Details for: NT5C3A

Gene ID: 51251

Symbol: NT5C3A

Ensembl ID: ENSG00000122643

Description: 5'-nucleotidase, cytosolic IIIA

Associated with

Cells (max top 100)

(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)

  • Cell Name: polychromatophilic erythroblast (CL0000550)
    Fold Change: 241.9875
    Cell Significance Index: -37.6400
  • Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
    Fold Change: 143.5283
    Cell Significance Index: -36.4100
  • Cell Name: smooth muscle fiber of ileum (CL1000278)
    Fold Change: 101.1178
    Cell Significance Index: -47.7400
  • Cell Name: mucosal type mast cell (CL0000485)
    Fold Change: 100.1829
    Cell Significance Index: -40.7000
  • Cell Name: peripheral blood mononuclear cell (CL2000001)
    Fold Change: 89.7576
    Cell Significance Index: -46.1700
  • Cell Name: ileal goblet cell (CL1000326)
    Fold Change: 71.3389
    Cell Significance Index: -47.8700
  • Cell Name: ciliated cell of the bronchus (CL0002332)
    Fold Change: 42.8911
    Cell Significance Index: -40.9500
  • Cell Name: orthochromatic erythroblast (CL0000552)
    Fold Change: 30.8851
    Cell Significance Index: -38.0800
  • Cell Name: CD8-alpha-beta-positive, alpha-beta intraepithelial T cell (CL0000796)
    Fold Change: 15.7716
    Cell Significance Index: -42.2500
  • Cell Name: stromal cell of bone marrow (CL0010001)
    Fold Change: 11.5685
    Cell Significance Index: -45.6500
  • Cell Name: CD8-positive, alpha-beta regulatory T cell (CL0000795)
    Fold Change: 9.8976
    Cell Significance Index: -30.4000
  • Cell Name: epidermal Langerhans cell (CL0002457)
    Fold Change: 8.3433
    Cell Significance Index: -18.2600
  • Cell Name: microfold cell of epithelium of small intestine (CL1000353)
    Fold Change: 4.0651
    Cell Significance Index: 281.1200
  • Cell Name: intestinal crypt stem cell of colon (CL0009043)
    Fold Change: 2.0430
    Cell Significance Index: 222.2200
  • Cell Name: colon goblet cell (CL0009039)
    Fold Change: 1.5524
    Cell Significance Index: 153.5700
  • Cell Name: paneth cell of colon (CL0009009)
    Fold Change: 1.4896
    Cell Significance Index: 22.3200
  • Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
    Fold Change: 1.2596
    Cell Significance Index: 252.6800
  • Cell Name: intermediate cell of urothelium (CL4030055)
    Fold Change: 1.1346
    Cell Significance Index: 204.5400
  • Cell Name: neoplastic cell (CL0001063)
    Fold Change: 1.0864
    Cell Significance Index: 215.5900
  • Cell Name: retinal progenitor cell (CL0002672)
    Fold Change: 1.0619
    Cell Significance Index: 59.5900
  • Cell Name: enterocyte of epithelium of large intestine (CL0002071)
    Fold Change: 1.0411
    Cell Significance Index: 47.1900
  • Cell Name: paneth cell of epithelium of small intestine (CL1000343)
    Fold Change: 0.9425
    Cell Significance Index: 20.4200
  • Cell Name: basal cell of urothelium (CL1000486)
    Fold Change: 0.8444
    Cell Significance Index: 103.8300
  • Cell Name: enterocyte of epithelium of small intestine (CL1000334)
    Fold Change: 0.8326
    Cell Significance Index: 23.9900
  • Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
    Fold Change: 0.8291
    Cell Significance Index: 23.1700
  • Cell Name: bladder urothelial cell (CL1001428)
    Fold Change: 0.7367
    Cell Significance Index: 38.2700
  • Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
    Fold Change: 0.7094
    Cell Significance Index: 254.4400
  • Cell Name: forebrain neuroblast (CL1000042)
    Fold Change: 0.6981
    Cell Significance Index: 42.9100
  • Cell Name: GABAergic interneuron (CL0011005)
    Fold Change: 0.6156
    Cell Significance Index: 425.7900
  • Cell Name: conjunctival epithelial cell (CL1000432)
    Fold Change: 0.4852
    Cell Significance Index: 6.6200
  • Cell Name: cardiac muscle myoblast (CL0000513)
    Fold Change: 0.4524
    Cell Significance Index: 34.7200
