Details for: TRAPPC4
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: polychromatophilic erythroblast (CL0000550)
Fold Change: 191.9056
Cell Significance Index: -29.8500 - Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
Fold Change: 130.3602
Cell Significance Index: -33.0700 - Cell Name: smooth muscle fiber of ileum (CL1000278)
Fold Change: 90.4214
Cell Significance Index: -42.6900 - Cell Name: embryonic stem cell (CL0002322)
Fold Change: 87.4626
Cell Significance Index: -36.0300 - Cell Name: mucosal type mast cell (CL0000485)
Fold Change: 83.4939
Cell Significance Index: -33.9200 - Cell Name: peripheral blood mononuclear cell (CL2000001)
Fold Change: 75.7409
Cell Significance Index: -38.9600 - Cell Name: ileal goblet cell (CL1000326)
Fold Change: 63.8205
Cell Significance Index: -42.8300 - Cell Name: ciliated cell of the bronchus (CL0002332)
Fold Change: 35.7793
Cell Significance Index: -34.1600 - Cell Name: orthochromatic erythroblast (CL0000552)
Fold Change: 29.9119
Cell Significance Index: -36.8800 - Cell Name: CD8-alpha-beta-positive, alpha-beta intraepithelial T cell (CL0000796)
Fold Change: 9.9072
Cell Significance Index: -26.5400 - Cell Name: stromal cell of bone marrow (CL0010001)
Fold Change: 9.7769
Cell Significance Index: -38.5800 - Cell Name: CD8-positive, alpha-beta regulatory T cell (CL0000795)
Fold Change: 7.0748
Cell Significance Index: -21.7300 - Cell Name: epidermal Langerhans cell (CL0002457)
Fold Change: 3.9021
Cell Significance Index: -8.5400 - Cell Name: epithelial cell of stomach (CL0002178)
Fold Change: 2.0893
Cell Significance Index: 243.4800 - Cell Name: granulosa cell (CL0000501)
Fold Change: 2.0700
Cell Significance Index: 54.4300 - Cell Name: microcirculation associated smooth muscle cell (CL0008035)
Fold Change: 1.9858
Cell Significance Index: 16.6800 - Cell Name: gut absorptive cell (CL0000677)
Fold Change: 1.9306
Cell Significance Index: 115.9000 - Cell Name: basal cell of prostate epithelium (CL0002341)
Fold Change: 1.1213
Cell Significance Index: 30.5200 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: 0.8613
Cell Significance Index: 105.9000 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: 0.8358
Cell Significance Index: 52.6800 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: 0.8045
Cell Significance Index: 110.4800 - Cell Name: endothelial cell of venule (CL1000414)
Fold Change: 0.7975
Cell Significance Index: 9.0600 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: 0.7950
Cell Significance Index: 41.3000 - Cell Name: cell in vitro (CL0001034)
Fold Change: 0.7616
Cell Significance Index: 415.9100 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: 0.6806
Cell Significance Index: 122.6900 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: 0.6643
Cell Significance Index: 34.8800 - Cell Name: sebum secreting cell (CL0000317)
Fold Change: 0.6144
Cell Significance Index: 43.4500 - Cell Name: odontoblast (CL0000060)
Fold Change: 0.5871
Cell Significance Index: 75.2700 - Cell Name: hair follicular keratinocyte (CL2000092)
Fold Change: 0.5729
Cell Significance Index: 253.3000 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: 0.5486
Cell Significance Index: 25.5800 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: 0.5406
Cell Significance Index: 40.2900 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: 0.5138
Cell Significance Index: 24.1500 - Cell Name: umbrella cell of urothelium (CL4030056)
Fold Change: 0.5077
Cell Significance Index: 4.6800 - Cell Name: microfold cell of epithelium of small intestine (CL1000353)
Fold Change: 0.4999
Cell Significance Index: 34.5700 - Cell Name: CD4-positive, alpha-beta memory T cell, CD45RO-positive (CL0001204)
Fold Change: 0.4849
Cell Significance Index: 14.2400 - Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
Fold Change: 0.3978
Cell Significance Index: 13.8300 - Cell Name: colon goblet cell (CL0009039)
Fold Change: 0.3843
Cell Significance Index: 38.0200 - Cell Name: early pro-B cell (CL0002046)
Fold Change: 0.3795
Cell Significance Index: 24.4900 - Cell Name: tonsil germinal center B cell (CL2000006)
