Details for: SETMAR

Gene ID: 6419

Symbol: SETMAR

Ensembl ID: ENSG00000170364

Description: SET domain and mariner transposase fusion gene

Associated with

Cells (max top 100)

(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)

  • Cell Name: polychromatophilic erythroblast (CL0000550)
    Fold Change: 76.5051
    Cell Significance Index: -11.9000
  • Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
    Fold Change: 40.7265
    Cell Significance Index: -10.3300
  • Cell Name: smooth muscle fiber of ileum (CL1000278)
    Fold Change: 26.6456
    Cell Significance Index: -12.5800
  • Cell Name: mucosal type mast cell (CL0000485)
    Fold Change: 24.7503
    Cell Significance Index: -10.0600
  • Cell Name: ciliated cell of the bronchus (CL0002332)
    Fold Change: 10.5840
    Cell Significance Index: -10.1100
  • Cell Name: orthochromatic erythroblast (CL0000552)
    Fold Change: 10.1382
    Cell Significance Index: -12.5000
  • Cell Name: CD8-alpha-beta-positive, alpha-beta intraepithelial T cell (CL0000796)
    Fold Change: 4.5019
    Cell Significance Index: -12.0600
  • Cell Name: stromal cell of bone marrow (CL0010001)
    Fold Change: 3.2209
    Cell Significance Index: -12.7100
  • Cell Name: epidermal Langerhans cell (CL0002457)
    Fold Change: 2.1292
    Cell Significance Index: -4.6600
  • Cell Name: intestinal crypt stem cell of colon (CL0009043)
    Fold Change: 0.6800
    Cell Significance Index: 73.9700
  • Cell Name: tuft cell of colon (CL0009041)
    Fold Change: 0.6569
    Cell Significance Index: 593.1400
  • Cell Name: bladder urothelial cell (CL1001428)
    Fold Change: 0.5396
    Cell Significance Index: 28.0300
  • Cell Name: epithelial cell of small intestine (CL0002254)
    Fold Change: 0.4815
    Cell Significance Index: 78.3100
  • Cell Name: microfold cell of epithelium of small intestine (CL1000353)
    Fold Change: 0.3286
    Cell Significance Index: 22.7300
  • Cell Name: pro-T cell (CL0000827)
    Fold Change: 0.3218
    Cell Significance Index: 8.2200
  • Cell Name: sebum secreting cell (CL0000317)
    Fold Change: 0.3163
    Cell Significance Index: 22.3700
  • Cell Name: neoplastic cell (CL0001063)
    Fold Change: 0.2690
    Cell Significance Index: 53.3900
  • Cell Name: enterocyte of epithelium of small intestine (CL1000334)
    Fold Change: 0.2593
    Cell Significance Index: 7.4700
  • Cell Name: epithelial cell of stomach (CL0002178)
    Fold Change: 0.2476
    Cell Significance Index: 28.8500
  • Cell Name: basal cell of prostate epithelium (CL0002341)
    Fold Change: 0.2439
    Cell Significance Index: 6.6400
  • Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
    Fold Change: 0.2417
    Cell Significance Index: 48.4800
  • Cell Name: colon goblet cell (CL0009039)
    Fold Change: 0.2312
    Cell Significance Index: 22.8700
  • Cell Name: intermediate cell of urothelium (CL4030055)
    Fold Change: 0.2253
    Cell Significance Index: 40.6200
  • Cell Name: cortical cell of adrenal gland (CL0002097)
    Fold Change: 0.2179
    Cell Significance Index: 5.8400
  • Cell Name: retinal progenitor cell (CL0002672)
    Fold Change: 0.2138
    Cell Significance Index: 12.0000
  • Cell Name: conjunctival epithelial cell (CL1000432)
    Fold Change: 0.1898
    Cell Significance Index: 2.5900
  • Cell Name: paneth cell of epithelium of small intestine (CL1000343)
    Fold Change: 0.1800
    Cell Significance Index: 3.9000
  • Cell Name: hair follicular keratinocyte (CL2000092)
    Fold Change: 0.1667
    Cell Significance Index: 73.6900
  • Cell Name: stromal cell of ovary (CL0002132)
    Fold Change: 0.1577
    Cell Significance Index: 21.6500
  • Cell Name: preadipocyte (CL0002334)
    Fold Change: 0.1501
    Cell Significance Index: 2.9300
  • Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
    Fold Change: 0.1389
    Cell Significance Index: 49.8300
  • Cell Name: cell in vitro (CL0001034)
