cell Name: Kupffer cell (CL0000091)
    Fold Change: 2.1
    Marker Score: 2104
  • Cell Name: capillary endothelial cell (CL0002144)
    Fold Change: 2.1
    Marker Score: 2259
  • Cell Name: kidney epithelial cell (CL0002518)
    Fold Change: 2.1
    Marker Score: 2219
  • Cell Name: intraepithelial lymphocyte (CL0002496)
    Fold Change: 2.09
    Marker Score: 2322
  • Cell Name: eurydendroid cell (CL0000253)
    Fold Change: 2.09
    Marker Score: 853
  • Cell Name: bladder urothelial cell (CL1001428)
    Fold Change: 2.08
    Marker Score: 3069
  • Cell Name: exhausted T cell (CL0011025)
    Fold Change: 2.08
    Marker Score: 1195
  • Cell Name: DN1 thymic pro-T cell (CL0000894)
    Fold Change: 2.07
    Marker Score: 643
  • Cell Name: interstitial cell of ovary (CL0002094)
    Fold Change: 2.07
    Marker Score: 13447
  • Cell Name: gamma-delta T cell (CL0000798)
    Fold Change: 2.07
    Marker Score: 1389
  • Cell Name: naive thymus-derived CD4-positive, alpha-beta T cell (CL0000895)
    Fold Change: 2.06
    Marker Score: 3533
  • Cell Name: pro-B cell (CL0000826)
    Fold Change: 2.04
    Marker Score: 1971.5
  • Cell Name: eukaryotic cell (CL0000255)
    Fold Change: 2.04
    Marker Score: 1051
  • Cell Name: hematopoietic stem cell (CL0000037)
    Fold Change: 2.04
    Marker Score: 1074
  • Cell Name: prostate gland microvascular endothelial cell (CL2000059)
    Fold Change: 2.04
    Marker Score: 792
  • Cell Name: hepatocyte (CL0000182)
    Fold Change: 2.04
    Marker Score: 1390.5
  • Cell Name: neuroblast (sensu Vertebrata) (CL0000031)
    Fold Change: 2.04
    Marker Score: 1279
  • Cell Name: stem cell (CL0000034)
    Fold Change: 2.03
    Marker Score: 4825
  • Cell Name: conjunctival epithelial cell (CL1000432)
    Fold Change: 2.03
    Marker Score: 2138
  • Cell Name: kidney collecting duct principal cell (CL1001431)
    Fold Change: 2.03
    Marker Score: 5118
  • Cell Name: bronchial epithelial cell (CL0002328)
    Fold Change: 2.03
    Marker Score: 537
  • Cell Name: T-helper 22 cell (CL0001042)
    Fold Change: 2.02
    Marker Score: 8677
  • Cell Name: multi-ciliated epithelial cell (CL0005012)
    Fold Change: 2.02
    Marker Score: 3846
  • Cell Name: ciliated cell (CL0000064)
    Fold Change: 2.02
    Marker Score: 6948
  • Cell Name: epithelial cell of esophagus (CL0002252)
    Fold Change: 2.02
    Marker Score: 17392
  • Cell Name: effector CD4-positive, alpha-beta T cell (CL0001044)
    Fold Change: 2.02
    Marker Score: 1888
  • Cell Name: hematopoietic cell (CL0000988)
    Fold Change: 2.01
    Marker Score: 1336
  • Cell Name: CD8-positive, alpha-beta memory T cell (CL0000909)
    Fold Change: 2.01
    Marker Score: 1705
  • Cell Name: fibroblast of connective tissue of prostate (CL1000299)
    Fold Change: 2.01
    Marker Score: 500
  • Cell Name: germinal center B cell (CL0000844)
    Fold Change: 2.01
    Marker Score: 1220
  • Cell Name: lung macrophage (CL1001603)
    Fold Change: 2
    Marker Score: 2292

Hover over a box to see details here...

Hover over a box to see details here...

