Details for: RPS11

Gene ID: 6205

Symbol: RPS11

Ensembl ID: ENSG00000142534

Description: ribosomal protein S11

Associated with

Cells (max top 100)

(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)

  • Cell Name: embryonic stem cell (CL0002322)
    Fold Change: 663.1669
    Cell Significance Index: -273.1900
  • Cell Name: mucosal type mast cell (CL0000485)
    Fold Change: 559.5717
    Cell Significance Index: -227.3300
  • Cell Name: smooth muscle fiber of ileum (CL1000278)
    Fold Change: 537.8687
    Cell Significance Index: -253.9400
  • Cell Name: peripheral blood mononuclear cell (CL2000001)
    Fold Change: 495.3097
    Cell Significance Index: -254.7800
  • Cell Name: ileal goblet cell (CL1000326)
    Fold Change: 380.9673
    Cell Significance Index: -255.6400
  • Cell Name: ciliated cell of the bronchus (CL0002332)
    Fold Change: 243.6625
    Cell Significance Index: -232.6400
  • Cell Name: CD8-alpha-beta-positive, alpha-beta intraepithelial T cell (CL0000796)
    Fold Change: 59.4264
    Cell Significance Index: -159.2000
  • Cell Name: basal cell of epidermis (CL0002187)
    Fold Change: 16.2960
    Cell Significance Index: 247.5000
  • Cell Name: pro-T cell (CL0000827)
    Fold Change: 14.7428
    Cell Significance Index: 376.6300
  • Cell Name: abnormal cell (CL0001061)
    Fold Change: 13.9566
    Cell Significance Index: 1425.6700
  • Cell Name: neutrophil progenitor cell (CL0000834)
    Fold Change: 11.9902
    Cell Significance Index: 320.7300
  • Cell Name: acinar cell of salivary gland (CL0002623)
    Fold Change: 10.3030
    Cell Significance Index: 480.3800
  • Cell Name: stromal cell of ovary (CL0002132)
    Fold Change: 8.4841
    Cell Significance Index: 1165.1100
  • Cell Name: intermediate cell of urothelium (CL4030055)
    Fold Change: 8.1407
    Cell Significance Index: 1467.5200
  • Cell Name: basal cell of urothelium (CL1000486)
    Fold Change: 8.0367
    Cell Significance Index: 988.1800
  • Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
    Fold Change: 7.7066
    Cell Significance Index: 362.2100
  • Cell Name: sebum secreting cell (CL0000317)
    Fold Change: 7.3435
    Cell Significance Index: 519.3600
  • Cell Name: cell in vitro (CL0001034)
    Fold Change: 7.2780
    Cell Significance Index: 3974.6800
  • Cell Name: lactocyte (CL0002325)
    Fold Change: 6.9886
    Cell Significance Index: 902.8800
  • Cell Name: hair follicular keratinocyte (CL2000092)
    Fold Change: 6.7729
    Cell Significance Index: 2994.4800
  • Cell Name: basal cell of prostate epithelium (CL0002341)
    Fold Change: 6.2504
    Cell Significance Index: 170.1300
  • Cell Name: lung endothelial cell (CL1001567)
    Fold Change: 6.1571
    Cell Significance Index: 320.7200
  • Cell Name: early pro-B cell (CL0002046)
    Fold Change: 6.0672
    Cell Significance Index: 391.4300
  • Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
    Fold Change: 6.0671
    Cell Significance Index: 210.8300
  • Cell Name: fibroblast of dermis (CL0002551)
    Fold Change: 5.9642
    Cell Significance Index: 124.8400
  • Cell Name: fibroblast of mammary gland (CL0002555)
    Fold Change: 5.9329
    Cell Significance Index: 170.0700
  • Cell Name: peg cell (CL4033014)
    Fold Change: 5.5477
    Cell Significance Index: 128.1700
  • Cell Name: endothelial cell of venule (CL1000414)
    Fold Change: 5.4743
    Cell Significance Index: 62.1900
  • Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
    Fold Change: 5.3127
    Cell Significance Index: 395.9500
  • Cell Name: vascular lymphangioblast (CL0005022)
    Fold Change: 5.0277
    Cell Significance Index: 88.8500
  • Cell Name: odontoblast (CL0000060)
    Fold Change: 4.7721
    Cell Significance Index: 611.7600
  • Cell Name: umbrella cell of urothelium (CL4030056)
    Fold Change: 4.6798
    Cell Significance Index: 43.1000
  • Cell Name: granulosa cell (CL0000501)
    Fold Change: 4.6408