  • Cell Name: tonsil germinal center B cell (CL2000006)
    Fold Change: 0.4086
    Cell Significance Index: 48.1900
  • Cell Name: preadipocyte (CL0002334)
    Fold Change: 0.4068
    Cell Significance Index: 7.9400
  • Cell Name: cell in vitro (CL0001034)
    Fold Change: 0.3937
    Cell Significance Index: 215.0000
  • Cell Name: hair follicular keratinocyte (CL2000092)
    Fold Change: 0.3674
    Cell Significance Index: 162.4300
  • Cell Name: enteroendocrine cell of colon (CL0009042)
    Fold Change: 0.3138
    Cell Significance Index: 59.7200
  • Cell Name: stromal cell of ovary (CL0002132)
    Fold Change: 0.2990
    Cell Significance Index: 41.0600
  • Cell Name: small intestine goblet cell (CL1000495)
    Fold Change: 0.2376
    Cell Significance Index: 8.3500
  • Cell Name: odontoblast (CL0000060)
    Fold Change: 0.2016
    Cell Significance Index: 25.8500
  • Cell Name: granulosa cell (CL0000501)
    Fold Change: 0.1810
    Cell Significance Index: 4.7600
  • Cell Name: eye photoreceptor cell (CL0000287)
    Fold Change: 0.1798
    Cell Significance Index: 11.3300
  • Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
    Fold Change: 0.1760
    Cell Significance Index: 8.2700
  • Cell Name: pancreatic acinar cell (CL0002064)
    Fold Change: 0.1738
    Cell Significance Index: 29.6900
  • Cell Name: sebum secreting cell (CL0000317)
    Fold Change: 0.1676
    Cell Significance Index: 11.8500
  • Cell Name: glycinergic neuron (CL1001509)
    Fold Change: 0.1385
    Cell Significance Index: 7.2700
  • Cell Name: basal cell of prostate epithelium (CL0002341)
    Fold Change: 0.0941
    Cell Significance Index: 2.5600
  • Cell Name: retinal rod cell (CL0000604)
    Fold Change: 0.0805
    Cell Significance Index: 0.9600
  • Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
    Fold Change: 0.0630
    Cell Significance Index: 2.1900
  • Cell Name: CD4-positive, alpha-beta memory T cell, CD45RO-positive (CL0001204)
    Fold Change: 0.0609
    Cell Significance Index: 1.7900
  • Cell Name: lactocyte (CL0002325)
    Fold Change: 0.0495
    Cell Significance Index: 6.4000
  • Cell Name: pigmented epithelial cell (CL0000529)
    Fold Change: 0.0346
    Cell Significance Index: 65.2000
  • Cell Name: cerebellar granule cell (CL0001031)
    Fold Change: 0.0280
    Cell Significance Index: 0.4800
  • Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
    Fold Change: 0.0094
    Cell Significance Index: 0.2000
  • Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
    Fold Change: 0.0089
    Cell Significance Index: 5.6400
  • Cell Name: lens epithelial cell (CL0002224)
    Fold Change: 0.0084
    Cell Significance Index: 12.9700
  • Cell Name: anterior lens cell (CL0002223)
    Fold Change: 0.0032
    Cell Significance Index: 5.9000
  • Cell Name: placental villous trophoblast (CL2000060)
    Fold Change: 0.0011
    Cell Significance Index: 0.0300
  • Cell Name: ciliary muscle cell (CL1000443)
    Fold Change: -0.0128
    Cell Significance Index: -5.8000
  • Cell Name: secondary lens fiber (CL0002225)
    Fold Change: -0.0249
    Cell Significance Index: -33.7900
  • Cell Name: early pro-B cell (CL0002046)
    Fold Change: -0.0341
    Cell Significance Index: -2.2000
  • Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
    Fold Change: -0.0391
    Cell Significance Index: -28.6900
  • Cell Name: pancreatic A cell (CL0000171)
    Fold Change: -0.0399
    Cell Significance Index: -29.5600
  • Cell Name: pulmonary alveolar epithelial cell (CL0000322)
    Fold Change: -0.0433
    Cell Significance Index: -32.7800
  • Cell Name: type B pancreatic cell (CL0000169)
    Fold Change: -0.0740
    Cell Significance Index: -41.7600
  • Cell Name: abnormal cell (CL0001061)
    Fold Change: -0.0750
    Cell Significance Index: -7.6600
  • Cell Name: cortical interneuron (CL0008031)
    Fold Change: -0.0780
    Cell Significance Index: -1.8700
  • Cell Name: pancreatic PP cell (CL0002275)