Hover over a box to see details here...

Other Information

**Key characteristics:** - HNRNPF is a protein with a molecular weight of approximately 120 kDa. - It is a key regulator of the expression of genes involved in immune responses, cell growth, and differentiation. - It is a key regulator of the development and function of immune cells. **Pathways and functions:** - HNRNPF is involved in the regulation of the expression of genes involved in immune responses, cell growth, and differentiation. - It is a key regulator of the development and function of immune cells, including dendritic cells, macrophages, and T cells. - It is also involved in the regulation of inflammation and tissue repair. **Clinical significance:** - Mutations in HNRNPF have been linked to a number of human diseases, including cancer, autoimmune disorders, and inflammatory diseases. - Targeting HNRNPF has been investigated as a therapeutic strategy for these diseases. **Additional information:** - HNRNPF is a member of the heterogeneous nuclear ribonucleoprotein family of proteins. - It is expressed in high levels in the nucleus of cells, where it is involved in the regulation of gene expression. - It is also expressed in cytoplasmic and nuclear vesicles, where it is involved in the transport of proteins and RNA molecules.

Genular Protein ID: 636808024

Symbol: HNRPF_HUMAN

Name: Heterogeneous nuclear ribonucleoprotein F

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 7512260

Title: The hnRNP F protein: unique primary structure, nucleic acid-binding properties, and subcellular localization.

PubMed ID: 7512260

DOI: 10.1093/nar/22.6.1059

PubMed ID: 7499401

Title: Heterogeneous nuclear ribonucleoproteins H, H', and F are members of a ubiquitously expressed subfamily of related but distinct proteins encoded by genes mapping to different chromosomes.

PubMed ID: 7499401

DOI: 10.1074/jbc.270.48.28780

PubMed ID: 1351868

Title: Identification and characterization of a gene at D10S94 in the MEN2A region.

PubMed ID: 1351868

DOI: 10.1016/0888-7543(92)90251-m

PubMed ID: 14702039

Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.

PubMed ID: 14702039

DOI: 10.1038/ng1285

PubMed ID: 15164054

Title: The DNA sequence and comparative analysis of human chromosome 10.

PubMed ID: 15164054

DOI: 10.1038/nature02462

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 11054566

Title: Evidence that Dim1 associates with proteins involved in pre-mRNA splicing, and delineation of residues essential for Dim1 interactions with hnRNP F and Npw38/PQBP-1.

PubMed ID: 11054566

DOI: 10.1016/s0378-1119(00)00372-3

PubMed ID: 11991638

Title: Purification and characterization of native spliceosomes suitable for three-dimensional structural analysis.

PubMed ID: 11991638

DOI: 10.1017/s1355838202021088

PubMed ID: 14654843

Title: Proteomic characterization of the human centrosome by protein correlation profiling.

PubMed ID: 14654843

DOI: 10.1038/nature02166

PubMed ID: 15161980

Title: Sumoylation of heterogeneous nuclear ribonucleoproteins, zinc finger proteins, and nuclear pore complex proteins: a proteomic analysis.

PubMed ID: 15161980

DOI: 10.1073/pnas.0402889101

PubMed ID: 15592455

Title: Immunoaffinity profiling of tyrosine phosphorylation in cancer cells.

PubMed ID: 15592455

DOI: 10.1038/nbt1046

PubMed ID: 17932509

Title: Proteomic and functional analysis of Argonaute-containing mRNA-protein complexes in human cells.

PubMed ID: 17932509

DOI: 10.1038/sj.embor.7401088

PubMed ID: 17525332

Title: ATM and ATR substrate analysis reveals extensive protein networks responsive to DNA damage.

PubMed ID: 17525332

DOI: 10.1126/science.1140321

PubMed ID: 18691976

Title: Kinase-selective enrichment enables quantitative phosphoproteomics of the kinome across the cell cycle.