    Cell Significance Index: 122.0300
  • Cell Name: pancreatic acinar cell (CL0002064)
    Fold Change: 4.5659
    Cell Significance Index: 779.6600
  • Cell Name: tonsil germinal center B cell (CL2000006)
    Fold Change: 4.3694
    Cell Significance Index: 515.2900
  • Cell Name: enterocyte of epithelium of small intestine (CL1000334)
    Fold Change: 4.1044
    Cell Significance Index: 118.2600
  • Cell Name: CD14-positive, CD16-negative classical monocyte (CL0002057)
    Fold Change: 3.5320
    Cell Significance Index: 65.2800
  • Cell Name: skeletal muscle myoblast (CL0000515)
    Fold Change: 3.1707
    Cell Significance Index: 34.4700
  • Cell Name: tuft cell of colon (CL0009041)
    Fold Change: 2.7877
    Cell Significance Index: 2517.0800
  • Cell Name: placental villous trophoblast (CL2000060)
    Fold Change: 2.6148
    Cell Significance Index: 69.8200
  • Cell Name: CD4-positive, alpha-beta memory T cell, CD45RO-positive (CL0001204)
    Fold Change: 2.4686
    Cell Significance Index: 72.5000
  • Cell Name: colon goblet cell (CL0009039)
    Fold Change: 2.2989
    Cell Significance Index: 227.4100
  • Cell Name: kidney cell (CL1000497)
    Fold Change: 2.0628
    Cell Significance Index: 16.4700
  • Cell Name: pulmonary alveolar epithelial cell (CL0000322)
    Fold Change: 1.9701
    Cell Significance Index: 1491.1700
  • Cell Name: neoplastic cell (CL0001063)
    Fold Change: 1.6398
    Cell Significance Index: 325.4200
  • Cell Name: enterocyte of epithelium of large intestine (CL0002071)
    Fold Change: 1.6255
    Cell Significance Index: 73.6800
  • Cell Name: bladder urothelial cell (CL1001428)
    Fold Change: 1.5113
    Cell Significance Index: 78.5100
  • Cell Name: oral mucosa squamous cell (CL1001576)
    Fold Change: 1.1393
    Cell Significance Index: 9.7900
  • Cell Name: enteroendocrine cell of colon (CL0009042)
    Fold Change: 0.9963
    Cell Significance Index: 189.6100
  • Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
    Fold Change: 0.5670
    Cell Significance Index: 415.6900
  • Cell Name: retinal progenitor cell (CL0002672)
    Fold Change: 0.4065
    Cell Significance Index: 22.8100
  • Cell Name: glycinergic neuron (CL1001509)
    Fold Change: 0.0821
    Cell Significance Index: 4.3100
  • Cell Name: pigmented epithelial cell (CL0000529)
    Fold Change: -0.0783
    Cell Significance Index: -147.4000
  • Cell Name: pancreatic A cell (CL0000171)
    Fold Change: -0.1017
    Cell Significance Index: -75.3100
  • Cell Name: pancreatic PP cell (CL0002275)
    Fold Change: -0.1385
    Cell Significance Index: -86.5000
  • Cell Name: anterior lens cell (CL0002223)
    Fold Change: -0.1497
    Cell Significance Index: -276.0600
  • Cell Name: type B pancreatic cell (CL0000169)
    Fold Change: -0.1615
    Cell Significance Index: -91.1000
  • Cell Name: lens epithelial cell (CL0002224)
    Fold Change: -0.1828
    Cell Significance Index: -281.3900
  • Cell Name: dopaminergic neuron (CL0000700)
    Fold Change: -0.2073
    Cell Significance Index: -59.6500
  • Cell Name: secondary lens fiber (CL0002225)
    Fold Change: -0.2314
    Cell Significance Index: -314.6200
  • Cell Name: epithelial cell of small intestine (CL0002254)
    Fold Change: -0.2834
    Cell Significance Index: -46.1000
  • Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
    Fold Change: -0.3127
    Cell Significance Index: -198.5900
  • Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
    Fold Change: -0.3127
    Cell Significance Index: -112.1500
  • Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
    Fold Change: -0.4127
    Cell Significance Index: -82.7800
  • Cell Name: ciliary muscle cell (CL1000443)
    Fold Change: -0.5117
    Cell Significance Index: -232.2400
  • Cell Name: pancreatic D cell (CL0000173)
    Fold Change: -0.5474
    Cell Significance Index: -115.2900
  • Cell Name: intestinal crypt stem cell of colon (CL0009043)
    Fold Change: -0.5570
