Details for: SIX4
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: mucosal type mast cell (CL0000485)
Fold Change: 15.5320
Cell Significance Index: -6.3100 - Cell Name: ciliated cell of the bronchus (CL0002332)
Fold Change: 6.6405
Cell Significance Index: -6.3400 - Cell Name: epithelial cell of pancreas (CL0000083)
Fold Change: 1.8108
Cell Significance Index: 29.8400 - Cell Name: transit amplifying cell of colon (CL0009011)
Fold Change: 0.8172
Cell Significance Index: 26.1800 - Cell Name: cortical thymic epithelial cell (CL0002364)
Fold Change: 0.7049
Cell Significance Index: 5.8300 - Cell Name: basal cell of prostate epithelium (CL0002341)
Fold Change: 0.5999
Cell Significance Index: 16.3300 - Cell Name: type I muscle cell (CL0002211)
Fold Change: 0.5795
Cell Significance Index: 14.1400 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: 0.5398
Cell Significance Index: 28.0400 - Cell Name: thyroid follicular cell (CL0002258)
Fold Change: 0.4847
Cell Significance Index: 5.1500 - Cell Name: keratocyte (CL0002363)
Fold Change: 0.2616
Cell Significance Index: 4.1500 - Cell Name: respiratory goblet cell (CL0002370)
Fold Change: 0.2278
Cell Significance Index: 2.3500 - Cell Name: type II muscle cell (CL0002212)
Fold Change: 0.2244
Cell Significance Index: 3.6200 - Cell Name: cell in vitro (CL0001034)
Fold Change: 0.2234
Cell Significance Index: 122.0300 - Cell Name: skeletal muscle fiber (CL0008002)
Fold Change: 0.2221
Cell Significance Index: 5.7100 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 0.1980
Cell Significance Index: 32.2000 - Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
Fold Change: 0.1845
Cell Significance Index: 6.4100 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 0.1772
Cell Significance Index: 35.1600 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: 0.1663
Cell Significance Index: 29.9700 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: 0.1650
Cell Significance Index: 4.4200 - Cell Name: gut absorptive cell (CL0000677)
Fold Change: 0.1509
Cell Significance Index: 9.0600 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: 0.1491
Cell Significance Index: 6.9500 - Cell Name: epithelial cell of uterus (CL0002149)
Fold Change: 0.1247
Cell Significance Index: 1.7300 - Cell Name: peg cell (CL4033014)
Fold Change: 0.1247
Cell Significance Index: 2.8800 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: 0.1217
Cell Significance Index: 3.2500 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: 0.1179
Cell Significance Index: 14.5000 - Cell Name: fibroblast of mammary gland (CL0002555)
Fold Change: 0.1165
Cell Significance Index: 3.3400 - Cell Name: luminal cell of prostate epithelium (CL0002340)
Fold Change: 0.0966
Cell Significance Index: 1.0000 - Cell Name: odontoblast (CL0000060)
Fold Change: 0.0789
Cell Significance Index: 10.1100 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 0.0725
Cell Significance Index: 14.5400 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: 0.0526
Cell Significance Index: 2.4700 - Cell Name: skeletal muscle satellite stem cell (CL0008011)
Fold Change: 0.0431
Cell Significance Index: 0.4500 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: 0.0385
Cell Significance Index: 1.1100 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 0.0282
Cell Significance Index: 10.1200 - Cell Name: hair follicular keratinocyte (CL2000092)
Fold Change: 0.0169
Cell Significance Index: 7.4900 - Cell Name: colon goblet cell (CL0009039)
Fold Change: 0.0147
Cell Significance Index: 1.4500 - Cell Name: skeletal muscle myoblast (CL0000515)
Fold Change: 0.0138
Cell Significance Index: 0.1500 - Cell Name: GABAergic interneuron (CL0011005)
Fold Change: 0.0085
Cell Significance Index: 5.9100 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: 0.0016
Cell Significance Index: 0.2800 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: 0.0005
Cell Significance Index: 0.2300 - Cell Name: enteroendocrine cell of colon (CL0009042)
Fold Change: -0.0012
Cell Significance Index: -0.2300 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: -0.0023
