Details for: VTA1
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: polychromatophilic erythroblast (CL0000550)
Fold Change: 203.9921
Cell Significance Index: -31.7300 - Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
Fold Change: 123.9141
Cell Significance Index: -31.4300 - Cell Name: embryonic stem cell (CL0002322)
Fold Change: 86.4188
Cell Significance Index: -35.6000 - Cell Name: smooth muscle fiber of ileum (CL1000278)
Fold Change: 75.3194
Cell Significance Index: -35.5600 - Cell Name: mucosal type mast cell (CL0000485)
Fold Change: 74.5095
Cell Significance Index: -30.2700 - Cell Name: ileal goblet cell (CL1000326)
Fold Change: 53.1428
Cell Significance Index: -35.6600 - Cell Name: ciliated cell of the bronchus (CL0002332)
Fold Change: 31.8620
Cell Significance Index: -30.4200 - Cell Name: orthochromatic erythroblast (CL0000552)
Fold Change: 27.4868
Cell Significance Index: -33.8900 - Cell Name: CD8-alpha-beta-positive, alpha-beta intraepithelial T cell (CL0000796)
Fold Change: 11.6990
Cell Significance Index: -31.3400 - Cell Name: stromal cell of bone marrow (CL0010001)
Fold Change: 8.7860
Cell Significance Index: -34.6700 - Cell Name: CD8-positive, alpha-beta regulatory T cell (CL0000795)
Fold Change: 8.7450
Cell Significance Index: -26.8600 - Cell Name: epidermal Langerhans cell (CL0002457)
Fold Change: 5.7846
Cell Significance Index: -12.6600 - Cell Name: gut absorptive cell (CL0000677)
Fold Change: 1.3586
Cell Significance Index: 81.5600 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 1.2855
Cell Significance Index: 257.8800 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 1.1943
Cell Significance Index: 237.0200 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: 1.0029
Cell Significance Index: 26.7800 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: 0.8590
Cell Significance Index: 11.7200 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: 0.7871
Cell Significance Index: 141.8900 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: 0.7536
Cell Significance Index: 42.2900 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: 0.6043
Cell Significance Index: 74.3100 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 0.5524
Cell Significance Index: 89.8400 - Cell Name: cell in vitro (CL0001034)
Fold Change: 0.5447
Cell Significance Index: 297.4900 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 0.4789
Cell Significance Index: 171.7900 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: 0.4287
Cell Significance Index: 26.3500 - Cell Name: paneth cell of epithelium of small intestine (CL1000343)
Fold Change: 0.4223
Cell Significance Index: 9.1500 - Cell Name: tonsil germinal center B cell (CL2000006)
Fold Change: 0.4121
Cell Significance Index: 48.6000 - Cell Name: GABAergic interneuron (CL0011005)
Fold Change: 0.4012
Cell Significance Index: 277.4900 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: 0.3374
Cell Significance Index: 9.4300 - Cell Name: hair follicular keratinocyte (CL2000092)
Fold Change: 0.3313
Cell Significance Index: 146.4800 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: 0.2995
Cell Significance Index: 8.6300 - Cell Name: enteroendocrine cell of colon (CL0009042)
Fold Change: 0.2794
Cell Significance Index: 53.1700 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: 0.2560
Cell Significance Index: 35.1500 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: 0.2539
Cell Significance Index: 17.0700 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: 0.2297
Cell Significance Index: 11.9300 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: 0.1779
Cell Significance Index: 11.2100 - Cell Name: umbrella cell of urothelium (CL4030056)
Fold Change: 0.1727
Cell Significance Index: 1.5900 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: 0.1723
Cell Significance Index: 7.6200 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: 0.1641
Cell Significance Index: 12.5900 - Cell Name: direct pathway medium spiny neuron (CL4023026)
Fold Change: 0.1355
Cell Significance Index: 5.1300 - Cell Name: colon goblet cell (CL0009039)
Fold Change: 0.1353
Cell Significance Index: 13.3800 - Cell Name: cortical interneuron (CL0008031)
Fold Change: 0.1051
Cell Significance Index: 2.5200 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: 0.0997
Cell Significance Index: 4.6500 - Cell Name: sebum secreting cell (CL0000317)
Fold Change: 0.0969
Cell Significance Index: 6.8500 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: 0.0955
Cell Significance Index: 16.3100 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: 0.0760
Cell Significance Index: 3.5700 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 0.0743
Cell Significance Index: 67.0500 - Cell Name: early pro-B cell (CL0002046)
Fold Change: 0.0694
Cell Significance Index: 4.4700 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: 0.0322
Cell Significance Index: 1.4600 - Cell Name: lung endothelial cell (CL1001567)
Fold Change: 0.0321
Cell Significance Index: 1.6700 - Cell Name: odontoblast (CL0000060)
Fold Change: 0.0130
Cell Significance Index: 1.6700 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: -0.0010
Cell Significance Index: -1.9200 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: -0.0049
