Details for: SYMPK
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: polychromatophilic erythroblast (CL0000550)
Fold Change: 221.2861
Cell Significance Index: -34.4200 - Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
Fold Change: 129.0394
Cell Significance Index: -32.7300 - Cell Name: smooth muscle fiber of ileum (CL1000278)
Fold Change: 77.4375
Cell Significance Index: -36.5600 - Cell Name: mucosal type mast cell (CL0000485)
Fold Change: 75.9371
Cell Significance Index: -30.8500 - Cell Name: peripheral blood mononuclear cell (CL2000001)
Fold Change: 67.6925
Cell Significance Index: -34.8200 - Cell Name: ciliated cell of the bronchus (CL0002332)
Fold Change: 32.3857
Cell Significance Index: -30.9200 - Cell Name: orthochromatic erythroblast (CL0000552)
Fold Change: 29.3036
Cell Significance Index: -36.1300 - Cell Name: CD8-alpha-beta-positive, alpha-beta intraepithelial T cell (CL0000796)
Fold Change: 12.7442
Cell Significance Index: -34.1400 - Cell Name: stromal cell of bone marrow (CL0010001)
Fold Change: 9.2751
Cell Significance Index: -36.6000 - Cell Name: epidermal Langerhans cell (CL0002457)
Fold Change: 7.6990
Cell Significance Index: -16.8500 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 1.3124
Cell Significance Index: 263.2600 - Cell Name: epithelial cell of stomach (CL0002178)
Fold Change: 1.2082
Cell Significance Index: 140.8000 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 1.1705
Cell Significance Index: 232.2900 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 1.0418
Cell Significance Index: 940.6600 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 0.9948
Cell Significance Index: 108.2000 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: 0.9661
Cell Significance Index: 27.8400 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: 0.9550
Cell Significance Index: 26.6900 - Cell Name: gut absorptive cell (CL0000677)
Fold Change: 0.8500
Cell Significance Index: 51.0300 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 0.8265
Cell Significance Index: 296.4600 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: 0.7775
Cell Significance Index: 20.7600 - Cell Name: colon goblet cell (CL0009039)
Fold Change: 0.6176
Cell Significance Index: 61.0900 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: 0.5807
Cell Significance Index: 26.3200 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: 0.5754
Cell Significance Index: 44.1600 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: 0.4915
Cell Significance Index: 67.4900 - Cell Name: microfold cell of epithelium of small intestine (CL1000353)
Fold Change: 0.4815
Cell Significance Index: 33.3000 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: 0.3611
Cell Significance Index: 18.7600 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: 0.3527
Cell Significance Index: 63.5800 - Cell Name: tonsil germinal center B cell (CL2000006)
Fold Change: 0.3206
Cell Significance Index: 37.8100 - Cell Name: cell in vitro (CL0001034)
Fold Change: 0.3161
Cell Significance Index: 172.6200 - Cell Name: odontoblast (CL0000060)
Fold Change: 0.2849
Cell Significance Index: 36.5200 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: 0.2683
Cell Significance Index: 32.9900 - Cell Name: GABAergic interneuron (CL0011005)
Fold Change: 0.2633
Cell Significance Index: 182.1200 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: 0.2249
Cell Significance Index: 12.6200 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: 0.1834
Cell Significance Index: 11.2700 - Cell Name: early pro-B cell (CL0002046)
Fold Change: 0.1814
Cell Significance Index: 11.7000 - Cell Name: hair follicular keratinocyte (CL2000092)
Fold Change: 0.1799
Cell Significance Index: 79.5300 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: 0.1521
Cell Significance Index: 7.0900 - Cell Name: basal cell of prostate epithelium (CL0002341)
Fold Change: 0.1299
Cell Significance Index: 3.5400 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: 0.1247
Cell Significance Index: 5.5200 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 0.1225
Cell Significance Index: 19.9300 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: 0.1163