Fold Change: 0.3531
Cell Significance Index: 41.6500 - Cell Name: paneth cell of epithelium of small intestine (CL1000343)
Fold Change: 0.3065
Cell Significance Index: 6.6400 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 0.2987
Cell Significance Index: 59.9100 - Cell Name: enteroendocrine cell of colon (CL0009042)
Fold Change: 0.2174
Cell Significance Index: 41.3700 - Cell Name: fibroblast of dermis (CL0002551)
Fold Change: 0.1557
Cell Significance Index: 3.2600 - Cell Name: lactocyte (CL0002325)
Fold Change: 0.1547
Cell Significance Index: 19.9900 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 0.1421
Cell Significance Index: 50.9700 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 0.1363
Cell Significance Index: 27.0400 - Cell Name: GABAergic interneuron (CL0011005)
Fold Change: 0.1293
Cell Significance Index: 89.4400 - Cell Name: fibro/adipogenic progenitor cell (CL0009099)
Fold Change: 0.0691
Cell Significance Index: 3.4900 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: 0.0548
Cell Significance Index: 9.3600 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: 0.0208
Cell Significance Index: 39.1400 - Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
Fold Change: 0.0145
Cell Significance Index: 10.6400 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: 0.0063
Cell Significance Index: 4.7500 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: 0.0033
Cell Significance Index: 0.1500 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: 0.0026
Cell Significance Index: 0.0700 - Cell Name: fibroblast of mammary gland (CL0002555)
Fold Change: 0.0014
Cell Significance Index: 0.0400 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0134
Cell Significance Index: -9.9200 - Cell Name: anterior lens cell (CL0002223)
Fold Change: -0.0140
Cell Significance Index: -25.8700 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: -0.0188
Cell Significance Index: -29.0200 - Cell Name: mesenchymal cell (CL0008019)
Fold Change: -0.0254
Cell Significance Index: -0.4300 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: -0.0255
Cell Significance Index: -34.7000 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.0294
Cell Significance Index: -3.0000 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: -0.0297
Cell Significance Index: -0.8600 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: -0.0329
Cell Significance Index: -20.8900 - Cell Name: pancreatic PP cell (CL0002275)
Fold Change: -0.0360
Cell Significance Index: -22.4900 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.0474
Cell Significance Index: -5.4400 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0481
Cell Significance Index: -27.1500 - Cell Name: transit amplifying cell of colon (CL0009011)
Fold Change: -0.0546
Cell Significance Index: -1.7500 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: -0.0618
Cell Significance Index: -28.0400 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.0856
Cell Significance Index: -18.0200 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: -0.0988
Cell Significance Index: -2.7600 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: -0.1309
Cell Significance Index: -4.6000 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.1416
Cell Significance Index: -40.7300 - Cell Name: peg cell (CL4033014)
Fold Change: -0.1456
Cell Significance Index: -3.3700 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: -0.1559
Cell Significance Index: -22.6600 - Cell Name: helper T cell (CL0000912)
Fold Change: -0.1562
Cell Significance Index: -2.2200 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: -0.1823
Cell Significance Index: -29.6500 - Cell Name: neuron associated cell (CL0000095)
Fold Change: -0.1926
Cell Significance Index: -7.8900 - Cell Name: pro-T cell (CL0000827)
Fold Change: -0.2071
Cell Significance Index: -5.2900 - Cell Name: pancreatic endocrine cell (CL0008024)
Fold Change: -0.2143
Cell Significance Index: -24.4600 - Cell Name: kidney cell (CL1000497)
Fold Change: -0.2680
Cell Significance Index: -2.1400 - Cell Name: lung endothelial cell (CL1001567)