Cell Significance Index: -3.1300 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0101
Cell Significance Index: -7.4500 - Cell Name: pancreatic PP cell (CL0002275)
Fold Change: -0.0101
Cell Significance Index: -6.3000 - Cell Name: anterior lens cell (CL0002223)
Fold Change: -0.0140
Cell Significance Index: -25.8700 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: -0.0169
Cell Significance Index: -26.0900 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: -0.0193
Cell Significance Index: -26.2400 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: -0.0222
Cell Significance Index: -10.0600 - Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
Fold Change: -0.0254
Cell Significance Index: -18.5900 - Cell Name: basal cell of prostate epithelium (CL0002341)
Fold Change: -0.0305
Cell Significance Index: -0.8300 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: -0.0309
Cell Significance Index: -23.4100 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0319
Cell Significance Index: -18.0000 - Cell Name: preadipocyte (CL0002334)
Fold Change: -0.0328
Cell Significance Index: -0.6400 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: -0.0598
Cell Significance Index: -8.6900 - Cell Name: hippocampal pyramidal neuron (CL1001571)
Fold Change: -0.0722
Cell Significance Index: -2.0600 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.0771
Cell Significance Index: -7.8800 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: -0.0829
Cell Significance Index: -6.1800 - Cell Name: transit amplifying cell of colon (CL0009011)
Fold Change: -0.0902
Cell Significance Index: -2.8900 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.0940
Cell Significance Index: -19.7900 - Cell Name: lactocyte (CL0002325)
Fold Change: -0.0998
Cell Significance Index: -12.8900 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.1067
Cell Significance Index: -30.6900 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.1174
Cell Significance Index: -13.4500 - Cell Name: cerebellar granule cell (CL0001031)
Fold Change: -0.1220
Cell Significance Index: -2.0900 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: -0.1296
Cell Significance Index: -4.5600 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: -0.1582
Cell Significance Index: -4.2400 - Cell Name: epithelial cell of stomach (CL0002178)
Fold Change: -0.1708
Cell Significance Index: -19.9000 - Cell Name: Purkinje cell (CL0000121)
Fold Change: -0.1740
Cell Significance Index: -3.8100 - Cell Name: mesenchymal cell (CL0008019)
Fold Change: -0.1945
Cell Significance Index: -3.2600 - Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
Fold Change: -0.2146
Cell Significance Index: -4.5700 - Cell Name: granulosa cell (CL0000501)
Fold Change: -0.2206
Cell Significance Index: -5.8000 - Cell Name: pancreatic endocrine cell (CL0008024)
Fold Change: -0.2943
Cell Significance Index: -33.5900 - Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
Fold Change: -0.3095
Cell Significance Index: -10.7600 - Cell Name: skeletal muscle fiber (CL0008002)
Fold Change: -0.3233
Cell Significance Index: -8.3100 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: -0.3241
Cell Significance Index: -33.7500 - Cell Name: fibroblast of dermis (CL0002551)
Fold Change: -0.3397
Cell Significance Index: -7.1100 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: -0.3535
Cell Significance Index: -18.5600 - Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
Fold Change: -0.3684
Cell Significance Index: -29.1800 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: -0.3703
Cell Significance Index: -22.7000 - Cell Name: pro-T cell (CL0000827)
Fold Change: -0.3748
Cell Significance Index: -9.5800 - Cell Name: CD4-positive, alpha-beta memory T cell, CD45RO-positive (CL0001204)
Fold Change: -0.3783
Cell Significance Index: -11.1100 - Cell Name: leptomeningeal cell (CL0000708)
Fold Change: -0.4152
Cell Significance Index: -8.8800 - Cell Name: endothelial cell of placenta (CL0009092)
Fold Change: -0.4444
Cell Significance Index: -2.6900 - Cell Name: intestinal epithelial cell (CL0002563)
Fold Change: -0.4700
Cell Significance Index: -4.8700 - Cell Name: neutrophil progenitor cell (CL0000834)
Fold Change: -0.4862
Cell Significance Index: -13.0100 - Cell Name: peg cell (CL4033014)
Fold Change: -0.5312
Cell Significance Index: -12.2700 - Cell Name: centrilobular region hepatocyte (CL0019029)
Fold Change: -0.5735
Cell Significance Index: -9.6600 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: -0.5945
Cell Significance Index: -18.9400 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
Fold Change: -0.5993
Cell Significance Index: -19.6200 - Cell Name: CD14-positive, CD16-negative classical monocyte (CL0002057)
Fold Change: -0.6374
Cell Significance Index: -11.7800 - Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
Fold Change: -0.6865
Cell Significance Index: -14.5700
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 4253354016
Symbol: VTA1_HUMAN
Name: Vacuolar protein sorting-associated protein VTA1 homolog
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 11042152
Title: Cloning and functional analysis of cDNAs with open reading frames for 300 previously undefined genes expressed in CD34+ hematopoietic stem/progenitor cells.