    Fold Change: 0.1315
    Cell Significance Index: 71.8000
  • Cell Name: enteroendocrine cell of colon (CL0009042)
    Fold Change: 0.1149
    Cell Significance Index: 21.8700
  • Cell Name: enterocyte of epithelium of large intestine (CL0002071)
    Fold Change: 0.1145
    Cell Significance Index: 5.1900
  • Cell Name: acinar cell of salivary gland (CL0002623)
    Fold Change: 0.1137
    Cell Significance Index: 5.3000
  • Cell Name: cardiac muscle myoblast (CL0000513)
    Fold Change: 0.1002
    Cell Significance Index: 7.6900
  • Cell Name: skeletal muscle fiber (CL0008002)
    Fold Change: 0.0988
    Cell Significance Index: 2.5400
  • Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
    Fold Change: 0.0809
    Cell Significance Index: 2.2600
  • Cell Name: GABAergic interneuron (CL0011005)
    Fold Change: 0.0772
    Cell Significance Index: 53.3600
  • Cell Name: adipocyte of breast (CL0002617)
    Fold Change: 0.0659
    Cell Significance Index: 0.8300
  • Cell Name: basal cell of urothelium (CL1000486)
    Fold Change: 0.0657
    Cell Significance Index: 8.0800
  • Cell Name: forebrain neuroblast (CL1000042)
    Fold Change: 0.0390
    Cell Significance Index: 2.4000
  • Cell Name: mesenchymal cell (CL0008019)
    Fold Change: 0.0173
    Cell Significance Index: 0.2900
  • Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
    Fold Change: 0.0136
    Cell Significance Index: 0.2900
  • Cell Name: pigmented epithelial cell (CL0000529)
    Fold Change: 0.0121
    Cell Significance Index: 22.8000
  • Cell Name: lactocyte (CL0002325)
    Fold Change: 0.0089
    Cell Significance Index: 1.1500
  • Cell Name: anterior lens cell (CL0002223)
    Fold Change: 0.0073
    Cell Significance Index: 13.4300
  • Cell Name: eye photoreceptor cell (CL0000287)
    Fold Change: 0.0048
    Cell Significance Index: 0.3000
  • Cell Name: lens epithelial cell (CL0002224)
    Fold Change: 0.0019
    Cell Significance Index: 2.8900
  • Cell Name: small intestine goblet cell (CL1000495)
    Fold Change: 0.0011
    Cell Significance Index: 0.0400
  • Cell Name: secondary lens fiber (CL0002225)
    Fold Change: 0.0006
    Cell Significance Index: 0.8700
  • Cell Name: ciliary muscle cell (CL1000443)
    Fold Change: 0.0000
    Cell Significance Index: 0.0100
  • Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
    Fold Change: -0.0001
    Cell Significance Index: -0.0100
  • Cell Name: odontoblast (CL0000060)
    Fold Change: -0.0009
    Cell Significance Index: -0.1100
  • Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
    Fold Change: -0.0036
    Cell Significance Index: -2.6300
  • Cell Name: placental villous trophoblast (CL2000060)
    Fold Change: -0.0056
    Cell Significance Index: -0.1500
  • Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
    Fold Change: -0.0073
    Cell Significance Index: -4.6300
  • Cell Name: pancreatic acinar cell (CL0002064)
    Fold Change: -0.0100
    Cell Significance Index: -1.7100
  • Cell Name: pulmonary alveolar epithelial cell (CL0000322)
    Fold Change: -0.0124
    Cell Significance Index: -9.4200
  • Cell Name: pancreatic A cell (CL0000171)
    Fold Change: -0.0140
    Cell Significance Index: -10.3600
  • Cell Name: early pro-B cell (CL0002046)
    Fold Change: -0.0152
    Cell Significance Index: -0.9800
  • Cell Name: type B pancreatic cell (CL0000169)
    Fold Change: -0.0208
    Cell Significance Index: -11.7300
  • Cell Name: pancreatic PP cell (CL0002275)
    Fold Change: -0.0225
    Cell Significance Index: -14.0800
  • Cell Name: pigmented ciliary epithelial cell (CL0002303)
    Fold Change: -0.0263
    Cell Significance Index: -3.8300
  • Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
    Fold Change: -0.0296
    Cell Significance Index: -1.0300
  • Cell Name: dopaminergic neuron (CL0000700)
    Fold Change: -0.0321
    Cell Significance Index: -9.2500
