Details for: UBE2D1

Gene ID: 7321

Symbol: UBE2D1

Ensembl ID: ENSG00000072401

Description: ubiquitin conjugating enzyme E2 D1

Associated with

Cells (max top 100)

(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)

  • Cell Name: polychromatophilic erythroblast (CL0000550)
    Fold Change: 276.3826
    Cell Significance Index: -42.9900
  • Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
    Fold Change: 162.0385
    Cell Significance Index: -41.1000
  • Cell Name: embryonic stem cell (CL0002322)
    Fold Change: 97.2697
    Cell Significance Index: -40.0700
  • Cell Name: smooth muscle fiber of ileum (CL1000278)
    Fold Change: 93.0902
    Cell Significance Index: -43.9500
  • Cell Name: mucosal type mast cell (CL0000485)
    Fold Change: 89.7707
    Cell Significance Index: -36.4700
  • Cell Name: peripheral blood mononuclear cell (CL2000001)
    Fold Change: 79.8623
    Cell Significance Index: -41.0800
  • Cell Name: ciliated cell of the bronchus (CL0002332)
    Fold Change: 38.3245
    Cell Significance Index: -36.5900
  • Cell Name: orthochromatic erythroblast (CL0000552)
    Fold Change: 35.2648
    Cell Significance Index: -43.4800
  • Cell Name: CD8-alpha-beta-positive, alpha-beta intraepithelial T cell (CL0000796)
    Fold Change: 13.2706
    Cell Significance Index: -35.5500
  • Cell Name: stromal cell of bone marrow (CL0010001)
    Fold Change: 11.0769
    Cell Significance Index: -43.7100
  • Cell Name: CD8-positive, alpha-beta regulatory T cell (CL0000795)
    Fold Change: 8.6506
    Cell Significance Index: -26.5700
  • Cell Name: epidermal Langerhans cell (CL0002457)
    Fold Change: 4.9849
    Cell Significance Index: -10.9100
  • Cell Name: CD14-positive, CD16-negative classical monocyte (CL0002057)
    Fold Change: 2.8052
    Cell Significance Index: 51.8500
  • Cell Name: skeletal muscle fiber (CL0008002)
    Fold Change: 2.2218
    Cell Significance Index: 57.1100
  • Cell Name: type I muscle cell (CL0002211)
    Fold Change: 2.2074
    Cell Significance Index: 53.8600
  • Cell Name: fibroblast of mammary gland (CL0002555)
    Fold Change: 1.5870
    Cell Significance Index: 45.4900
  • Cell Name: epithelial cell of stomach (CL0002178)
    Fold Change: 1.3388
    Cell Significance Index: 156.0200
  • Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
    Fold Change: 1.0650
    Cell Significance Index: 79.3700
  • Cell Name: granulosa cell (CL0000501)
    Fold Change: 0.9477
    Cell Significance Index: 24.9200
  • Cell Name: type II muscle cell (CL0002212)
    Fold Change: 0.8540
    Cell Significance Index: 13.7800
  • Cell Name: colon goblet cell (CL0009039)
    Fold Change: 0.8398
    Cell Significance Index: 83.0800
  • Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
    Fold Change: 0.7384
    Cell Significance Index: 34.7100
  • Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
    Fold Change: 0.7382
    Cell Significance Index: 148.0900
  • Cell Name: cardiac muscle myoblast (CL0000513)
    Fold Change: 0.7195
    Cell Significance Index: 55.2200
  • Cell Name: stromal cell of ovary (CL0002132)
    Fold Change: 0.6428
    Cell Significance Index: 88.2700
  • Cell Name: basal cell of urothelium (CL1000486)
    Fold Change: 0.6036
    Cell Significance Index: 74.2200
  • Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
    Fold Change: 0.5923
    Cell Significance Index: 212.4700
  • Cell Name: intermediate cell of urothelium (CL4030055)
    Fold Change: 0.5794
    Cell Significance Index: 104.4500
  • Cell Name: microcirculation associated smooth muscle cell (CL0008035)
    Fold Change: 0.5762
    Cell Significance Index: 4.8400
  • Cell Name: cell in vitro (CL0001034)
    Fold Change: 0.5578
    Cell Significance Index: 304.6400
  • Cell Name: microfold cell of epithelium of small intestine (CL1000353)
    Fold Change: 0.5197
    Cell Significance Index: 35.9400
  • Cell Name: placental villous trophoblast (CL2000060)