PubMed ID: 11042152
DOI: 10.1101/gr.140200
PubMed ID: 11230166
Title: Towards a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs.
PubMed ID: 11230166
DOI: 10.1101/gr.gr1547r
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 14574404
Title: The DNA sequence and analysis of human chromosome 6.
PubMed ID: 14574404
DOI: 10.1038/nature02055
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 15644320
Title: The role of LIP5 and CHMP5 in multivesicular body formation and HIV-1 budding in mammalian cells.
PubMed ID: 15644320
PubMed ID: 17261583
Title: Targeting of AMSH to endosomes is required for epidermal growth factor receptor degradation.
PubMed ID: 17261583
PubMed ID: 18385515
Title: Novel interactions of ESCRT-III with LIP5 and VPS4 and their implications for ESCRT-III disassembly.
PubMed ID: 18385515
PubMed ID: 19413330
Title: Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach.
PubMed ID: 19413330
DOI: 10.1021/ac9004309
PubMed ID: 19129480
PubMed ID: 19129479
Title: Biochemical analyses of human IST1 and its function in cytokinesis.
PubMed ID: 19129479
PubMed ID: 21269460
Title: Initial characterization of the human central proteome.
PubMed ID: 21269460
PubMed ID: 21543490
Title: Mechanism of inhibition of retrovirus release from cells by interferon-induced gene ISG15.
PubMed ID: 21543490
DOI: 10.1128/jvi.02610-10
PubMed ID: 22223895
Title: Comparative large-scale characterisation of plant vs. mammal proteins reveals similar and idiosyncratic N-alpha acetylation features.
PubMed ID: 22223895
Sequence Information:
- Length: 307
- Mass: 33879
- Checksum: C7DE611E50B58BF9
- Sequence:
MAALAPLPPL PAQFKSIQHH LRTAQEHDKR DPVVAYYCRL YAMQTGMKID SKTPECRKFL SKLMDQLEAL KKQLGDNEAI TQEIVGCAHL ENYALKMFLY ADNEDRAGRF HKNMIKSFYT ASLLIDVITV FGELTDENVK HRKYARWKAT YIHNCLKNGE TPQAGPVGIE EDNDIEENED AGAASLPTQP TQPSSSSTYD PSNMPSGNYT GIQIPPGAHA PANTPAEVPH STGVASNTIQ PTPQTIPAID PALFNTISQG DVRLTPEDFA RAQKYCKYAG SALQYEDVST AVQNLQKALK LLTTGRE
Genular Protein ID: 516139316
Symbol: A0A087WY55_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 11237011
Title: Initial sequencing and analysis of the human genome.
PubMed ID: 11237011
DOI: 10.1038/35057062
PubMed ID: 11181995
PubMed ID: 14574404
Title: The DNA sequence and analysis of human chromosome 6.
PubMed ID: 14574404
DOI: 10.1038/nature02055
PubMed ID: 15496913
Title: Finishing the euchromatic sequence of the human genome.
PubMed ID: 15496913
DOI: 10.1038/nature03001
PubMed ID: 19413330
Title: Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach.
PubMed ID: 19413330
DOI: 10.1021/ac9004309
PubMed ID: 21269460
Title: Initial characterization of the human central proteome.
PubMed ID: 21269460
PubMed ID: 22223895
Title: Comparative large-scale characterisation of plant vs. mammal proteins reveals similar and idiosyncratic N-alpha acetylation features.
PubMed ID: 22223895
Sequence Information:
- Length: 280
- Mass: 31102
- Checksum: 96347EB4529D94A4
- Sequence:
MAALAPLPPL PAQFKSIQHH LRTAQEHDKR DPVVAYYCRL YAMQTGMKID SKTPECRKFL SKLMDQLEAL KKQLGDNEAI TQEIVGCAHL ENYALKMFLY ADNEDRAGRF HKNMIKSFYT ASLLIDVITV FGELTDENVK HRKYARWKAT YIHNCLKNGE TPQAGPVGIE EDNDIEENED AGAASLPTQP TQPSSSSTYD PSNMPSGNYT GIQIPPGAHA PANTPAEVPH STGDVRLTPE DFARAQKYCK YAGSALQYED VSTAVQNLQK ALKLLTTGRE
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.