Details for: SUPT6H
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: polychromatophilic erythroblast (CL0000550)
Fold Change: 235.8157
Cell Significance Index: -36.6800 - Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
Fold Change: 146.0318
Cell Significance Index: -37.0400 - Cell Name: mucosal type mast cell (CL0000485)
Fold Change: 83.5678
Cell Significance Index: -33.9500 - Cell Name: peripheral blood mononuclear cell (CL2000001)
Fold Change: 73.6899
Cell Significance Index: -37.9100 - Cell Name: ileal goblet cell (CL1000326)
Fold Change: 60.5047
Cell Significance Index: -40.6000 - Cell Name: ciliated cell of the bronchus (CL0002332)
Fold Change: 35.7269
Cell Significance Index: -34.1100 - Cell Name: orthochromatic erythroblast (CL0000552)
Fold Change: 31.6678
Cell Significance Index: -39.0500 - Cell Name: CD8-alpha-beta-positive, alpha-beta intraepithelial T cell (CL0000796)
Fold Change: 14.0918
Cell Significance Index: -37.7500 - Cell Name: CD8-positive, alpha-beta regulatory T cell (CL0000795)
Fold Change: 10.2492
Cell Significance Index: -31.4800 - Cell Name: stromal cell of bone marrow (CL0010001)
Fold Change: 10.0911
Cell Significance Index: -39.8200 - Cell Name: epidermal Langerhans cell (CL0002457)
Fold Change: 7.8795
Cell Significance Index: -17.2500 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: 3.0615
Cell Significance Index: 41.7700 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: 1.6053
Cell Significance Index: 43.0200 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: 1.4186
Cell Significance Index: 37.8800 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 1.3894
Cell Significance Index: 275.7400 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 1.2272
Cell Significance Index: 246.1800 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 0.9123
Cell Significance Index: 99.2400 - Cell Name: colon goblet cell (CL0009039)
Fold Change: 0.8858
Cell Significance Index: 87.6300 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: 0.8700
Cell Significance Index: 106.9700 - Cell Name: gut absorptive cell (CL0000677)
Fold Change: 0.8299
Cell Significance Index: 49.8200 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: 0.8126
Cell Significance Index: 146.4900 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: 0.7691
Cell Significance Index: 22.1600 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 0.7098
Cell Significance Index: 115.4400 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: 0.5975
Cell Significance Index: 31.0400 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 0.5684
Cell Significance Index: 203.8800 - Cell Name: umbrella cell of urothelium (CL4030056)
Fold Change: 0.5533
Cell Significance Index: 5.1000 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: 0.5471
Cell Significance Index: 24.8000 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: 0.5349
Cell Significance Index: 14.9500 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: 0.4853
Cell Significance Index: 37.2400 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: 0.4830
Cell Significance Index: 66.3300 - Cell Name: GABAergic interneuron (CL0011005)
Fold Change: 0.4472
Cell Significance Index: 309.2700 - Cell Name: microfold cell of epithelium of small intestine (CL1000353)
Fold Change: 0.4293
Cell Significance Index: 29.6900 - Cell Name: cell in vitro (CL0001034)
Fold Change: 0.3804
Cell Significance Index: 207.7400 - Cell Name: hair follicular keratinocyte (CL2000092)
Fold Change: 0.3573
Cell Significance Index: 157.9700 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: 0.3505
Cell Significance Index: 16.3400 - Cell Name: early pro-B cell (CL0002046)
Fold Change: 0.3161
Cell Significance Index: 20.4000 - Cell Name: paneth cell of epithelium of small intestine (CL1000343)
Fold Change: 0.3106
Cell Significance Index: 6.7300 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: 0.1721
Cell Significance Index: 8.0900 - Cell Name: tonsil germinal center B cell (CL2000006)
Fold Change: 0.1531
Cell Significance Index: 18.0500 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: 0.1428
Cell Significance Index: 9.6000 - Cell Name: basal cell of prostate epithelium (CL0002341)
Fold Change: 0.1396
Cell Significance Index: 3.8000 - Cell Name: enteroendocrine cell of small intestine (CL0009006)
Fold Change: 0.1222
Cell Significance Index: 3.0600 - Cell Name: sebum secreting cell (CL0000317)
Fold Change: 0.1203
Cell Significance Index: 8.5100 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: 0.1012
Cell Significance Index: 190.6000 - Cell Name: odontoblast (CL0000060)
Fold Change: 0.0842
Cell Significance Index: 10.8000 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: 0.0739
Cell Significance Index: 4.1500 - Cell Name: fibroblast of mammary gland (CL0002555)
Fold Change: 0.0726
Cell Significance Index: 2.0800 - Cell Name: neutrophil progenitor cell (CL0000834)
Fold Change: 0.0703
Cell Significance Index: 1.8800 - Cell Name: enteroendocrine cell of colon (CL0009042)
Fold Change: 0.0587
Cell Significance Index: 11.1800 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: 0.0498
Cell Significance Index: 76.7200 - Cell Name: anterior lens cell (CL0002223)
Fold Change: 0.0445
