Details for: RIOK3
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: polychromatophilic erythroblast (CL0000550)
Fold Change: 295.4768
Cell Significance Index: -45.9600 - Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
Fold Change: 198.5071
Cell Significance Index: -50.3500 - Cell Name: embryonic stem cell (CL0002322)
Fold Change: 143.2949
Cell Significance Index: -59.0300 - Cell Name: smooth muscle fiber of ileum (CL1000278)
Fold Change: 120.5619
Cell Significance Index: -56.9200 - Cell Name: mucosal type mast cell (CL0000485)
Fold Change: 117.4502
Cell Significance Index: -47.7200 - Cell Name: peripheral blood mononuclear cell (CL2000001)
Fold Change: 106.0878
Cell Significance Index: -54.5700 - Cell Name: ileal goblet cell (CL1000326)
Fold Change: 85.0792
Cell Significance Index: -57.0900 - Cell Name: ciliated cell of the bronchus (CL0002332)
Fold Change: 50.5634
Cell Significance Index: -48.2800 - Cell Name: orthochromatic erythroblast (CL0000552)
Fold Change: 34.7701
Cell Significance Index: -42.8700 - Cell Name: CD8-alpha-beta-positive, alpha-beta intraepithelial T cell (CL0000796)
Fold Change: 20.2362
Cell Significance Index: -54.2100 - Cell Name: stromal cell of bone marrow (CL0010001)
Fold Change: 13.6086
Cell Significance Index: -53.7000 - Cell Name: CD8-positive, alpha-beta regulatory T cell (CL0000795)
Fold Change: 13.1078
Cell Significance Index: -40.2600 - Cell Name: epidermal Langerhans cell (CL0002457)
Fold Change: 10.5593
Cell Significance Index: -23.1100 - Cell Name: epithelial cell of pancreas (CL0000083)
Fold Change: 7.3908
Cell Significance Index: 121.7900 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: 2.9799
Cell Significance Index: 135.0700 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: 1.9173
Cell Significance Index: 99.6000 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: 1.6613
Cell Significance Index: 44.3600 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: 1.3766
Cell Significance Index: 38.4700 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 1.2922
Cell Significance Index: 259.2100 - Cell Name: basal cell of prostate epithelium (CL0002341)
Fold Change: 1.2267
Cell Significance Index: 33.3900 - Cell Name: colon goblet cell (CL0009039)
Fold Change: 1.0654
Cell Significance Index: 105.3900 - Cell Name: CD14-positive, CD16-negative classical monocyte (CL0002057)
Fold Change: 1.0161
Cell Significance Index: 18.7800 - Cell Name: early pro-B cell (CL0002046)
Fold Change: 1.0125
Cell Significance Index: 65.3200 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: 1.0086
Cell Significance Index: 124.0200 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: 0.9435
Cell Significance Index: 27.1900 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: 0.9227
Cell Significance Index: 166.3300 - Cell Name: cell in vitro (CL0001034)
Fold Change: 0.8978
Cell Significance Index: 490.3100 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 0.8709
Cell Significance Index: 172.8300 - Cell Name: basal cell of epidermis (CL0002187)
Fold Change: 0.8079
Cell Significance Index: 12.2700 - Cell Name: lung endothelial cell (CL1001567)
Fold Change: 0.8030
Cell Significance Index: 41.8300 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: 0.7832
Cell Significance Index: 36.5200 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: 0.7639
Cell Significance Index: 104.9100 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: 0.7432
Cell Significance Index: 57.0400 - Cell Name: extravillous trophoblast (CL0008036)
Fold Change: 0.6373
Cell Significance Index: 3.9600 - Cell Name: hair follicular keratinocyte (CL2000092)
Fold Change: 0.6317
Cell Significance Index: 279.2700 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: 0.5748
Cell Significance Index: 27.0200 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 0.5408
Cell Significance Index: 193.9900 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 0.5106
Cell Significance Index: 461.0500 - Cell Name: umbrella cell of urothelium (CL4030056)
Fold Change: 0.4968
Cell Significance Index: 4.5800 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 0.4966
Cell Significance Index: 80.7700 - Cell Name: tonsil germinal center B cell (CL2000006)
Fold Change: 0.4517
Cell Significance Index: 53.2700 - Cell Name: preadipocyte (CL0002334)
Fold Change: 0.4437
Cell Significance Index: 8.6600 - Cell Name: fibroblast of mammary gland (CL0002555)
Fold Change: 0.4221
Cell Significance Index: 12.1000 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 0.4046
Cell Significance Index: 44.0100 - Cell Name: pancreatic endocrine cell (CL0008024)
Fold Change: 0.3758
Cell Significance Index: 42.9000 - Cell Name: paneth cell of colon (CL0009009)
Fold Change: 0.3350
Cell Significance Index: 5.0200 - Cell Name: corneal epithelial cell (CL0000575)
Fold Change: 0.3309
Cell Significance Index: 4.7100 - Cell Name: centrilobular region hepatocyte (CL0019029)
Fold Change: 0.2882
Cell Significance Index: 4.8500 - Cell Name: anterior lens cell (CL0002223)
Fold Change: 0.2852
Cell Significance Index: 525.9400 - Cell Name: GABAergic interneuron (CL0011005)
Fold Change: 0.2585
Cell Significance Index: 178.8100 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: 0.2402