Cell Significance Index: -4.4200 - Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
Fold Change: -0.0038
Cell Significance Index: -2.8100 - Cell Name: anterior lens cell (CL0002223)
Fold Change: -0.0038
Cell Significance Index: -6.9400 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: -0.0044
Cell Significance Index: -6.8000 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: -0.0048
Cell Significance Index: -3.0700 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: -0.0053
Cell Significance Index: -7.1600 - Cell Name: lactocyte (CL0002325)
Fold Change: -0.0088
Cell Significance Index: -1.1400 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: -0.0090
Cell Significance Index: -6.7900 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0091
Cell Significance Index: -6.7700 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: -0.0093
Cell Significance Index: -1.0200 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: -0.0095
Cell Significance Index: -1.3100 - Cell Name: epithelial cell of stomach (CL0002178)
Fold Change: -0.0103
Cell Significance Index: -1.2000 - Cell Name: sebum secreting cell (CL0000317)
Fold Change: -0.0107
Cell Significance Index: -0.7600 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0111
Cell Significance Index: -6.2700 - Cell Name: pancreatic PP cell (CL0002275)
Fold Change: -0.0121
Cell Significance Index: -7.5400 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.0141
Cell Significance Index: -4.0600 - Cell Name: salivary gland cell (CL0009005)
Fold Change: -0.0145
Cell Significance Index: -0.1800 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.0218
Cell Significance Index: -2.2300 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: -0.0227
Cell Significance Index: -0.3100 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: -0.0244
Cell Significance Index: -3.5400 - Cell Name: fibro/adipogenic progenitor cell (CL0009099)
Fold Change: -0.0244
Cell Significance Index: -1.2300 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.0353
Cell Significance Index: -7.4500 - Cell Name: paneth cell of epithelium of small intestine (CL1000343)
Fold Change: -0.0420
Cell Significance Index: -0.9100 - Cell Name: microfold cell of epithelium of small intestine (CL1000353)
Fold Change: -0.0461
Cell Significance Index: -3.1900 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.0468
Cell Significance Index: -5.3700 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: -0.0474
Cell Significance Index: -3.5300 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: -0.0490
Cell Significance Index: -2.2200 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: -0.0667
Cell Significance Index: -6.9500 - Cell Name: transit amplifying cell of small intestine (CL0009012)
Fold Change: -0.0718
Cell Significance Index: -1.4900 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: -0.0731
Cell Significance Index: -5.6100 - Cell Name: CD14-low, CD16-positive monocyte (CL0002396)
Fold Change: -0.0780
Cell Significance Index: -1.8900 - Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
Fold Change: -0.0859
Cell Significance Index: -6.8000 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: -0.0920
Cell Significance Index: -2.5700 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: -0.0936
Cell Significance Index: -5.9000 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: -0.0967
Cell Significance Index: -6.5000 - Cell Name: neuron associated cell (CL0000095)
Fold Change: -0.1026
Cell Significance Index: -4.2000 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: -0.1119
Cell Significance Index: -6.2800 - Cell Name: lung endothelial cell (CL1001567)
Fold Change: -0.1148
Cell Significance Index: -5.9800 - Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
Fold Change: -0.1216
Cell Significance Index: -2.5800 - Cell Name: leptomeningeal cell (CL0000708)
Fold Change: -0.1326
Cell Significance Index: -2.8400 - Cell Name: stratified epithelial cell (CL0000079)