Cell Significance Index: 82.0700 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: 0.0414
Cell Significance Index: 1.4600 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: 0.0384
Cell Significance Index: 24.4100 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: 0.0324
Cell Significance Index: 1.9900 - Cell Name: skeletal muscle fiber (CL0008002)
Fold Change: 0.0253
Cell Significance Index: 0.6500 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: 0.0218
Cell Significance Index: 29.7000 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: 0.0097
Cell Significance Index: 4.4000 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: 0.0093
Cell Significance Index: 1.5800 - Cell Name: lung endothelial cell (CL1001567)
Fold Change: -0.0004
Cell Significance Index: -0.0200 - Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
Fold Change: -0.0170
Cell Significance Index: -12.4400 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: -0.0223
Cell Significance Index: -3.2500 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: -0.0256
Cell Significance Index: -19.3500 - Cell Name: lactocyte (CL0002325)
Fold Change: -0.0331
Cell Significance Index: -4.2700 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0375
Cell Significance Index: -27.7600 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: -0.0443
Cell Significance Index: -2.7900 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: -0.0522
Cell Significance Index: -2.3100 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0639
Cell Significance Index: -36.0600 - Cell Name: pancreatic PP cell (CL0002275)
Fold Change: -0.0715
Cell Significance Index: -44.6800 - Cell Name: CD4-positive, alpha-beta memory T cell, CD45RO-positive (CL0001204)
Fold Change: -0.0834
Cell Significance Index: -2.4500 - Cell Name: preadipocyte (CL0002334)
Fold Change: -0.0845
Cell Significance Index: -1.6500 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.0856
Cell Significance Index: -8.7400 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: -0.1095
Cell Significance Index: -8.1600 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.1175
Cell Significance Index: -33.8000 - Cell Name: direct pathway medium spiny neuron (CL4023026)
Fold Change: -0.1677
Cell Significance Index: -6.3500 - Cell Name: epithelial cell of stomach (CL0002178)
Fold Change: -0.1964
Cell Significance Index: -22.8900 - Cell Name: CD14-positive, CD16-negative classical monocyte (CL0002057)
Fold Change: -0.1967
Cell Significance Index: -3.6400 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.2006
Cell Significance Index: -42.2500 - Cell Name: cerebellar granule cell (CL0001031)
Fold Change: -0.2104
Cell Significance Index: -3.6100 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.2478
Cell Significance Index: -28.3900 - Cell Name: transit amplifying cell of small intestine (CL0009012)
Fold Change: -0.2907
Cell Significance Index: -6.0300 - Cell Name: transit amplifying cell of colon (CL0009011)
Fold Change: -0.3072
Cell Significance Index: -9.8400 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: -0.3103
Cell Significance Index: -32.3100 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: -0.3322
Cell Significance Index: -17.4400 - Cell Name: granulosa cell (CL0000501)
Fold Change: -0.3480
Cell Significance Index: -9.1500 - Cell Name: decidual cell (CL2000002)
Fold Change: -0.3618
Cell Significance Index: -5.8100 - Cell Name: fibro/adipogenic progenitor cell (CL0009099)
Fold Change: -0.4179
Cell Significance Index: -21.1200 - Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
Fold Change: -0.4182
Cell Significance Index: -33.1300 - Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
Fold Change: -0.4508
Cell Significance Index: -9.6000 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: -0.5554
Cell Significance Index: -34.0500 - Cell Name: hippocampal pyramidal neuron (CL1001571)
Fold Change: -0.5719
Cell Significance Index: -16.3200 - Cell Name: mesenchymal cell (CL0008019)
Fold Change: -0.5909
Cell Significance Index: -9.8900 - Cell Name: leptomeningeal cell (CL0000708)
Fold Change: -0.6180
Cell Significance Index: -13.2100 - Cell Name: endothelial cell of placenta (CL0009092)
Fold Change: -0.6736
Cell Significance Index: -4.0700 - Cell Name: foveolar cell of stomach (CL0002179)
Fold Change: -0.6864
Cell Significance Index: -4.4800 - Cell Name: centrilobular region hepatocyte (CL0019029)
Fold Change: -0.7017
Cell Significance Index: -11.8200 - Cell Name: periportal region hepatocyte (CL0019026)
Fold Change: -0.7043
Cell Significance Index: -10.4000 - Cell Name: cortical interneuron (CL0008031)
Fold Change: -0.7109
Cell Significance Index: -17.0500 - Cell Name: fibroblast of dermis (CL0002551)
Fold Change: -0.7185
Cell Significance Index: -15.0400 - Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
Fold Change: -0.7379
Cell Significance Index: -25.6400 - Cell Name: Purkinje cell (CL0000121)
Fold Change: -0.7661
Cell Significance Index: -16.7800
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 3193160468
Symbol: SPT6H_HUMAN
Name: Transcription elongation factor SPT6
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 8786132
Title: Identification and analysis of the human and murine putative chromatin structure regulator SUPT6H and Supt6h.