Cell Significance Index: 369.7200 - Cell Name: enteroendocrine cell of colon (CL0009042)
Fold Change: 0.2344
Cell Significance Index: 44.6000 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: 0.1705
Cell Significance Index: 19.5400 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: 0.1596
Cell Significance Index: 300.5500 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: 0.1461
Cell Significance Index: 24.9500 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: 0.0882
Cell Significance Index: 5.4200 - Cell Name: sebum secreting cell (CL0000317)
Fold Change: 0.0622
Cell Significance Index: 4.4000 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: 0.0525
Cell Significance Index: 33.3300 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: 0.0519
Cell Significance Index: 70.5100 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: 0.0456
Cell Significance Index: 20.7000 - Cell Name: odontoblast (CL0000060)
Fold Change: 0.0311
Cell Significance Index: 3.9900 - Cell Name: lactocyte (CL0002325)
Fold Change: 0.0278
Cell Significance Index: 3.6000 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: 0.0102
Cell Significance Index: 0.6400 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: -0.0083
Cell Significance Index: -0.2900 - Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
Fold Change: -0.0221
Cell Significance Index: -16.2000 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0257
Cell Significance Index: -19.0300 - Cell Name: endothelial cell of placenta (CL0009092)
Fold Change: -0.0265
Cell Significance Index: -0.1600 - Cell Name: pancreatic PP cell (CL0002275)
Fold Change: -0.0410
Cell Significance Index: -25.6300 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: -0.0427
Cell Significance Index: -3.1800 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: -0.0428
Cell Significance Index: -32.4100 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0548
Cell Significance Index: -30.9200 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.0890
Cell Significance Index: -9.1000 - Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
Fold Change: -0.0930
Cell Significance Index: -1.9800 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.1445
Cell Significance Index: -30.4400 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.1588
Cell Significance Index: -45.6800 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: -0.1605
Cell Significance Index: -2.1900 - Cell Name: epidermal cell (CL0000362)
Fold Change: -0.1641
Cell Significance Index: -0.3700 - Cell Name: microfold cell of epithelium of small intestine (CL1000353)
Fold Change: -0.1721
Cell Significance Index: -11.9100 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: -0.1807
Cell Significance Index: -26.2700 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: -0.1853
Cell Significance Index: -10.4000 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: -0.1961
Cell Significance Index: -5.2600 - Cell Name: skeletal muscle fiber (CL0008002)
Fold Change: -0.2572
Cell Significance Index: -6.6100 - Cell Name: epithelial cell of stomach (CL0002178)
Fold Change: -0.2633
Cell Significance Index: -30.6800 - Cell Name: paneth cell of epithelium of small intestine (CL1000343)
Fold Change: -0.3226
Cell Significance Index: -6.9900 - Cell Name: granulosa cell (CL0000501)
Fold Change: -0.3628
Cell Significance Index: -9.5400 - Cell Name: fibro/adipogenic progenitor cell (CL0009099)
Fold Change: -0.4065
Cell Significance Index: -20.5400 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: -0.4159
Cell Significance Index: -43.3100 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: -0.4161
Cell Significance Index: -27.9800 - Cell Name: enteroendocrine cell of small intestine (CL0009006)
Fold Change: -0.4208
Cell Significance Index: -10.5200 - Cell Name: neutrophil progenitor cell (CL0000834)
Fold Change: -0.4591
Cell Significance Index: -12.2800 - Cell Name: cerebellar granule cell (CL0001031)
Fold Change: -0.5100
Cell Significance Index: -8.7400 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: -0.5200
Cell Significance Index: -27.3000 - Cell Name: periportal region hepatocyte (CL0019026)
Fold Change: -0.5298
Cell Significance Index: -7.8200 - Cell Name: cardiac muscle cell (CL0000746)
Fold Change: -0.5453
Cell Significance Index: -8.0500 - Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
Fold Change: -0.5461
Cell Significance Index: -43.2500 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: -0.6050
Cell Significance Index: -26.7600 - Cell Name: CD4-positive, alpha-beta memory T cell, CD45RO-positive (CL0001204)
Fold Change: -0.6364
Cell Significance Index: -18.6900 - Cell Name: direct pathway medium spiny neuron (CL4023026)
Fold Change: -0.7759
Cell Significance Index: -29.3800 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: -0.7938
Cell Significance Index: -48.6700 - Cell Name: peg cell (CL4033014)
Fold Change: -0.8120
Cell Significance Index: -18.7600
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 2865794690
Symbol: RIOK3_HUMAN
Name: Serine/threonine-protein kinase RIO3
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 9602165
Title: Isolation of the Aspergillus nidulans sudD gene and its human homologue.
PubMed ID: 9602165
PubMed ID: 16177791
Title: DNA sequence and analysis of human chromosome 18.