    Fold Change: 0.4977
    Cell Significance Index: 13.2900
  • Cell Name: GABAergic interneuron (CL0011005)
    Fold Change: 0.4181
    Cell Significance Index: 289.1900
  • Cell Name: basal cell of prostate epithelium (CL0002341)
    Fold Change: 0.4133
    Cell Significance Index: 11.2500
  • Cell Name: bladder urothelial cell (CL1001428)
    Fold Change: 0.3977
    Cell Significance Index: 20.6600
  • Cell Name: hair follicular keratinocyte (CL2000092)
    Fold Change: 0.3201
    Cell Significance Index: 141.5300
  • Cell Name: enteroendocrine cell of colon (CL0009042)
    Fold Change: 0.3153
    Cell Significance Index: 60.0000
  • Cell Name: paneth cell of epithelium of small intestine (CL1000343)
    Fold Change: 0.3046
    Cell Significance Index: 6.6000
  • Cell Name: fibroblast of dermis (CL0002551)
    Fold Change: 0.2680
    Cell Significance Index: 5.6100
  • Cell Name: lactocyte (CL0002325)
    Fold Change: 0.2470
    Cell Significance Index: 31.9100
  • Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
    Fold Change: 0.2397
    Cell Significance Index: 8.3300
  • Cell Name: neoplastic cell (CL0001063)
    Fold Change: 0.2134
    Cell Significance Index: 42.3500
  • Cell Name: enterocyte of epithelium of small intestine (CL1000334)
    Fold Change: 0.1940
    Cell Significance Index: 5.5900
  • Cell Name: lung endothelial cell (CL1001567)
    Fold Change: 0.1891
    Cell Significance Index: 9.8500
  • Cell Name: glycinergic neuron (CL1001509)
    Fold Change: 0.1634
    Cell Significance Index: 8.5800
  • Cell Name: sebum secreting cell (CL0000317)
    Fold Change: 0.1575
    Cell Significance Index: 11.1400
  • Cell Name: odontoblast (CL0000060)
    Fold Change: 0.1022
    Cell Significance Index: 13.1000
  • Cell Name: tonsil germinal center B cell (CL2000006)
    Fold Change: 0.0744
    Cell Significance Index: 8.7700
  • Cell Name: forebrain neuroblast (CL1000042)
    Fold Change: 0.0651
    Cell Significance Index: 4.0000
  • Cell Name: small intestine goblet cell (CL1000495)
    Fold Change: 0.0598
    Cell Significance Index: 2.1000
  • Cell Name: retinal progenitor cell (CL0002672)
    Fold Change: -0.0004
    Cell Significance Index: -0.0200
  • Cell Name: enterocyte of epithelium of large intestine (CL0002071)
    Fold Change: -0.0024
    Cell Significance Index: -0.1100
  • Cell Name: pigmented epithelial cell (CL0000529)
    Fold Change: -0.0111
    Cell Significance Index: -20.9700
  • Cell Name: hippocampal granule cell (CL0001033)
    Fold Change: -0.0214
    Cell Significance Index: -1.4400
  • Cell Name: anterior lens cell (CL0002223)
    Fold Change: -0.0218
    Cell Significance Index: -40.2000
  • Cell Name: lens epithelial cell (CL0002224)
    Fold Change: -0.0252
    Cell Significance Index: -38.8400
  • Cell Name: secondary lens fiber (CL0002225)
    Fold Change: -0.0326
    Cell Significance Index: -44.3000
  • Cell Name: ciliary muscle cell (CL1000443)
    Fold Change: -0.0339
    Cell Significance Index: -15.3700
  • Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
    Fold Change: -0.0354
    Cell Significance Index: -22.4600
  • Cell Name: tuft cell of colon (CL0009041)
    Fold Change: -0.0355
    Cell Significance Index: -32.0600
  • Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
    Fold Change: -0.0389
    Cell Significance Index: -28.5500
  • Cell Name: pulmonary alveolar epithelial cell (CL0000322)
    Fold Change: -0.0391
    Cell Significance Index: -29.5600
  • Cell Name: pancreatic A cell (CL0000171)
    Fold Change: -0.0405
    Cell Significance Index: -30.0100
  • Cell Name: abnormal cell (CL0001061)
    Fold Change: -0.0417
    Cell Significance Index: -4.2600
  • Cell Name: mesenchymal cell (CL0008019)
    Fold Change: -0.0580
    Cell Significance Index: -0.9700
  • Cell Name: acinar cell of salivary gland (CL0002623)
    Fold Change: -0.0586
    Cell Significance Index: -2.7300