PubMed ID: 8786132
PubMed ID: 8724849
Title: Prediction of the coding sequences of unidentified human genes. V. The coding sequences of 40 new genes (KIAA0161-KIAA0200) deduced by analysis of cDNA clones from human cell line KG-1.
PubMed ID: 8724849
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 9514752
Title: Role of the human homolog of the yeast transcription factor SPT5 in HIV-1 Tat-activation.
PubMed ID: 9514752
PubMed ID: 10933715
Title: Functional interaction between pleiotropic transactivator pUL69 of human cytomegalovirus and the human homolog of yeast chromatin regulatory protein SPT6.
PubMed ID: 10933715
PubMed ID: 15060154
Title: Human Spt6 stimulates transcription elongation by RNA polymerase II in vitro.
PubMed ID: 15060154
PubMed ID: 17081983
Title: Global, in vivo, and site-specific phosphorylation dynamics in signaling networks.
PubMed ID: 17081983
PubMed ID: 17234882
Title: The Spt6 SH2 domain binds Ser2-P RNAPII to direct Iws1-dependent mRNA splicing and export.
PubMed ID: 17234882
DOI: 10.1101/gad.1503107
PubMed ID: 19141475
Title: The Iws1:Spt6:CTD complex controls cotranscriptional mRNA biosynthesis and HYPB/Setd2-mediated histone H3K36 methylation.
PubMed ID: 19141475
DOI: 10.1101/gad.1720008
PubMed ID: 18220336
Title: Combining protein-based IMAC, peptide-based IMAC, and MudPIT for efficient phosphoproteomic analysis.
PubMed ID: 18220336
DOI: 10.1021/pr0705441
PubMed ID: 18669648
Title: A quantitative atlas of mitotic phosphorylation.
PubMed ID: 18669648
PubMed ID: 19413330
Title: Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach.
PubMed ID: 19413330
DOI: 10.1021/ac9004309
PubMed ID: 19690332
Title: Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions.
PubMed ID: 19690332
PubMed ID: 19608861
Title: Lysine acetylation targets protein complexes and co-regulates major cellular functions.
PubMed ID: 19608861
PubMed ID: 20068231
Title: Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.
PubMed ID: 20068231
PubMed ID: 21269460
Title: Initial characterization of the human central proteome.
PubMed ID: 21269460
PubMed ID: 22567361
Title: Histone chaperones Spt6 and FACT: Similarities and differences in modes of action at transcribed genes.
PubMed ID: 22567361
DOI: 10.4061/2011/625210
PubMed ID: 21518874
Title: Histone chaperone Spt6 is required for class switch recombination but not somatic hypermutation.
PubMed ID: 21518874
PubMed ID: 21406692
Title: System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation.
PubMed ID: 21406692
PubMed ID: 22171252
Title: The cellular protein SPT6 is required for efficient replication of human cytomegalovirus.
PubMed ID: 22171252
DOI: 10.1128/jvi.06776-11
PubMed ID: 22316138
Title: Spt6 levels are modulated by PAAF1 and proteasome to regulate the HIV-1 LTR.
PubMed ID: 22316138
PubMed ID: 23503590
Title: The histone chaperone Spt6 coordinates histone H3K27 demethylation and myogenesis.