PubMed ID: 18691976

DOI: 10.1016/j.molcel.2008.07.007

PubMed ID: 19413330

Title: Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach.

PubMed ID: 19413330

DOI: 10.1021/ac9004309

PubMed ID: 19369195

Title: Large-scale proteomics analysis of the human kinome.

PubMed ID: 19369195

DOI: 10.1074/mcp.m800588-mcp200

PubMed ID: 19608861

Title: Lysine acetylation targets protein complexes and co-regulates major cellular functions.

PubMed ID: 19608861

DOI: 10.1126/science.1175371

PubMed ID: 20068231

Title: Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.

PubMed ID: 20068231

DOI: 10.1126/scisignal.2000475

PubMed ID: 21269460

Title: Initial characterization of the human central proteome.

PubMed ID: 21269460

DOI: 10.1186/1752-0509-5-17

PubMed ID: 21406692

Title: System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation.

PubMed ID: 21406692

DOI: 10.1126/scisignal.2001570

PubMed ID: 22223895

Title: Comparative large-scale characterisation of plant vs. mammal proteins reveals similar and idiosyncratic N-alpha acetylation features.

PubMed ID: 22223895

DOI: 10.1074/mcp.m111.015131

PubMed ID: 22814378

Title: N-terminal acetylome analyses and functional insights of the N-terminal acetyltransferase NatB.

PubMed ID: 22814378

DOI: 10.1073/pnas.1210303109

PubMed ID: 23186163

Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.

PubMed ID: 23186163

DOI: 10.1021/pr300630k

PubMed ID: 24275569

Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.

PubMed ID: 24275569

DOI: 10.1016/j.jprot.2013.11.014

PubMed ID: 25772364

Title: SUMO-2 orchestrates chromatin modifiers in response to DNA damage.

PubMed ID: 25772364

DOI: 10.1016/j.celrep.2015.02.033

PubMed ID: 25944712

Title: N-terminome analysis of the human mitochondrial proteome.

PubMed ID: 25944712

DOI: 10.1002/pmic.201400617

PubMed ID: 28112733

Title: Site-specific mapping of the human SUMO proteome reveals co-modification with phosphorylation.

PubMed ID: 28112733

DOI: 10.1038/nsmb.3366

PubMed ID: 16885237

Title: NMR structure of the three quasi RNA recognition motifs (qRRMs) of human hnRNP F and interaction studies with Bcl-x G-tract RNA: a novel mode of RNA recognition.

PubMed ID: 16885237

DOI: 10.1093/nar/gkl488

PubMed ID: 20526337

Title: Structural basis of G-tract recognition and encaging by hnRNP F quasi-RRMs.

PubMed ID: 20526337

DOI: 10.1038/nsmb.1814

Sequence Information:

  • Length: 415
  • Mass: 45672
  • Checksum: D14E170631FB1F31
  • Sequence:
  • MMLGPEGGEG FVVKLRGLPW SCSVEDVQNF LSDCTIHDGA AGVHFIYTRE GRQSGEAFVE 
    LGSEDDVKMA LKKDRESMGH RYIEVFKSHR TEMDWVLKHS GPNSADSAND GFVRLRGLPF 
    GCTKEEIVQF FSGLEIVPNG ITLPVDPEGK ITGEAFVQFA SQELAEKALG KHKERIGHRY 
    IEVFKSSQEE VRSYSDPPLK FMSVQRPGPY DRPGTARRYI GIVKQAGLER MRPGAYSTGY 
    GGYEEYSGLS DGYGFTTDLF GRDLSYCLSG MYDHRYGDSE FTVQSTTGHC VHMRGLPYKA 
    TENDIYNFFS PLNPVRVHIE IGPDGRVTGE ADVEFATHEE AVAAMSKDRA NMQHRYIELF 
    LNSTTGASNG AYSSQVMQGM GVSAAQATYS GLESQSVSGC YGAGYSGQNS MGGYD

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. For the full schema, download it here.