    Fold Change: -0.0854
    Cell Significance Index: -53.3500
  • Cell Name: hippocampal granule cell (CL0001033)
    Fold Change: -0.0925
    Cell Significance Index: -6.2200
  • Cell Name: skeletal muscle fiber (CL0008002)
    Fold Change: -0.1082
    Cell Significance Index: -2.7800
  • Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
    Fold Change: -0.1102
    Cell Significance Index: -8.2100
  • Cell Name: indirect pathway medium spiny neuron (CL4023029)
    Fold Change: -0.1112
    Cell Significance Index: -4.9200
  • Cell Name: dopaminergic neuron (CL0000700)
    Fold Change: -0.1366
    Cell Significance Index: -39.2900
  • Cell Name: direct pathway medium spiny neuron (CL4023026)
    Fold Change: -0.1610
    Cell Significance Index: -6.1000
  • Cell Name: pigmented ciliary epithelial cell (CL0002303)
    Fold Change: -0.1657
    Cell Significance Index: -24.0800
  • Cell Name: fibroblast of mammary gland (CL0002555)
    Fold Change: -0.2257
    Cell Significance Index: -6.4700
  • Cell Name: epithelial cell of stomach (CL0002178)
    Fold Change: -0.2271
    Cell Significance Index: -26.4600
  • Cell Name: pancreatic D cell (CL0000173)
    Fold Change: -0.2357
    Cell Significance Index: -49.6500
  • Cell Name: fibroblast of dermis (CL0002551)
    Fold Change: -0.2661
    Cell Significance Index: -5.5700
  • Cell Name: lung endothelial cell (CL1001567)
    Fold Change: -0.2669
    Cell Significance Index: -13.9000
  • Cell Name: Purkinje cell (CL0000121)
    Fold Change: -0.2695
    Cell Significance Index: -5.9000
  • Cell Name: fallopian tube secretory epithelial cell (CL4030006)
    Fold Change: -0.2805
    Cell Significance Index: -4.3400
  • Cell Name: endothelial cell of placenta (CL0009092)
    Fold Change: -0.2805
    Cell Significance Index: -1.7000
  • Cell Name: pancreatic ductal cell (CL0002079)
    Fold Change: -0.3056
    Cell Significance Index: -35.0100
  • Cell Name: CD14-positive, CD16-negative classical monocyte (CL0002057)
    Fold Change: -0.3219
    Cell Significance Index: -5.9500
  • Cell Name: mesenchymal cell (CL0008019)
    Fold Change: -0.3277
    Cell Significance Index: -5.4900
  • Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
    Fold Change: -0.3660
    Cell Significance Index: -38.1100
  • Cell Name: transit amplifying cell of colon (CL0009011)
    Fold Change: -0.3747
    Cell Significance Index: -12.0000
  • Cell Name: acinar cell of salivary gland (CL0002623)
    Fold Change: -0.3774
    Cell Significance Index: -17.6000
  • Cell Name: cortical cell of adrenal gland (CL0002097)
    Fold Change: -0.4045
    Cell Significance Index: -10.8400
  • Cell Name: umbrella cell of urothelium (CL4030056)
    Fold Change: -0.4414
    Cell Significance Index: -4.0700
  • Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
    Fold Change: -0.5240
    Cell Significance Index: -41.5000
  • Cell Name: GABAergic amacrine cell (CL4030027)
    Fold Change: -0.5805
    Cell Significance Index: -7.2000
  • Cell Name: type I muscle cell (CL0002211)
    Fold Change: -0.6324
    Cell Significance Index: -15.4300
  • Cell Name: leptomeningeal cell (CL0000708)
    Fold Change: -0.6924
    Cell Significance Index: -14.8000
  • Cell Name: intestinal epithelial cell (CL0002563)
    Fold Change: -0.7332
    Cell Significance Index: -7.5900
  • Cell Name: intestinal tuft cell (CL0019032)
    Fold Change: -0.7646
    Cell Significance Index: -46.8800
  • Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
    Fold Change: -0.8440
    Cell Significance Index: -26.8800
  • Cell Name: L6b glutamatergic cortical neuron (CL4023038)
    Fold Change: -0.8497
    Cell Significance Index: -27.8200
  • Cell Name: cardiac muscle cell (CL0000746)
    Fold Change: -0.8589
    Cell Significance Index: -12.6800
  • Cell Name: hippocampal pyramidal neuron (CL1001571)
    Fold Change: -0.8708
    Cell Significance Index: -24.8500