PubMed ID: 23503590
PubMed ID: 23186163
Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.
PubMed ID: 23186163
DOI: 10.1021/pr300630k
PubMed ID: 24275569
Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.
PubMed ID: 24275569
Sequence Information:
- Length: 1726
- Mass: 199073
- Checksum: F7EB22FA669EB030
- Sequence:
MSDFVESEAE ESEEEYNDEG EVVPRVTKKF VEEEDDDEEE EEENLDDQDE QGNLKGFIND DDDEDEGEED EGSDSGDSED DVGHKKRKRT SFDDRLEDDD FDLIEENLGV KVKRGQKYRR VKKMSDDEDD DEEEYGKEEH EKEAIAEEIF QDGEGEEGQE AMEAPMAPPE EEEEDDEESD IDDFIVDDDG QPLKKPKWRK KLPGYTDAAL QEAQEIFGVD FDYDEFEKYN EYDEELEEEY EYEDDEAEGE IRVRPKKTTK KRVSRRSIFE MYEPSELESS HLTDQDNEIR ATDLPERFQL RSIPVKGAED DELEEEADWI YRNAFATPTI SLQESCDYLD RGQPASSFSR KGPSTIQKIK EALGFMRNQH FEVPFIAFYR KEYVEPELHI NDLWRVWQWD EKWTQLRIRK ENLTRLFEKM QAYQYEQISA DPDKPLADGI RALDTTDMER LKDVQSMDEL KDVYNHFLLY YGRDIPKMQN AAKASRKKLK RVREEGDEEG EGDEAEDEEQ RGPELKQASR RDMYTICQSA GLDGLAKKFG LTPEQFGENL RDSYQRHETE QFPAEPLELA KDYVCSQFPT PEAVLEGARY MVALQIAREP LVRQVLRQTF QERAKLNITP TKKGRKDVDE AHYAYSFKYL KNKPVKELRD DQFLKICLAE DEGLLTTDIS IDLKGVEGYG NDQTYFEEIK QFYYRDEFSH QVQEWNRQRT MAIERALQQF LYVQMAKELK NKLLAEAKEY VIKACSRKLY NWLRVAPYRP DQQVEEDDDF MDENQGKGIR VLGIAFSSAR DHPVFCALVN GEGEVTDFLR LPHFTKRRTA WREEEREKKA QDIETLKKFL LNKKPHVVTV AGENRDAQML IEDVKRIVHE LDQGQQLSSI GVELVDNELA ILYMNSKKSE AEFRDYPPVL RQAVSLARRI QDPLIEFAQV CSSDEDILCL KFHPLQEHVV KEELLNALYC EFINRVNEVG VDVNRAIAHP YSQALIQYVC GLGPRKGTHL LKILKQNNTR LESRTQLVTM CHMGPKVFMN CAGFLKIDTA SLGDSTDSYI EVLDGSRVHP ETYEWARKMA VDALEYDESA EDANPAGALE EILENPERLK DLDLDAFAEE LERQGYGDKH ITLYDIRAEL SCRYKDLRTA YRSPNTEEIF NMLTKETPET FYIGKLIICN VTGIAHRRPQ GESYDQAIRN DETGLWQCPF CQQDNFPELS EVWNHFDSGS CPGQAIGVKT RLDNGVTGFI PTKFLSDKVV KRPEERVKVG MTVHCRIMKI DIEKFSADLT CRTSDLMDRN NEWKLPKDTY YDFDAEAADH KQEEDMKRKQ QRTTYIKRVI AHPSFHNINF KQAEKMMETM DQGDVIIRPS SKGENHLTVT WKVSDGIYQH VDVREEGKEN AFSLGATLWI NSEEFEDLDE IVARYVQPMA SFARDLLNHK YYQDCSGGDR KKLEELLIKT KKEKPTFIPY FICACKELPG KFLLGYQPRG KPRIEYVTVT PEGFRYRGQI FPTVNGLFRW FKDHYQDPVP GITPSSSSRT RTPASINATP ANINLADLTR AVNALPQNMT SQMFSAIAAV TGQGQNPNAT PAQWASSQYG YGGSGGGSSA YHVFPTPAQQ PVATPLMTPS YSYTTPSQPI TTPQYHQLQA STTPQSAQAQ PQPSSSSRQR QQQPKSNSHA AIDWGKMAEQ WLQEKEAERR KQKQRLTPRP SPSPMIESTP MSIAGDATPL LDEMDR
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.