  • Cell Name: type B pancreatic cell (CL0000169)
    Fold Change: -0.0670
    Cell Significance Index: -37.7600
  • Cell Name: pancreatic PP cell (CL0002275)
    Fold Change: -0.0791
    Cell Significance Index: -49.4100
  • Cell Name: pancreatic acinar cell (CL0002064)
    Fold Change: -0.1025
    Cell Significance Index: -17.5000
  • Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
    Fold Change: -0.1164
    Cell Significance Index: -2.4800
  • Cell Name: dopaminergic neuron (CL0000700)
    Fold Change: -0.1282
    Cell Significance Index: -36.9000
  • Cell Name: umbrella cell of urothelium (CL4030056)
    Fold Change: -0.1314
    Cell Significance Index: -1.2100
  • Cell Name: eye photoreceptor cell (CL0000287)
    Fold Change: -0.1395
    Cell Significance Index: -8.7900
  • Cell Name: pigmented ciliary epithelial cell (CL0002303)
    Fold Change: -0.1918
    Cell Significance Index: -27.8800
  • Cell Name: vascular lymphangioblast (CL0005022)
    Fold Change: -0.2165
    Cell Significance Index: -3.8300
  • Cell Name: pancreatic D cell (CL0000173)
    Fold Change: -0.2197
    Cell Significance Index: -46.2800
  • Cell Name: Purkinje cell (CL0000121)
    Fold Change: -0.2261
    Cell Significance Index: -4.9500
  • Cell Name: pancreatic ductal cell (CL0002079)
    Fold Change: -0.2340
    Cell Significance Index: -26.8100
  • Cell Name: indirect pathway medium spiny neuron (CL4023029)
    Fold Change: -0.2403
    Cell Significance Index: -10.6300
  • Cell Name: paneth cell of colon (CL0009009)
    Fold Change: -0.2876
    Cell Significance Index: -4.3100
  • Cell Name: early pro-B cell (CL0002046)
    Fold Change: -0.2913
    Cell Significance Index: -18.7900
  • Cell Name: direct pathway medium spiny neuron (CL4023026)
    Fold Change: -0.2960
    Cell Significance Index: -11.2100
  • Cell Name: cardiac muscle cell (CL0000746)
    Fold Change: -0.3238
    Cell Significance Index: -4.7800
  • Cell Name: CD4-positive, alpha-beta memory T cell, CD45RO-positive (CL0001204)
    Fold Change: -0.3555
    Cell Significance Index: -10.4400
  • Cell Name: conjunctival epithelial cell (CL1000432)
    Fold Change: -0.3613
    Cell Significance Index: -4.9300
  • Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
    Fold Change: -0.3689
    Cell Significance Index: -10.3100
  • Cell Name: luminal hormone-sensing cell of mammary gland (CL4033058)
    Fold Change: -0.3835
    Cell Significance Index: -2.3600
  • Cell Name: thyroid follicular cell (CL0002258)
    Fold Change: -0.3925
    Cell Significance Index: -4.1700
  • Cell Name: transit amplifying cell of colon (CL0009011)
    Fold Change: -0.4025
    Cell Significance Index: -12.8900
  • Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
    Fold Change: -0.4120
    Cell Significance Index: -42.9000
  • Cell Name: endothelial cell of venule (CL1000414)
    Fold Change: -0.4172
    Cell Significance Index: -4.7400
  • Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
    Fold Change: -0.4614
    Cell Significance Index: -36.5400
  • Cell Name: retinal rod cell (CL0000604)
    Fold Change: -0.4746
    Cell Significance Index: -5.6600
  • Cell Name: neutrophil progenitor cell (CL0000834)
    Fold Change: -0.5069
    Cell Significance Index: -13.5600
  • Cell Name: enteroendocrine cell of small intestine (CL0009006)
    Fold Change: -0.5381
    Cell Significance Index: -13.4500
  • Cell Name: kidney epithelial cell (CL0002518)
    Fold Change: -0.5870
    Cell Significance Index: -17.2900
  • Cell Name: cerebellar granule cell (CL0001031)
    Fold Change: -0.6022
    Cell Significance Index: -10.3200
  • Cell Name: intestinal tuft cell (CL0019032)
    Fold Change: -0.7010
    Cell Significance Index: -42.9800
  • Cell Name: pro-T cell (CL0000827)
    Fold Change: -0.8369
    Cell Significance Index: -21.3800
  • Cell Name: neuroblast (sensu Vertebrata) (CL0000031)
    Fold Change: -0.8546
    Cell Significance Index: -5.5600