Cell Significance Index: 218.9600 - Cell Name: enteroendocrine cell of colon (CL0009042)
Fold Change: 0.0869
Cell Significance Index: 16.5400 - Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
Fold Change: 0.0768
Cell Significance Index: 1.6400 - Cell Name: anterior lens cell (CL0002223)
Fold Change: 0.0732
Cell Significance Index: 134.9900 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: 0.0728
Cell Significance Index: 112.0800 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: 0.0559
Cell Significance Index: 25.3600 - Cell Name: direct pathway medium spiny neuron (CL4023026)
Fold Change: 0.0555
Cell Significance Index: 2.1000 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: 0.0494
Cell Significance Index: 31.3800 - Cell Name: skeletal muscle fiber (CL0008002)
Fold Change: 0.0354
Cell Significance Index: 0.9100 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: 0.0342
Cell Significance Index: 2.3000 - Cell Name: lung endothelial cell (CL1001567)
Fold Change: 0.0275
Cell Significance Index: 1.4300 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: 0.0251
Cell Significance Index: 34.1700 - Cell Name: lactocyte (CL0002325)
Fold Change: 0.0006
Cell Significance Index: 0.0800 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: -0.0147
Cell Significance Index: -2.1300 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: -0.0170
Cell Significance Index: -0.8000 - Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
Fold Change: -0.0178
Cell Significance Index: -13.0300 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: -0.0255
Cell Significance Index: -19.3100 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: -0.0307
Cell Significance Index: -2.2900 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0375
Cell Significance Index: -27.7800 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: -0.0406
Cell Significance Index: -6.9400 - Cell Name: neutrophil progenitor cell (CL0000834)
Fold Change: -0.0564
Cell Significance Index: -1.5100 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: -0.0581
Cell Significance Index: -3.0500 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0591
Cell Significance Index: -33.3200 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.0637
Cell Significance Index: -6.5100 - Cell Name: pancreatic PP cell (CL0002275)
Fold Change: -0.0655
Cell Significance Index: -40.8900 - Cell Name: mesenchymal cell (CL0008019)
Fold Change: -0.0831
Cell Significance Index: -1.3900 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.1075
Cell Significance Index: -30.9400 - Cell Name: transit amplifying cell of small intestine (CL0009012)
Fold Change: -0.1181
Cell Significance Index: -2.4500 - Cell Name: cerebellar granule cell (CL0001031)
Fold Change: -0.1182
Cell Significance Index: -2.0300 - Cell Name: sebum secreting cell (CL0000317)
Fold Change: -0.1487
Cell Significance Index: -10.5200 - Cell Name: granulosa cell (CL0000501)
Fold Change: -0.1624
Cell Significance Index: -4.2700 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.1794
Cell Significance Index: -37.7900 - Cell Name: transit amplifying cell of colon (CL0009011)
Fold Change: -0.2204
Cell Significance Index: -7.0600 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: -0.2245
Cell Significance Index: -14.1500 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.2382
Cell Significance Index: -27.2900 - Cell Name: cardiac muscle cell (CL0000746)
Fold Change: -0.2581
Cell Significance Index: -3.8100 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: -0.2607
Cell Significance Index: -27.1400 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: -0.2855
Cell Significance Index: -7.6500 - Cell Name: preadipocyte (CL0002334)
Fold Change: -0.3074
Cell Significance Index: -6.0000 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: -0.3635
Cell Significance Index: -4.9600 - Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
Fold Change: -0.3686
Cell Significance Index: -12.8100 - Cell Name: cortical interneuron (CL0008031)
Fold Change: -0.3715
Cell Significance Index: -8.9100 - Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
Fold Change: -0.3841