  • Cell Name: indirect pathway medium spiny neuron (CL4023029)
    Fold Change: -0.0348
    Cell Significance Index: -1.5400
  • Cell Name: pancreatic ductal cell (CL0002079)
    Fold Change: -0.0362
    Cell Significance Index: -4.1500
  • Cell Name: microcirculation associated smooth muscle cell (CL0008035)
    Fold Change: -0.0393
    Cell Significance Index: -0.3300
  • Cell Name: tonsil germinal center B cell (CL2000006)
    Fold Change: -0.0454
    Cell Significance Index: -5.3500
  • Cell Name: abnormal cell (CL0001061)
    Fold Change: -0.0475
    Cell Significance Index: -4.8600
  • Cell Name: transit amplifying cell of colon (CL0009011)
    Fold Change: -0.0506
    Cell Significance Index: -1.6200
  • Cell Name: neutrophil progenitor cell (CL0000834)
    Fold Change: -0.0523
    Cell Significance Index: -1.4000
  • Cell Name: direct pathway medium spiny neuron (CL4023026)
    Fold Change: -0.0578
    Cell Significance Index: -2.1900
  • Cell Name: lung endothelial cell (CL1001567)
    Fold Change: -0.0612
    Cell Significance Index: -3.1900
  • Cell Name: hippocampal granule cell (CL0001033)
    Fold Change: -0.0631
    Cell Significance Index: -4.2500
  • Cell Name: pancreatic D cell (CL0000173)
    Fold Change: -0.0659
    Cell Significance Index: -13.8800
  • Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
    Fold Change: -0.0664
    Cell Significance Index: -3.1200
  • Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
    Fold Change: -0.1003
    Cell Significance Index: -10.4400
  • Cell Name: fibroblast of dermis (CL0002551)
    Fold Change: -0.1046
    Cell Significance Index: -2.1900
  • Cell Name: cardiac muscle cell (CL0000746)
    Fold Change: -0.1091
    Cell Significance Index: -1.6100
  • Cell Name: skeletal muscle fibroblast (CL0011027)
    Fold Change: -0.1122
    Cell Significance Index: -0.7600
  • Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
    Fold Change: -0.1165
    Cell Significance Index: -9.2300
  • Cell Name: glycinergic neuron (CL1001509)
    Fold Change: -0.1263
    Cell Significance Index: -6.6300
  • Cell Name: cerebellar granule cell (CL0001031)
    Fold Change: -0.1295
    Cell Significance Index: -2.2200
  • Cell Name: intestinal tuft cell (CL0019032)
    Fold Change: -0.1416
    Cell Significance Index: -8.6800
  • Cell Name: granulosa cell (CL0000501)
    Fold Change: -0.1540
    Cell Significance Index: -4.0500
  • Cell Name: fibroblast of cardiac tissue (CL0002548)
    Fold Change: -0.1849
    Cell Significance Index: -2.6600
  • Cell Name: fibro/adipogenic progenitor cell (CL0009099)
    Fold Change: -0.1951
    Cell Significance Index: -9.8600
  • Cell Name: keratocyte (CL0002363)
    Fold Change: -0.2026
    Cell Significance Index: -3.2200
  • Cell Name: Purkinje cell (CL0000121)
    Fold Change: -0.2046
    Cell Significance Index: -4.4800
  • Cell Name: cortical interneuron (CL0008031)
    Fold Change: -0.2239
    Cell Significance Index: -5.3700
  • Cell Name: hippocampal pyramidal neuron (CL1001571)
    Fold Change: -0.2292
    Cell Significance Index: -6.5400
  • Cell Name: L6b glutamatergic cortical neuron (CL4023038)
    Fold Change: -0.2349
    Cell Significance Index: -7.6900
  • Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
    Fold Change: -0.2493
    Cell Significance Index: -7.9400
  • Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
    Fold Change: -0.2535
    Cell Significance Index: -8.8800
  • Cell Name: peg cell (CL4033014)
    Fold Change: -0.2593
    Cell Significance Index: -5.9900
  • Cell Name: medial ganglionic eminence derived interneuron (CL4023063)
    Fold Change: -0.2648
    Cell Significance Index: -3.7900
  • Cell Name: skeletal muscle myoblast (CL0000515)
    Fold Change: -0.2750
    Cell Significance Index: -2.9900
  • Cell Name: kidney epithelial cell (CL0002518)
    Fold Change: -0.2781
    Cell Significance Index: -8.1900