PubMed ID: 16177791
DOI: 10.1038/nature03983
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 18669648
Title: A quantitative atlas of mitotic phosphorylation.
PubMed ID: 18669648
PubMed ID: 19557502
Title: RIOK3 interacts with caspase-10 and negatively regulates the NF-kappaB signaling pathway.
PubMed ID: 19557502
PubMed ID: 21269460
Title: Initial characterization of the human central proteome.
PubMed ID: 21269460
PubMed ID: 22072790
Title: The kinase activity of human Rio1 is required for final steps of cytoplasmic maturation of 40S subunits.
PubMed ID: 22072790
PubMed ID: 22418843
Title: Human RioK3 is a novel component of cytoplasmic pre-40S pre-ribosomal particles.
PubMed ID: 22418843
DOI: 10.4161/rna.18810
PubMed ID: 23186163
Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.
PubMed ID: 23186163
DOI: 10.1021/pr300630k
PubMed ID: 24807708
Title: RIOK3 is an adaptor protein required for IRF3-mediated antiviral type I interferon production.
PubMed ID: 24807708
DOI: 10.1128/jvi.00643-14
PubMed ID: 25865883
Title: RIOK3-mediated phosphorylation of MDA5 interferes with its assembly and attenuates the innate immune response.
PubMed ID: 25865883
PubMed ID: 17344846
Title: Patterns of somatic mutation in human cancer genomes.
PubMed ID: 17344846
DOI: 10.1038/nature05610
Sequence Information:
- Length: 519
- Mass: 59093
- Checksum: 3C3392BAC4ECB912
- Sequence:
MDLVGVASPE PGTAAAWGPS KCPWAIPQNT ISCSLADVMS EQLAKELQLE EEAAVFPEVA VAEGPFITGE NIDTSSDLML AQMLQMEYDR EYDAQLRREE KKFNGDSKVS ISFENYRKVH PYEDSDSSED EVDWQDTRDD PYRPAKPVPT PKKGFIGKGK DITTKHDEVV CGRKNTARME NFAPEFQVGD GIGMDLKLSN HVFNALKQHA YSEERRSARL HEKKEHSTAE KAVDPKTRLL MYKMVNSGML ETITGCISTG KESVVFHAYG GSMEDEKEDS KVIPTECAIK VFKTTLNEFK NRDKYIKDDF RFKDRFSKLN PRKIIRMWAE KEMHNLARMQ RAGIPCPTVV LLKKHILVMS FIGHDQVPAP KLKEVKLNSE EMKEAYYQTL HLMRQLYHEC TLVHADLSEY NMLWHAGKVW LIDVSQSVEP THPHGLEFLF RDCRNVSQFF QKGGVKEALS ERELFNAVSG LNITADNEAD FLAEIEALEK MNEDHVQKNG RKAASFLKDD GDPPLLYDE
Genular Protein ID: 2822344091
Symbol: B4E1Q4_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 11237011
Title: Initial sequencing and analysis of the human genome.
PubMed ID: 11237011
DOI: 10.1038/35057062
PubMed ID: 15496913
Title: Finishing the euchromatic sequence of the human genome.
PubMed ID: 15496913
DOI: 10.1038/nature03001
PubMed ID: 16177791
Title: DNA sequence and analysis of human chromosome 18.
PubMed ID: 16177791
DOI: 10.1038/nature03983
PubMed ID: 18669648
Title: A quantitative atlas of mitotic phosphorylation.
PubMed ID: 18669648
PubMed ID: 21269460
Title: Initial characterization of the human central proteome.
PubMed ID: 21269460
PubMed ID: 23186163
Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.
PubMed ID: 23186163
Sequence Information:
- Length: 503
- Mass: 57474
- Checksum: 2BA1496AE8A3A64E
- Sequence:
MDLVGVASPE PGTAAAWGPS KCPWAIPQNT ISCSLADVMS EQLAKELQLE EEAAVFPEVA DLMLAQMLQM EYDREYDAQL RREEKKFNGD SKVSISFENY RKVHPYEDSD SSEDEVDWQD TRDDPYRPAK PVPTPKKGFI GKGKDITTKH DEVVCGRKNT ARMENFAPEF QVGDGIGMDL KLSNHVFNAL KQHAYSEERR SARLHEKKEH STAEKAVDPK TRLLMYKMVN SGMLETITGC ISTGKESVVF HAYGGSMEDE KEDSKVIPTE CAIKVFKTTL NEFKNRDKYI KDDFRFKDRF SKLNPRKIIR MWAEKEMHNL ARMQRAGIPC PTVVLLKKHI LVMSFIGHDQ VPAPKLKEVK LNSEEMKEAY YQTLHLMRQL YHECTLVHAD LSEYNMLWHA GKVWLIDVSQ SVEPTHPHGL EFLFRDCRNV SQFFQKGGVK EALSERELFN AVSGLNITAD NEADFLAEIE ALEKMNEDHV QKNGRKAASF LKDDGDPPLL YDE
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.