Cell Significance Index: -30.4200 - Cell Name: paneth cell of epithelium of small intestine (CL1000343)
Fold Change: -0.4330
Cell Significance Index: -9.3800 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: -0.4388
Cell Significance Index: -26.9000 - Cell Name: hippocampal pyramidal neuron (CL1001571)
Fold Change: -0.4408
Cell Significance Index: -12.5800 - Cell Name: fibroblast of mammary gland (CL0002555)
Fold Change: -0.4444
Cell Significance Index: -12.7400 - Cell Name: fibroblast of dermis (CL0002551)
Fold Change: -0.4897
Cell Significance Index: -10.2500 - Cell Name: pro-T cell (CL0000827)
Fold Change: -0.5312
Cell Significance Index: -13.5700 - Cell Name: Purkinje cell (CL0000121)
Fold Change: -0.5366
Cell Significance Index: -11.7500 - Cell Name: endothelial cell of placenta (CL0009092)
Fold Change: -0.5603
Cell Significance Index: -3.3900 - Cell Name: GABAergic amacrine cell (CL4030027)
Fold Change: -0.5672
Cell Significance Index: -7.0400 - Cell Name: BEST4+ enteroycte (CL4030026)
Fold Change: -0.5939
Cell Significance Index: -8.9500 - Cell Name: CD4-positive, alpha-beta memory T cell, CD45RO-positive (CL0001204)
Fold Change: -0.6090
Cell Significance Index: -17.8900 - Cell Name: enteroendocrine cell of small intestine (CL0009006)
Fold Change: -0.6097
Cell Significance Index: -15.2400 - Cell Name: foveolar cell of stomach (CL0002179)
Fold Change: -0.6204
Cell Significance Index: -4.0500 - Cell Name: CD14-positive, CD16-negative classical monocyte (CL0002057)
Fold Change: -0.6325
Cell Significance Index: -11.6900 - Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
Fold Change: -0.6422
Cell Significance Index: -13.6300 - Cell Name: kidney epithelial cell (CL0002518)
Fold Change: -0.6678
Cell Significance Index: -19.6700 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: -0.6820
Cell Significance Index: -21.7200
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 1344685189
Symbol: SYMPK_HUMAN
Name: Symplekin
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 9585442
Title: Six transcripts map within 200 kilobases of the myotonic dystrophy expanded repeat.
PubMed ID: 9585442
PubMed ID: 9330635
Title: Chromosomal localization to 19q13.3, partial genomic structure and 5' cDNA sequence of the human symplekin gene.
PubMed ID: 9330635
DOI: 10.1007/bf02721375
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 8769423
Title: Symplekin, a novel type of tight junction plaque protein.
PubMed ID: 8769423
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 10669729
Title: Complex protein interactions within the human polyadenylation machinery identify a novel component.
PubMed ID: 10669729
PubMed ID: 12006661
Title: Symplekin, a constitutive protein of karyo- and cytoplasmic particles involved in mRNA biogenesis in Xenopus laevis oocytes.
PubMed ID: 12006661
PubMed ID: 14707147
Title: HSF1 modulation of Hsp70 mRNA polyadenylation via interaction with symplekin.
PubMed ID: 14707147
PubMed ID: 16230528
Title: Symplekin and multiple other polyadenylation factors participate in 3'-end maturation of histone mRNAs.
PubMed ID: 16230528
DOI: 10.1101/gad.1371105
PubMed ID: 18688255
Title: Conserved motifs in both CPSF73 and CPSF100 are required to assemble the active endonuclease for histone mRNA 3'-end maturation.
PubMed ID: 18688255
PubMed ID: 18669648
Title: A quantitative atlas of mitotic phosphorylation.
PubMed ID: 18669648
PubMed ID: 19690332
Title: Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions.
PubMed ID: 19690332
PubMed ID: 20068231
Title: Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.
PubMed ID: 20068231
PubMed ID: 21269460
Title: Initial characterization of the human central proteome.
PubMed ID: 21269460
PubMed ID: 23186163
Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.
PubMed ID: 23186163
DOI: 10.1021/pr300630k
PubMed ID: 24275569
Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.
PubMed ID: 24275569
PubMed ID: 25218447
Title: Uncovering global SUMOylation signaling networks in a site-specific manner.
PubMed ID: 25218447
DOI: 10.1038/nsmb.2890
PubMed ID: 25114211
Title: Mapping of SUMO sites and analysis of SUMOylation changes induced by external stimuli.