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Other Information

**Key Characteristics:** The SETMAR gene exhibits a distinctive fusion of the SET domain, a histone methyltransferase domain, and the mariner transposase domain. This fusion gene is characterized by its ability to interact with chromatin and DNA, influencing gene expression and genome integrity. The SET domain is known for its histone methyltransferase activity, which plays a crucial role in regulating gene expression and chromatin structure. The mariner transposase domain, on the other hand, is involved in DNA integration and repair. **Pathways and Functions:** The SETMAR gene is involved in various cellular pathways, including: 1. **Chromatin Remodeling:** The SET domain of SETMAR is a histone methyltransferase, which plays a crucial role in regulating chromatin structure and gene expression. 2. **DNA Repair:** The mariner transposase domain of SETMAR is involved in DNA integration and repair, ensuring genome stability and integrity. 3. **Transcriptional Regulation:** SETMAR interacts with transcription factors and chromatin-associated proteins to regulate gene expression and transcriptional initiation. 4. **Double-Strand Break Repair:** SETMAR is involved in the non-homologous end joining (NHEJ) pathway, which is responsible for repairing double-strand breaks in DNA. **Clinical Significance:** Dysregulation of the SETMAR gene has been implicated in various diseases, including: 1. **Cancer:** Aberrant expression of SETMAR has been observed in various cancers, including leukemia, lymphoma, and breast cancer. 2. **Neurodegenerative Diseases:** SETMAR has been implicated in the pathogenesis of neurodegenerative diseases, such as Alzheimer's disease and Parkinson's disease. 3. **Immunological Disorders:** SETMAR is expressed in immature innate lymphoid cells, and its dysregulation may contribute to immunological disorders, such as autoimmune diseases. In conclusion, the SETMAR gene is a complex fusion gene involved in chromatin regulation, DNA repair, and transcriptional regulation. Its dysregulation has been implicated in various diseases, highlighting the importance of this gene in maintaining genome stability and proper cellular development. Further research is needed to fully understand the mechanisms of SETMAR and its role in human disease.

Genular Protein ID: 1233793059

Symbol: SETMR_HUMAN

Name: N/A

UniProtKB Accession Codes:

Q53H47 B4DY74 E7EN68 Q13579 Q1G668 Q96F41

Database IDs:

ABCD 1 AGR 1 AlphaFoldDB 1 Antibodypedia 1 BRENDA 2 Bgee 1 BindingDB 1 BioCyc 1 BioGRID 1 BioGRID-ORCS 1 BioMuta 1 CCDS 3 CDD 1 CTD 1 ChEBI 28 ChEMBL 1 DMDM 1 DNASU 1 DisGeNET 1 EC 1 EMBL 8 Ensembl 3 EvolutionaryTrace 1 ExpressionAtlas 1 GO 26 Gene3D 4 GeneCards 1 GeneTree 1 GeneWiki 1 GenomeRNAi 1 HGNC 1 HOGENOM 1 HPA 1 InParanoid 1 IntAct 1 InterPro 9 KEGG 1 MANE-Select 1 MIM 1 MINT 1 MassIVE 1 NCBI Taxonomy 1 OMA 1 OpenTargets 1 OrthoDB 1 PANTHER 2 PDB 5 PDBsum 5 PRO 1 PROSITE 3 PathwayCommons 1 PaxDb 1 PeptideAtlas 1 Pfam 4 PharmGKB 1 Pharos 1 PhosphoSitePlus 1 PhylomeDB 1 Proteomes 1 ProteomicsDB 3 Pumba 1 RNAct 1 RefSeq 5 Rhea 3 SIGNOR 1 SMART 2 SMR 1 STRING 1 SUPFAM 1 SignaLink 1 TreeFam 1 UCSC 1 VEuPathDB 1 eggNOG 1 iPTMnet 1 jPOST 1 neXtProt 1

Citations:

PubMed ID: 14702039

Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.