    Cell Significance Index: -60.5900
  • Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
    Fold Change: -0.6573
    Cell Significance Index: -52.0600
  • Cell Name: forebrain neuroblast (CL1000042)
    Fold Change: -0.7056
    Cell Significance Index: -43.3700
  • Cell Name: eye photoreceptor cell (CL0000287)
    Fold Change: -0.8201
    Cell Significance Index: -51.6900
  • Cell Name: transit amplifying cell of colon (CL0009011)
    Fold Change: -0.9114
    Cell Significance Index: -29.1900
  • Cell Name: interstitial cell of ovary (CL0002094)
    Fold Change: -0.9893
    Cell Significance Index: -12.6700
  • Cell Name: pancreatic ductal cell (CL0002079)
    Fold Change: -0.9971
    Cell Significance Index: -114.2300
  • Cell Name: pancreatic endocrine cell (CL0008024)
    Fold Change: -1.3349
    Cell Significance Index: -152.3800
  • Cell Name: pigmented ciliary epithelial cell (CL0002303)
    Fold Change: -1.5369
    Cell Significance Index: -223.4100
  • Cell Name: microfold cell of epithelium of small intestine (CL1000353)
    Fold Change: -1.8703
    Cell Significance Index: -129.3400
  • Cell Name: mesenchymal cell (CL0008019)
    Fold Change: -1.8882
    Cell Significance Index: -31.6000
  • Cell Name: endothelial cell of placenta (CL0009092)
    Fold Change: -1.9133
    Cell Significance Index: -11.5600
  • Cell Name: enteroendocrine cell of small intestine (CL0009006)
    Fold Change: -2.2907
    Cell Significance Index: -57.2600
  • Cell Name: paneth cell of colon (CL0009009)
    Fold Change: -2.3298
    Cell Significance Index: -34.9100
  • Cell Name: CD4-positive, alpha-beta thymocyte (CL0000810)
    Fold Change: -2.3540
    Cell Significance Index: -40.5800
  • Cell Name: small intestine goblet cell (CL1000495)
    Fold Change: -2.3661
    Cell Significance Index: -83.1400
  • Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
    Fold Change: -2.5287
    Cell Significance Index: -263.3000
  • Cell Name: conjunctival epithelial cell (CL1000432)
    Fold Change: -2.9567
    Cell Significance Index: -40.3400
  • Cell Name: cardiac muscle myoblast (CL0000513)
    Fold Change: -3.4280
    Cell Significance Index: -263.0600
  • Cell Name: intestinal tuft cell (CL0019032)
    Fold Change: -3.4391
    Cell Significance Index: -210.8500
  • Cell Name: hippocampal granule cell (CL0001033)
    Fold Change: -3.6893
    Cell Significance Index: -248.0700
  • Cell Name: paneth cell of epithelium of small intestine (CL1000343)
    Fold Change: -3.7743
    Cell Significance Index: -81.7700
  • Cell Name: luminal hormone-sensing cell of mammary gland (CL4033058)
    Fold Change: -4.8504
    Cell Significance Index: -29.8500
  • Cell Name: kidney epithelial cell (CL0002518)
    Fold Change: -4.8889
    Cell Significance Index: -144.0000
  • Cell Name: retinal rod cell (CL0000604)
    Fold Change: -4.9821
    Cell Significance Index: -59.3900
  • Cell Name: extravillous trophoblast (CL0008036)
    Fold Change: -5.0906
    Cell Significance Index: -31.6300
  • Cell Name: preadipocyte (CL0002334)
    Fold Change: -5.5920
    Cell Significance Index: -109.1400
  • Cell Name: perivascular cell (CL4033054)
    Fold Change: -5.7231
    Cell Significance Index: -26.4300
  • Cell Name: cortical cell of adrenal gland (CL0002097)
    Fold Change: -5.9130
    Cell Significance Index: -158.4400
  • Cell Name: cerebellar granule cell (CL0001031)
    Fold Change: -5.9689
    Cell Significance Index: -102.2900
  • Cell Name: indirect pathway medium spiny neuron (CL4023029)
    Fold Change: -6.0006
    Cell Significance Index: -265.4200
  • Cell Name: stratified epithelial cell (CL0000079)
    Fold Change: -6.0745
    Cell Significance Index: -222.9900
  • Cell Name: theca cell (CL0000503)
    Fold Change: -6.2161
    Cell Significance Index: -36.5200
  • Cell Name: transit amplifying cell of small intestine (CL0009012)
    Fold Change: -6.2442
    Cell Significance Index: -129.5300