PubMed ID: 25114211
PubMed ID: 25755297
Title: System-wide analysis of SUMOylation dynamics in response to replication stress reveals novel small ubiquitin-like modified target proteins and acceptor lysines relevant for genome stability.
PubMed ID: 25755297
PubMed ID: 28112733
Title: Site-specific mapping of the human SUMO proteome reveals co-modification with phosphorylation.
PubMed ID: 28112733
DOI: 10.1038/nsmb.3366
PubMed ID: 20861839
Title: Crystal structure of the human symplekin-Ssu72-CTD phosphopeptide complex.
PubMed ID: 20861839
DOI: 10.1038/nature09391
PubMed ID: 23070812
Title: An unexpected binding mode for a Pol II CTD peptide phosphorylated at Ser7 in the active site of the CTD phosphatase Ssu72.
PubMed ID: 23070812
Sequence Information:
- Length: 1274
- Mass: 141148
- Checksum: D8AD9ABB0B25A688
- Sequence:
MASGSGDSVT RRSVASQFFT QEEGPGIDGM TTSERVVDLL NQAALITNDS KITVLKQVQE LIINKDPTLL DNFLDEIIAF QADKSIEVRK FVIGFIEEAC KRDIELLLKL IANLNMLLRD ENVNVVKKAI LTMTQLYKVA LQWMVKSRVI SELQEACWDM VSAMAGDIIL LLDSDNDGIR THAIKFVEGL IVTLSPRMAD SEIPRRQEHD ISLDRIPRDH PYIQYNVLWE EGKAALEQLL KFMVHPAISS INLTTALGSL ANIARQRPMF MSEVIQAYET LHANLPPTLA KSQVSSVRKN LKLHLLSVLK HPASLEFQAQ ITTLLVDLGT PQAEIARNMP SSKDTRKRPR DDSDSTLKKM KLEPNLGEDD EDKDLEPGPS GTSKASAQIS GQSDTDITAE FLQPLLTPDN VANLVLISMV YLPEAMPASF QAIYTPVESA GTEAQIKHLA RLMATQMTAA GLGPGVEQTK QCKEEPKEEK VVKTESVLIK RRLSAQGQAI SVVGSLSSMS PLEEEAPQAK RRPEPIIPVT QPRLAGAGGR KKIFRLSDVL KPLTDAQVEA MKLGAVKRIL RAEKAVACSG AAQVRIKILA SLVTQFNSGL KAEVLSFILE DVRARLDLAF AWLYQEYNAY LAAGASGSLD KYEDCLIRLL SGLQEKPDQK DGIFTKVVLE APLITESALE VVRKYCEDES RTYLGMSTLR DLIFKRPSRQ FQYLHVLLDL SSHEKDKVRS QALLFIKRMY EKEQLREYVE KFALNYLQLL VHPNPPSVLF GADKDTEVAA PWTEETVKQC LYLYLALLPQ NHKLIHELAA VYTEAIADIK RTVLRVIEQP IRGMGMNSPE LLLLVENCPK GAETLVTRCL HSLTDKVPPS PELVKRVRDL YHKRLPDVRF LIPVLNGLEK KEVIQALPKL IKLNPIVVKE VFNRLLGTQH GEGNSALSPL NPGELLIALH NIDSVKCDMK SIIKATNLCF AERNVYTSEV LAVVMQQLME QSPLPMLLMR TVIQSLTMYP RLGGFVMNIL SRLIMKQVWK YPKVWEGFIK CCQRTKPQSF QVILQLPPQQ LGAVFDKCPE LREPLLAHVR SFTPHQQAHI PNSIMTILEA SGKQEPEAKE APAGPLEEDD LEPLTLAPAP APRPPQDLIG LRLAQEKALK RQLEEEQKLK PGGVGAPSSS SPSPSPSARP GPPPSEEAMD FREEGPECET PGIFISMDDD SGLTEAALLD SSLEGPLPKE TAAGGLTLKE ERSPQTLAPV GEDAMKTPSP AAEDAREPEA KGNS
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.