Fold Change: -0.1340
Cell Significance Index: -4.9200 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: -0.1409
Cell Significance Index: -7.4000 - Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
Fold Change: -0.1410
Cell Significance Index: -4.9400 - Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
Fold Change: -0.1427
Cell Significance Index: -3.0400 - Cell Name: mesenchymal cell (CL0008019)
Fold Change: -0.1458
Cell Significance Index: -2.4400 - Cell Name: fibroblast of dermis (CL0002551)
Fold Change: -0.1495
Cell Significance Index: -3.1300 - Cell Name: BEST4+ enteroycte (CL4030026)
Fold Change: -0.1603
Cell Significance Index: -2.4200 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: -0.1637
Cell Significance Index: -7.2400 - Cell Name: hippocampal pyramidal neuron (CL1001571)
Fold Change: -0.1647
Cell Significance Index: -4.7000 - Cell Name: ciliated cell (CL0000064)
Fold Change: -0.1741
Cell Significance Index: -1.8900 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
Fold Change: -0.1775
Cell Significance Index: -5.8100 - Cell Name: direct pathway medium spiny neuron (CL4023026)
Fold Change: -0.1883
Cell Significance Index: -7.1300 - Cell Name: enteroendocrine cell of small intestine (CL0009006)
Fold Change: -0.1888
Cell Significance Index: -4.7200 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: -0.1953
Cell Significance Index: -6.2200 - Cell Name: serous secreting cell of bronchus submucosal gland (CL4033005)
Fold Change: -0.2009
Cell Significance Index: -2.0100 - Cell Name: cerebellar granule cell (CL0001031)
Fold Change: -0.2019
Cell Significance Index: -3.4600 - Cell Name: granulosa cell (CL0000501)
Fold Change: -0.2023
Cell Significance Index: -5.3200 - Cell Name: medial ganglionic eminence derived interneuron (CL4023063)
Fold Change: -0.2039
Cell Significance Index: -2.9200 - Cell Name: epithelial cell of nephron (CL1000449)
Fold Change: -0.2059
Cell Significance Index: -1.7500 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: -0.2083
Cell Significance Index: -7.3200
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 1350987809
Symbol: SIX4_HUMAN
Name: Homeobox protein SIX4
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 10640827
Title: Structure and chromosome mapping of the human SIX4 and murine Six4 genes.
PubMed ID: 10640827
DOI: 10.1159/000015407
PubMed ID: 12508121
Title: The DNA sequence and analysis of human chromosome 14.
PubMed ID: 12508121
DOI: 10.1038/nature01348
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 14966291
Title: Quantitative proteomic identification of six4 as the trex-binding factor in the muscle creatine kinase enhancer.
PubMed ID: 14966291
PubMed ID: 17525332
Title: ATM and ATR substrate analysis reveals extensive protein networks responsive to DNA damage.
PubMed ID: 17525332
PubMed ID: 21406692
Title: System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation.
PubMed ID: 21406692
PubMed ID: 16959974
Title: The consensus coding sequences of human breast and colorectal cancers.
PubMed ID: 16959974
Sequence Information:
- Length: 781
- Mass: 82933
- Checksum: 0054080AFF7BFF7E
- Sequence:
MSSSSPTGQI ASAADIKQEN GMESASEGQE AHREVAGGAA VGLSPPAPAP FPLEPGDAAT AAARVSGEEG AVAAAAAGAA ADQVQLHSEL LGRHHHAAAA AAQTPLAFSP DHVACVCEAL QQGGNLDRLA RFLWSLPQSD LLRGNESLLK ARALVAFHQG IYPELYSILE SHSFESANHP LLQQLWYKAR YTEAERARGR PLGAVDKYRL RRKFPLPRTI WDGEETVYCF KEKSRNALKE LYKQNRYPSP AEKRHLAKIT GLSLTQVSNW FKNRRQRDRN PSETQSKSES DGNPSTEDES SKGHEDLSPH PLSSSSDGIT NLSLSSHMEP VYMQQIGNAK ISLSSSGVLL NGSLVPASTS PVFLNGNSFI QGPSGVILNG LNVGNTQAVA LNPPKMSSNI VSNGISMTDI LGSTSQDVKE FKVLQSSANS ATTTSYSPSV PVSFPGLIPS TEVKREGIQT VASQDGGSVV TFTTPVQINQ YGIVQIPNSG ANSQFLNGSI GFSPLQLPPV SVAASQGNIS VSSSTSDGST FTSESTTVQQ GKVFLSSLAP SAVVYTVPNT GQTIGSVKQE GLERSLVFSQ LMPVNQNAQV NANLSSENIS GSGLHPLASS LVNVSPTHNF SLSPSTLLNP TELNRDIADS QPMSAPVASK STVTSVSNTN YATLQNCSLI TGQDLLSVPM TQAALGEIVP TAEDQVGHPS PAVHQDFVQE HRLVLQSVAN MKENFLSNSE SKATSSLMML DSKSKYVLDG MVDTVCEDLE TDKKELAKLQ TVQLDEDMQD L
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.