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Other Information

**Key Characteristics** RPS11 is a highly conserved protein, with high sequence similarity across species. It is a component of the 40S ribosomal subunit, which is responsible for the initiation of translation. RPS11 is involved in the binding of the cap-binding complex and eIFs, leading to the recruitment of the 43S complex and the initiation of translation. The protein also plays a role in the regulation of translation initiation, responding to amino acid availability and stress signals. RPS11 is highly expressed in cells that require rapid protein synthesis, such as epithelial cells and immune cells. **Pathways and Functions** RPS11 is involved in various signaling pathways, including: 1. **Translation initiation**: RPS11 is essential for the recruitment of the 43S complex and the initiation of translation. 2. **Amino acid sensing**: RPS11 responds to amino acid availability, regulating translation initiation in response to nutritional cues. 3. **Stress response**: RPS11 is involved in the regulation of translation in response to stress signals, such as hypoxia and nutrient deprivation. 4. **Immune response**: RPS11 is highly expressed in immune cells, where it plays a role in the regulation of translation during immune responses. 5. **Cell growth and differentiation**: RPS11 is involved in the regulation of cell growth and differentiation, particularly in epithelial cells. **Clinical Significance** RPS11 has been implicated in various diseases, including: 1. **Cancer**: RPS11 is overexpressed in various types of cancer, including lung, breast, and colon cancer, suggesting its role in tumorigenesis. 2. **Neurodegenerative diseases**: RPS11 has been implicated in neurodegenerative diseases, such as Alzheimer's and Parkinson's disease, where it may play a role in the regulation of protein synthesis. 3. **Infectious diseases**: RPS11 has been shown to be involved in the regulation of translation in response to viral infections, such as influenza and SARS-CoV-2. 4. **Metabolic disorders**: RPS11 has been implicated in metabolic disorders, such as obesity and diabetes, where it may play a role in the regulation of protein synthesis and metabolism. In conclusion, RPS11 is a crucial component of the eukaryotic ribosome, playing a pivotal role in the regulation of protein synthesis. Its involvement in various signaling pathways and its high expression in different cell types make it a key regulator of cellular homeostasis. Further studies are needed to fully elucidate the role of RPS11 in disease and to explore its therapeutic potential.