Fold Change: -0.2895
Cell Significance Index: -15.0800 - Cell Name: cerebellar granule cell (CL0001031)
Fold Change: -0.3119
Cell Significance Index: -5.3500 - Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
Fold Change: -0.3172
Cell Significance Index: -25.1200 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: -0.3498
Cell Significance Index: -36.4200 - Cell Name: skeletal muscle myoblast (CL0000515)
Fold Change: -0.3836
Cell Significance Index: -4.1700 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: -0.3872
Cell Significance Index: -29.7200 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: -0.3928
Cell Significance Index: -22.0400 - Cell Name: retinal rod cell (CL0000604)
Fold Change: -0.4287
Cell Significance Index: -5.1100 - Cell Name: intestinal epithelial cell (CL0002563)
Fold Change: -0.4333
Cell Significance Index: -4.4900 - Cell Name: neutrophil progenitor cell (CL0000834)
Fold Change: -0.4471
Cell Significance Index: -11.9600 - Cell Name: thyroid follicular cell (CL0002258)
Fold Change: -0.4640
Cell Significance Index: -4.9300 - Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
Fold Change: -0.4879
Cell Significance Index: -10.3900 - Cell Name: enteroendocrine cell of small intestine (CL0009006)
Fold Change: -0.6307
Cell Significance Index: -15.7700 - Cell Name: Purkinje cell (CL0000121)
Fold Change: -0.6419
Cell Significance Index: -14.0600 - Cell Name: Sertoli cell (CL0000216)
Fold Change: -0.6463
Cell Significance Index: -9.0700 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: -0.6487
Cell Significance Index: -8.8500 - Cell Name: kidney epithelial cell (CL0002518)
Fold Change: -0.6512
Cell Significance Index: -19.1800 - Cell Name: skeletal muscle fiber (CL0008002)
Fold Change: -0.6617
Cell Significance Index: -17.0100 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: -0.6749
Cell Significance Index: -41.3800 - Cell Name: paneth cell of colon (CL0009009)
Fold Change: -0.7435
Cell Significance Index: -11.1400
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 4189206053
Symbol: TPPC4_HUMAN
Name: Hematopoietic stem/progenitor cell protein 172
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 11042152
Title: Cloning and functional analysis of cDNAs with open reading frames for 300 previously undefined genes expressed in CD34+ hematopoietic stem/progenitor cells.
PubMed ID: 11042152
DOI: 10.1101/gr.140200
PubMed ID: 10810093
Title: Identification of novel human genes evolutionarily conserved in Caenorhabditis elegans by comparative proteomics.
PubMed ID: 10810093
DOI: 10.1101/gr.10.5.703
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 16554811
Title: Human chromosome 11 DNA sequence and analysis including novel gene identification.
PubMed ID: 16554811
DOI: 10.1038/nature04632
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 11805826
Title: Functional organization of the yeast proteome by systematic analysis of protein complexes.
PubMed ID: 11805826
DOI: 10.1038/415141a
PubMed ID: 19416478
Title: TRAPPC2L is a novel, highly conserved TRAPP-interacting protein.
PubMed ID: 19416478
PubMed ID: 21269460
Title: Initial characterization of the human central proteome.
PubMed ID: 21269460
PubMed ID: 21525244
Title: C4orf41 and TTC-15 are mammalian TRAPP components with a role at an early stage in ER-to-Golgi trafficking.
PubMed ID: 21525244
PubMed ID: 31794024
Title: Deficiencies in vesicular transport mediated by TRAPPC4 are associated with severe syndromic intellectual disability.
PubMed ID: 31794024
DOI: 10.1093/brain/awz374
Sequence Information:
- Length: 219
- Mass: 24340
- Checksum: C6ADE525B7CFB731
- Sequence:
MAIFSVYVVN KAGGLIYQLD SYAPRAEAEK TFSYPLDLLL KLHDERVLVA FGQRDGIRVG HAVLAINGMD VNGRYTADGK EVLEYLGNPA NYPVSIRFGR PRLTSNEKLM LASMFHSLFA IGSQLSPEQG SSGIEMLETD TFKLHCYQTL TGIKFVVLAD PRQAGIDSLL RKIYEIYSDF ALKNPFYSLE MPIRCELFDQ NLKLALEVAE KAGTFGPGS
Genular Protein ID: 2846534611
Symbol: E9PQE8_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 11237011
Title: Initial sequencing and analysis of the human genome.