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Other Information

**Key Characteristics** 1. **Ubiquitin-conjugating enzyme E2 D1**: UBE2D1 is a member of the ubiquitin-conjugating enzyme family, which plays a central role in the ubiquitination process. 2. **Mitotic cell cycle regulation**: UBE2D1 is involved in the regulation of the mitotic cell cycle, particularly in the activation of the anaphase-promoting complex (APC) and the degradation of mitotic proteins. 3. **Antigen processing**: UBE2D1 is involved in the ubiquitination and proteasomal degradation of proteins involved in antigen processing, which is essential for immune system function. 4. **Adaptive immune system**: UBE2D1 is expressed in various immune cells, including T cells, B cells, and dendritic cells, and plays a role in the regulation of immune responses. **Pathways and Functions** 1. **Mitotic cell cycle regulation**: UBE2D1 is involved in the regulation of the mitotic cell cycle, particularly in the activation of the APC and the degradation of mitotic proteins. 2. **Antigen processing**: UBE2D1 is involved in the ubiquitination and proteasomal degradation of proteins involved in antigen processing, which is essential for immune system function. 3. **Adaptive immune system**: UBE2D1 is expressed in various immune cells, including T cells, B cells, and dendritic cells, and plays a role in the regulation of immune responses. 4. **Protein turnover**: UBE2D1 is involved in the ubiquitination and proteasomal degradation of proteins, which is essential for protein turnover and cellular homeostasis. 5. **Cellular responses to stimuli**: UBE2D1 is involved in the regulation of cellular responses to various stimuli, including stress, hypoxia, and cytokines. **Clinical Significance** 1. **Cancer**: Aberrant expression or dysfunction of UBE2D1 has been implicated in various cancers, including breast cancer, lung cancer, and leukemia. 2. **Autoimmune disorders**: UBE2D1 has been implicated in the pathogenesis of autoimmune disorders, including rheumatoid arthritis, lupus, and multiple sclerosis. 3. **Metabolic disorders**: UBE2D1 has been implicated in the regulation of glucose metabolism and insulin sensitivity, and has been associated with metabolic disorders, including type 2 diabetes. 4. **Immunodeficiency**: UBE2D1 has been implicated in the regulation of immune responses, and its dysfunction has been associated with immunodeficiency disorders. In conclusion, UBE2D1 is a critical gene involved in various cellular processes, including the regulation of the mitotic cell cycle, antigen processing, and immune system function. Its aberrant expression or dysfunction has been implicated in various diseases, including cancer, autoimmune disorders, and metabolic disorders. Further research is needed to fully understand the role of UBE2D1 in human disease and to develop therapeutic strategies to target this gene.

Genular Protein ID: 3118678838

Symbol: UB2D1_HUMAN

Name: Ubiquitin-conjugating enzyme E2 D1

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 8090726

Title: Identification of a human ubiquitin-conjugating enzyme that mediates the E6-AP-dependent ubiquitination of p53.

PubMed ID: 8090726

DOI: 10.1073/pnas.91.19.8797

PubMed ID: 12480712

Title: UbcH5A, a member of human E2 ubiquitin-conjugating enzymes, is closely related to SFT, a stimulator of iron transport, and is up-regulated in hereditary hemochromatosis.

PubMed ID: 12480712

DOI: 10.1182/blood-2002-07-2192

PubMed ID: 14702039

Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.

PubMed ID: 14702039

DOI: 10.1038/ng1285

PubMed ID: 15164054

Title: The DNA sequence and comparative analysis of human chromosome 10.