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Other Information

**Key Characteristics:** 1. **Cytosolic localization**: The NT5C3A gene product is localized in the cytosol, where it can interact with various cellular components and influence metabolic pathways. 2. **Nucleotide catabolism**: The enzyme catalyzes the conversion of nucleotides into nucleosides, which is essential for the synthesis of RNA and DNA. 3. **5'-nucleotidase activity**: The NT5C3A gene product exhibits 5'-nucleotidase activity, which is involved in the hydrolysis of nucleotides to produce nucleosides. 4. **Expression in various cell types**: The NT5C3A gene is expressed in a wide range of cell types, including hematopoietic cells, smooth muscle fibers, and immune cells, indicating its potential role in cellular metabolism and immune response. **Pathways and Functions:** 1. **Nucleotide metabolism**: The NT5C3A gene product plays a crucial role in the conversion of nucleotides into nucleosides, which are essential components of RNA and DNA synthesis. 2. **5'-nucleotidase activity**: The enzyme exhibits 5'-nucleotidase activity, which is involved in the hydrolysis of nucleotides to produce nucleosides. 3. **Defense response to virus**: The NT5C3A gene product may be involved in the defense response to viral infections, as it is expressed in immune cells such as mast cells and T cells. 4. **Cell growth and differentiation**: The enzyme may also influence cell growth and differentiation, as it is expressed in various cell types, including hematopoietic cells and smooth muscle fibers. **Clinical Significance:** 1. **Cancer research**: The NT5C3A gene product has been implicated in cancer research, as it is overexpressed in certain types of cancer, including leukemia and lymphoma. 2. **Neurological disorders**: The enzyme may also be involved in neurological disorders, such as Alzheimer's disease and Parkinson's disease, where nucleotide metabolism is impaired. 3. **Immunological disorders**: The NT5C3A gene product may play a role in immunological disorders, such as autoimmune diseases and allergies, where immune cells are involved. 4. **Pharmacological applications**: The enzyme may be a target for pharmacological interventions, as it is involved in various cellular processes, including nucleotide metabolism and immune response. In conclusion, the NT5C3A gene encodes for the cytosolic IIIA isoform of 5'-nucleotidase, an enzyme playing a crucial role in nucleotide metabolism and immune response. The gene's expression pattern and its involvement in various cellular processes make it a potential target for research and therapeutic interventions in cancer, neurological disorders, immunological disorders, and pharmacological applications.

Genular Protein ID: 2279320037

Symbol: 5NT3A_HUMAN

Name: Cytosolic 5'-nucleotidase 3

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 10942414

Title: Human erythrocyte pyrimidine 5'-nucleotidase, PN-I, is identical to p36, a protein associated to lupus inclusion formation in response to alpha-interferon.

PubMed ID: 10942414

PubMed ID: 11369620

Title: Genetic basis of hemolytic anemia caused by pyrimidine 5' nucleotidase deficiency.

PubMed ID: 11369620

DOI: 10.1182/blood.v97.11.3327

PubMed ID: 11230166

Title: Towards a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs.

PubMed ID: 11230166

DOI: 10.1101/gr.gr1547r

PubMed ID: 14702039

Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.

PubMed ID: 14702039

DOI: 10.1038/ng1285

PubMed ID: 12853948

Title: The DNA sequence of human chromosome 7.

PubMed ID: 12853948

DOI: 10.1038/nature01782

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 11042152

Title: Cloning and functional analysis of cDNAs with open reading frames for 300 previously undefined genes expressed in CD34+ hematopoietic stem/progenitor cells.

PubMed ID: 11042152

DOI: 10.1101/gr.140200

PubMed ID: 8557639

Title: Purification, microsequencing, and immunolocalization of p36, a new interferon-alpha-induced protein that is associated with human lupus inclusions.

PubMed ID: 8557639

DOI: 10.1074/jbc.271.2.1118

PubMed ID: 15604219

Title: Functional analysis of pyrimidine 5'-nucleotidase mutants causing nonspherocytic hemolytic anemia.

PubMed ID: 15604219

DOI: 10.1182/blood-2004-10-3895

PubMed ID: 15968458

Title: Evidence for essential catalytic determinants for human erythrocyte pyrimidine 5'-nucleotidase.