PubMed ID: 11237011
DOI: 10.1038/35057062
PubMed ID: 15496913
Title: Finishing the euchromatic sequence of the human genome.
PubMed ID: 15496913
DOI: 10.1038/nature03001
PubMed ID: 16554811
Title: Human chromosome 11 DNA sequence and analysis including novel gene identification.
PubMed ID: 16554811
DOI: 10.1038/nature04632
PubMed ID: 21269460
Title: Initial characterization of the human central proteome.
PubMed ID: 21269460
Sequence Information:
- Length: 176
- Mass: 19483
- Checksum: 1D40F30334E5182F
- Sequence:
MAIFSVYVVN KAGGLIYQLD SYAPRAEAEK TFSYPLDLLL KLHDERVLVA FGQRDGIRVG HAVLAINGMD VNGRLFAIGS QLSPEQGSSG IEMLETDTFK LHCYQTLTGI KFVVLADPRQ AGIDSLLRKI YEIYSDFALK NPFYSLEMPI RCELFDQNLK LALEVAEKAG TFGPGS
Genular Protein ID: 3107634260
Symbol: E9PKS9_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 11237011
Title: Initial sequencing and analysis of the human genome.
PubMed ID: 11237011
DOI: 10.1038/35057062
PubMed ID: 15496913
Title: Finishing the euchromatic sequence of the human genome.
PubMed ID: 15496913
DOI: 10.1038/nature03001
PubMed ID: 16554811
Title: Human chromosome 11 DNA sequence and analysis including novel gene identification.
PubMed ID: 16554811
DOI: 10.1038/nature04632
PubMed ID: 21269460
Title: Initial characterization of the human central proteome.
PubMed ID: 21269460
Sequence Information:
- Length: 126
- Mass: 14150
- Checksum: E44CC4EA3C0A8B91
- Sequence:
MAIFSVYVVN KAGGLIYQLD SYAPRAEAEK TFSYPLDLLL KLHDERVLVA FGQRDGIRGI KFVVLADPRQ AGIDSLLRKI YEIYSDFALK NPFYSLEMPI RCELFDQNLK LALEVAEKAG TFGPGS
Genular Protein ID: 748024217
Symbol: J3KP27_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 11237011
Title: Initial sequencing and analysis of the human genome.
PubMed ID: 11237011
DOI: 10.1038/35057062
PubMed ID: 15496913
Title: Finishing the euchromatic sequence of the human genome.
PubMed ID: 15496913
DOI: 10.1038/nature03001
PubMed ID: 16554811
Title: Human chromosome 11 DNA sequence and analysis including novel gene identification.
PubMed ID: 16554811
DOI: 10.1038/nature04632
PubMed ID: 21269460
Title: Initial characterization of the human central proteome.
PubMed ID: 21269460
Sequence Information:
- Length: 181
- Mass: 19996
- Checksum: 911B54A749F791F4
- Sequence:
MAIFSVYVVN KAGGLIYQLD SYAPRAEAEK TFSYPLDLLL KLHDERVLVA FGQRDGIRVG HAVLAINGMD VNGRYTADGK EVLEYLGNPA NYPVSIRFGR PRLTSNEKLM LASMFHSLFA IGSQLSPEQG SSGIEMLETD TFKLHCYQTL TEMPIRCELF DQNLKLALEV AEKAGTFGPG S
Genular Protein ID: 1517681883
Symbol: B4DF86_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Sequence Information:
- Length: 181
- Mass: 20074
- Checksum: 80EB54BA980E5D10
- Sequence:
MAIFSVYVVN KAGGLIYQLD SYAPRAEAEK TFSYPLDLLL KLHDERVLVA FGQRYSIRVG HAVLAINGMD VNGRYTADGK EVLEYLGNPA NYPVSIRFGR PRLTSNEKLM LASMFHSLFA IGSQLSPEQG SSGIEMLETD TFKLHCYQTL TEMPIRCELF DQNLKLALEV AEKAGTFGPG S
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.