PubMed ID: 15164054

DOI: 10.1038/nature02462

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 9362508

Title: Functional expression cloning and characterization of SFT, a stimulator of Fe transport.

PubMed ID: 9362508

DOI: 10.1083/jcb.139.4.895

PubMed ID: 11389839

Title: Siah-1, SIP, and Ebi collaborate in a novel pathway for beta-catenin degradation linked to p53 responses.

PubMed ID: 11389839

DOI: 10.1016/s1097-2765(01)00242-8

PubMed ID: 14562029

Title: The RING-H2 protein RNF11 is overexpressed in breast cancer and is a target of Smurf2 E3 ligase.

PubMed ID: 14562029

DOI: 10.1038/sj.bjc.6601301

PubMed ID: 17588522

Title: E3-independent monoubiquitination of ubiquitin-binding proteins.

PubMed ID: 17588522

DOI: 10.1016/j.molcel.2007.05.014

PubMed ID: 18042044

Title: Two different classes of E2 ubiquitin-conjugating enzymes are required for the mono-ubiquitination of proteins and elongation by polyubiquitin chains with a specific topology.

PubMed ID: 18042044

DOI: 10.1042/bj20071338

PubMed ID: 18845142

Title: The autoantigen Ro52 is an E3 ligase resident in the cytoplasm but enters the nucleus upon cellular exposure to nitric oxide.

PubMed ID: 18845142

DOI: 10.1016/j.yexcr.2008.09.011

PubMed ID: 18359941

Title: Members of the E2D (UbcH5) family mediate the ubiquitination of the conserved cysteine of Pex5p, the peroxisomal import receptor.

PubMed ID: 18359941

DOI: 10.1074/jbc.m800402200

PubMed ID: 19103148

Title: CYP3A4 ubiquitination by gp78 (the tumor autocrine motility factor receptor, AMFR) and CHIP E3 ligases.

PubMed ID: 19103148

DOI: 10.1016/j.abb.2008.12.001

PubMed ID: 19854139

Title: Key role of Ubc5 and lysine-63 polyubiquitination in viral activation of IRF3.

PubMed ID: 19854139

DOI: 10.1016/j.molcel.2009.09.037

PubMed ID: 20061386

Title: The E2 ubiquitin-conjugating enzymes direct polyubiquitination to preferred lysines.

PubMed ID: 20061386

DOI: 10.1074/jbc.m109.089003

PubMed ID: 22496338

Title: A human ubiquitin conjugating enzyme (E2)-HECT E3 ligase structure-function screen.

PubMed ID: 22496338

DOI: 10.1074/mcp.o111.013706

PubMed ID: 21685362

Title: The IDOL-UBE2D complex mediates sterol-dependent degradation of the LDL receptor.

PubMed ID: 21685362

DOI: 10.1101/gad.2056211

Sequence Information:

  • Length: 147
  • Mass: 16602
  • Checksum: 2E96FD0179EE119D
  • Sequence:
  • MALKRIQKEL SDLQRDPPAH CSAGPVGDDL FHWQATIMGP PDSAYQGGVF FLTVHFPTDY 
    PFKPPKIAFT TKIYHPNINS NGSICLDILR SQWSPALTVS KVLLSICSLL CDPNPDDPLV 
    PDIAQIYKSD KEKYNRHARE WTQKYAM

Genular Protein ID: 820497434

Symbol: A0A087WW00_HUMAN

Name: N/A

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 11237011

Title: Initial sequencing and analysis of the human genome.

PubMed ID: 11237011

DOI: 10.1038/35057062

PubMed ID: 15164054

Title: The DNA sequence and comparative analysis of human chromosome 10.

PubMed ID: 15164054

DOI: 10.1038/nature02462

PubMed ID: 15496913

Title: Finishing the euchromatic sequence of the human genome.

PubMed ID: 15496913

DOI: 10.1038/nature03001

Sequence Information:

  • Length: 109
  • Mass: 12421
  • Checksum: 7EC6C2D62B579D92
  • Sequence:
  • MTPDSAYQGG VFFLTVHFPT DYPFKPPKIA FTTKIYHPNI NSNGSICLDI LRSQWSPALT 
    VSKVLLSICS LLCDPNPDDP LVPDIAQIYK SDKEKYNRHA REWTQKYAM

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.