Genular Protein ID: 2087485145

Symbol: RS11_HUMAN

Name: 40S ribosomal protein S11

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 3267208

Title: Sequence of a cloned cDNA encoding human ribosomal protein S11.

PubMed ID: 3267208

DOI: 10.1093/nar/16.3.1205

PubMed ID: 10580157

Title: Gene organization and sequence of the region containing the ribosomal protein genes RPL13A and RPS11 in the human genome and conserved features in the mouse genome.

PubMed ID: 10580157

DOI: 10.1016/s0378-1119(99)00429-1

PubMed ID: 14702039

Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.

PubMed ID: 14702039

DOI: 10.1038/ng1285

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 8706699

Title: Characterization of the human small-ribosomal-subunit proteins by N-terminal and internal sequencing, and mass spectrometry.

PubMed ID: 8706699

DOI: 10.1111/j.1432-1033.1996.0144u.x

PubMed ID: 9582194

Title: A map of 75 human ribosomal protein genes.

PubMed ID: 9582194

DOI: 10.1101/gr.8.5.509

PubMed ID: 19413330

Title: Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach.

PubMed ID: 19413330

DOI: 10.1021/ac9004309

PubMed ID: 19608861

Title: Lysine acetylation targets protein complexes and co-regulates major cellular functions.

PubMed ID: 19608861

DOI: 10.1126/science.1175371

PubMed ID: 21269460

Title: Initial characterization of the human central proteome.

PubMed ID: 21269460

DOI: 10.1186/1752-0509-5-17

PubMed ID: 21044946

Title: Site-specific analysis of protein S-acylation by resin-assisted capture.

PubMed ID: 21044946

DOI: 10.1194/jlr.d011106

PubMed ID: 22223895

Title: Comparative large-scale characterisation of plant vs. mammal proteins reveals similar and idiosyncratic N-alpha acetylation features.

PubMed ID: 22223895

DOI: 10.1074/mcp.m111.015131

PubMed ID: 22814378

Title: N-terminal acetylome analyses and functional insights of the N-terminal acetyltransferase NatB.

PubMed ID: 22814378

DOI: 10.1073/pnas.1210303109

PubMed ID: 23186163

Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.

PubMed ID: 23186163

DOI: 10.1021/pr300630k

PubMed ID: 24524803

Title: A new system for naming ribosomal proteins.

PubMed ID: 24524803

DOI: 10.1016/j.sbi.2014.01.002

PubMed ID: 24275569

Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.

PubMed ID: 24275569

DOI: 10.1016/j.jprot.2013.11.014

PubMed ID: 25944712

Title: N-terminome analysis of the human mitochondrial proteome.

PubMed ID: 25944712

DOI: 10.1002/pmic.201400617

PubMed ID: 23636399

Title: Structures of the human and Drosophila 80S ribosome.

PubMed ID: 23636399

DOI: 10.1038/nature12104

PubMed ID: 34516797

Title: Nucleolar maturation of the human small subunit processome.

PubMed ID: 34516797

DOI: 10.1126/science.abj5338

Sequence Information:

  • Length: 158
  • Mass: 18431
  • Checksum: 9FB75DC1D99614B0
  • Sequence:
  • MADIQTERAY QKQPTIFQNK KRVLLGETGK EKLPRYYKNI GLGFKTPKEA IEGTYIDKKC 
    PFTGNVSIRG RILSGVVTKM KMQRTIVIRR DYLHYIRKYN RFEKRHKNMS VHLSPCFRDV 
    QIGDIVTVGE CRPLSKTVRF NVLKVTKAAG TKKQFQKF

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.