PubMed ID: 14702039

DOI: 10.1038/ng1285

PubMed ID: 16641997

Title: The DNA sequence, annotation and analysis of human chromosome 3.

PubMed ID: 16641997

DOI: 10.1038/nature04728

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 16332963

Title: The SET domain protein Metnase mediates foreign DNA integration and links integration to nonhomologous end-joining repair.

PubMed ID: 16332963

DOI: 10.1073/pnas.0503676102

PubMed ID: 16672366

Title: Birth of a chimeric primate gene by capture of the transposase gene from a mobile element.

PubMed ID: 16672366

DOI: 10.1073/pnas.0601161103

PubMed ID: 9461395

Title: Molecular evolution of an ancient mariner transposon, Hsmar1, in the human genome.

PubMed ID: 9461395

DOI: 10.1016/s0378-1119(97)00472-1

PubMed ID: 17877369

Title: Biochemical characterization of a SET and transposase fusion protein, Metnase: its DNA binding and DNA cleavage activity.

PubMed ID: 17877369

DOI: 10.1021/bi7005477

PubMed ID: 17403897

Title: The ancient mariner sails again: transposition of the human Hsmar1 element by a reconstructed transposase and activities of the SETMAR protein on transposon ends.

PubMed ID: 17403897

DOI: 10.1128/mcb.02027-06

PubMed ID: 18263876

Title: Human Pso4 is a metnase (SETMAR)-binding partner that regulates metnase function in DNA repair.

PubMed ID: 18263876

DOI: 10.1074/jbc.m800150200

PubMed ID: 18790802

Title: The SET and transposase domain protein Metnase enhances chromosome decatenation: regulation by automethylation.

PubMed ID: 18790802

DOI: 10.1093/nar/gkn560

PubMed ID: 19690332

Title: Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions.

PubMed ID: 19690332

DOI: 10.1126/scisignal.2000007

PubMed ID: 19608861

Title: Lysine acetylation targets protein complexes and co-regulates major cellular functions.

PubMed ID: 19608861

DOI: 10.1126/science.1175371

PubMed ID: 20457750

Title: Metnase promotes restart and repair of stalled and collapsed replication forks.

PubMed ID: 20457750

DOI: 10.1093/nar/gkq339

PubMed ID: 20068231

Title: Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.

PubMed ID: 20068231

DOI: 10.1126/scisignal.2000475

PubMed ID: 21187428

Title: Methylation of histone H3 lysine 36 enhances DNA repair by nonhomologous end-joining.

PubMed ID: 21187428

DOI: 10.1073/pnas.1013571108

PubMed ID: 21406692

Title: System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation.

PubMed ID: 21406692

DOI: 10.1126/scisignal.2001570

PubMed ID: 22231448

Title: Chk1 phosphorylation of Metnase enhances DNA repair but inhibits replication fork restart.

PubMed ID: 22231448

DOI: 10.1038/onc.2011.586

PubMed ID: 23186163

Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.

PubMed ID: 23186163

DOI: 10.1021/pr300630k

PubMed ID: 24573677

Title: The DDN catalytic motif is required for Metnase functions in non-homologous end joining (NHEJ) repair and replication restart.

PubMed ID: 24573677

DOI: 10.1074/jbc.m113.533216

PubMed ID: 20521842

Title: Crystal structure of the human Hsmar1-derived transposase domain in the DNA repair enzyme Metnase.

PubMed ID: 20521842

DOI: 10.1021/bi100171x

Sequence Information:

  • Length: 684
  • Mass: 78034
  • Checksum: BB9460455C0BDBFA
  • Sequence:
    • MFAEAAKTTR PCGMAEFKEK PEAPTEQLDV ACGQENLPVG AWPPGAAPAP FQYTPDHVVG 
PGADIDPTQI TFPGCICVKT PCLPGTCSCL RHGENYDDNS CLRDIGSGGK YAEPVFECNV 
LCRCSDHCRN RVVQKGLQFH FQVFKTHKKG WGLRTLEFIP KGRFVCEYAG EVLGFSEVQR 
RIHLQTKSDS NYIIAIREHV YNGQVMETFV DPTYIGNIGR FLNHSCEPNL LMIPVRIDSM 
VPKLALFAAK DIVPEEELSY DYSGRYLNLT VSEDKERLDH GKLRKPCYCG AKSCTAFLPF 
DSSLYCPVEK SNISCGNEKE PSMCGSAPSV FPSCKRLTLE TMKMMLDKKQ IRAIFLFEFK 
MGRKAAETTR NINNAFGPGT ANERTVQWWF KKFCKGDESL EDEERSGRPS EVDNDQLRAI 
IEADPLTTTR EVAEELNVNH STVVRHLKQI GKVKKLDKWV PHELTENQKN RRFEVSSSLI 
LRNHNEPFLD RIVTCDEKWI LYDNRRRSAQ WLDQEEAPKH FPKPILHPKK VMVTIWWSAA 
GLIHYSFLNP GETITSEKYA QEIDEMNQKL QRLQLALVNR KGPILLHDNA RPHVAQPTLQ 
KLNELGYEVL PHPPYSPDLL PTNYHVFKHL NNFLQGKRFH NQQDAENAFQ EFVESQSTDF 
YATGINQLIS RWQKCVDCNG SYFD

Genular Protein ID: 3157347447

Symbol: B4DND2_HUMAN

Name: N/A

UniProtKB Accession Codes:

B4DND2

Database IDs:

AlphaFoldDB 1 BioGRID-ORCS 1 CTD 1 DNASU 1 DisGeNET 1 EMBL 2 GO 14 Gene3D 3 InterPro 5 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PeptideAtlas 1 Pfam 3 RefSeq 2 SMR 1

Sequence Information:

  • Length: 428
  • Mass: 49667
  • Checksum: 61D2D24D22E896C4
  • Sequence:
    • MQSLFLNAMS CADAVTTAET EWSRKVYSST SKCSRRIKKA GDFVPWNLYR KEEKSNISCG 
NEKEPSMCGS APSVFPSCKR LTLETMKMML DKKQIRAIFL FEFKMGRKAA ETTRNINNAF 
GPGTANERTV QWWFKKFCKG DESLEDEERS GRPSEVDNDQ LRAIIEADPL TTTREVAEEL 
NVNHSTVVRH LKQIGKVKKL DKWVPHELTE NQKNRRFEVS SSLILRNHNE PFLDRIVTCD 
EKWILYDNRR RSAQWLDQEE APKHFPKPIL HPKKVMVTIW WSAAGLIHYS FLNPGETITS 
EKYAQEIDEM NQKLQRLQLA LVNRKGPILL HDNARPHVAQ PTLQKLNELG YEVLPHPPYS 
PDLLPTNYHV FKHLNNFLQG KRFHNQQDAE NAFQEFVESQ STDFYATGIN QLISRWQKCV 
DCNGSYFD

Genular Protein ID: 3577219799

Symbol: Q96H41_HUMAN

Name: N/A

UniProtKB Accession Codes:

Q96H41

Database IDs:

AlphaFoldDB 1 BioGRID-ORCS 1 CTD 1 DNASU 1 DisGeNET 1 EMBL 2 GO 14 Gene3D 3 IntAct 1 InterPro 5 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PeptideAtlas 1 Pfam 3 RefSeq 1

Citations:

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

Sequence Information:

  • Length: 429
  • Mass: 49977
  • Checksum: 80295D2DA644F4F2
  • Sequence:
    • QRRHGLVGWR SLRRSLRPRL SSWMSRAARK TCRWARGPRG PRRRPSSSLY CPVEKSNISC 
GNEKEPSMCG SAPSVFPSCK RLTLETMKMM LDKKQIRAIF LFEFKMGRKA AETTRNINNA 
FGPGTANERT VQWWFKKFCK GDESLEDEER SGRPSEVDND QLRAIIEADP LTTTREVAEE 
LNVNHSTVVR HLKQIGKVKK LDKWVPHELT ENQKNRRFEV SSSLILRNHN EPFLDRIVTC 
DEKWILYDNR RRSAQWLDQE EAPKHFPKPI LHPKKVMVTI WWSAAGLIHY SFLNPGETIT 
SEKYAQEIDE MNQKLQRLQL ALVNRKGPIL LHDNARPHVA QPTLQKLNEL GYEVLPHPPY 
SPDLLPTNYH VFKHLNNFLQ GKRFHNQQDA ENAFQEFVES QSTDFYATGI NQLISRWQKC 
VDCNGSYFD

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.