PubMed ID: 15968458

DOI: 10.1007/s00018-005-5135-y

PubMed ID: 21269460

Title: Initial characterization of the human central proteome.

PubMed ID: 21269460

DOI: 10.1186/1752-0509-5-17

PubMed ID: 22814378

Title: N-terminal acetylome analyses and functional insights of the N-terminal acetyltransferase NatB.

PubMed ID: 22814378

DOI: 10.1073/pnas.1210303109

PubMed ID: 24603684

Title: Crystal structures of the novel cytosolic 5'-nucleotidase IIIB explain its preference for m7GMP.

PubMed ID: 24603684

DOI: 10.1371/journal.pone.0090915

PubMed ID: 17405878

Title: Crystal structure of human cytosolic 5'-nucleotidase II: insights into allosteric regulation and substrate recognition.

PubMed ID: 17405878

DOI: 10.1074/jbc.m700917200

PubMed ID: 12930399

Title: Molecular characterization of six unrelated Italian patients affected by pyrimidine 5'-nucleotidase deficiency.

PubMed ID: 12930399

DOI: 10.1046/j.1365-2141.2003.04532.x

PubMed ID: 15238149

Title: Molecular basis of Japanese variants of pyrimidine 5'-nucleotidase deficiency.

PubMed ID: 15238149

DOI: 10.1111/j.1365-2141.2004.05029.x

PubMed ID: 16461318

Title: Molecular characterization of five Portuguese patients with pyrimidine 5'-nucleotidase deficient hemolytic anemia showing three new P5'N-I mutations.

PubMed ID: 16461318

PubMed ID: 18499901

Title: Molecular basis of pyrimidine 5'-nucleotidase deficiency caused by 3 newly identified missense mutations (c.187T>C, c.469G>C and c.740T>C) and a tabulation of known mutations.

PubMed ID: 18499901

DOI: 10.1016/j.bcmd.2007.10.005

PubMed ID: 25153905

Title: Pyrimidine-5'-nucleotidase Campinas, a new mutation (p.R56G) in the NT5C3 gene associated with pyrimidine-5'-nucleotidase type I deficiency and influence of Gilbert's Syndrome on clinical expression.

PubMed ID: 25153905

DOI: 10.1016/j.bcmd.2014.05.009

Sequence Information:

  • Length: 336
  • Mass: 37948
  • Checksum: C5D75CCF1BB61021
  • Sequence:
  • MRAPSMDRAA VARVGAVASA SVCALVAGVV LAQYIFTLKR KTGRKTKIIE MMPEFQKSSV 
    RIKNPTRVEE IICGLIKGGA AKLQIITDFD MTLSRFSYKG KRCPTCHNII DNCKLVTDEC 
    RKKLLQLKEK YYAIEVDPVL TVEEKYPYMV EWYTKSHGLL VQQALPKAKL KEIVAESDVM 
    LKEGYENFFD KLQQHSIPVF IFSAGIGDVL EEVIRQAGVY HPNVKVVSNF MDFDETGVLK 
    GFKGELIHVF NKHDGALRNT EYFNQLKDNS NIILLGDSQG DLRMADGVAN VEHILKIGYL 
    NDRVDELLEK YMDSYDIVLV QDESLEVANS ILQKIL

Genular Protein ID: 2680588104

Symbol: A0A090N7U2_HUMAN

Name: N/A

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 12690205

Title: Human chromosome 7: DNA sequence and biology.

PubMed ID: 12690205

DOI: 10.1126/science.1083423

Sequence Information:

  • Length: 285
  • Mass: 32559
  • Checksum: CB3B6812C90A5578
  • Sequence:
  • MPEFQKSSVR IKNPTRVEEI ICGLIKGGAA KLQIITDFDM TLSRFSYKGK RCPTCHNIID 
    NCKLVTDECR KKLLQLKEKY YAIEVDPVLT VEEKYPYMVE WYTKSHGLLV QQALPKAKLK 
    EIVAESDVML KEGYENFFDK LQQHSIPVFI FSAGIGDVLE EVIRQAGVYH PNVKVVSNFM 
    DFDETGVLKG FKGELIHVFN KHDGALRNTE YFNQLKDNSN IILLGDSQGD LRMADGVANV 
    EHILKIGYLN DRVDELLEKY MDSYDIVLVQ DESLEVANSI LQKIL

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.